Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003524

Physical Location & Seq

Genomic Coordinates Reverse (-)

21815861 .. 21825903

Gene Structure 10043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00399810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGCAAAGTTAGCCAAAGAGGCTACAACAATAAGACGTGTCCTGGAATCTTTGTTCCGCTACTTTGATAACGAAAACTTGTGGTCTCTTGAACATGGGCTTGCCATCTCAGTCTTAAAGGATATACAATTCTTAATGGAGAATTCTGGGCAAAATACCCATGTTTTGCTATCCATCTTAATCAAGCATCTCGACCACAAAAATGTCCTTAAACAACCCAACATGCAGCTTGACATAGTGGAGGTAACTACCTCCCTCGCTCTACATGCCAAGGTTGAACCTTCTGTAGCAATAATTGGGGCTTTAAGTGATGCCTTGAGGCATTTGAGAAAGAGCATTCACTGCTCTCTGGATGATGCCAATCTCGGGACAGATGTCATCAAATGGAACAAATGCTTTAGAGAAGAGGTGGATAAGTGCCTTGTACAGCTATCATATAAGATCGGAGAACCAGGACCAATTCTTGATGCTATGGCTGTTATGCTGGAGAATATTTCAACTATTACAGTGATAGCCAGAACTACAATTGCTGCTATTTATCGTACTGCTCAAATTGTAGCTTCCTTACCAAATTTTATTTGTGAAGAAGATGAAAACATTGTTCCGGAGGGGGAAGAAAGAGACACCAATAATGGGTTTCTGAGCAGATTGAAGTCATCTTATAGTCGGACATATAGTATGAAAAGCTTGCCTGCACCTTCAACACCAAATGAAAATTCCATGAGCAATACTAAGGAACTTGAGGCTAATTCCCTCAGGTTGAGCAGCCACCAGATAACTCTCTTGCTTTTATCAATTTTGGCACAATCCATCTCTCCTGGGAACATGCCTGAAAACTATGAAGCAATTGCTCATACCTACAGCCTTGTATTACTCTTCTCTCGGGCCAAGAATTCCTGCATTGAGGTTATTGTTCGAAGTTTTCAGCTGGCATTTTCCTTACGAAATATTTCTCTTATTGAAGGAGGTAAGCCCCACGGGCCATTGCCACCATCGCGTCGCAGGTCCCTGTTTACCCTGGCAACTTCAATGATTCTATTTTTATCAAAAGCATACAATTTTTTCTCTCTGGTTGATAGAGTCAAGGCAGCACTGACGGATAAAAAGGTTGATCCGTTCCTACATTTGGTTGAAGAGTACAAGTTACAGGCTGTTAAGGCTGGACCTGACCATCCCACATATCTCTATGGATCCAAGGAAGATGACAATTTGGCATTAAAATCTCTGTCACAAATAGTGATTACTGAAGAGCAGAGTAGGGAATCATTTGCTTCTGCAATTGTGAAGAGCTTGGACAATTTGTCAGAATCTGAATTGTCTTCTATAAAGGAGGAGTTGCTCAATGATTTCATACCTGATGATATCTGTCCACTAGGAGCACAATTGTTCACGGAAGCTCCGAAAAAACTTTATCAGGTTGATTTCACAAATAGCGAATCTATTAAGGAGGATGCTCCATTATTTTCAATGGAAGATGATTCTGTTCCAGGCTCGTCCAATAGCCACCAGAACAGTGTAGAGTTGTCTATGGATCTTCCCATTCTTTTGAATGTTAATCAACTAATGGAATCGGTCCAGGAGACAGCAAATCAAGTTGGAAGGTTTTCAGTCTCAACTAAACCTGATGTGTCTTACAAGGAAATGGCCGGCCACTGTGAGGCACTTCTGCTAGGAAAGCAGCAGAAGATGTCCAAGTTCATGAGTTCTCAAAAGAAAGAGGAATGTTTGATGAACTTCTCTTTACAAAATCATAATGACGACCTGCAAGAGACAACGCCCGATTCTTATATTGGCGTGGGTTCCCATAGGAGCGGTAATGCTTTTGCTGACCACACTGCCACTTCATACAAACTACCACCAACCCCAGGCCATGTCCCAATGCTTTGTGCAGCGGAATACCAGCATAATCCCCACTCCTCCTTCAGACTACCAGCCTCAAATCCATATGATAACTTCCTAAAAGCTGCCGGTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

