Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0004286

Physical Location & Seq

Genomic Coordinates Forward (+)

16175873 .. 16183993

Gene Structure 8121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGAGGGATTCGCAATCAGCATCAACATCAGGCATGTCTCTTCGGTGTGTTGCATTTAAAGAAGGCCTTCATGCAGGAATTCTTGATGGCAAAAGCATAGATGTCTCCTTTGATAACTTCCCATACTATTTGAGTGAGAATACGAAGAAAGTTTTGATTGCAGCCTCATTTATACACTTGAAACATAAAGAGCATGTGAAGTATACCTCAGAGCTTACAGCTGTGAACCCTCGCATTTTGCTCTCTGGTCCTTCAGGGTCTGAGATATATCAGGAGATGTTGGCAAAGGCTCTTGCGCAGTATTTTGGGGCTAAGTTGCTCATATTTGATAGCCACTCTTTTTTGGGTGGTTTATCATCAAGGGAAGCTGAGCTGCTCAAGGATGGATTGAATGCAGAAACACTCTGCAGCTTGACCAAACAAAGTCCTGCACTGCCAGACTTGGCTAAGAACACTGATCTGTCAGCTTCTGAGACAGAGGCACCGGGATCGTCAAATGCACCTTTGAATGACATGGAATCCCAACCAAAGATGGAGACTGACACCCTACCCTCTTCCTCAGGGACATCGAAGAATTACTTGTTTAAAATAGGTGACAGAGTAAGATTTATTGCTTCATCTTCTGTTGCCTTGTATACTACATCATCTTCTTCACGGGGCCCAGTGAGCGGAATGCGCGGAGAGGTTGTGCTGCTTTTTGAGGAAAATCCTTTTTCAAAAGTCGGTGTAAAGTTTGATAAACCAATACCTGATGGTGTTGATCTGGGGGGTCTATGTAAAGGCAATGGGTACTTCTGCAATGTCTCTGAACTTCGATTGGAAACCCCGGGCGCAGAAGATTTGGACAAATTACTTATCAACACATTGTTTGAGGCTGTACTAAGTGAGAGCAGAAATTCCCCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCCCTGGTGGGAAATTCCGATTCATTTTCTACATTCAGAGCCAGACTTGATAAGCTTCCAGATAATGTGGTTGTAATTGGTTCTCATACTCAAACTGACAGTCGCAAGGAGAAGTCGCACCCTGGTGGTTTGCTTTTCACAAAGTTTGGCAGCAATCAAACTGCTCTTCTTGACCTGGCTTTCCCGGATAGTTTTGGAAGACTACATGAGAGAGGGAAAGAAGTTCCCAAGGCGACAAAACTTCTGACTAAACTCTTTCCCAATAAAGTTACCATTCATATGCCGCAGGATGAAGCACTTCTTACCTCGTGGAAGCAACAATTGGATCGAGACGTTGAAACCCTAAAAATGAAGGGAAACTTGAATCACTTGCGTACTGTTCTGGGTCGATGTGGACTGGAATGTGAAGGACTTGAGACACTATGCATCAAGGATCAAACACTTACAAACGAAAGTTCAGACAAGGTAGTTGGATGGGCTTTAATCCATCATTTAATGCAGAATCCTGAAGCTGATCCAGAAACAAAAGTTGTTCTGTCTGCGGAGAGCATCCAGTATGGACTTGAAATTTTACAGGCTCTCCAGAATGAAACGAAGAGTTTGAAGTCTCTTAAGGATGTTGTTACGGAAAATGAATTTGAGAAAAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGAGTTACATTTGATGATATTGGCGCCCTTGAGAATGTGAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAAAGGCCAGAGCTTTTCTGCAAGGGGCAATTGACCAAGCCTTGCAAGGGTATCCTTTTATTTGGTCCCCCTGGAACAGGCAAGACAATGCTTGCCAAGGCTGTGGCTACGGAAGCTGGTGCAAACTTTATCAATATATCCATGTCGAGCATCACATCAAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTTTCGCTGGCCAGTAAAATTGCGCCTAGTGTTGTTTTCGTAGACGAAGTGGACAGTATGTTGGGCCGACGGGAAAATCCAGGTGAGCATGAGGCAATGCGTAAGATGAAGAATGAATTCATGGTAAATTGGGATGGTTTACGAACAAAAGAAGCGGAGCGAGTTCTTGTACTGGCAGCCACTAATAGGCCCTTTGACCTTGATGAGGCTGTCATTCGAAGACTGCCGCGCAGGTTGATGGTAAATTTGCCAGATGCTCCAAATAGAGCAAAAATATTGAAAGTCATACTGGCAAAAGAGGACTTGTCTCCCACTGTTGATTTTGATGCGATTGCAAGCATGACGGATGGGTATTCAGGAAGTGACCTCAAGAATCTTTGTGTAACTGCCGCACATCGTCCAATTAAAGAGATTTTGGAGAAGGAAAAAAAGGAGCATGCTGTAGCCGTAGCGGAAGGTAAACCTGTTCCATCTTTGAGTGGCAGTGCTGATATACGGCCTCTGAACATGGATGACTTCAAAGATGCTCACGAACGGGTATGTGCTAGTGTTTCATCGGAGTCCGTGAACATGACTGAGCTTGTACAATGGAACGAACTTTATGGCGAAGGGGGTTCAAGAAGAAAGAAGGCCCTTAGCTACTTCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FHA

Protein Analysis

846

Amino Acids

92.82

Weight (kDa)

5.93

Isoelectric Point (pI)

33.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	444 - 503	9.3e-20	Domain of unknown function (DUF7751)
AAA	PF00004	581 - 711	8.3e-38	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	735 - 774	4.4e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62130 AT1G62130 AT4G24860 AT4G24860 AT4G24860 AT4G24860
fragaria_vesca	FvH4_5g08070 FvH4_5g08070
malus_domestica	MD06G1143300.v1.1 MD14G1158300.v1.1
prunus_persica	Prupe.5G152500_v2.0.a1 Prupe.5G152500_v2.0.a1
pyrus_communis	pycom06g13290 pycom06g13300 pycom14g13190 pycom14g13200 pycom14g13210
rosa_chinensis	RchiOBHm_Chr7g0190401
rosa_laevigata	RLG00000004536
rosa_multiflora	Rmu_co8223142.1_g000001 Rmu_co8252631.1_g000001 Rmu_co8344673.1_g000001 Rmu_sc0028964.1_g000001 Rmu_sc0028964.1_g000003
rosa_roxburghii	Rroxscaffold_3G00264670
rosa_rugosa	Rorug06G0504400 Rorug06G0504400
rosa_samantha	Rh7AG110200 Rh7BG112700 Rh7CG115000 Rh7DG113200
rosa_wichuraiana	Rw7G009560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	297
Acc36I	ACCTGC	1 cut(s)	2109
AccB1I	GGYRCC	2 cut(s)	481, 1637
AccBSI	CCGCTC	1 cut(s)	669
AccI	GTMKAC	3 cut(s)	203, 635, 1929
AccII	CGCG	2 cut(s)	678, 2116
AciI	CCGC	8 cut(s)	669, 678, 1217, 1475, 2042, 2114, 2277, 2339
AclWI	GGATC	4 cut(s)	496, 1266, 1374, 1442
AcoI	YGGCCR	1 cut(s)	1896
AcsI	RAATTY	7 cut(s)	78, 895, 946, 1500, 1568, 2003, 2131
AcuI	CTGAAG	2 cut(s)	237, 1461
AcyI	GRCGYC	1 cut(s)	1638
AdeI	CACNNNGTG	1 cut(s)	1607
AfaI	GTAC	5 cut(s)	791, 879, 1309, 2058, 2472
AfiI	CCNNNNNNNGG	5 cut(s)	668, 1736, 1766, 2073, 2092
AflII	CTTAAG	1 cut(s)	1544
AjnI	CCWGG	5 cut(s)	936, 1054, 1107, 1759, 1966
