Rw3G021880

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0003524
Physical Location & Seq
Forward (+)
26597663 .. 26607092
9430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G021880.1

Sequence Viewer

Length: 3081 bp
ATGAGCGCGGTTTCGGGTGTAGTGTCTCGCCAAGTTTTGCCTGCTTGCGGCAGTCTCTGTTTCTTTTGCCCCGGGTTGCGTGCCAGGTCCCGGCAGCCCGTCAAGAGGTACAAGAAGCTCATTGCTGATATTTTCCCCAAAAACCAGGAAGAAGGACCAAATGATCGGAAGATAGGAAAATTGTGTGAATATGCTGCTAAAAATCCTTTGCGGATTCCAAAGATCACAACCTCTCTTGAGCAAAGGTGTTACAAAGAATTGAGAAATGAGAATTTTCTATCCACAAAAATTGTCATGTGCATTTACAAGAAATTGCTGATAACTTGCAAGGAGCAAATGCCTCTCTTTGCGAGTAGCTTGCTCAGCATTATGCATACCCTCCTGGATCAATCACGCCAAGATGAAATGCAAATTATAGGATGCCAGACTCTTTTTGACTTTGTAAATAATCAGGTGGATGGAACATACATGTTTAACTTAGAAGGATTTATTCCGAAACTCTGTCAGATAGCTCAAGAGCCAGGGGAAGATGAAAGGGCAAATAATTTACGTTGTGCTGCACTGCAAGCCCTTTCTTCAATGGTTTGGTTTATGGGCGAGAATTCTCACATATCAGTCGAGTTCGATAATATTGTTGCAGTGGTCTTGGAAAACTATGCAGGTTTTAAGGAAGCTGAAGGTTCGCAGATTCAGTGGGTGCAGGAAGTTCAAAAAGATGAGGGTCATGTTTCTCCACAAGATGTCAGAATCAGGATTCCTCCTTGGAGTGCCATTGTGGATGCCAAAGGCGAACTAAAAGTATCAGAGGAAGATGCCAAGAACCTCTGTTTTTGGTCCAGGGTTTGCCTTCATAACATGGCAAAGTTGGCCAAAGAGGCTACAACAATAAGACGTGTCCTGGAATCTATGTTCCGCTACTTTGATAACGAAAACTTGTGGTCTCTTGAACATGGGCTTGCCATCTCAGTCTTAAAGGATATACAATTCTTAATGGATAATTCTGGGCAAAATACCCATGTTTTGCTATCCATCTTAATCAAGCATCTCGACCACAAAAATGTCCTTAAACAACCCAACATGCAGCTTGACATAGTGGAGGTAACTACCTCCCTCGCTCTACATGCCAAGGTTGAACCTTCTGTAGCAATAATTGGGGCTTTAAGTGATGCCTTGAGGCATTTGAGAAAGAGCATCCACTGCTCTCTGGATGATGCCAATCTCGGGACAGATGTCATCAAATGGAACAAATGCTTTAGAGAAGAGGTGGATAAGTGCCTTGTACAGCTATCATATAAGATCGGAGAACCAGGACCAATTCTTGATGCTATGGCTGTTATGCTGGAGAATATTTCAACTATTACAGTGATAGCCAGAACTACAATTGCTGCTATTTATCGTACTGCTCAAATTGTAGCTTCCTTACCAAATTTGTCCTATCAAAACAAGGCTTTCCCAGAGGCATTGTTTCACCAATTACTCCCAGCTATGGTTCATCCAGACCATGAAACACGTGTTGGAGCTCATCGCATCTTCTCTGTTGTTCTTGTGCCATCTTCAGTTTCGCCTAATATATTCTCATCTAATACCGAGACAAAAAAGGCCTTTGATCTTCACAGGACACTCTCAAGAACTGTCTCTGTGTTTTCTTCTTCAGCTGCCCTTTTTGAGAAGCTGAGGAGAGAGAAAATTTCCTCACGGGAAAGTATTTGTGAAGAAGATGAAAACATTGTTTCGGAGGGGGAAGAAAGAGACACCAATAATGGGTTTCTGAGCAGATTGAAGTCATCTTATAGTCGGACATATAGTATGAAAAGCTTGCCTGCACCTTCAACACCAAATGAAAATTCCATGAGCAATACTAAGGAACTTGAGGCTAATTCCCTCAGGTTGAGCAGCCACCAGATAACTCTCTTGCTTTTATCAATTTCGGCACAATCCATCTCTCCTGGGAACATGCCTGAAAACTATGAAGCAATTGCTCATACCTACAGCCTTGTATTACTCTTCTCTCGGGCCAAGAATTCCTGCATTGAGGTTCTTGTTCGAAGTTTTCAGCTGGCATTTTCCTTACGAAATATTTCTCTTATTGAAGGAGGGCCATTGCCACCATCGCGTCGCAGGTCCCTGTTTACCCTGGCAACTTCAATGATTCTATTTTTATCAAAAGCATACAATTTTTTCTCTCTGGTTGATAGAGTCAAGGCAGCACTGACGGATAAAAAGGTTGATCCGTTCCTACATTTGGTTGAAGAGTACAAGTTACAGGCTGTTAAGGCTGGACCTGACCATCCCACATATCTCTATGGATCCAAGGAAGATGAGAATTTGGCATTAAAATCTTTGTCACAAATAGTGATTACTGAAGAGCAGAGTAGGGAATCATTTGCTTCTGCAATTGTGAAGAGCTTGGACAATTTGTCAGAATCTGAATTGTCTTCTATAAAGGAGGAGTTGCTCAATGATTTCATACCTGATGATATCTGTCCACTAGGAGCACAATTGTTCACGGAAGCTCCGAAAAAACTTTATCAGGTTTCATACCTGATGATATCTGATGCTCCATTATTTTCAATGGAAGATGATTCTGTTCCAGGCTCGTCTAATAGCCACCAGAACAGTGTAGAGTTGTCTATGGATCTTCCCATTCTTTTGAATGTTAATCAACTAATGGAATCGGTCCAGGAGACAGCAAATCAAGTTGGAAGGTTTTCAGTCTCAACTAAACCTGATGTATCTTACAAGGAAATGGCCGGCCACTGTGAGGCACTTCTGCTAGGAAAGCAGCAGAAGATGTCCAAGTTCATGAGTTCTCAAAAGAAAGAGGAATGTTTGATGAACTTCTCTTTACAAAATCATAATGACGACCTGCAAGAAACAACGCCCGATTCTTATATTGGCGTGGGTTCCCATAGGAGCGGTAATGCTTTTGCTGACCACACTGCCACTTCATACAAACTACCGCCAACCCCAGGCCATGTCCCAATGCTTTGTGCAGCGGACTACCAGCATAATCCCCACTCCTCCTTCAGACTACCAGCCTCAAATCCATATGATAACTTCCTAAAAGCTGCCGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1026

Amino Acids

114.8

Weight (kDa)

6.15

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 69 - 158 8.7e-17 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 650, 2109, 2874
AccBSI CCGCTC 1 cut(s) 2916
AccII CGCG 2 cut(s) 8, 2113
AciI CCGC 7 cut(s) 8, 48, 211, 913, 2916, 2960, 2996
AclWI GGATC 5 cut(s) 393, 2222, 2301, 2314, 2643
AcoI YGGCCR 3 cut(s) 867, 2748, 2752
AcsI RAATTY 7 cut(s) 271, 601, 1426, 1686, 1843, 2020, 2323
AcuI CTGAAG 5 cut(s) 696, 1539, 1635, 2382, 3010
AcvI CACGTG 1 cut(s) 1511
AfaI GTAC 4 cut(s) 110, 1281, 1399, 2255
AfiI CCNNNNNNNGG 9 cut(s) 47, 90, 105, 1221, 1486, 1761, 2242, 2761, 2969
AflIII ACRYGT 4 cut(s) 468, 892, 1508, 1510
AhdI GACNNNNNGTC 1 cut(s) 2416
AjiI CACGTC 1 cut(s) 893
AjuI GAANNNNNNNTTGG 4 cut(s) 1497, 1529, 1828, 1860
AloI GAACNNNNNNTCC 2 cut(s) 893, 925
Alw21I GWGCWC 2 cut(s) 1522, 2497
Alw26I GTCTC 8 cut(s) 30, 59, 945, 1583, 1639, 1743, 2678, 2719
AlwI GGATC 5 cut(s) 393, 2222, 2301, 2314, 2643
AlwNI CAGNNNCTG 2 cut(s) 57, 2426
Ama87I CYCGRG 3 cut(s) 71, 1220, 2010
AoxI GGCC 7 cut(s) 867, 1599, 2013, 2096, 2748, 2752, 2971
ApoI RAATTY 7 cut(s) 271, 601, 1426, 1686, 1843, 2020, 2323