658

Amino Acids

73.14

Weight (kDa)

5.61

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003524)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41830 AT2G41830
fragaria_vesca	FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620
malus_domestica	MD12G1077200.v1.1 MD14G1070800.v1.1
prunus_persica	Prupe.7G063500_v2.0.a1 Prupe.7G063500_v2.0.a1
pyrus_communis	pycom12g06250 pycom14g06020
rosa_chinensis	RchiOBHm_Chr3g0481871
rosa_laevigata	RLG00000023380
rosa_multiflora	Rmu_ssc0000267.1_g000017
rosa_roxburghii	Rroxscaffold_6G00399810 Rroxscaffold_6G00400140
rosa_rugosa	Rorug03G0194100 Rorug03G0194200
rosa_samantha	Rh1AG268100 Rh3AG245100 Rh3BG280300 Rh3CG275200 Rh3CG275600 Rh3CG276300 Rh3CG276400 Rh4CG314400
rosa_wichuraiana	Rw0G004350 Rw3G021880 Rw3G021900 Rw3G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	993, 1770
AccBSI	CCGCTC	1 cut(s)	1812
AccII	CGCG	1 cut(s)	997
AccIII	TCCGGA	1 cut(s)	604
AciI	CCGC	3 cut(s)	58, 1812, 1892
AclWI	GGATC	4 cut(s)	1106, 1185, 1198, 1539
AcoI	YGGCCR	2 cut(s)	1644, 1648
AcsI	RAATTY	4 cut(s)	142, 571, 715, 892
AcuI	CTGAAG	2 cut(s)	1266, 1906
AfaI	GTAC	3 cut(s)	426, 544, 1139
AfiI	CCNNNNNNNGG	5 cut(s)	366, 633, 1126, 1657, 1865
AflIII	ACRYGT	1 cut(s)	37
AhdI	GACNNNNNGTC	1 cut(s)	1300
AjiI	CACGTC	1 cut(s)	38
AjnI	CCWGG	7 cut(s)	42, 451, 817, 1017, 1486, 1575, 1864
AjuI	GAANNNNNNNTTGG	2 cut(s)	700, 732
AloI	GAACNNNNNNTCC	2 cut(s)	38, 70
AluBI	AGCT	8 cut(s)	229, 430, 560, 687, 928, 1290, 1397, 1964
AluI	AGCT	8 cut(s)	229, 430, 560, 687, 928, 1290, 1397, 1964
Alw21I	GWGCWC	1 cut(s)	1381
Alw26I	GTCTC	5 cut(s)	90, 615, 1574, 1615, 1763
AlwI	GGATC	4 cut(s)	1106, 1185, 1198, 1539
AlwNI	CAGNNNCTG	1 cut(s)	1310
Ama87I	CYCGRG	2 cut(s)	365, 882
Aor13HI	TCCGGA	1 cut(s)	604
AoxI	GGCC	5 cut(s)	885, 980, 1644, 1648, 1867
ApeKI	GCWGC	7 cut(s)	226, 530, 765, 1088, 1678, 1889, 1964
ApoI	RAATTY	4 cut(s)	142, 571, 715, 892
Asp700I	GAANNNNTTC	2 cut(s)	949, 1603
AspS9I	GGNCC	6 cut(s)	455, 885, 980, 1005, 1163, 1573
AsuII	TTCGAA	1 cut(s)	916
AvaI	CYCGRG	2 cut(s)	365, 882
AvaII	GGWCC	4 cut(s)	455, 1005, 1163, 1573
AxyI	CCTNAGG	1 cut(s)	755
BamHI	GGATCC	1 cut(s)	1190
BbsI	GAAGAC	1 cut(s)	1311
