Rh3BG280300

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0003524
Physical Location & Seq
Forward (+)
27665216 .. 27675387
10172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG280300.1

Sequence Viewer

Length: 2466 bp
ATGAGCGCGGTTTCGGGTGTAGTGTCTCGCCAAGTTCTGCCTGCTTGCGGCAGTCTCTGCTTCTTTTGCCCCGGGCTGCGTGCCAGGTCCCGCCAGCCCGTCAAGAGGTACAAGAAGCTCATTGCTGATATTTTCCCCAAAAACCAGGAAGAAGGACCAAATGATCGGAAGATAGGAAAATTGTGTGAATATGCTGCTAAAAATCCTTTGCGGATTCCAAAGATCACAACCTCTCTTGAGCAAAGGTGTTACAAAGAATTGAGAAATGAGAATTTTCTATCCACAAAAATTGTCATGTGCATTTACAAGAAATTGCTGATAACTTGCAAGGAGCAAATGCCTCTCTTTGCGAGTAGCTTGCTCAGCATTATGCATACCCTTCTGGATCAATCACGCCAAGATGAAATGCAAATTATGGGATGCCAGACTCTTTTTGACTTTGTAAATAATCAGGTGGATGGAACATACATGTTTAACTTAGAAGGATTTATTCCGAAACTCTGTCAGATAGCTCAAGAGCCAGGGGAAGATGAAAGGGCAAATAATTTACGTTGTGCTGCACTGCAAGCCCTTTCTTCAATGGTTTGGTTTATGGGCGAGAATTCTCACATATCAGTCGAGTTCGATAATATTGTTGCAGTGGTCTTGGAAAACTATGGAGGTTTTAAGGAAGCTGAAGGTTCGCAGATTCAGTGGGTGCAGGAAGTTCAAAAAGATGAGGGTCATGTTTCTCCACAAGATGTCAGAATCAGGATTCCTCCTTGGAGTGCCATTGTGGATGCCAAAGGCGAACTAAAAGTATCAGAGGAAGATGCCAAGAACCTCTGTTTTTGGTCCAGGGTTTGCCTTCATAACATGGCAAAGTTAGCCAAAGAGGCTACAACAATAAGACGTGTCCTGGAATCTTTGTTCCGCTACTTTGATAATGAAAACTTGTGGTCTCTTGAACATGGGCTTGCCATCTCAGTCTTAAAGGATATACAATTCTTAATGGATAATTCTGGCCAAAATACCCATGTTTTGCTATCCATCTTAATCAAGCATCTCGACCACAAAAATGTCCTTAAACAACCCAACATGCAGCTTGACATAGTGGAGGTAACTACCTCCCTCGCTCTACATGCCAAGGTTGAACCCTCTGTAGCAATAATTGGGGCTTTAAGTGATGCCTTGAGGCATTTGAGAAAGAGCATCCACTGCTCTCTGGATGATGCCAATCTCGGGACAGATGTCATCAAATGGAACAAATGCTTTAGAGAAGAGGTGGATAAGTGCCTTGTACAGCTATCATATAAGATCGGAGAACCAGGACCAATTCTTGATGCTATGGCTGTTATGCTGGAGAATATTTCAACTATTACAGTGATAGCCAGAACTACAATTGCTGCTATTTATCGTACTGCTCAAATTGTAGCTTCCTTACCAAATTTGTCCTATCAAAACAAGGCTTTCCCAGAGGCATTGTTTCACCAATTACTCCCAGCTATGGTTCATCCAGACCATGAAACACGTGTTGGAGCTCATCGCATCTTCTCTGTTGTTCTTGTGCCATCTTCAGTTTCGCCTAATCTATTCTCATCTAATACCGAGACAAAAAAGGCCTTTGATCTTCACAGGACACTCTCAAGAACTGTCTCTGTGTTTTCTTCTTCAGCTGCCCTTTTTGAGAAGCTGAGGAGAGAGAAAATTTCCTCACGGGAAAGTATTTGTGAAGAAGATGAAAATATTGTTCCGGAGGGGGAAGAAAGAGACACCAATAATGGGTTTCTGAGCAGATTGAAGTCATCTTATAGTCGGACATATAGTATGAAAAGCTTTCCTGCACCTTCAACACCAAATGAAAATTCCATGAGCAATACTAAGGAACTTGAGGCTAATTCCCTCAGGTTGAGCAGCCACCAGATAACTCTCTTGCTTTTATCAATTTCGGCACAATCCATCTCTCCTGGGAACATGCCTGAAAACTATGAAGCAATTGCTCATACCTACAGCCTTGTATTACTCTTCTCTCGGGCCAAGAATTCCTGGATTGAGGTTCTTGTTCGAAGTTTTCAACTGGCATTTTCCTTACGAAATATCTCTCTTATTGAAGGAGGGCCATTGCCACCATCGCGTCGCAGGTCCCTGTTTACCCTGGCAACTTCAATGATTCTATTTTTATCAAAAGCATACAATTTTTTCTCTCTGGTTGATAGAGTCAAGGCAGCACTGACGGATAAAAAGGTTGATCCGTTCCTACATTTGGTTGAAGAGTACAAGTTACAGGCTGTTAAGGCTGGACGTGACCATCCCACATATCTCTATGGATCCAAGGAAGATGACAATTTGGCATTAAAATCTCTGTCACAAATAGTGATTACTGAAGAGCAGAGTAGGGAATCATTTGCTTCTGCAATTGTGAAGAGCTTGGACAATTTGTCAGAAGTAAGCCTCAAGACAATTAAAATGTGTTGGACCCATAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

821

Amino Acids

92.51

Weight (kDa)

8.01

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 69 - 158 5.1e-17 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2109
AccII CGCG 2 cut(s) 8, 2113
AccIII TCCGGA 1 cut(s) 1732
AciI CCGC 5 cut(s) 8, 48, 91, 211, 913
AclWI GGATC 4 cut(s) 393, 2222, 2301, 2314
AcoI YGGCCR 1 cut(s) 1003
AcsI RAATTY 6 cut(s) 271, 601, 1426, 1686, 1843, 2020
AcuI CTGAAG 4 cut(s) 696, 1539, 1635, 2382
AcvI CACGTG 1 cut(s) 1511
AfaI GTAC 4 cut(s) 110, 1281, 1399, 2255
AfiI CCNNNNNNNGG 6 cut(s) 47, 105, 1221, 1486, 1761, 2242
AflIII ACRYGT 4 cut(s) 468, 892, 1508, 1510
AhdI GACNNNNNGTC 1 cut(s) 2416
AjiI CACGTC 2 cut(s) 893, 2282
AjnI CCWGG 9 cut(s) 83, 144, 520, 836, 897, 1306, 1945, 2024, 2133
AjuI GAANNNNNNNTTGG 4 cut(s) 1497, 1529, 1828, 1860
AloI GAACNNNNNNTCC 2 cut(s) 893, 925
Alw21I GWGCWC 1 cut(s) 1522
Alw26I GTCTC 6 cut(s) 30, 59, 945, 1583, 1639, 1743
AlwI GGATC 4 cut(s) 393, 2222, 2301, 2314
AlwNI CAGNNNCTG 1 cut(s) 57
Ama87I CYCGRG 3 cut(s) 71, 1220, 2010
Aor13HI TCCGGA 1 cut(s) 1732
AoxI GGCC 4 cut(s) 1003, 1599, 2013, 2096
ApeKI GCWGC 8 cut(s) 76, 194, 557, 1081, 1385, 1655, 1893, 2204
ApoI RAATTY 6 cut(s) 271, 601, 1426, 1686, 1843, 2020
AspLEI GCGC 1 cut(s) 8
AspS9I GGNCC 8 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2454
AsuC2I CCSGG 2 cut(s) 72, 73
AsuHPI GGTGA 1 cut(s) 1460
AsuII TTCGAA 1 cut(s) 2044
AvaI CYCGRG 3 cut(s) 71, 1220, 2010
AvaII GGWCC 6 cut(s) 87, 155, 834, 1310, 2121, 2454
AxyI CCTNAGG 1 cut(s) 1883
BalI TGGCCA 1 cut(s) 1005
BamHI GGATCC 1 cut(s) 2306
BanII GRGCYC 1 cut(s) 1522
BbrPI CACGTG 1 cut(s) 1511
Bbv12I GWGCWC 1 cut(s) 1522
BbvCI CCTCAGC 1 cut(s) 1673
BbvI GCAGC 8 cut(s) 63, 181, 544, 1093, 1372, 1642, 1905, 2216