AjuI	GAANNNNNNNTTGG	2 cut(s)	1238, 1270
AleI	CACNNNNGTG	1 cut(s)	1056
Alw26I	GTCTC	9 cut(s)	42, 109, 467, 530, 808, 1257, 1343, 1545, 2199
AlwI	GGATC	4 cut(s)	496, 1266, 1374, 1442
AlwNI	CAGNNNCTG	2 cut(s)	260, 470
Ama87I	CYCGRG	1 cut(s)	826
AoxI	GGCC	8 cut(s)	64, 658, 1694, 1896, 1951, 2075, 2384, 2517
ApaI	GGGCCC	1 cut(s)	662
ApeKI	GCWGC	6 cut(s)	161, 373, 408, 691, 1083, 2063
ApoI	RAATTY	7 cut(s)	78, 895, 946, 1500, 1568, 2003, 2131
ArsI	GACNNNNNNTTYG	2 cut(s)	1018, 1050
Asp700I	GAANNNNTTC	3 cut(s)	66, 1230, 2003
AspLEI	GCGC	6 cut(s)	298, 678, 833, 1640, 1912, 2118
AspS9I	GGNCC	7 cut(s)	248, 658, 659, 1754, 1951, 2076, 2518
AsuC2I	CCSGG	4 cut(s)	486, 827, 828, 1118
AsuHPI	GGTGA	5 cut(s)	605, 1687, 1871, 1877, 1982
AsuII	TTCGAA	1 cut(s)	2104
AvaI	CYCGRG	1 cut(s)	826
AvaII	GGWCC	2 cut(s)	248, 1754
AxyI	CCTNAGG	1 cut(s)	559
BaeGI	GKGCMC	1 cut(s)	662
BalI	TGGCCA	1 cut(s)	1898
BanI	GGYRCC	2 cut(s)	481, 1637
BanII	GRGCYC	1 cut(s)	662
BauI	CACGAG	1 cut(s)	1240
BbsI	GAAGAC	2 cut(s)	1138, 2113
BbvI	GCAGC	6 cut(s)	173, 360, 420, 678, 1095, 2075
BceAI	ACGGC	2 cut(s)	2318, 2399
BcgI	CGANNNNNNTGC	2 cut(s)	471, 505
BciT130I	CCWGG	5 cut(s)	938, 1056, 1109, 1761, 1968
BciVI	GTATCC	2 cut(s)	1651, 1751
BcnI	CCSGG	4 cut(s)	486, 827, 828, 1118
BcoDI	GTCTC	9 cut(s)	42, 109, 467, 530, 808, 1257, 1343, 1545, 2199
BfaI	CTAG	3 cut(s)	1605, 1914, 2433
BfmI	CTRYAG	2 cut(s)	406, 2328
BfoI	RGCGCY	1 cut(s)	1641
BfrI	CTTAAG	1 cut(s)	1544
BfuAI	ACCTGC	1 cut(s)	2109
BfuI	GTATCC	2 cut(s)	1651, 1751
BisI	GCNGC	9 cut(s)	162, 374, 409, 692, 1084, 1217, 2064, 2114, 2277
BlpI	GCTNAGC	1 cut(s)	369
BlsI	GCNGC	9 cut(s)	163, 375, 410, 693, 1085, 1218, 2065, 2115, 2278
Bme1390I	CCNGG	9 cut(s)	486, 827, 828, 938, 1056, 1109, 1118, 1761, 1968
Bme18I	GGWCC	2 cut(s)	248, 1754
BmeT110I	CYCGRG	1 cut(s)	826
BmgT120I	GGNCC	7 cut(s)	248, 658, 659, 1754, 1951, 2076, 2518
BmiI	GGNNCC	5 cut(s)	483, 659, 660, 1639, 1756
BmrFI	CCNGG	9 cut(s)	486, 827, 828, 938, 1056, 1109, 1118, 1761, 1968
BmrI	ACTGGG	1 cut(s)	656
BmsI	GCATC	9 cut(s)	29, 913, 1368, 1491, 1668, 1848, 2131, 2203, 2401
BmuI	ACTGGG	1 cut(s)	656
BpiI	GAAGAC	2 cut(s)	1138, 2113
BpmI	CTGGAG	1 cut(s)	1499
Bpu10I	CCTNAGC	1 cut(s)	2522
Bpu1102I	GCTNAGC	1 cut(s)	369
Bpu14I	TTCGAA	1 cut(s)	2104