Asp700I GAANNNNTTC 2 cut(s) 2077, 2707
AspLEI GCGC 1 cut(s) 8
AspS9I GGNCC 9 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2279, 2677
AsuC2I CCSGG 3 cut(s) 72, 73, 91
AsuHPI GGTGA 1 cut(s) 1460
AsuII TTCGAA 1 cut(s) 2044
AvaI CYCGRG 3 cut(s) 71, 1220, 2010
AvaII GGWCC 7 cut(s) 87, 155, 834, 1310, 2121, 2279, 2677
AxyI CCTNAGG 1 cut(s) 1883
BalI TGGCCA 1 cut(s) 869
BamHI GGATCC 1 cut(s) 2306
BanII GRGCYC 1 cut(s) 1522
BbrPI CACGTG 1 cut(s) 1511
BbsI GAAGAC 1 cut(s) 2427
Bbv12I GWGCWC 2 cut(s) 1522, 2497
BbvCI CCTCAGC 1 cut(s) 1673
BccI CCATC 7 cut(s) 452, 968, 1037, 1558, 1946, 2116, 2295
BcgI CGANNNNNNTGC 2 cut(s) 340, 374
BcnI CCSGG 3 cut(s) 72, 73, 91
BcoDI GTCTC 8 cut(s) 30, 59, 945, 1583, 1639, 1743, 2678, 2719
BfaI CTAG 2 cut(s) 2489, 2774
BfmI CTRYAG 2 cut(s) 1140, 1987
BfuAI ACCTGC 3 cut(s) 650, 2109, 2874
BglI GCCNNNNNGGC 1 cut(s) 875
BlpI GCTNAGC 1 cut(s) 362
Bme18I GGWCC 7 cut(s) 87, 155, 834, 1310, 2121, 2279, 2677
BmeRI GACNNNNNGTC 1 cut(s) 2416
BmeT110I CYCGRG 3 cut(s) 71, 1220, 2010
BmgBI CACGTC 1 cut(s) 893
BmgT120I GGNCC 9 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2279, 2677
BmiI GGNNCC 4 cut(s) 89, 2123, 2308, 2905
BoxI GACNNNNGTC 1 cut(s) 1229
BpiI GAAGAC 1 cut(s) 2427
BpmI CTGGAG 1 cut(s) 1361
Bpu10I CCTNAGC 1 cut(s) 1673
Bpu1102I GCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 1 cut(s) 2044
BpuEI CTTGAG 5 cut(s) 257, 498, 1192, 1609, 1889
BpuMI CCSGG 3 cut(s) 72, 73, 91
BsaAI YACGTR 1 cut(s) 1511
BsaBI GATNNNNATC 1 cut(s) 1215
BsaI GGTCTC 1 cut(s) 945
BsaXI ACNNNNNCTCC 2 cut(s) 2497, 2527
Bsc4I CCNNNNNNNGG 9 cut(s) 47, 90, 105, 1221, 1486, 1761, 2242, 2761, 2969
Bse118I RCCGGY 2 cut(s) 2750, 3071
Bse21I CCTNAGG 1 cut(s) 1883
Bse3DI GCAATG 2 cut(s) 120, 2099
Bse8I GATNNNNATC 1 cut(s) 1215
BseGI GGATG 7 cut(s) 425, 463, 784, 1191, 1213, 1492, 2287
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 9 cut(s) 47, 90, 105, 1221, 1486, 1761, 2242, 2761, 2969
BseMI GCAATG 2 cut(s) 120, 2099
BseMII CTCAG 5 cut(s) 376, 978, 1664, 1760, 1897
BseRI GAGGAG 3 cut(s) 1690, 2462, 3010
BseYI CCCAGC 1 cut(s) 1480
BsgI GTGCAG 4 cut(s) 543, 719, 1806, 3012
Bsh1236I CGCG 2 cut(s) 8, 2113
BshFI GGCC 7 cut(s) 869, 1601, 2015, 2098, 2750, 2754, 2973
BsiHKAI GWGCWC 2 cut(s) 1522, 2497
