pycom14g14840

Anthranilate phosphoribosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
17525773 .. 17528511
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1227 bp
ATGGCAGTTTCAACGCAGCTCCAGTCTGTGACCAGTCTTGCTTCGTTGACTCACCGCACTAAGCTCGAATTCCGAAGCAGCTGCTGCATTCCTTCAGTTATCAGAACAGAGCAGAGAAGCTCAGCTGCTGGCCGTGTCAATGCCGTGCTCTCCTCCGCGCCCAGCGTTTCTGAGAAACCAAATTCGAAGCCGCAGATAGCTTCTTTCAGTGAGTTGATCGAGTCTTTGATTAGTCGGGTGGATTTGACGGAGGAGGAAGCTGAAGCGTCGTTGGAGTTCTTGCTGGATGATGCCAATGAGGGTTTGATCAGCGCGTTTCTTGTGTTGTTGAGAGCCAAAGGAGAGACTTATGAAGAAATTGTGGGATTGGCAAAGGCAATGATGAAGCACAGTTTGAAGATAGAAGACTTAGGGGATGTGGTTGACATTGTTGGAACTGGTGGTGATGGCGCAAACACGGTAAACATTTCCACAGGGGCTGCAATACTTGCTGCAGCTTGTGGTGCAAAAGTTGCAAAGCAAGGAAGCCGTTCGAGTTCCTCTGCATGTGGAAGTGCTGATGTATTAGAAGCTTTGGGGATAATAATTGATTTGGACCCTGAGGGGGTAACTAGATGTGTGAACGAAGCAGGCATTGGCTTTATGATGGCACCCAAATATCATCCAGCAATGCATATTGTTCACCCTGTCAGAAAGAAACTGAAAGTAAAGACCGTGTTTAACATATTGGGACCCATGTTGAATCCAGCAAGAGTACCTTTTGCTGTTGTTGGTGTATACAAGGATGACTTGGTCTTAAAGATGGCCAAAGCTTTGCAAAGCTTTGGAATGAAGAGAGCATTAGTCGTTCACTCCGAAGGCTTGGACGAAATGAGTCCACTTGGACCCGGGCATATCCTTGATGTAACTCCTAACAAGATTAAGGAGTTCTCCTTTGATCCATTGGATTTTGGAATTCCTCGCTGCACCTTAGATGATTTGCGGGGTGGAGGCCCGGAGTATAATGCTGATGCACTAAAGCGTGTGTTGTCAGGGGAGAAGGGTCCCGTTGCAGATGCATTTATCTTAACCGCTGCAGCAGCTCTCTTGGTCAGCGGTCGGGTGAACACCTTAGCTAAAGGTATCTCTTTGGCTCGTGAAACACAAATGTCAGGGAAAGCTATTAGGATCCTTGACCGATGGGTAGCAATCTCCAATACAATGATAAAGGATACAATTATTTACTAA

Protein Analysis

409

Amino Acids

43.33

Weight (kDa)

6.42

Isoelectric Point (pI)