Bbv12I	GWGCWC	1 cut(s)	1381
BbvI	GCAGC	7 cut(s)	238, 517, 777, 1100, 1690, 1901, 1951
BccI	CCATC	5 cut(s)	113, 182, 818, 1000, 1179
BciT130I	CCWGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
BcoDI	GTCTC	5 cut(s)	90, 615, 1574, 1615, 1763
BfaI	CTAG	2 cut(s)	1373, 1670
BfmI	CTRYAG	2 cut(s)	285, 859
BfuAI	ACCTGC	2 cut(s)	993, 1770
BglI	GCCNNNNNGGC	2 cut(s)	20, 979
BisI	GCNGC	7 cut(s)	227, 531, 766, 1089, 1679, 1890, 1965
BlsI	GCNGC	7 cut(s)	228, 532, 767, 1090, 1680, 1891, 1966
Bme1390I	CCNGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
Bme18I	GGWCC	4 cut(s)	455, 1005, 1163, 1573
BmeRI	GACNNNNNGTC	1 cut(s)	1300
BmeT110I	CYCGRG	2 cut(s)	365, 882
BmgBI	CACGTC	1 cut(s)	38
BmgT120I	GGNCC	6 cut(s)	455, 885, 980, 1005, 1163, 1573
BmiI	GGNNCC	3 cut(s)	1007, 1192, 1801
BmrFI	CCNGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
BmsI	GCATC	5 cut(s)	196, 301, 346, 457, 1441
BoxI	GACNNNNGTC	1 cut(s)	374
BpiI	GAAGAC	1 cut(s)	1311
BpmI	CTGGAG	1 cut(s)	506
Bpu14I	TTCGAA	1 cut(s)	916
BpuEI	CTTGAG	2 cut(s)	337, 761
BsaBI	GATNNNNATC	1 cut(s)	360
BsaI	GGTCTC	1 cut(s)	90
BsaJI	CCNNGG	6 cut(s)	270, 818, 976, 1017, 1194, 1864
BsaWI	WCCGGW	1 cut(s)	604
BsaXI	ACNNNNNCTCC	2 cut(s)	1381, 1411
Bsc4I	CCNNNNNNNGG	5 cut(s)	366, 633, 1126, 1657, 1865
Bse118I	RCCGGY	2 cut(s)	1646, 1967
Bse21I	CCTNAGG	1 cut(s)	755
Bse3DI	GCAATG	1 cut(s)	983
Bse8I	GATNNNNATC	1 cut(s)	360
BseAI	TCCGGA	1 cut(s)	604
BseBI	CCWGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
BseDI	CCNNGG	6 cut(s)	270, 818, 976, 1017, 1194, 1864
BseGI	GGATG	3 cut(s)	358, 1171, 1456
BseJI	GATNNNNATC	1 cut(s)	360
BseLI	CCNNNNNNNGG	5 cut(s)	366, 633, 1126, 1657, 1865
BseMI	GCAATG	1 cut(s)	983
BseMII	CTCAG	3 cut(s)	123, 632, 769
BseRI	GAGGAG	2 cut(s)	1346, 1906
BseXI	GCAGC	7 cut(s)	238, 517, 777, 1100, 1690, 1901, 1951
BsgI	GTGCAG	2 cut(s)	678, 1908
Bsh1236I	CGCG	1 cut(s)	997
BshFI	GGCC	5 cut(s)	887, 982, 1646, 1650, 1869
BsiHKAI	GWGCWC	1 cut(s)	1381
BsiHKCI	CYCGRG	2 cut(s)	365, 882
BsiSI	CCGG	3 cut(s)	605, 1647, 1968
BslFI	GGGAC	3 cut(s)	382, 991, 1859
BslI	CCNNNNNNNGG	5 cut(s)	366, 633, 1126, 1657, 1865
BsmAI	GTCTC	5 cut(s)	90, 615, 1574, 1615, 1763
BsmFI	GGGAC	3 cut(s)	382, 991, 1859
BsmI	GAATGC	1 cut(s)	336