BccI CCATC 7 cut(s) 452, 968, 1037, 1558, 1946, 2116, 2295
BcgI CGANNNNNNTGC 2 cut(s) 340, 374
BciT130I CCWGG 9 cut(s) 85, 146, 522, 838, 899, 1308, 1947, 2026, 2135
BcnI CCSGG 2 cut(s) 72, 73
BcoDI GTCTC 6 cut(s) 30, 59, 945, 1583, 1639, 1743
BfmI CTRYAG 2 cut(s) 1140, 1987
BfuAI ACCTGC 1 cut(s) 2109
BglI GCCNNNNNGGC 1 cut(s) 875
BisI GCNGC 9 cut(s) 49, 77, 195, 558, 1082, 1386, 1656, 1894, 2205
BlpI GCTNAGC 1 cut(s) 362
BlsI GCNGC 9 cut(s) 50, 78, 196, 559, 1083, 1387, 1657, 1895, 2206
Bme18I GGWCC 6 cut(s) 87, 155, 834, 1310, 2121, 2454
BmeRI GACNNNNNGTC 1 cut(s) 2416
BmeT110I CYCGRG 3 cut(s) 71, 1220, 2010
BmgBI CACGTC 2 cut(s) 893, 2282
BmgT120I GGNCC 8 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2454
BmiI GGNNCC 4 cut(s) 89, 2123, 2308, 2456
BmsI GCATC 9 cut(s) 410, 769, 802, 1051, 1156, 1200, 1201, 1312, 1536
BoxI GACNNNNGTC 1 cut(s) 1229
BpmI CTGGAG 1 cut(s) 1361
Bpu10I CCTNAGC 1 cut(s) 1673
Bpu1102I GCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 1 cut(s) 2044
BpuEI CTTGAG 6 cut(s) 257, 498, 1192, 1609, 1889, 2417
BpuMI CCSGG 2 cut(s) 72, 73
BsaAI YACGTR 1 cut(s) 1511
BsaBI GATNNNNATC 1 cut(s) 1215
BsaI GGTCTC 1 cut(s) 945
BsaJI CCNNGG 9 cut(s) 70, 71, 521, 761, 837, 1125, 1946, 2133, 2310
BsaWI WCCGGW 1 cut(s) 1732
Bsc4I CCNNNNNNNGG 6 cut(s) 47, 105, 1221, 1486, 1761, 2242
Bse1I ACTGG 1 cut(s) 2061
Bse21I CCTNAGG 1 cut(s) 1883
Bse3DI GCAATG 2 cut(s) 120, 2099
Bse8I GATNNNNATC 1 cut(s) 1215
BseAI TCCGGA 1 cut(s) 1732
BseBI CCWGG 9 cut(s) 85, 146, 522, 838, 899, 1308, 1947, 2026, 2135
BseDI CCNNGG 9 cut(s) 70, 71, 521, 761, 837, 1125, 1946, 2133, 2310
BseGI GGATG 7 cut(s) 425, 463, 784, 1191, 1213, 1492, 2287
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 6 cut(s) 47, 105, 1221, 1486, 1761, 2242
BseMI GCAATG 2 cut(s) 120, 2099
BseMII CTCAG 5 cut(s) 376, 978, 1664, 1760, 1897
BseNI ACTGG 1 cut(s) 2061
BseRI GAGGAG 1 cut(s) 1690
BseXI GCAGC 8 cut(s) 63, 181, 544, 1093, 1372, 1642, 1905, 2216
BseYI CCCAGC 1 cut(s) 1480
BsgI GTGCAG 3 cut(s) 543, 719, 1806
Bsh1236I CGCG 2 cut(s) 8, 2113
BshFI GGCC 4 cut(s) 1005, 1601, 2015, 2098
BsiHKAI GWGCWC 1 cut(s) 1522
BsiHKCI CYCGRG 3 cut(s) 71, 1220, 2010
BsiSI CCGG 2 cut(s) 72, 1733
BslFI GGGAC 3 cut(s) 73, 1237, 2107
BslI CCNNNNNNNGG 6 cut(s) 47, 105, 1221, 1486, 1761, 2242