BsiHKCI CYCGRG 3 cut(s) 71, 1220, 2010
BsiSI CCGG 4 cut(s) 72, 91, 2751, 3072
BslFI GGGAC 4 cut(s) 73, 1237, 2107, 2963
BslI CCNNNNNNNGG 9 cut(s) 47, 90, 105, 1221, 1486, 1761, 2242, 2761, 2969
BsmAI GTCTC 8 cut(s) 30, 59, 945, 1583, 1639, 1743, 2678, 2719
BsmFI GGGAC 4 cut(s) 73, 1237, 2107, 2963
BsnI GGCC 7 cut(s) 869, 1601, 2015, 2098, 2750, 2754, 2973
Bso31I GGTCTC 1 cut(s) 945
BsoBI CYCGRG 3 cut(s) 71, 1220, 2010
Bsp119I TTCGAA 1 cut(s) 2044
Bsp1286I GDGCHC 2 cut(s) 1522, 2497
Bsp1407I TGTACA 1 cut(s) 1279
Bsp143I GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
Bsp1720I GCTNAGC 1 cut(s) 362
BspACI CCGC 7 cut(s) 8, 48, 211, 913, 2916, 2960, 2996
BspANI GGCC 7 cut(s) 869, 1601, 2015, 2098, 2750, 2754, 2973
BspCNI CTCAG 5 cut(s) 375, 977, 1665, 1761, 1896
BspFNI CGCG 2 cut(s) 8, 2113
BspHI TCATGA 1 cut(s) 2802
BspLI GGNNCC 4 cut(s) 89, 2123, 2308, 2905
BspMI ACCTGC 3 cut(s) 650, 2109, 2874
BspPI GGATC 5 cut(s) 393, 2222, 2301, 2314, 2643
BspQI GCTCTTC 2 cut(s) 2358, 2396
BspT104I TTCGAA 1 cut(s) 2044
BspTNI GGTCTC 1 cut(s) 945
BsrBI CCGCTC 1 cut(s) 2916
BsrDI GCAATG 2 cut(s) 120, 2099
BsrFI RCCGGY 2 cut(s) 2750, 3071
BsrGI TGTACA 1 cut(s) 1279
BssAI RCCGGY 2 cut(s) 2750, 3071
BssMI GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
BssT1I CCWWGG 3 cut(s) 761, 1125, 2310
Bst4CI ACNGT 4 cut(s) 1363, 1633, 2618, 2759
Bst6I CTCTTC 5 cut(s) 1254, 2009, 2244, 2358, 2396
BstAPI GCANNNNNTGC 1 cut(s) 1197
BstAUI TGTACA 1 cut(s) 1279
BstBAI YACGTR 1 cut(s) 1511
BstBI TTCGAA 1 cut(s) 2044
BstDEI CTNAG 7 cut(s) 362, 478, 964, 1673, 1769, 1860, 1883
BstF5I GGATG 7 cut(s) 425, 463, 784, 1191, 1213, 1492, 2287
BstFNI CGCG 2 cut(s) 8, 2113
BstHHI GCGC 1 cut(s) 8
BstKTI GATC 8 cut(s) 166, 225, 388, 1299, 1609, 2230, 2309, 2638
BstMAI GTCTC 8 cut(s) 30, 59, 945, 1583, 1639, 1743, 2678, 2719
BstMBI GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
BstMWI GCNNNNNNNGC 9 cut(s) 363, 566, 866, 875, 1121, 1197, 2110, 2273, 2779
BstNSI RCATGY 4 cut(s) 472, 1081, 1124, 1957
BstPAI GACNNNNGTC 1 cut(s) 1229
BstSFI CTRYAG 2 cut(s) 1140, 1987
BstUI CGCG 2 cut(s) 8, 2113
BstV2I GAAGAC 1 cut(s) 2427
BstX2I RGATCY 2 cut(s) 2306, 2635
BstYI RGATCY 2 cut(s) 2306, 2635
Bsu36I CCTNAGG 1 cut(s) 1883
BsuRI GGCC 7 cut(s) 869, 1601, 2015, 2098, 2750, 2754, 2973