BsnI	GGCC	5 cut(s)	887, 982, 1646, 1650, 1869
Bso31I	GGTCTC	1 cut(s)	90
BsoBI	CYCGRG	2 cut(s)	365, 882
Bsp119I	TTCGAA	1 cut(s)	916
Bsp1286I	GDGCHC	1 cut(s)	1381
Bsp13I	TCCGGA	1 cut(s)	604
Bsp1407I	TGTACA	1 cut(s)	424
Bsp143I	GATC	4 cut(s)	441, 1111, 1190, 1531
BspACI	CCGC	3 cut(s)	58, 1812, 1892
BspANI	GGCC	5 cut(s)	887, 982, 1646, 1650, 1869
BspCNI	CTCAG	3 cut(s)	122, 633, 768
BspEI	TCCGGA	1 cut(s)	604
BspFNI	CGCG	1 cut(s)	997
BspHI	TCATGA	1 cut(s)	1698
BspLI	GGNNCC	3 cut(s)	1007, 1192, 1801
BspMI	ACCTGC	2 cut(s)	993, 1770
BspPI	GGATC	4 cut(s)	1106, 1185, 1198, 1539
BspQI	GCTCTTC	2 cut(s)	1242, 1280
BspT104I	TTCGAA	1 cut(s)	916
BspTNI	GGTCTC	1 cut(s)	90
BsrBI	CCGCTC	1 cut(s)	1812
BsrDI	GCAATG	1 cut(s)	983
BsrFI	RCCGGY	2 cut(s)	1646, 1967
BsrGI	TGTACA	1 cut(s)	424
BssAI	RCCGGY	2 cut(s)	1646, 1967
BssECI	CCNNGG	6 cut(s)	270, 818, 976, 1017, 1194, 1864
BssMI	GATC	4 cut(s)	441, 1111, 1190, 1531
BssT1I	CCWWGG	2 cut(s)	270, 1194
Bst2UI	CCWGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
Bst4CI	ACNGT	3 cut(s)	508, 1514, 1655
Bst6I	CTCTTC	5 cut(s)	399, 881, 1128, 1242, 1280
BstAPI	GCANNNNNTGC	1 cut(s)	342
BstAUI	TGTACA	1 cut(s)	424
BstBI	TTCGAA	1 cut(s)	916
BstC8I	GCNNGC	5 cut(s)	102, 689, 693, 930, 1648
BstDEI	CTNAG	4 cut(s)	109, 641, 732, 755
BstDSI	CCRYGG	1 cut(s)	976
BstF5I	GGATG	3 cut(s)	358, 1171, 1456
BstFNI	CGCG	1 cut(s)	997
BstKTI	GATC	4 cut(s)	444, 1114, 1193, 1534
BstMAI	GTCTC	5 cut(s)	90, 615, 1574, 1615, 1763
BstMBI	GATC	4 cut(s)	441, 1111, 1190, 1531
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 20, 266, 342, 979, 994, 1157, 1675
BstNI	CCWGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
BstNSI	RCATGY	3 cut(s)	226, 269, 829
BstPAI	GACNNNNGTC	1 cut(s)	374
BstSCI	CCNGG	7 cut(s)	42, 451, 817, 1017, 1486, 1575, 1864
BstSFI	CTRYAG	2 cut(s)	285, 859
BstUI	CGCG	1 cut(s)	997
BstV1I	GCAGC	7 cut(s)	238, 517, 777, 1100, 1690, 1901, 1951
BstV2I	GAAGAC	1 cut(s)	1311
BstX2I	RGATCY	2 cut(s)	1190, 1531
BstYI	RGATCY	2 cut(s)	1190, 1531
Bsu36I	CCTNAGG	1 cut(s)	755
BsuRI	GGCC	5 cut(s)	887, 982, 1646, 1650, 1869
BtgI	CCRYGG	1 cut(s)	976
BtgZI	GCGATG	1 cut(s)	978
BtrI	CACGTC	1 cut(s)	38
BtsCI	GGATG	3 cut(s)	358, 1171, 1456
BtsI	GCAGTG	2 cut(s)	340, 1833
BtsIMutI	CAGTG	6 cut(s)	340, 513, 1091, 1519, 1651, 1833