45.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_trans_3N PF02885 71 - 130 5.3e-15 Glycosyl transferase family, helical bundle domain
Glycos_transf_3 PF00591 138 - 387 2.3e-96 Glycosyl transferase family, a/b domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 649
AccI GTMKAC 1 cut(s) 777
AccII CGCG 2 cut(s) 158, 314
AciI CCGC 6 cut(s) 55, 156, 191, 982, 1071, 1095
AclWI GGATC 3 cut(s) 932, 1162, 1175
AcoI YGGCCR 2 cut(s) 130, 804
AcsI RAATTY 3 cut(s) 68, 181, 954
AcuI CTGAAG 2 cut(s) 78, 282
AfaI GTAC 1 cut(s) 756
AfiI CCNNNNNNNGG 1 cut(s) 604
AgsI TTSAA 3 cut(s) 12, 397, 742
AjuI GAANNNNNNNTTGG 2 cut(s) 618, 650
Alw21I GWGCWC 1 cut(s) 150
Alw26I GTCTC 1 cut(s) 338
AlwI GGATC 3 cut(s) 932, 1162, 1175
AlwNI CAGNNNCTG 3 cut(s) 84, 128, 479
Ama87I CYCGRG 1 cut(s) 887
AoxI GGCC 3 cut(s) 130, 804, 991
ApoI RAATTY 3 cut(s) 68, 181, 954
Asp700I GAANNNNTTC 1 cut(s) 529
AspLEI GCGC 3 cut(s) 160, 314, 452
AspS9I GGNCC 5 cut(s) 595, 731, 884, 992, 1043
AsuC2I CCSGG 3 cut(s) 888, 889, 995
AsuHPI GGTGA 4 cut(s) 44, 455, 674, 1114
AsuII TTCGAA 1 cut(s) 185
AvaI CYCGRG 1 cut(s) 887
AvaII GGWCC 4 cut(s) 595, 731, 884, 1043
AxyI CCTNAGG 1 cut(s) 600
BalI TGGCCA 1 cut(s) 806
BamHI GGATCC 1 cut(s) 1167
BanI GGYRCC 1 cut(s) 649
BauI CACGAG 1 cut(s) 1134
BbsI GAAGAC 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 150
BccI CCATC 4 cut(s) 440, 640, 796, 1173
BceAI ACGGC 3 cut(s) 117, 128, 513
BcgI CGANNNNNNTGC 4 cut(s) 46, 63, 80, 97
BciVI GTATCC 1 cut(s) 1204
BclI TGATCA 1 cut(s) 306
BcnI CCSGG 3 cut(s) 888, 889, 995
BcoDI GTCTC 1 cut(s) 338
BfaI CTAG 1 cut(s) 612
BfmI CTRYAG 2 cut(s) 492, 1074
BfuI GTATCC 1 cut(s) 1204
BlpI GCTNAGC 1 cut(s) 121
Bme1390I CCNGG 3 cut(s) 888, 889, 995
Bme18I GGWCC 4 cut(s) 595, 731, 884, 1043
BmeT110I CYCGRG 1 cut(s) 887
BmgT120I GGNCC 5 cut(s) 595, 731, 884, 992, 1043
BmiI GGNNCC 8 cut(s) 597, 651, 732, 733, 886, 1044, 1045, 1169
BmrFI CCNGG 3 cut(s) 888, 889, 995
BmsI GCATC 3 cut(s) 280, 1000, 1045
BpiI GAAGAC 1 cut(s) 411
BpmI CTGGAG 1 cut(s) 5
Bpu10I CCTNAGC 1 cut(s) 1111
Bpu1102I GCTNAGC 1 cut(s) 121
Bpu14I TTCGAA 1 cut(s) 185
BpuMI CCSGG 3 cut(s) 888, 889, 995
BsaJI CCNNGG 1 cut(s) 887
Bsc4I CCNNNNNNNGG 1 cut(s) 604
Bse1I ACTGG 3 cut(s) 22, 33, 442
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 2 cut(s) 384, 675
BseDI CCNNGG 1 cut(s) 887
BseGI GGATG 4 cut(s) 292, 421, 661, 790
BseLI CCNNNNNNNGG 1 cut(s) 604
BseMI GCAATG 2 cut(s) 384, 675
BseMII CTCAG 3 cut(s) 135, 162, 591
BseNI ACTGG 3 cut(s) 22, 33, 442