BsmAI GTCTC 6 cut(s) 30, 59, 945, 1583, 1639, 1743
BsmFI GGGAC 3 cut(s) 73, 1237, 2107
BsnI GGCC 4 cut(s) 1005, 1601, 2015, 2098
Bso31I GGTCTC 1 cut(s) 945
BsoBI CYCGRG 3 cut(s) 71, 1220, 2010
Bsp119I TTCGAA 1 cut(s) 2044
Bsp1286I GDGCHC 1 cut(s) 1522
Bsp13I TCCGGA 1 cut(s) 1732
Bsp1407I TGTACA 1 cut(s) 1279
Bsp143I GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
Bsp1720I GCTNAGC 1 cut(s) 362
BspACI CCGC 5 cut(s) 8, 48, 91, 211, 913
BspANI GGCC 4 cut(s) 1005, 1601, 2015, 2098
BspCNI CTCAG 5 cut(s) 375, 977, 1665, 1761, 1896
BspEI TCCGGA 1 cut(s) 1732
BspFNI CGCG 2 cut(s) 8, 2113
BspLI GGNNCC 4 cut(s) 89, 2123, 2308, 2456
BspMI ACCTGC 1 cut(s) 2109
BspPI GGATC 4 cut(s) 393, 2222, 2301, 2314
BspQI GCTCTTC 2 cut(s) 2358, 2396
BspT104I TTCGAA 1 cut(s) 2044
BspTNI GGTCTC 1 cut(s) 945
BsrDI GCAATG 2 cut(s) 120, 2099
BsrGI TGTACA 1 cut(s) 1279
BsrI ACTGG 1 cut(s) 2061
BssECI CCNNGG 9 cut(s) 70, 71, 521, 761, 837, 1125, 1946, 2133, 2310
BssMI GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
BssT1I CCWWGG 3 cut(s) 761, 1125, 2310
Bst2UI CCWGG 9 cut(s) 85, 146, 522, 838, 899, 1308, 1947, 2026, 2135
Bst4CI ACNGT 2 cut(s) 1363, 1633
Bst6I CTCTTC 5 cut(s) 1254, 2009, 2244, 2358, 2396
BstAPI GCANNNNNTGC 2 cut(s) 57, 1197
BstAUI TGTACA 1 cut(s) 1279
BstBAI YACGTR 1 cut(s) 1511
BstBI TTCGAA 1 cut(s) 2044
BstC8I GCNNGC 7 cut(s) 42, 46, 81, 95, 359, 567, 957
BstDEI CTNAG 7 cut(s) 362, 478, 964, 1673, 1769, 1860, 1883
BstF5I GGATG 7 cut(s) 425, 463, 784, 1191, 1213, 1492, 2287
BstFNI CGCG 2 cut(s) 8, 2113
BstHHI GCGC 1 cut(s) 8
BstKTI GATC 7 cut(s) 166, 225, 388, 1299, 1609, 2230, 2309
BstMAI GTCTC 6 cut(s) 30, 59, 945, 1583, 1639, 1743
BstMBI GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
BstNI CCWGG 9 cut(s) 85, 146, 522, 838, 899, 1308, 1947, 2026, 2135
BstNSI RCATGY 4 cut(s) 472, 1081, 1124, 1957
BstPAI GACNNNNGTC 1 cut(s) 1229
BstSFI CTRYAG 2 cut(s) 1140, 1987
BstUI CGCG 2 cut(s) 8, 2113
BstV1I GCAGC 8 cut(s) 63, 181, 544, 1093, 1372, 1642, 1905, 2216
BstX2I RGATCY 1 cut(s) 2306
BstYI RGATCY 1 cut(s) 2306
Bsu36I CCTNAGG 1 cut(s) 1883
BsuRI GGCC 4 cut(s) 1005, 1601, 2015, 2098
BtgZI GCGATG 2 cut(s) 1508, 2094
BtrI CACGTC 2 cut(s) 893, 2282
BtsCI GGATG 7 cut(s) 425, 463, 784, 1191, 1213, 1492, 2287
