pycom14g06530

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
6474963 .. 6476860
1898 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1425 bp
ATGCTGGTGACTGCAGTTGGTATGAGGACTGAATGGGGAAAATTGATGGAAACGCTGAGTGAAGGAGGAGAAGATGAGACCCCACTGCAGGTGAAGCTTAATGGTGTTGCTACAATTATTGGTAAAATTGGTTTGACTTTTGCAGTGTTGACATTTTTGGTATTGGCGGTAAGATTTTTGGTGACAAAAGGACTTAACAACGAGATCACTGATTGGTCTTCAACTGACGCTGTAACACTTTTGAACTACTTTGCTATTGCGGTAACTATAATTGTTGTTGCAGTTCCCGAAGGATTACCATTGGCAGTGACGCTGAGTCTTGCTTTTGCAATGAAAAAATTGATGAATGATAGGGCACTTGTAAGGCATCTCTCAGCATGTGAGACAATGGGTTCTGCTGGTTGTATTTGCACAGATAAAACAGGAACATTAACTACAAATCATATGGTAGTTACCAAAGTATGGATATGTGAAAAATCTGTAGATGTTAAAGAAAATGACAGTAAAGAAACATTGACATCAGAAATATCTGGAGCATCAAGCATCCTTTTGCAGGTTATATTTCAAAATACAAGTTCTGAGGTTATTAAGGATGATGGAAAGACCTCCATTTTGGGAACACCAACGGAGTCAGCATTGCTAGAGTTCGGTTTACTTTTAGGTGGCGATTTTGATGCCCTGCGCAGAGAGGTAAAGATTCTTAAGATTGAACCTTTTAATTCTGTCAGGAAGAAAATGTCTGTTCTTGTAGTTCATCCTCATGGTGGAAAACGAGCGTTTTGCAAAGGTGCATCAGAAATAGTACTGGGAATATGTAACAAGTACATTGACTCTAATGGAGAATCTGTTTATCTCTCCGAAGAAATGGTAAAGAATATCACGAATGTCATAAATACTTTTGCCTGTGAAGCTTTGAGAACTCTCTGCTTAGCTTTCAAGGATATAGATGACTCTTCCATCGAAAGTGGCATCCCAGATGATGGCTATACATTGGTAGCAGTTGTTGGTATTAAGGATCCTGTCCGCCCGGGGGTCAAGGAGGCAGTTGAGACTTGTTTAGCTGCTGGAATCACTGTACGTATGGTAACTGGTGATAATATAAATACAGCTAAAGCCATTGCTAAAGAATGTGGCATACTCACAGAGGGTGGTATAGCCATAGAAGGACCTGAGTTTCGTAGCATGTCTCTTGAGCAGATGAAAACTGTGATACCGAGGATTCAGGTAATGGCCCGGTCTTTACCTTTGGATAAGCACACATTGGTAAAAACTTTGAGGGATGAATTTGGTGAGGTAGTTGCAGTGACTGGTGATGGGACTAATGACGCTCCTGCTTTGAAAGAGTCAGACATTGGACTTGCTATGGGCATAGGAGGAACAGAGGTTTGTTGCCAAAGAAAGTGCCGATGTCATCATATTGGATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

475

Amino Acids

50.84

Weight (kDa)

5.4

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase PF13246 191 - 343 5e-32 P-type ATPase, cytoplasmic domain N
Hydrolase PF00702 313 - 449 7.8e-13 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 79
Acc16I TGCGCA 1 cut(s) 683
Acc36I ACCTGC 2 cut(s) 79, 544
AccB7I CCANNNNNTGG 2 cut(s) 462, 980
AciI CCGC 3 cut(s) 167, 260, 1024
AclWI GGATC 2 cut(s) 1010, 1023
AcsI RAATTY 1 cut(s) 1283
AfaI GTAC 3 cut(s) 804, 824, 1077
AfiI CCNNNNNNNGG 6 cut(s) 88, 462, 553, 764, 980, 1030
AflII CTTAAG 1 cut(s) 701
AgsI TTSAA 6 cut(s) 222, 244, 566, 710, 937, 1339
AhdI GACNNNNNGTC 1 cut(s) 315