BseRI GAGGAG 2 cut(s) 142, 266
BseYI CCCAGC 1 cut(s) 161
BsgI GTGCAG 1 cut(s) 949
Bsh1236I CGCG 2 cut(s) 158, 314
Bsh1285I CGRYCG 1 cut(s) 1099
BshFI GGCC 3 cut(s) 132, 806, 993
BshNI GGYRCC 1 cut(s) 649
BsiEI CGRYCG 1 cut(s) 1099
BsiHKAI GWGCWC 1 cut(s) 150
BsiHKCI CYCGRG 1 cut(s) 887
BsiSI CCGG 2 cut(s) 888, 995
BslFI GGGAC 2 cut(s) 744, 1029
BslI CCNNNNNNNGG 1 cut(s) 604
BsmAI GTCTC 1 cut(s) 338
BsmFI GGGAC 2 cut(s) 744, 1029
BsmI GAATGC 1 cut(s) 87
BsnI GGCC 3 cut(s) 132, 806, 993
BsoBI CYCGRG 1 cut(s) 887
Bsp119I TTCGAA 1 cut(s) 185
Bsp1286I GDGCHC 1 cut(s) 150
Bsp143I GATC 4 cut(s) 216, 306, 937, 1167
Bsp1720I GCTNAGC 1 cut(s) 121
BspACI CCGC 6 cut(s) 55, 156, 191, 982, 1071, 1095
BspANI GGCC 3 cut(s) 132, 806, 993
BspCNI CTCAG 3 cut(s) 134, 163, 592
BspFNI CGCG 2 cut(s) 158, 314
BspLI GGNNCC 8 cut(s) 597, 651, 732, 733, 886, 1044, 1045, 1169
BspMAI CTGCAG 2 cut(s) 496, 1078
BspPI GGATC 3 cut(s) 932, 1162, 1175
BspT104I TTCGAA 1 cut(s) 185
BspT107I GGYRCC 1 cut(s) 649
BsrDI GCAATG 2 cut(s) 384, 675
BsrI ACTGG 3 cut(s) 22, 33, 442
BssECI CCNNGG 1 cut(s) 887
BssMI GATC 4 cut(s) 216, 306, 937, 1167
BssNAI GTATAC 1 cut(s) 778
BssSI CACGAG 1 cut(s) 1134
Bst1107I GTATAC 1 cut(s) 778
Bst2BI CACGAG 1 cut(s) 1134
Bst4CI ACNGT 3 cut(s) 392, 460, 715
Bst6I CTCTTC 1 cut(s) 827
BstAPI GCANNNNNTGC 3 cut(s) 84, 488, 512
BstBI TTCGAA 1 cut(s) 185
BstC8I GCNNGC 2 cut(s) 130, 631
BstDEI CTNAG 7 cut(s) 60, 121, 171, 409, 600, 970, 1111
BstF5I GGATG 4 cut(s) 292, 421, 661, 790
BstFNI CGCG 2 cut(s) 158, 314
BstHHI GCGC 3 cut(s) 160, 314, 452
BstKTI GATC 4 cut(s) 219, 309, 940, 1170
BstMAI GTCTC 1 cut(s) 338
BstMBI GATC 4 cut(s) 216, 306, 937, 1167
BstMCI CGRYCG 1 cut(s) 1099
BstMWI GCNNNNNNNGC 5 cut(s) 84, 488, 503, 512, 1079
BstNSI RCATGY 1 cut(s) 549
BstSCI CCNGG 3 cut(s) 886, 887, 993
BstSFI CTRYAG 2 cut(s) 492, 1074
BstUI CGCG 2 cut(s) 158, 314
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 1 cut(s) 1167
BstYI RGATCY 1 cut(s) 1167
BstZ17I GTATAC 1 cut(s) 778
Bsu36I CCTNAGG 1 cut(s) 600
BsuI GTATCC 1 cut(s) 1204
BsuRI GGCC 3 cut(s) 132, 806, 993
BtsCI GGATG 4 cut(s) 292, 421, 661, 790
BtsIMutI CAGTG 1 cut(s) 214
Cac8I GCNNGC 2 cut(s) 130, 631
CaiI CAGNNNCTG 3 cut(s) 84, 128, 479
CfoI GCGC 3 cut(s) 160, 314, 452
Cfr13I GGNCC 5 cut(s) 595, 731, 884, 992, 1043
Cfr9I CCCGGG 1 cut(s) 887
CseI GACGC 1 cut(s) 255
Csp6I GTAC 1 cut(s) 755
CviAII CATG 2 cut(s) 546, 736
CviQI GTAC 1 cut(s) 755
DdeI CTNAG 7 cut(s) 60, 121, 171, 409, 600, 970, 1111