BtsI GCAGTG 3 cut(s) 560, 645, 1195
BtsIMutI CAGTG 6 cut(s) 560, 645, 698, 1195, 1368, 2207
BveI ACCTGC 1 cut(s) 2109
Cac8I GCNNGC 7 cut(s) 42, 46, 81, 95, 359, 567, 957
CaiI CAGNNNCTG 1 cut(s) 57
CfoI GCGC 1 cut(s) 8
Cfr13I GGNCC 8 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2454
Cfr9I CCCGGG 1 cut(s) 71
CseI GACGC 1 cut(s) 2102
Csp6I GTAC 4 cut(s) 109, 1280, 1398, 2254
CspCI CAANNNNNGTGG 2 cut(s) 271, 306
CviQI GTAC 4 cut(s) 109, 1280, 1398, 2254
DdeI CTNAG 7 cut(s) 362, 478, 964, 1673, 1769, 1860, 1883
DpnI GATC 7 cut(s) 165, 224, 387, 1298, 1608, 2229, 2308
DpnII GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
DriI GACNNNNNGTC 1 cut(s) 2416
EaeI YGGCCR 1 cut(s) 1003
Eam1104I CTCTTC 5 cut(s) 1254, 2009, 2244, 2358, 2396
Eam1105I GACNNNNNGTC 1 cut(s) 2416
EarI CTCTTC 5 cut(s) 1254, 2009, 2244, 2358, 2396
Ecl136II GAGCTC 1 cut(s) 1520
Eco130I CCWWGG 3 cut(s) 761, 1125, 2310
Eco147I AGGCCT 1 cut(s) 1601
Eco24I GRGCYC 1 cut(s) 1522
Eco31I GGTCTC 1 cut(s) 945
Eco47I GGWCC 6 cut(s) 87, 155, 834, 1310, 2121, 2454
Eco53kI GAGCTC 1 cut(s) 1520
Eco57I CTGAAG 4 cut(s) 696, 1539, 1635, 2382
Eco72I CACGTG 1 cut(s) 1511
Eco81I CCTNAGG 1 cut(s) 1883
Eco88I CYCGRG 3 cut(s) 71, 1220, 2010
EcoICRI GAGCTC 1 cut(s) 1520
EcoO109I RGGNCCY 2 cut(s) 87, 2121
EcoRI GAATTC 2 cut(s) 601, 2020
EcoRII CCWGG 9 cut(s) 83, 144, 520, 836, 897, 1306, 1945, 2024, 2133
EcoT14I CCWWGG 3 cut(s) 761, 1125, 2310
EcoT22I ATGCAT 1 cut(s) 375
EcoT38I GRGCYC 1 cut(s) 1522
ErhI CCWWGG 3 cut(s) 761, 1125, 2310
FaqI GGGAC 3 cut(s) 73, 1237, 2107
FauI CCCGC 1 cut(s) 98
Fnu4HI GCNGC 9 cut(s) 49, 77, 195, 558, 1082, 1386, 1656, 1894, 2205
FokI GGATG 7 cut(s) 432, 470, 791, 1178, 1220, 1479, 2274
FriOI GRGCYC 1 cut(s) 1522
Fsp4HI GCNGC 9 cut(s) 49, 77, 195, 558, 1082, 1386, 1656, 1894, 2205
GlaI GCGC 1 cut(s) 7
GluI GCNGC 9 cut(s) 49, 77, 195, 558, 1082, 1386, 1656, 1894, 2205
GsaI CCCAGC 1 cut(s) 1484
GsuI CTGGAG 1 cut(s) 1361
HaeIII GGCC 4 cut(s) 1005, 1601, 2015, 2098
HapII CCGG 2 cut(s) 72, 1733
HgaI GACGC 1 cut(s) 2102
HhaI GCGC 1 cut(s) 8
Hin6I GCGC 1 cut(s) 6
HinP1I GCGC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 1813
HinfI GANTC 9 cut(s) 214, 427, 688, 747, 754, 902, 2149, 2196, 2378