AluBI AGCT 5 cut(s) 97, 911, 932, 1061, 1109
AluI AGCT 5 cut(s) 97, 911, 932, 1061, 1109
Alw26I GTCTC 4 cut(s) 71, 377, 1043, 1191
AlwI GGATC 2 cut(s) 1010, 1023
AlwNI CAGNNNCTG 1 cut(s) 1307
Ama87I CYCGRG 1 cut(s) 1027
AoxI GGCC 1 cut(s) 1230
ApeKI GCWGC 1 cut(s) 1061
ApoI RAATTY 1 cut(s) 1283
ArsI GACNNNNNNTTYG 4 cut(s) 595, 627, 1158, 1190
AspLEI GCGC 1 cut(s) 684
AspS9I GGNCC 2 cut(s) 1166, 1231
AsuC2I CCSGG 3 cut(s) 1028, 1029, 1234
AsuHPI GGTGA 6 cut(s) 19, 103, 193, 1103, 1301, 1322
AvaI CYCGRG 1 cut(s) 1027
AvaII GGWCC 1 cut(s) 1166
BaeGI GKGCMC 1 cut(s) 358
BamHI GGATCC 1 cut(s) 1015
BbsI GAAGAC 1 cut(s) 210
BbvI GCAGC 1 cut(s) 1048
BccI CCATC 5 cut(s) 40, 590, 965, 974, 1307
BcgI CGANNNNNNTGC 4 cut(s) 656, 690, 762, 796
BcnI CCSGG 3 cut(s) 1028, 1029, 1234
BcoDI GTCTC 4 cut(s) 71, 377, 1043, 1191
BfaI CTAG 1 cut(s) 641
BfmI CTRYAG 3 cut(s) 12, 86, 480
BfrI CTTAAG 1 cut(s) 701
BfuAI ACCTGC 2 cut(s) 79, 544
BisI GCNGC 1 cut(s) 1062
BlpI GCTNAGC 1 cut(s) 928
BlsI GCNGC 1 cut(s) 1063
BmcAI AGTACT 1 cut(s) 804
Bme1390I CCNGG 3 cut(s) 1028, 1029, 1234
Bme18I GGWCC 1 cut(s) 1166
BmeRI GACNNNNNGTC 1 cut(s) 315
BmeT110I CYCGRG 1 cut(s) 1027
BmgT120I GGNCC 2 cut(s) 1166, 1231
BmiI GGNNCC 1 cut(s) 1017
BmrFI CCNGG 3 cut(s) 1028, 1029, 1234
BmrI ACTGGG 1 cut(s) 815
BmsI GCATC 6 cut(s) 376, 545, 552, 664, 800, 978
BmuI ACTGGG 1 cut(s) 815
BpiI GAAGAC 1 cut(s) 210
BpmI CTGGAG 1 cut(s) 552
Bpu1102I GCTNAGC 1 cut(s) 928
BpuEI CTTGAG 1 cut(s) 1211
BpuMI CCSGG 3 cut(s) 1028, 1029, 1234
BsaAI YACGTR 1 cut(s) 1079
BsaI GGTCTC 1 cut(s) 71
BsaJI CCNNGG 3 cut(s) 1027, 1028, 1214
BsaXI ACNNNNNCTCC 2 cut(s) 831, 861
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 462, 553, 764, 980, 1030
Bse1I ACTGG 3 cut(s) 810, 1093, 1312
Bse3DI GCAATG 3 cut(s) 336, 635, 1116
BseDI CCNNGG 3 cut(s) 1027, 1028, 1214
BseGI GGATG 5 cut(s) 543, 598, 754, 969, 1285
BseLI CCNNNNNNNGG 6 cut(s) 88, 462, 553, 764, 980, 1030
BseMI GCAATG 3 cut(s) 336, 635, 1116
BseMII CTCAG 5 cut(s) 47, 305, 387, 570, 1161
BseNI ACTGG 3 cut(s) 810, 1093, 1312
BseRI GAGGAG 1 cut(s) 81
BseSI GKGCMC 1 cut(s) 358
BseXI GCAGC 1 cut(s) 1048
BshFI GGCC 1 cut(s) 1232
BsiHKCI CYCGRG 1 cut(s) 1027
BsiSI CCGG 2 cut(s) 1028, 1234
BslFI GGGAC 1 cut(s) 1330
BslI CCNNNNNNNGG 6 cut(s) 88, 462, 553, 764, 980, 1030