BpuEI	CTTGAG	4 cut(s)	362, 1367, 1664, 2240
BpuMI	CCSGG	4 cut(s)	486, 827, 828, 1118
BsaHI	GRCGYC	1 cut(s)	1638
BsaJI	CCNNGG	7 cut(s)	825, 826, 936, 1054, 1161, 1759, 1785
BsaXI	ACNNNNNCTCC	4 cut(s)	672, 702, 1497, 1527
Bsc4I	CCNNNNNNNGG	5 cut(s)	668, 1736, 1766, 2073, 2092
Bse1I	ACTGG	6 cut(s)	662, 1335, 1486, 1899, 2064, 2181
Bse21I	CCTNAGG	1 cut(s)	559
Bse3DI	GCAATG	3 cut(s)	790, 805, 1989
BseBI	CCWGG	5 cut(s)	938, 1056, 1109, 1761, 1968
BseDI	CCNNGG	7 cut(s)	825, 826, 936, 1054, 1161, 1759, 1785
BseGI	GGATG	8 cut(s)	388, 1228, 1412, 1482, 1555, 2026, 2239, 2404
BseLI	CCNNNNNNNGG	5 cut(s)	668, 1736, 1766, 2073, 2092
BseMI	GCAATG	3 cut(s)	790, 805, 1989
BseMII	CTCAG	7 cut(s)	222, 252, 360, 462, 573, 918, 2454
BseNI	ACTGG	6 cut(s)	662, 1335, 1486, 1899, 2064, 2181
BseSI	GKGCMC	1 cut(s)	662
BseXI	GCAGC	6 cut(s)	173, 360, 420, 678, 1095, 2075
BsgI	GTGCAG	1 cut(s)	414
Bsh1236I	CGCG	2 cut(s)	678, 2116
BshFI	GGCC	8 cut(s)	66, 660, 1696, 1898, 1953, 2077, 2386, 2519
BshNI	GGYRCC	2 cut(s)	481, 1637
BsiHKCI	CYCGRG	1 cut(s)	826
BsiSI	CCGG	3 cut(s)	485, 827, 1118
BslFI	GGGAC	3 cut(s)	577, 919, 1740
BslI	CCNNNNNNNGG	5 cut(s)	668, 1736, 1766, 2073, 2092
BsmAI	GTCTC	9 cut(s)	42, 109, 467, 530, 808, 1257, 1343, 1545, 2199
BsmBI	CGTCTC	1 cut(s)	1257
BsmFI	GGGAC	3 cut(s)	577, 919, 1740
BsmI	GAATGC	2 cut(s)	397, 678
BsnI	GGCC	8 cut(s)	66, 660, 1696, 1898, 1953, 2077, 2386, 2519
BsoBI	CYCGRG	1 cut(s)	826
Bsp119I	TTCGAA	1 cut(s)	2104
Bsp120I	GGGCCC	1 cut(s)	658
Bsp1286I	GDGCHC	1 cut(s)	662
Bsp1407I	TGTACA	1 cut(s)	2470
Bsp143I	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
Bsp1720I	GCTNAGC	1 cut(s)	369
BspACI	CCGC	8 cut(s)	669, 678, 1217, 1475, 2042, 2114, 2277, 2339
BspANI	GGCC	8 cut(s)	66, 660, 1696, 1898, 1953, 2077, 2386, 2519
BspCNI	CTCAG	7 cut(s)	221, 253, 361, 463, 572, 919, 2455
BspFNI	CGCG	2 cut(s)	678, 2116
BspHI	TCATGA	1 cut(s)	915
BspLI	GGNNCC	5 cut(s)	483, 659, 660, 1639, 1756
BspMAI	CTGCAG	1 cut(s)	410
BspMI	ACCTGC	1 cut(s)	2109
BspPI	GGATC	4 cut(s)	496, 1266, 1374, 1442
BspQI	GCTCTTC	1 cut(s)	1104
BspT104I	TTCGAA	1 cut(s)	2104
BspT107I	GGYRCC	2 cut(s)	481, 1637
BspTI	CTTAAG	1 cut(s)	1544
BsrBI	CCGCTC	1 cut(s)	669
BsrDI	GCAATG	3 cut(s)	790, 805, 1989
BsrGI	TGTACA	1 cut(s)	2470
BsrI	ACTGG	6 cut(s)	662, 1335, 1486, 1899, 2064, 2181