HpaII CCGG 2 cut(s) 72, 1733
HphI GGTGA 1 cut(s) 1460
Hpy166II GTNNAC 1 cut(s) 2130
Hpy188I TCNGA 9 cut(s) 168, 495, 507, 746, 805, 1301, 1770, 1797, 2422
Hpy8I GTNNAC 1 cut(s) 2130
Hpy99I CGWCG 1 cut(s) 2118
HpyAV CCTTC 7 cut(s) 146, 389, 476, 671, 857, 1836, 2084
HpyCH4III ACNGT 2 cut(s) 1363, 1633
HpyCH4IV ACGT 4 cut(s) 550, 892, 1510, 2281
HpyF3I CTNAG 7 cut(s) 362, 478, 964, 1673, 1769, 1860, 1883
HpySE526I ACGT 4 cut(s) 550, 892, 1510, 2281
HspAI GCGC 1 cut(s) 6
Kpn2I TCCGGA 1 cut(s) 1732
Kzo9I GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
LguI GCTCTTC 2 cut(s) 2358, 2396
LmnI GCTCC 2 cut(s) 331, 1517
Lsp1109I GCAGC 8 cut(s) 63, 181, 544, 1093, 1372, 1642, 1905, 2216
LweI GCATC 9 cut(s) 410, 769, 802, 1051, 1156, 1200, 1201, 1312, 1536
MaeII ACGT 4 cut(s) 550, 892, 1510, 2281
MaeIII GTNAC 5 cut(s) 248, 1099, 2259, 2282, 2343
MalI GATC 7 cut(s) 165, 224, 387, 1298, 1608, 2229, 2308
MboI GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
MfeI CAATTG 3 cut(s) 1380, 1974, 2394
MflI RGATCY 1 cut(s) 2306
MhlI GDGCHC 1 cut(s) 1522
MlsI TGGCCA 1 cut(s) 1005
MluNI TGGCCA 1 cut(s) 1005
MlyI GAGTC 2 cut(s) 421, 2205
MmeI TCCRAC 3 cut(s) 1495, 1775, 2432
Mox20I TGGCCA 1 cut(s) 1005
Mph1103I ATGCAT 1 cut(s) 375
MroI TCCGGA 1 cut(s) 1732
MscI TGGCCA 1 cut(s) 1005
MslI CAYNNNNRTG 1 cut(s) 1056
Msp20I TGGCCA 1 cut(s) 1005
MspA1I CMGCKG 1 cut(s) 1655
MspI CCGG 2 cut(s) 72, 1733
MunI CAATTG 3 cut(s) 1380, 1974, 2394
MvaI CCWGG 9 cut(s) 85, 146, 522, 838, 899, 1308, 1947, 2026, 2135
MvnI CGCG 2 cut(s) 8, 2113
NciI CCSGG 2 cut(s) 72, 73
NdeII GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
NlaIV GGNNCC 4 cut(s) 89, 2123, 2308, 2456
NmuCI GTSAC 2 cut(s) 2282, 2343
NsiI ATGCAT 1 cut(s) 375
NspI RCATGY 4 cut(s) 472, 1081, 1124, 1957
NspV TTCGAA 1 cut(s) 2044
PceI AGGCCT 1 cut(s) 1601
PciI ACATGT 1 cut(s) 468
PciSI GCTCTTC 2 cut(s) 2358, 2396
PfeI GAWTC 7 cut(s) 214, 688, 747, 754, 902, 2149, 2378
PfoI TCCNGGA 2 cut(s) 897, 2024
PkrI GCNGC 9 cut(s) 50, 78, 196, 559, 1083, 1387, 1657, 1895, 2206
PleI GAGTC 2 cut(s) 421, 2204
PmaCI CACGTG 1 cut(s) 1511
PmlI CACGTG 1 cut(s) 1511
PpsI GAGTC 2 cut(s) 421, 2204
Ppu21I YACGTR 1 cut(s) 1511
PpuMI RGGWCCY 2 cut(s) 87, 2121
PscI ACATGT 1 cut(s) 468
PshAI GACNNNNGTC 1 cut(s) 1229