BveI	ACCTGC	2 cut(s)	993, 1770
Cac8I	GCNNGC	5 cut(s)	102, 689, 693, 930, 1648
CaiI	CAGNNNCTG	1 cut(s)	1310
CciI	TCATGA	1 cut(s)	1698
Cfr10I	RCCGGY	2 cut(s)	1646, 1967
Cfr13I	GGNCC	6 cut(s)	455, 885, 980, 1005, 1163, 1573
CseI	GACGC	1 cut(s)	986
Csp6I	GTAC	3 cut(s)	425, 543, 1138
CviAII	CATG	8 cut(s)	95, 161, 223, 266, 721, 826, 1699, 1871
CviQI	GTAC	3 cut(s)	425, 543, 1138
DdeI	CTNAG	4 cut(s)	109, 641, 732, 755
DpnI	GATC	4 cut(s)	443, 1113, 1192, 1533
DpnII	GATC	4 cut(s)	441, 1111, 1190, 1531
DriI	GACNNNNNGTC	1 cut(s)	1300
EaeI	YGGCCR	2 cut(s)	1644, 1648
Eam1104I	CTCTTC	5 cut(s)	399, 881, 1128, 1242, 1280
Eam1105I	GACNNNNNGTC	1 cut(s)	1300
EarI	CTCTTC	5 cut(s)	399, 881, 1128, 1242, 1280
Eco130I	CCWWGG	2 cut(s)	270, 1194
Eco31I	GGTCTC	1 cut(s)	90
Eco32I	GATATC	1 cut(s)	1363
Eco47I	GGWCC	4 cut(s)	455, 1005, 1163, 1573
Eco57I	CTGAAG	2 cut(s)	1266, 1906
Eco81I	CCTNAGG	1 cut(s)	755
Eco88I	CYCGRG	2 cut(s)	365, 882
EcoO109I	RGGNCCY	1 cut(s)	1005
EcoRI	GAATTC	2 cut(s)	142, 892
EcoRII	CCWGG	7 cut(s)	42, 451, 817, 1017, 1486, 1575, 1864
EcoRV	GATATC	1 cut(s)	1363
EcoT14I	CCWWGG	2 cut(s)	270, 1194
ErhI	CCWWGG	2 cut(s)	270, 1194
FaeI	CATG	8 cut(s)	98, 164, 226, 269, 724, 829, 1702, 1874
FaqI	GGGAC	3 cut(s)	382, 991, 1859
FatI	CATG	8 cut(s)	94, 160, 222, 265, 720, 825, 1698, 1870
FauNDI	CATATG	1 cut(s)	1945
Fnu4HI	GCNGC	7 cut(s)	227, 531, 766, 1089, 1679, 1890, 1965
FokI	GGATG	3 cut(s)	365, 1158, 1463
FseI	GGCCGGCC	1 cut(s)	1650
Fsp4HI	GCNGC	7 cut(s)	227, 531, 766, 1089, 1679, 1890, 1965
FspBI	CTAG	2 cut(s)	1373, 1670
GluI	GCNGC	7 cut(s)	227, 531, 766, 1089, 1679, 1890, 1965
GsuI	CTGGAG	1 cut(s)	506
HaeIII	GGCC	5 cut(s)	887, 982, 1646, 1650, 1869
HapII	CCGG	3 cut(s)	605, 1647, 1968
HgaI	GACGC	1 cut(s)	986
Hin1II	CATG	8 cut(s)	98, 164, 226, 269, 724, 829, 1702, 1874
HindIII	AAGCTT	1 cut(s)	685
HinfI	GANTC	9 cut(s)	47, 1033, 1080, 1262, 1307, 1436, 1478, 1568, 1781
HpaII	CCGG	3 cut(s)	605, 1647, 1968
Hpy166II	GTNNAC	3 cut(s)	1014, 1370, 1389
Hpy188I	TCNGA	7 cut(s)	446, 642, 669, 1306, 1312, 1401, 1925
Hpy188III	TCNNGA	7 cut(s)	89, 191, 350, 367, 464, 605, 1699
Hpy8I	GTNNAC	3 cut(s)	1014, 1370, 1389
Hpy99I	CGWCG	1 cut(s)	1002
HpyAV	CCTTC	5 cut(s)	291, 708, 956, 1593, 1930