BssECI	CCNNGG	7 cut(s)	825, 826, 936, 1054, 1161, 1759, 1785
BssMI	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
BssNAI	GTATAC	2 cut(s)	204, 636
BssNI	GRCGYC	1 cut(s)	1638
BssSI	CACGAG	1 cut(s)	1240
BssT1I	CCWWGG	2 cut(s)	1161, 1785
Bst1107I	GTATAC	2 cut(s)	204, 636
Bst2BI	CACGAG	1 cut(s)	1240
Bst2UI	CCWGG	5 cut(s)	938, 1056, 1109, 1761, 1968
Bst4CI	ACNGT	4 cut(s)	1034, 1312, 1943, 2203
Bst6I	CTCTTC	4 cut(s)	45, 559, 1104, 1523
BstACI	GRCGYC	1 cut(s)	1638
BstAFI	CTTAAG	1 cut(s)	1544
BstAUI	TGTACA	1 cut(s)	2470
BstBI	TTCGAA	1 cut(s)	2104
BstC8I	GCNNGC	4 cut(s)	1782, 1896, 2224, 2325
BstENI	CCTNNNNNAGG	2 cut(s)	1764, 2090
BstF5I	GGATG	8 cut(s)	388, 1228, 1412, 1482, 1555, 2026, 2239, 2404
BstFNI	CGCG	2 cut(s)	678, 2116
BstH2I	RGCGCY	1 cut(s)	1641
BstHHI	GCGC	6 cut(s)	298, 678, 833, 1640, 1912, 2118
BstKTI	GATC	6 cut(s)	460, 491, 763, 1261, 1369, 1450
BstMAI	GTCTC	9 cut(s)	42, 109, 467, 530, 808, 1257, 1343, 1545, 2199
BstMBI	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
BstMWI	GCNNNNNNNGC	3 cut(s)	666, 675, 1802
BstNI	CCWGG	5 cut(s)	938, 1056, 1109, 1761, 1968
BstNSI	RCATGY	3 cut(s)	37, 197, 2327
BstSCI	CCNGG	9 cut(s)	484, 825, 826, 936, 1054, 1107, 1116, 1759, 1966
BstSFI	CTRYAG	2 cut(s)	406, 2328
BstSLI	GKGCMC	1 cut(s)	662
BstUI	CGCG	2 cut(s)	678, 2116
BstV1I	GCAGC	6 cut(s)	173, 360, 420, 678, 1095, 2075
BstV2I	GAAGAC	2 cut(s)	1138, 2113
BstXI	CCANNNNNNTGG	1 cut(s)	1792
BstZ17I	GTATAC	2 cut(s)	204, 636
Bsu36I	CCTNAGG	1 cut(s)	559
BsuI	GTATCC	2 cut(s)	1651, 1751
BsuRI	GGCC	8 cut(s)	66, 660, 1696, 1898, 1953, 2077, 2386, 2519
BtsCI	GGATG	8 cut(s)	388, 1228, 1412, 1482, 1555, 2026, 2239, 2404
BtsI	GCAGTG	2 cut(s)	431, 2377
BtsIMutI	CAGTG	5 cut(s)	431, 453, 669, 2199, 2377
BveI	ACCTGC	1 cut(s)	2109
Cac8I	GCNNGC	4 cut(s)	1782, 1896, 2224, 2325
CaiI	CAGNNNCTG	2 cut(s)	260, 470
CciI	TCATGA	1 cut(s)	915
CfoI	GCGC	6 cut(s)	298, 678, 833, 1640, 1912, 2118
Cfr13I	GGNCC	7 cut(s)	248, 658, 659, 1754, 1951, 2076, 2518
Cfr9I	CCCGGG	1 cut(s)	826
Csp6I	GTAC	5 cut(s)	790, 878, 1308, 2057, 2471
CviQI	GTAC	5 cut(s)	790, 878, 1308, 2057, 2471
DinI	GGCGCC	1 cut(s)	1639
DpnI	GATC	6 cut(s)	459, 490, 762, 1260, 1368, 1449
DpnII	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
DraI	TTTAAA	2 cut(s)	58, 586
DraIII	CACNNNGTG	1 cut(s)	1607
EaeI	YGGCCR	1 cut(s)	1896