Psp124BI GAGCTC 1 cut(s) 1522
Psp5II RGGWCCY 2 cut(s) 87, 2121
Psp6I CCWGG 9 cut(s) 83, 144, 520, 836, 897, 1306, 1945, 2024, 2133
PspCI CACGTG 1 cut(s) 1511
PspFI CCCAGC 1 cut(s) 1480
PspGI CCWGG 9 cut(s) 83, 144, 520, 836, 897, 1306, 1945, 2024, 2133
PspN4I GGNNCC 4 cut(s) 89, 2123, 2308, 2456
PspPI GGNCC 8 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2454
PspPPI RGGWCCY 2 cut(s) 87, 2121
PstNI CAGNNNCTG 1 cut(s) 57
PsuI RGATCY 1 cut(s) 2306
PvuII CAGCTG 1 cut(s) 1655
RsaI GTAC 4 cut(s) 110, 1281, 1399, 2255
RsaNI GTAC 4 cut(s) 109, 1280, 1398, 2254
RseI CAYNNNNRTG 1 cut(s) 1056
SacI GAGCTC 1 cut(s) 1522
SapI GCTCTTC 2 cut(s) 2358, 2396
SatI GCNGC 9 cut(s) 49, 77, 195, 558, 1082, 1386, 1656, 1894, 2205
Sau3AI GATC 7 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306
Sau96I GGNCC 8 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2454
SchI GAGTC 2 cut(s) 421, 2205
SduI GDGCHC 1 cut(s) 1522
SfaNI GCATC 9 cut(s) 410, 769, 802, 1051, 1156, 1200, 1201, 1312, 1536
SfcI CTRYAG 2 cut(s) 1140, 1987
SfuI TTCGAA 1 cut(s) 2044
SinI GGWCC 6 cut(s) 87, 155, 834, 1310, 2121, 2454
SmaI CCCGGG 1 cut(s) 73
SmiMI CAYNNNNRTG 1 cut(s) 1056
SmlI CTYRAG 6 cut(s) 236, 513, 1171, 1624, 1868, 2432
SmoI CTYRAG 6 cut(s) 236, 513, 1171, 1624, 1868, 2432
SseBI AGGCCT 1 cut(s) 1601
SsiI CCGC 5 cut(s) 8, 48, 91, 211, 913
SspI AATATT 3 cut(s) 631, 1348, 1726
SstI GAGCTC 1 cut(s) 1522
StuI AGGCCT 1 cut(s) 1601
StyI CCWWGG 3 cut(s) 761, 1125, 2310
TaaI ACNGT 2 cut(s) 1363, 1633
TaiI ACGT 4 cut(s) 553, 895, 1513, 2284
TaqI TCGA 4 cut(s) 618, 624, 1047, 2044
TatI WGTACW 2 cut(s) 1279, 2253
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 7 cut(s) 214, 688, 747, 754, 902, 2149, 2378
TscAI CASTG 6 cut(s) 567, 645, 698, 1202, 1368, 2214
TseFI GTSAC 2 cut(s) 2282, 2343
TseI GCWGC 8 cut(s) 76, 194, 557, 1081, 1385, 1655, 1893, 2204
Tsp45I GTSAC 2 cut(s) 2282, 2343
TspGWI ACGGA 2 cut(s) 2220, 2228
TspMI CCCGGG 1 cut(s) 71
TspRI CASTG 6 cut(s) 567, 645, 698, 1202, 1368, 2214
VpaK11BI GGWCC 6 cut(s) 87, 155, 834, 1310, 2121, 2454
XapI RAATTY 6 cut(s) 271, 601, 1426, 1686, 1843, 2020
XceI RCATGY 4 cut(s) 472, 1081, 1124, 1957
XmaI CCCGGG 1 cut(s) 71
Zsp2I ATGCAT 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.