HpyCH4III	ACNGT	3 cut(s)	508, 1514, 1655
HpyCH4IV	ACGT	1 cut(s)	37
HpyCH4V	TGCA	6 cut(s)	226, 695, 900, 1277, 1765, 1889
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 20, 266, 342, 979, 994, 1157, 1675
HpyF3I	CTNAG	4 cut(s)	109, 641, 732, 755
HpySE526I	ACGT	1 cut(s)	37
Hsp92II	CATG	8 cut(s)	98, 164, 226, 269, 724, 829, 1702, 1874
Kpn2I	TCCGGA	1 cut(s)	604
KroI	GCCGGC	1 cut(s)	1646
KroNI	GCCGGC	1 cut(s)	1648
Kzo9I	GATC	4 cut(s)	441, 1111, 1190, 1531
LguI	GCTCTTC	2 cut(s)	1242, 1280
LmnI	GCTCC	4 cut(s)	1376, 1402, 1459, 1809
Lsp1109I	GCAGC	7 cut(s)	238, 517, 777, 1100, 1690, 1901, 1951
LweI	GCATC	5 cut(s)	196, 301, 346, 457, 1441
MaeI	CTAG	2 cut(s)	1373, 1670
MaeII	ACGT	1 cut(s)	37
MaeIII	GTNAC	3 cut(s)	244, 1143, 1227
MalI	GATC	4 cut(s)	443, 1113, 1192, 1533
MbiI	CCGCTC	1 cut(s)	1812
MboI	GATC	4 cut(s)	441, 1111, 1190, 1531
MfeI	CAATTG	4 cut(s)	525, 846, 1278, 1382
MflI	RGATCY	2 cut(s)	1190, 1531
MhlI	GDGCHC	1 cut(s)	1381
MlyI	GAGTC	1 cut(s)	1089
MmeI	TCCRAC	2 cut(s)	647, 1576
MroI	TCCGGA	1 cut(s)	604
MroNI	GCCGGC	1 cut(s)	1646
MroXI	GAANNNNTTC	2 cut(s)	949, 1603
MseI	TTAA	9 cut(s)	116, 134, 179, 210, 305, 1155, 1217, 1443, 1554
MslI	CAYNNNNRTG	1 cut(s)	201
MspA1I	CMGCKG	2 cut(s)	928, 1892
MspI	CCGG	3 cut(s)	605, 1647, 1968
MspR9I	CCNGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
MunI	CAATTG	4 cut(s)	525, 846, 1278, 1382
Mva1269I	GAATGC	1 cut(s)	336
MvaI	CCWGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
MvnI	CGCG	1 cut(s)	997
MwoI	GCNNNNNNNGC	8 cut(s)	11, 20, 266, 342, 979, 994, 1157, 1675
NaeI	GCCGGC	1 cut(s)	1648
NdeI	CATATG	1 cut(s)	1945
NdeII	GATC	4 cut(s)	441, 1111, 1190, 1531
NgoMIV	GCCGGC	1 cut(s)	1646
NlaIII	CATG	8 cut(s)	98, 164, 226, 269, 724, 829, 1702, 1874
NlaIV	GGNNCC	3 cut(s)	1007, 1192, 1801
NmuCI	GTSAC	1 cut(s)	1227
NspI	RCATGY	3 cut(s)	226, 269, 829
NspV	TTCGAA	1 cut(s)	916
PagI	TCATGA	1 cut(s)	1698
PciSI	GCTCTTC	2 cut(s)	1242, 1280
PcsI	WCGNNNNNNNCGW	1 cut(s)	1397
PctI	GAATGC	1 cut(s)	336
PdiI	GCCGGC	1 cut(s)	1648
PdmI	GAANNNNTTC	2 cut(s)	949, 1603
PfeI	GAWTC	8 cut(s)	47, 1033, 1262, 1307, 1436, 1478, 1568, 1781
PfoI	TCCNGGA	2 cut(s)	42, 1575
PkrI	GCNGC	7 cut(s)	228, 532, 767, 1090, 1680, 1891, 1966
PleI	GAGTC	1 cut(s)	1088
PpsI	GAGTC	1 cut(s)	1088