Eam1104I	CTCTTC	4 cut(s)	45, 559, 1104, 1523
EarI	CTCTTC	4 cut(s)	45, 559, 1104, 1523
Eco130I	CCWWGG	2 cut(s)	1161, 1785
Eco147I	AGGCCT	1 cut(s)	66
Eco24I	GRGCYC	1 cut(s)	662
Eco47I	GGWCC	2 cut(s)	248, 1754
Eco57I	CTGAAG	2 cut(s)	237, 1461
Eco81I	CCTNAGG	1 cut(s)	559
Eco88I	CYCGRG	1 cut(s)	826
EcoNI	CCTNNNNNAGG	2 cut(s)	1764, 2090
EcoO109I	RGGNCCY	3 cut(s)	658, 2076, 2518
EcoRI	GAATTC	2 cut(s)	78, 2003
EcoRII	CCWGG	5 cut(s)	936, 1054, 1107, 1759, 1966
EcoT14I	CCWWGG	2 cut(s)	1161, 1785
EcoT22I	ATGCAT	1 cut(s)	1361
EcoT38I	GRGCYC	1 cut(s)	662
EgeI	GGCGCC	1 cut(s)	1639
EheI	GGCGCC	1 cut(s)	1639
ErhI	CCWWGG	2 cut(s)	1161, 1785
Esp3I	CGTCTC	1 cut(s)	1257
FalI	AAGNNNNNCTT	8 cut(s)	51, 83, 563, 595, 1218, 1250, 1277, 1309
FaqI	GGGAC	3 cut(s)	577, 919, 1740
FauNDI	CATATG	1 cut(s)	1212
FblI	GTMKAC	3 cut(s)	203, 635, 1929
Fnu4HI	GCNGC	9 cut(s)	162, 374, 409, 692, 1084, 1217, 2064, 2114, 2277
FokI	GGATG	8 cut(s)	395, 1235, 1419, 1469, 1562, 2033, 2246, 2411
FriOI	GRGCYC	1 cut(s)	662
Fsp4HI	GCNGC	9 cut(s)	162, 374, 409, 692, 1084, 1217, 2064, 2114, 2277
FspBI	CTAG	3 cut(s)	1605, 1914, 2433
FspI	TGCGCA	1 cut(s)	297
GlaI	GCGC	6 cut(s)	297, 677, 832, 1639, 1911, 2117
GluI	GCNGC	9 cut(s)	162, 374, 409, 692, 1084, 1217, 2064, 2114, 2277
GsuI	CTGGAG	1 cut(s)	1499
HaeII	RGCGCY	1 cut(s)	1641
HaeIII	GGCC	8 cut(s)	66, 660, 1696, 1898, 1953, 2077, 2386, 2519
HapII	CCGG	3 cut(s)	485, 827, 1118
HhaI	GCGC	6 cut(s)	298, 678, 833, 1640, 1912, 2118
Hin1I	GRCGYC	1 cut(s)	1638
Hin6I	GCGC	6 cut(s)	296, 676, 831, 1638, 1910, 2116
HinP1I	GCGC	6 cut(s)	296, 676, 831, 1638, 1910, 2116
HindIII	AAGCTT	1 cut(s)	986
HinfI	GANTC	7 cut(s)	8, 518, 953, 1297, 1435, 2260, 2447
HpaII	CCGG	3 cut(s)	485, 827, 1118
HphI	GGTGA	5 cut(s)	605, 1687, 1871, 1877, 1982
Hpy166II	GTNNAC	9 cut(s)	204, 226, 636, 1328, 1930, 1939, 2027, 2348, 2455
Hpy8I	GTNNAC	9 cut(s)	204, 226, 636, 1328, 1930, 1939, 2027, 2348, 2455
Hpy99I	CGWCG	1 cut(s)	1959
HpyCH4III	ACNGT	4 cut(s)	1034, 1312, 1943, 2203
HpyCH4IV	ACGT	1 cut(s)	1266
HpyF10VI	GCNNNNNNNGC	3 cut(s)	666, 675, 1802
HpySE526I	ACGT	1 cut(s)	1266
Hsp92I	GRCGYC	1 cut(s)	1638
HspAI	GCGC	6 cut(s)	296, 676, 831, 1638, 1910, 2116
KasI	GGCGCC	1 cut(s)	1637
Kzo9I	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
LguI	GCTCTTC	1 cut(s)	1104