BsmAI GTCTC 4 cut(s) 71, 377, 1043, 1191
BsmFI GGGAC 1 cut(s) 1330
BsnI GGCC 1 cut(s) 1232
Bso31I GGTCTC 1 cut(s) 71
BsoBI CYCGRG 1 cut(s) 1027
Bsp1286I GDGCHC 1 cut(s) 358
Bsp143I GATC 2 cut(s) 204, 1015
Bsp1720I GCTNAGC 1 cut(s) 928
BspACI CCGC 3 cut(s) 167, 260, 1024
BspANI GGCC 1 cut(s) 1232
BspCNI CTCAG 5 cut(s) 48, 306, 386, 571, 1162
BspLI GGNNCC 1 cut(s) 1017
BspMAI CTGCAG 2 cut(s) 16, 90
BspMI ACCTGC 2 cut(s) 79, 544
BspPI GGATC 2 cut(s) 1010, 1023
BspTI CTTAAG 1 cut(s) 701
BspTNI GGTCTC 1 cut(s) 71
BsrDI GCAATG 3 cut(s) 336, 635, 1116
BsrI ACTGG 3 cut(s) 810, 1093, 1312
BssECI CCNNGG 3 cut(s) 1027, 1028, 1214
BssMI GATC 2 cut(s) 204, 1015
Bst4CI ACNGT 3 cut(s) 503, 1075, 1207
Bst6I CTCTTC 1 cut(s) 958
BstAFI CTTAAG 1 cut(s) 701
BstBAI YACGTR 1 cut(s) 1079
BstDEI CTNAG 6 cut(s) 56, 314, 373, 579, 928, 1170
BstENI CCTNNNNNAGG 1 cut(s) 551
BstF5I GGATG 5 cut(s) 543, 598, 754, 969, 1285
BstHHI GCGC 1 cut(s) 684
BstKTI GATC 2 cut(s) 207, 1018
BstMAI GTCTC 4 cut(s) 71, 377, 1043, 1191
BstMBI GATC 2 cut(s) 204, 1015
BstMWI GCNNNNNNNGC 2 cut(s) 94, 908
BstNSI RCATGY 2 cut(s) 381, 1186
BstSCI CCNGG 3 cut(s) 1026, 1027, 1232
BstSFI CTRYAG 3 cut(s) 12, 86, 480
BstSLI GKGCMC 1 cut(s) 358
BstSNI TACGTA 1 cut(s) 1079
BstV1I GCAGC 1 cut(s) 1048
BstV2I GAAGAC 1 cut(s) 210
BstX2I RGATCY 1 cut(s) 1015
BstYI RGATCY 1 cut(s) 1015
BsuRI GGCC 1 cut(s) 1232
BtsCI GGATG 5 cut(s) 543, 598, 754, 969, 1285
BtsI GCAGTG 4 cut(s) 83, 150, 312, 1308
BtsIMutI CAGTG 6 cut(s) 83, 150, 207, 312, 1071, 1308
BveI ACCTGC 2 cut(s) 79, 544
CaiI CAGNNNCTG 1 cut(s) 1307
CfoI GCGC 1 cut(s) 684
Cfr13I GGNCC 2 cut(s) 1166, 1231
Cfr9I CCCGGG 1 cut(s) 1027
CseI GACGC 3 cut(s) 236, 319, 1334
Csp6I GTAC 3 cut(s) 803, 823, 1076
CviAII CATG 3 cut(s) 378, 761, 1183
CviJI RGCY 9 cut(s) 97, 911, 932, 984, 1061, 1109, 1115, 1157, 1232
CviKI_1 RGCY 9 cut(s) 97, 911, 932, 984, 1061, 1109, 1115, 1157, 1232
CviQI GTAC 3 cut(s) 803, 823, 1076
DdeI CTNAG 6 cut(s) 56, 314, 373, 579, 928, 1170
DpnI GATC 2 cut(s) 206, 1017
DpnII GATC 2 cut(s) 204, 1015
DriI GACNNNNNGTC 1 cut(s) 315
Eam1104I CTCTTC 1 cut(s) 958
Eam1105I GACNNNNNGTC 1 cut(s) 315
EarI CTCTTC 1 cut(s) 958
EciI GGCGGA 1 cut(s) 1013
Eco105I TACGTA 1 cut(s) 1079
Eco31I GGTCTC 1 cut(s) 71