DpnI GATC 4 cut(s) 218, 308, 939, 1169
DpnII GATC 4 cut(s) 216, 306, 937, 1167
EaeI YGGCCR 2 cut(s) 130, 804
Eam1104I CTCTTC 1 cut(s) 827
EarI CTCTTC 1 cut(s) 827
Eco47I GGWCC 4 cut(s) 595, 731, 884, 1043
Eco57I CTGAAG 2 cut(s) 78, 282
Eco81I CCTNAGG 1 cut(s) 600
Eco88I CYCGRG 1 cut(s) 887
EcoO109I RGGNCCY 2 cut(s) 731, 1043
EcoRI GAATTC 2 cut(s) 68, 954
EcoT22I ATGCAT 2 cut(s) 675, 1060
FaeI CATG 2 cut(s) 549, 739
FaiI YATR 9 cut(s) 351, 547, 644, 675, 725, 737, 778, 894, 1002
FalI AAGNNNNNCTT 4 cut(s) 742, 774, 773, 805
FaqI GGGAC 2 cut(s) 744, 1029
FatI CATG 2 cut(s) 545, 735
FauI CCCGC 1 cut(s) 975
FbaI TGATCA 1 cut(s) 306
FblI GTMKAC 1 cut(s) 777
FokI GGATG 4 cut(s) 299, 428, 648, 797
FspBI CTAG 1 cut(s) 612
GlaI GCGC 3 cut(s) 159, 313, 451
GsaI CCCAGC 1 cut(s) 165
GsuI CTGGAG 1 cut(s) 5
HaeIII GGCC 3 cut(s) 132, 806, 993
HapII CCGG 2 cut(s) 888, 995
HgaI GACGC 1 cut(s) 255
HhaI GCGC 3 cut(s) 160, 314, 452
Hin1II CATG 2 cut(s) 549, 739
Hin6I GCGC 3 cut(s) 158, 312, 450
HinP1I GCGC 3 cut(s) 158, 312, 450
HincII GTYRAC 2 cut(s) 48, 424
HindII GTYRAC 2 cut(s) 48, 424
HindIII AAGCTT 3 cut(s) 570, 810, 820
HinfI GANTC 4 cut(s) 49, 221, 742, 874
HpaII CCGG 2 cut(s) 888, 995
HphI GGTGA 4 cut(s) 44, 455, 674, 1114
Hpy166II GTNNAC 9 cut(s) 48, 424, 463, 622, 682, 778, 850, 878, 1105
Hpy188I TCNGA 5 cut(s) 74, 104, 172, 692, 856
Hpy188III TCNNGA 1 cut(s) 1136
Hpy8I GTNNAC 9 cut(s) 48, 424, 463, 622, 682, 778, 850, 878, 1105
Hpy99I CGWCG 1 cut(s) 271
HpyAV CCTTC 3 cut(s) 102, 851, 1033
HpyCH4III ACNGT 3 cut(s) 392, 460, 715
HpyF10VI GCNNNNNNNGC 5 cut(s) 84, 488, 503, 512, 1079
HpyF3I CTNAG 7 cut(s) 60, 121, 171, 409, 600, 970, 1111
Hsp92II CATG 2 cut(s) 549, 739
HspAI GCGC 3 cut(s) 158, 312, 450
KflI GGGWCCC 2 cut(s) 731, 1043
Ksp22I TGATCA 1 cut(s) 306
Kzo9I GATC 4 cut(s) 216, 306, 937, 1167
LmnI GCTCC 1 cut(s) 24
LweI GCATC 3 cut(s) 280, 1000, 1045
MaeI CTAG 1 cut(s) 612
MaeIII GTNAC 3 cut(s) 28, 607, 904
MalI GATC 4 cut(s) 218, 308, 939, 1169
MboI GATC 4 cut(s) 216, 306, 937, 1167
MboII GAAGA 4 cut(s) 365, 409, 416, 844
MflI RGATCY 1 cut(s) 1167
MhlI GDGCHC 1 cut(s) 150
MlsI TGGCCA 1 cut(s) 806
MluCI AATT 6 cut(s) 68, 181, 357, 585, 954, 1215
MluNI TGGCCA 1 cut(s) 806
MlyI GAGTC 3 cut(s) 43, 230, 883
MmeI TCCRAC 2 cut(s) 252, 412
MnlI CCTC 8 cut(s) 163, 244, 247, 292, 550, 595, 969, 983
Mox20I TGGCCA 1 cut(s) 806
Mph1103I ATGCAT 2 cut(s) 675, 1060
MroXI GAANNNNTTC 1 cut(s) 529
MscI TGGCCA 1 cut(s) 806
MseI TTAA 4 cut(s) 720, 797, 921, 1067