LmnI	GCTCC	3 cut(s)	2044, 2149, 2320
Lsp1109I	GCAGC	6 cut(s)	173, 360, 420, 678, 1095, 2075
LweI	GCATC	9 cut(s)	29, 913, 1368, 1491, 1668, 1848, 2131, 2203, 2401
MaeI	CTAG	3 cut(s)	1605, 1914, 2433
MaeII	ACGT	1 cut(s)	1266
MaeIII	GTNAC	7 cut(s)	593, 1201, 1555, 1607, 1618, 2249, 2269
MalI	GATC	6 cut(s)	459, 490, 762, 1260, 1368, 1449
MbiI	CCGCTC	1 cut(s)	669
MboI	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
MfeI	CAATTG	2 cut(s)	1253, 1718
MhlI	GDGCHC	1 cut(s)	662
MlsI	TGGCCA	1 cut(s)	1898
MluNI	TGGCCA	1 cut(s)	1898
Mly113I	GGCGCC	1 cut(s)	1638
MlyI	GAGTC	1 cut(s)	2456
MmeI	TCCRAC	1 cut(s)	1384
Mox20I	TGGCCA	1 cut(s)	1898
Mph1103I	ATGCAT	1 cut(s)	1361
MroXI	GAANNNNTTC	3 cut(s)	66, 1230, 2003
MscI	TGGCCA	1 cut(s)	1898
MseI	TTAA	6 cut(s)	57, 585, 1415, 1427, 1545, 2292
MslI	CAYNNNNRTG	3 cut(s)	1056, 1211, 1849
Msp20I	TGGCCA	1 cut(s)	1898
MspA1I	CMGCKG	1 cut(s)	221
MspCI	CTTAAG	1 cut(s)	1544
MspI	CCGG	3 cut(s)	485, 827, 1118
MspR9I	CCNGG	9 cut(s)	486, 827, 828, 938, 1056, 1109, 1118, 1761, 1968
MunI	CAATTG	2 cut(s)	1253, 1718
Mva1269I	GAATGC	2 cut(s)	397, 678
MvaI	CCWGG	5 cut(s)	938, 1056, 1109, 1761, 1968
MvnI	CGCG	2 cut(s)	678, 2116
MwoI	GCNNNNNNNGC	3 cut(s)	666, 675, 1802
NarI	GGCGCC	1 cut(s)	1638
NciI	CCSGG	4 cut(s)	486, 827, 828, 1118
NdeI	CATATG	1 cut(s)	1212
NdeII	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
NlaIV	GGNNCC	5 cut(s)	483, 659, 660, 1639, 1756
NmuCI	GTSAC	3 cut(s)	593, 1607, 2249
NsbI	TGCGCA	1 cut(s)	297
NsiI	ATGCAT	1 cut(s)	1361
NspI	RCATGY	3 cut(s)	37, 197, 2327
NspV	TTCGAA	1 cut(s)	2104
OliI	CACNNNNGTG	1 cut(s)	1056
PaeI	GCATGC	1 cut(s)	2327
PagI	TCATGA	1 cut(s)	915
PceI	AGGCCT	1 cut(s)	66
PciSI	GCTCTTC	1 cut(s)	1104
PctI	GAATGC	2 cut(s)	397, 678
PdmI	GAANNNNTTC	3 cut(s)	66, 1230, 2003
PfeI	GAWTC	6 cut(s)	8, 518, 953, 1297, 1435, 2260
PfoI	TCCNGGA	1 cut(s)	1116
PkrI	GCNGC	9 cut(s)	163, 375, 410, 693, 1085, 1218, 2065, 2115, 2278
PleI	GAGTC	1 cut(s)	2455
PluTI	GGCGCC	1 cut(s)	1641
PpsI	GAGTC	1 cut(s)	2455
Psp6I	CCWGG	5 cut(s)	936, 1054, 1107, 1759, 1966
PspGI	CCWGG	5 cut(s)	936, 1054, 1107, 1759, 1966
PspN4I	GGNNCC	5 cut(s)	483, 659, 660, 1639, 1756
PspOMI	GGGCCC	1 cut(s)	658
PspPI	GGNCC	7 cut(s)	248, 658, 659, 1754, 1951, 2076, 2518
PstI	CTGCAG	1 cut(s)	410
PstNI	CAGNNNCTG	2 cut(s)	260, 470