Eco47I GGWCC 1 cut(s) 1166
Eco88I CYCGRG 1 cut(s) 1027
EcoNI CCTNNNNNAGG 1 cut(s) 551
EcoO109I RGGNCCY 1 cut(s) 1166
FaeI CATG 3 cut(s) 381, 764, 1186
FaqI GGGAC 1 cut(s) 1330
FatI CATG 3 cut(s) 377, 760, 1182
FauNDI CATATG 1 cut(s) 444
Fnu4HI GCNGC 1 cut(s) 1062
FokI GGATG 5 cut(s) 530, 605, 741, 956, 1292
Fsp4HI GCNGC 1 cut(s) 1062
FspBI CTAG 1 cut(s) 641
FspI TGCGCA 1 cut(s) 683
GlaI GCGC 1 cut(s) 683
GluI GCNGC 1 cut(s) 1062
GsuI CTGGAG 1 cut(s) 552
HaeIII GGCC 1 cut(s) 1232
HapII CCGG 2 cut(s) 1028, 1234
HgaI GACGC 3 cut(s) 236, 319, 1334
HhaI GCGC 1 cut(s) 684
Hin1II CATG 3 cut(s) 381, 764, 1186
Hin6I GCGC 1 cut(s) 682
HinP1I GCGC 1 cut(s) 682
HincII GTYRAC 1 cut(s) 150
HindII GTYRAC 1 cut(s) 150
HindIII AAGCTT 2 cut(s) 95, 909
HinfI GANTC 9 cut(s) 316, 629, 697, 830, 842, 950, 1068, 1219, 1343
HpaII CCGG 2 cut(s) 1028, 1234
HphI GGTGA 6 cut(s) 19, 103, 193, 1103, 1301, 1322
Hpy166II GTNNAC 2 cut(s) 150, 653
Hpy188I TCNGA 5 cut(s) 523, 580, 796, 859, 1348
Hpy188III TCNNGA 5 cut(s) 287, 531, 727, 880, 1190
Hpy8I GTNNAC 2 cut(s) 150, 653
HpyAV CCTTC 3 cut(s) 56, 284, 1157
HpyCH4III ACNGT 3 cut(s) 503, 1075, 1207
HpyCH4IV ACGT 1 cut(s) 1078
HpyF10VI GCNNNNNNNGC 2 cut(s) 94, 908
HpyF3I CTNAG 6 cut(s) 56, 314, 373, 579, 928, 1170
HpySE526I ACGT 1 cut(s) 1078
Hsp92II CATG 3 cut(s) 381, 764, 1186
HspAI GCGC 1 cut(s) 682
Kzo9I GATC 2 cut(s) 204, 1015
LmnI GCTCC 2 cut(s) 533, 1333
Lsp1109I GCAGC 1 cut(s) 1048
LweI GCATC 6 cut(s) 376, 545, 552, 664, 800, 978
MaeI CTAG 1 cut(s) 641
MaeII ACGT 1 cut(s) 1078
MaeIII GTNAC 9 cut(s) 7, 181, 232, 262, 307, 451, 815, 1084, 1303
MalI GATC 2 cut(s) 206, 1017
MboI GATC 2 cut(s) 204, 1015
MboII GAAGA 5 cut(s) 83, 210, 742, 872, 945
MflI RGATCY 1 cut(s) 1015
MhlI GDGCHC 1 cut(s) 358
MluCI AATT 7 cut(s) 41, 114, 126, 270, 338, 718, 1283
MlyI GAGTC 5 cut(s) 325, 638, 824, 944, 1352
MseI TTAA 8 cut(s) 99, 195, 431, 489, 588, 702, 717, 1011
MslI CAYNNNNRTG 1 cut(s) 759
MspCI CTTAAG 1 cut(s) 701
MspI CCGG 2 cut(s) 1028, 1234
MspR9I CCNGG 3 cut(s) 1028, 1029, 1234
MwoI GCNNNNNNNGC 2 cut(s) 94, 908
NciI CCSGG 3 cut(s) 1028, 1029, 1234
NdeI CATATG 1 cut(s) 444
NdeII GATC 2 cut(s) 204, 1015
NlaIII CATG 3 cut(s) 381, 764, 1186
NlaIV GGNNCC 1 cut(s) 1017
NmuCI GTSAC 4 cut(s) 7, 181, 307, 1303
NsbI TGCGCA 1 cut(s) 683