BtgZI GCGATG 2 cut(s) 1508, 2094
BtrI CACGTC 1 cut(s) 893
BtsCI GGATG 7 cut(s) 425, 463, 784, 1191, 1213, 1492, 2287
BtsI GCAGTG 4 cut(s) 560, 645, 1195, 2937
BtsIMutI CAGTG 9 cut(s) 560, 645, 698, 1195, 1368, 2207, 2623, 2755, 2937
BveI ACCTGC 3 cut(s) 650, 2109, 2874
CaiI CAGNNNCTG 2 cut(s) 57, 2426
CciI TCATGA 1 cut(s) 2802
CfoI GCGC 1 cut(s) 8
Cfr10I RCCGGY 2 cut(s) 2750, 3071
Cfr13I GGNCC 9 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2279, 2677
Cfr9I CCCGGG 1 cut(s) 71
CseI GACGC 1 cut(s) 2102
Csp6I GTAC 4 cut(s) 109, 1280, 1398, 2254
CspCI CAANNNNNGTGG 2 cut(s) 271, 306
CviQI GTAC 4 cut(s) 109, 1280, 1398, 2254
DdeI CTNAG 7 cut(s) 362, 478, 964, 1673, 1769, 1860, 1883
DpnI GATC 8 cut(s) 165, 224, 387, 1298, 1608, 2229, 2308, 2637
DpnII GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
DriI GACNNNNNGTC 1 cut(s) 2416
EaeI YGGCCR 3 cut(s) 867, 2748, 2752
Eam1104I CTCTTC 5 cut(s) 1254, 2009, 2244, 2358, 2396
Eam1105I GACNNNNNGTC 1 cut(s) 2416
EarI CTCTTC 5 cut(s) 1254, 2009, 2244, 2358, 2396
Ecl136II GAGCTC 1 cut(s) 1520
Eco130I CCWWGG 3 cut(s) 761, 1125, 2310
Eco147I AGGCCT 1 cut(s) 1601
Eco24I GRGCYC 1 cut(s) 1522
Eco31I GGTCTC 1 cut(s) 945
Eco32I GATATC 2 cut(s) 2479, 2550
Eco47I GGWCC 7 cut(s) 87, 155, 834, 1310, 2121, 2279, 2677
Eco53kI GAGCTC 1 cut(s) 1520
Eco57I CTGAAG 5 cut(s) 696, 1539, 1635, 2382, 3010
Eco72I CACGTG 1 cut(s) 1511
Eco81I CCTNAGG 1 cut(s) 1883
Eco88I CYCGRG 3 cut(s) 71, 1220, 2010
EcoICRI GAGCTC 1 cut(s) 1520
EcoO109I RGGNCCY 2 cut(s) 87, 2121
EcoRI GAATTC 2 cut(s) 601, 2020
EcoRV GATATC 2 cut(s) 2479, 2550
EcoT14I CCWWGG 3 cut(s) 761, 1125, 2310
EcoT22I ATGCAT 1 cut(s) 375
EcoT38I GRGCYC 1 cut(s) 1522
ErhI CCWWGG 3 cut(s) 761, 1125, 2310
FaqI GGGAC 4 cut(s) 73, 1237, 2107, 2963
FauNDI CATATG 1 cut(s) 3049
FokI GGATG 7 cut(s) 432, 470, 791, 1178, 1220, 1479, 2274
FriOI GRGCYC 1 cut(s) 1522
FseI GGCCGGCC 1 cut(s) 2754
FspBI CTAG 2 cut(s) 2489, 2774
GlaI GCGC 1 cut(s) 7
GsaI CCCAGC 1 cut(s) 1484
GsuI CTGGAG 1 cut(s) 1361
HaeIII GGCC 7 cut(s) 869, 1601, 2015, 2098, 2750, 2754, 2973
HapII CCGG 4 cut(s) 72, 91, 2751, 3072
HgaI GACGC 1 cut(s) 2102
HhaI GCGC 1 cut(s) 8
Hin6I GCGC 1 cut(s) 6
HinP1I GCGC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 1813