PvuII	CAGCTG	1 cut(s)	221
RsaI	GTAC	5 cut(s)	791, 879, 1309, 2058, 2472
RsaNI	GTAC	5 cut(s)	790, 878, 1308, 2057, 2471
RseI	CAYNNNNRTG	3 cut(s)	1056, 1211, 1849
SapI	GCTCTTC	1 cut(s)	1104
SaqAI	TTAA	6 cut(s)	57, 585, 1415, 1427, 1545, 2292
SatI	GCNGC	9 cut(s)	162, 374, 409, 692, 1084, 1217, 2064, 2114, 2277
Sau3AI	GATC	6 cut(s)	457, 488, 760, 1258, 1366, 1447
Sau96I	GGNCC	7 cut(s)	248, 658, 659, 1754, 1951, 2076, 2518
SchI	GAGTC	1 cut(s)	2456
ScrFI	CCNGG	9 cut(s)	486, 827, 828, 938, 1056, 1109, 1118, 1761, 1968
SduI	GDGCHC	1 cut(s)	662
SfaNI	GCATC	9 cut(s)	29, 913, 1368, 1491, 1668, 1848, 2131, 2203, 2401
SfcI	CTRYAG	2 cut(s)	406, 2328
SfoI	GGCGCC	1 cut(s)	1639
SfuI	TTCGAA	1 cut(s)	2104
SinI	GGWCC	2 cut(s)	248, 1754
SmaI	CCCGGG	1 cut(s)	828
SmiMI	CAYNNNNRTG	3 cut(s)	1056, 1211, 1849
SmlI	CTYRAG	5 cut(s)	377, 1346, 1544, 1643, 2255
SmoI	CTYRAG	5 cut(s)	377, 1346, 1544, 1643, 2255
SphI	GCATGC	1 cut(s)	2327
SseBI	AGGCCT	1 cut(s)	66
SsiI	CCGC	8 cut(s)	669, 678, 1217, 1475, 2042, 2114, 2277, 2339
SspDI	GGCGCC	1 cut(s)	1637
SspI	AATATT	1 cut(s)	2163
SspMI	CTAG	3 cut(s)	1605, 1914, 2433
StuI	AGGCCT	1 cut(s)	66
StyD4I	CCNGG	9 cut(s)	484, 825, 826, 936, 1054, 1107, 1116, 1759, 1966
StyI	CCWWGG	2 cut(s)	1161, 1785
TaaI	ACNGT	4 cut(s)	1034, 1312, 1943, 2203
TaiI	ACGT	1 cut(s)	1269
TaqI	TCGA	6 cut(s)	569, 814, 1261, 1321, 1835, 2104
TatI	WGTACW	3 cut(s)	877, 2056, 2470
TauI	GCSGC	3 cut(s)	1219, 2116, 2279
TfiI	GAWTC	6 cut(s)	8, 518, 953, 1297, 1435, 2260
Tru1I	TTAA	6 cut(s)	57, 585, 1415, 1427, 1545, 2292
Tru9I	TTAA	6 cut(s)	57, 585, 1415, 1427, 1545, 2292
TscAI	CASTG	5 cut(s)	438, 460, 669, 2206, 2377
TseFI	GTSAC	3 cut(s)	593, 1607, 2249
TseI	GCWGC	6 cut(s)	161, 373, 408, 691, 1083, 2063
Tsp45I	GTSAC	3 cut(s)	593, 1607, 2249
TspGWI	ACGGA	4 cut(s)	1574, 1814, 2246, 2440
TspMI	CCCGGG	1 cut(s)	826
TspRI	CASTG	5 cut(s)	438, 460, 669, 2206, 2377
Vha464I	CTTAAG	1 cut(s)	1544
VpaK11BI	GGWCC	2 cut(s)	248, 1754
XagI	CCTNNNNNAGG	2 cut(s)	1764, 2090
XapI	RAATTY	7 cut(s)	78, 895, 946, 1500, 1568, 2003, 2131
XceI	RCATGY	3 cut(s)	37, 197, 2327
XmaI	CCCGGG	1 cut(s)	826
XmiI	GTMKAC	3 cut(s)	203, 635, 1929
XmnI	GAANNNNTTC	3 cut(s)	66, 1230, 2003
XspI	CTAG	3 cut(s)	1605, 1914, 2433
Zsp2I	ATGCAT	1 cut(s)	1361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.