Msp20I TGGCCA 1 cut(s) 806
MspA1I CMGCKG 4 cut(s) 81, 125, 1073, 1095
MspI CCGG 2 cut(s) 888, 995
MspR9I CCNGG 3 cut(s) 888, 889, 995
Mva1269I GAATGC 1 cut(s) 87
MvnI CGCG 2 cut(s) 158, 314
MwoI GCNNNNNNNGC 5 cut(s) 84, 488, 503, 512, 1079
NciI CCSGG 3 cut(s) 888, 889, 995
NdeII GATC 4 cut(s) 216, 306, 937, 1167
NlaIII CATG 2 cut(s) 549, 739
NlaIV GGNNCC 8 cut(s) 597, 651, 732, 733, 886, 1044, 1045, 1169
NmuCI GTSAC 1 cut(s) 28
NsiI ATGCAT 2 cut(s) 675, 1060
NspI RCATGY 1 cut(s) 549
NspV TTCGAA 1 cut(s) 185
PcsI WCGNNNNNNNCGW 1 cut(s) 852
PctI GAATGC 1 cut(s) 87
PdmI GAANNNNTTC 1 cut(s) 529
PfeI GAWTC 1 cut(s) 742
PflFI GACNNNGTC 1 cut(s) 791
PleI GAGTC 3 cut(s) 43, 229, 882
PpsI GAGTC 3 cut(s) 43, 229, 882
PpuMI RGGWCCY 2 cut(s) 731, 1043
Psp5II RGGWCCY 2 cut(s) 731, 1043
PspFI CCCAGC 1 cut(s) 161
PspN4I GGNNCC 8 cut(s) 597, 651, 732, 733, 886, 1044, 1045, 1169
PspPI GGNCC 5 cut(s) 595, 731, 884, 992, 1043
PspPPI RGGWCCY 2 cut(s) 731, 1043
PstI CTGCAG 2 cut(s) 496, 1078
PstNI CAGNNNCTG 3 cut(s) 84, 128, 479
PsuI RGATCY 1 cut(s) 1167
PsyI GACNNNGTC 1 cut(s) 791
PvuII CAGCTG 2 cut(s) 81, 125
RsaI GTAC 1 cut(s) 756
RsaNI GTAC 1 cut(s) 755
SaqAI TTAA 4 cut(s) 720, 797, 921, 1067
Sau3AI GATC 4 cut(s) 216, 306, 937, 1167
Sau96I GGNCC 5 cut(s) 595, 731, 884, 992, 1043
SchI GAGTC 3 cut(s) 43, 230, 883
ScrFI CCNGG 3 cut(s) 888, 889, 995
SduI GDGCHC 1 cut(s) 150
SfaNI GCATC 3 cut(s) 280, 1000, 1045
SfcI CTRYAG 2 cut(s) 492, 1074
SfuI TTCGAA 1 cut(s) 185
SinI GGWCC 4 cut(s) 595, 731, 884, 1043
SmaI CCCGGG 1 cut(s) 889
Sse9I AATT 6 cut(s) 68, 181, 357, 585, 954, 1215
SsiI CCGC 6 cut(s) 55, 156, 191, 982, 1071, 1095
SspMI CTAG 1 cut(s) 612
StyD4I CCNGG 3 cut(s) 886, 887, 993
TaaI ACNGT 3 cut(s) 392, 460, 715
TaqI TCGA 4 cut(s) 66, 185, 219, 533
TaqII GACCGA 1 cut(s) 1191
TasI AATT 6 cut(s) 68, 181, 357, 585, 954, 1215
TauI GCSGC 1 cut(s) 193
TfiI GAWTC 1 cut(s) 742
Tru1I TTAA 4 cut(s) 720, 797, 921, 1067
Tru9I TTAA 4 cut(s) 720, 797, 921, 1067
TscAI CASTG 1 cut(s) 214
TseFI GTSAC 1 cut(s) 28
Tsp45I GTSAC 1 cut(s) 28
TspDTI ATGAA 3 cut(s) 366, 398, 845
TspGWI ACGGA 1 cut(s) 263
TspMI CCCGGG 1 cut(s) 887
TspRI CASTG 1 cut(s) 214
Tth111I GACNNNGTC 1 cut(s) 791
VpaK11BI GGWCC 4 cut(s) 595, 731, 884, 1043
XapI RAATTY 3 cut(s) 68, 181, 954
XceI RCATGY 1 cut(s) 549
XmaI CCCGGG 1 cut(s) 887
XmiI GTMKAC 1 cut(s) 777
XmnI GAANNNNTTC 1 cut(s) 529
XspI CTAG 1 cut(s) 612
Zsp2I ATGCAT 2 cut(s) 675, 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.