HpaII CCGG 4 cut(s) 72, 91, 2751, 3072
HphI GGTGA 1 cut(s) 1460
Hpy166II GTNNAC 3 cut(s) 2130, 2486, 2505
Hpy8I GTNNAC 3 cut(s) 2130, 2486, 2505
Hpy99I CGWCG 1 cut(s) 2118
HpyAV CCTTC 9 cut(s) 146, 476, 671, 857, 1146, 1836, 2084, 2697, 3034
HpyCH4III ACNGT 4 cut(s) 1363, 1633, 2618, 2759
HpyCH4IV ACGT 3 cut(s) 550, 892, 1510
HpyF10VI GCNNNNNNNGC 9 cut(s) 363, 566, 866, 875, 1121, 1197, 2110, 2273, 2779
HpyF3I CTNAG 7 cut(s) 362, 478, 964, 1673, 1769, 1860, 1883
HpySE526I ACGT 3 cut(s) 550, 892, 1510
HspAI GCGC 1 cut(s) 6
KroI GCCGGC 1 cut(s) 2750
KroNI GCCGGC 1 cut(s) 2752
Kzo9I GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
LguI GCTCTTC 2 cut(s) 2358, 2396
LmnI GCTCC 6 cut(s) 331, 1517, 2492, 2518, 2563, 2913
MaeI CTAG 2 cut(s) 2489, 2774
MaeII ACGT 3 cut(s) 550, 892, 1510
MaeIII GTNAC 4 cut(s) 248, 1099, 2259, 2343
MalI GATC 8 cut(s) 165, 224, 387, 1298, 1608, 2229, 2308, 2637
MbiI CCGCTC 1 cut(s) 2916
MboI GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
MfeI CAATTG 4 cut(s) 1380, 1974, 2394, 2498
MflI RGATCY 2 cut(s) 2306, 2635
MhlI GDGCHC 2 cut(s) 1522, 2497
MlsI TGGCCA 1 cut(s) 869
MluNI TGGCCA 1 cut(s) 869
MlyI GAGTC 2 cut(s) 421, 2205
MmeI TCCRAC 3 cut(s) 1495, 1775, 2680
Mox20I TGGCCA 1 cut(s) 869
Mph1103I ATGCAT 1 cut(s) 375
MroNI GCCGGC 1 cut(s) 2750
MroXI GAANNNNTTC 2 cut(s) 2077, 2707
MscI TGGCCA 1 cut(s) 869
MslI CAYNNNNRTG 1 cut(s) 1056
Msp20I TGGCCA 1 cut(s) 869
MspA1I CMGCKG 3 cut(s) 1655, 2056, 2996
MspI CCGG 4 cut(s) 72, 91, 2751, 3072
MunI CAATTG 4 cut(s) 1380, 1974, 2394, 2498
MvnI CGCG 2 cut(s) 8, 2113
MwoI GCNNNNNNNGC 9 cut(s) 363, 566, 866, 875, 1121, 1197, 2110, 2273, 2779
NaeI GCCGGC 1 cut(s) 2752
NciI CCSGG 3 cut(s) 72, 73, 91
NdeI CATATG 1 cut(s) 3049
NdeII GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
NgoMIV GCCGGC 1 cut(s) 2750
NlaIV GGNNCC 4 cut(s) 89, 2123, 2308, 2905
NmuCI GTSAC 1 cut(s) 2343
NsiI ATGCAT 1 cut(s) 375
NspI RCATGY 4 cut(s) 472, 1081, 1124, 1957
NspV TTCGAA 1 cut(s) 2044
PagI TCATGA 1 cut(s) 2802
PceI AGGCCT 1 cut(s) 1601
PciI ACATGT 1 cut(s) 468
PciSI GCTCTTC 2 cut(s) 2358, 2396
PcsI WCGNNNNNNNCGW 1 cut(s) 2513
PdiI GCCGGC 1 cut(s) 2752
PdmI GAANNNNTTC 2 cut(s) 2077, 2707
PfoI TCCNGGA 3 cut(s) 381, 897, 2679
PleI GAGTC 2 cut(s) 421, 2204