PpuMI	RGGWCCY	1 cut(s)	1005
PshAI	GACNNNNGTC	1 cut(s)	374
Psp5II	RGGWCCY	1 cut(s)	1005
Psp6I	CCWGG	7 cut(s)	42, 451, 817, 1017, 1486, 1575, 1864
PspGI	CCWGG	7 cut(s)	42, 451, 817, 1017, 1486, 1575, 1864
PspN4I	GGNNCC	3 cut(s)	1007, 1192, 1801
PspPI	GGNCC	6 cut(s)	455, 885, 980, 1005, 1163, 1573
PspPPI	RGGWCCY	1 cut(s)	1005
PstNI	CAGNNNCTG	1 cut(s)	1310
PsuI	RGATCY	2 cut(s)	1190, 1531
PvuII	CAGCTG	1 cut(s)	928
RigI	GGCCGGCC	1 cut(s)	1650
RsaI	GTAC	3 cut(s)	426, 544, 1139
RsaNI	GTAC	3 cut(s)	425, 543, 1138
RseI	CAYNNNNRTG	1 cut(s)	201
SapI	GCTCTTC	2 cut(s)	1242, 1280
SaqAI	TTAA	9 cut(s)	116, 134, 179, 210, 305, 1155, 1217, 1443, 1554
SatI	GCNGC	7 cut(s)	227, 531, 766, 1089, 1679, 1890, 1965
Sau3AI	GATC	4 cut(s)	441, 1111, 1190, 1531
Sau96I	GGNCC	6 cut(s)	455, 885, 980, 1005, 1163, 1573
SchI	GAGTC	1 cut(s)	1089
ScrFI	CCNGG	7 cut(s)	44, 453, 819, 1019, 1488, 1577, 1866
SduI	GDGCHC	1 cut(s)	1381
SfaNI	GCATC	5 cut(s)	196, 301, 346, 457, 1441
SfcI	CTRYAG	2 cut(s)	285, 859
SfuI	TTCGAA	1 cut(s)	916
SinI	GGWCC	4 cut(s)	455, 1005, 1163, 1573
SmiMI	CAYNNNNRTG	1 cut(s)	201
SmlI	CTYRAG	2 cut(s)	316, 740
SmoI	CTYRAG	2 cut(s)	316, 740
SsiI	CCGC	3 cut(s)	58, 1812, 1892
SspI	AATATT	2 cut(s)	493, 949
SspMI	CTAG	2 cut(s)	1373, 1670
StyD4I	CCNGG	7 cut(s)	42, 451, 817, 1017, 1486, 1575, 1864
StyI	CCWWGG	2 cut(s)	270, 1194
TaaI	ACNGT	3 cut(s)	508, 1514, 1655
TaiI	ACGT	1 cut(s)	40
TaqI	TCGA	2 cut(s)	192, 916
TaqII	GACCGA	1 cut(s)	1561
TatI	WGTACW	2 cut(s)	424, 1137
TfiI	GAWTC	8 cut(s)	47, 1033, 1262, 1307, 1436, 1478, 1568, 1781
Tru1I	TTAA	9 cut(s)	116, 134, 179, 210, 305, 1155, 1217, 1443, 1554
Tru9I	TTAA	9 cut(s)	116, 134, 179, 210, 305, 1155, 1217, 1443, 1554
TscAI	CASTG	6 cut(s)	347, 513, 1098, 1519, 1658, 1840
TseFI	GTSAC	1 cut(s)	1227
TseI	GCWGC	7 cut(s)	226, 530, 765, 1088, 1678, 1889, 1964
Tsp45I	GTSAC	1 cut(s)	1227
TspDTI	ATGAA	8 cut(s)	606, 695, 726, 855, 1339, 1687, 1745, 1833
TspGWI	ACGGA	3 cut(s)	1104, 1112, 1406
TspRI	CASTG	6 cut(s)	347, 513, 1098, 1519, 1658, 1840
VpaK11BI	GGWCC	4 cut(s)	455, 1005, 1163, 1573
XapI	RAATTY	4 cut(s)	142, 571, 715, 892
XceI	RCATGY	3 cut(s)	226, 269, 829
XmnI	GAANNNNTTC	2 cut(s)	949, 1603
XspI	CTAG	2 cut(s)	1373, 1670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.