NspI RCATGY 2 cut(s) 381, 1186
PaqCI CACCTGC 1 cut(s) 79
PfeI GAWTC 4 cut(s) 697, 842, 1068, 1219
PflMI CCANNNNNTGG 2 cut(s) 462, 980
PkrI GCNGC 1 cut(s) 1063
PleI GAGTC 5 cut(s) 324, 637, 824, 944, 1351
PpsI GAGTC 5 cut(s) 324, 637, 824, 944, 1351
Ppu21I YACGTR 1 cut(s) 1079
PpuMI RGGWCCY 1 cut(s) 1166
Psp5II RGGWCCY 1 cut(s) 1166
PspN4I GGNNCC 1 cut(s) 1017
PspPI GGNCC 2 cut(s) 1166, 1231
PspPPI RGGWCCY 1 cut(s) 1166
PsrI GAACNNNNNNTAC 2 cut(s) 418, 450
PstI CTGCAG 2 cut(s) 16, 90
PstNI CAGNNNCTG 1 cut(s) 1307
PsuI RGATCY 1 cut(s) 1015
RsaI GTAC 3 cut(s) 804, 824, 1077
RsaNI GTAC 3 cut(s) 803, 823, 1076
RseI CAYNNNNRTG 1 cut(s) 759
SaqAI TTAA 8 cut(s) 99, 195, 431, 489, 588, 702, 717, 1011
SatI GCNGC 1 cut(s) 1062
Sau3AI GATC 2 cut(s) 204, 1015
Sau96I GGNCC 2 cut(s) 1166, 1231
ScaI AGTACT 1 cut(s) 804
SchI GAGTC 5 cut(s) 325, 638, 824, 944, 1352
ScrFI CCNGG 3 cut(s) 1028, 1029, 1234
SduI GDGCHC 1 cut(s) 358
SfaNI GCATC 6 cut(s) 376, 545, 552, 664, 800, 978
SfcI CTRYAG 3 cut(s) 12, 86, 480
SinI GGWCC 1 cut(s) 1166
SmaI CCCGGG 1 cut(s) 1029
SmiMI CAYNNNNRTG 1 cut(s) 759
SmlI CTYRAG 2 cut(s) 701, 1190
SmoI CTYRAG 2 cut(s) 701, 1190
SnaBI TACGTA 1 cut(s) 1079
Sse9I AATT 7 cut(s) 41, 114, 126, 270, 338, 718, 1283
SsiI CCGC 3 cut(s) 167, 260, 1024
SspMI CTAG 1 cut(s) 641
StyD4I CCNGG 3 cut(s) 1026, 1027, 1232
TaaI ACNGT 3 cut(s) 503, 1075, 1207
TaiI ACGT 1 cut(s) 1081
TaqI TCGA 1 cut(s) 960
TasI AATT 7 cut(s) 41, 114, 126, 270, 338, 718, 1283
TatI WGTACW 2 cut(s) 802, 822
TfiI GAWTC 4 cut(s) 697, 842, 1068, 1219
Tru1I TTAA 8 cut(s) 99, 195, 431, 489, 588, 702, 717, 1011
Tru9I TTAA 8 cut(s) 99, 195, 431, 489, 588, 702, 717, 1011
TscAI CASTG 6 cut(s) 90, 150, 214, 312, 1078, 1308
TseFI GTSAC 4 cut(s) 7, 181, 307, 1303
TseI GCWGC 1 cut(s) 1061
Tsp45I GTSAC 4 cut(s) 7, 181, 307, 1303
TspDTI ATGAA 5 cut(s) 347, 359, 743, 1214, 1296
TspGWI ACGGA 1 cut(s) 641
TspMI CCCGGG 1 cut(s) 1027
TspRI CASTG 6 cut(s) 90, 150, 214, 312, 1078, 1308
Van91I CCANNNNNTGG 2 cut(s) 462, 980
Vha464I CTTAAG 1 cut(s) 701
VpaK11BI GGWCC 1 cut(s) 1166
XagI CCTNNNNNAGG 1 cut(s) 551
XapI RAATTY 1 cut(s) 1283
XceI RCATGY 2 cut(s) 381, 1186
XmaI CCCGGG 1 cut(s) 1027
XspI CTAG 1 cut(s) 641
ZrmI AGTACT 1 cut(s) 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.