PmaCI CACGTG 1 cut(s) 1511
PmlI CACGTG 1 cut(s) 1511
PpsI GAGTC 2 cut(s) 421, 2204
Ppu21I YACGTR 1 cut(s) 1511
PpuMI RGGWCCY 2 cut(s) 87, 2121
PscI ACATGT 1 cut(s) 468
PshAI GACNNNNGTC 1 cut(s) 1229
Psp124BI GAGCTC 1 cut(s) 1522
Psp5II RGGWCCY 2 cut(s) 87, 2121
PspCI CACGTG 1 cut(s) 1511
PspFI CCCAGC 1 cut(s) 1480
PspN4I GGNNCC 4 cut(s) 89, 2123, 2308, 2905
PspPI GGNCC 9 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2279, 2677
PspPPI RGGWCCY 2 cut(s) 87, 2121
PstNI CAGNNNCTG 2 cut(s) 57, 2426
PsuI RGATCY 2 cut(s) 2306, 2635
PvuII CAGCTG 2 cut(s) 1655, 2056
RigI GGCCGGCC 1 cut(s) 2754
RsaI GTAC 4 cut(s) 110, 1281, 1399, 2255
RsaNI GTAC 4 cut(s) 109, 1280, 1398, 2254
RseI CAYNNNNRTG 1 cut(s) 1056
SacI GAGCTC 1 cut(s) 1522
SapI GCTCTTC 2 cut(s) 2358, 2396
Sau3AI GATC 8 cut(s) 163, 222, 385, 1296, 1606, 2227, 2306, 2635
Sau96I GGNCC 9 cut(s) 87, 155, 834, 1310, 2013, 2096, 2121, 2279, 2677
SchI GAGTC 2 cut(s) 421, 2205
SduI GDGCHC 2 cut(s) 1522, 2497
SfcI CTRYAG 2 cut(s) 1140, 1987
SfuI TTCGAA 1 cut(s) 2044
SinI GGWCC 7 cut(s) 87, 155, 834, 1310, 2121, 2279, 2677
SmaI CCCGGG 1 cut(s) 73
SmiMI CAYNNNNRTG 1 cut(s) 1056
SmlI CTYRAG 5 cut(s) 236, 513, 1171, 1624, 1868
SmoI CTYRAG 5 cut(s) 236, 513, 1171, 1624, 1868
SseBI AGGCCT 1 cut(s) 1601
SsiI CCGC 7 cut(s) 8, 48, 211, 913, 2916, 2960, 2996
SspI AATATT 3 cut(s) 631, 1348, 2077
SspMI CTAG 2 cut(s) 2489, 2774
SstI GAGCTC 1 cut(s) 1522
StuI AGGCCT 1 cut(s) 1601
StyI CCWWGG 3 cut(s) 761, 1125, 2310
TaaI ACNGT 4 cut(s) 1363, 1633, 2618, 2759
TaiI ACGT 3 cut(s) 553, 895, 1513
TaqI TCGA 4 cut(s) 618, 624, 1047, 2044
TaqII GACCGA 1 cut(s) 2665
TatI WGTACW 2 cut(s) 1279, 2253
TauI GCSGC 1 cut(s) 51
TscAI CASTG 9 cut(s) 567, 645, 698, 1202, 1368, 2214, 2623, 2762, 2944
TseFI GTSAC 1 cut(s) 2343
Tsp45I GTSAC 1 cut(s) 2343
TspGWI ACGGA 3 cut(s) 2220, 2228, 2522
TspMI CCCGGG 1 cut(s) 71
TspRI CASTG 9 cut(s) 567, 645, 698, 1202, 1368, 2214, 2623, 2762, 2944
VpaK11BI GGWCC 7 cut(s) 87, 155, 834, 1310, 2121, 2279, 2677
XapI RAATTY 7 cut(s) 271, 601, 1426, 1686, 1843, 2020, 2323
XceI RCATGY 4 cut(s) 472, 1081, 1124, 1957
XmaI CCCGGG 1 cut(s) 71
XmnI GAANNNNTTC 2 cut(s) 2077, 2707
XspI CTAG 2 cut(s) 2489, 2774
Zsp2I ATGCAT 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.