Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002935

Physical Location & Seq

Genomic Coordinates Forward (+)

1050037 .. 1051695

Gene Structure 1659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGTGTCACAAGACTCACCCCCAAATCCCTCCTCAAGCATTTTCCACCAGTTCATAATCTCAGACTCCATTTCTGCTCAAAACCATCATCTCGAAAGCCAGCACCTTGACGCTTATCCGCCTGCGTTTCAAACTAGTACCACATTTCCACAAGCTCTCGGAGTTCTCCCCAGCATTCACTCCCTTGGCGAAAGAATGTCCCGATCAGTAGGACTTGTTCAAGCTCCTACCGGCACAGCAATGGAGAACCAAGTGCAGCGGCTTTCGCTCTCCCTCGGTTCCCATCTGCTTGTTCCTTCTGGCCAGTACCGGCACCACAACTTCCACACTGGGGAGGAATCCGGGGAGGCTTGCAACCGGGGAGTTGAGCACGTAGGCGACGAGTACTGCTTCATGGGAGGCACGCTTGCTTCACATTCAAGTGCGCTGAATCGATCTTGCTCCACTTCTTATGGAGCAGAATCTCTAGCTGCTGTCATTGCGAATTCGAAATATCTTAAACCAGCTCAGTCCCTCTTGGAAGAGATTGTTAATGTTGGCGGACAATTGGTTGACATTAGCAATGAGAAACATGTGGGGAAATTGTATGGAGAAGGGCGGCGAGGCGGTATGGGGCTCTCCTCTGAACTGAGAGCAGAGCTTTCTTGCAATGGTGGGCTCATGAATGCCGACAAACACGAAATGCAGGCTAGGCTTGCAAACCTTATCACATTGTTGGAACAGGTTGAGGACAGATGTGAGAAGTACTACCATCAAATGGAACAAGTGATGTCATCATTTGAGATGGTGGTAGGGGAAGGGGCAGCCAAGTCCTACACAGCTCTGGCTCTCAAGGCCATGTCCAGGCATTTTTGCAGCTTGAGAGATGGCATAGTTTCTCATATCTATGCCGAGAAGCGAAAGCTGCTGCAAGATGTTCCGAAAATCAGTAGCGGGTTATCGCAACTGAACTTGTTTGACAGAGAGTGCAGGCACAAGAGAATGTCCCTTCAACAGCTCGGCATTTTTCAGAGCCAGCGCCAAGCTTTCAGACCGATTCGTGGATTGCCAGAGACCTCTGTTGCGATTCTTCGCACTTGGCTTTTCGAACACTTCCTCCACCCTTACCCCAATGACAACGAAAAGCTGCTGTTGGCATCACAAACAGGGCTGTCCAAGAACCAAGTCTCGAATTGGTTCATAAACGCGCGTGTCCGACTGTGGAAACCTATGATTGAAGAGATGTACAAGGAAGAGCTTGGGGAGTCTTCAGAGGACTCTAACTCTTTAGCCGGCGGTTCCCTGACCGGCGAAGGCAACACGGATCCGACAGAGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

440

Amino Acids

48.52

Weight (kDa)

6.1

Isoelectric Point (pI)

49.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	159 - 291	1.3e-37	Associated with HOX
Homeobox_KN	PF05920	360 - 399	2.7e-18	Homeobox KN domain
Homeodomain	PF00046	367 - 399	7.9e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002935)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75430 AT1G75430
fragaria_vesca	FvH4_2g39270 FvH4_2g39270 FvH4_2g39270
malus_domestica	MD08G1024300.v1.1 MD15G1021900.v1.1
prunus_persica	Prupe.1G373700_v2.0.a1 Prupe.1G373700_v2.0.a1 Prupe.1G373700_v2.0.a1 Prupe.1G373700_v2.0.a1 Prupe.1G373700_v2.0.a1
pyrus_communis	pycom08g01910 pycom15g01820
rosa_chinensis	RchiOBHm_Chr6g0245211 RchiOBHm_Chr6g0301741
rosa_laevigata	RLG00000011226 RLG00000015315 RLG00000021395
rosa_multiflora	Rmu_sc0001288.1_g000006 Rmu_sc0005454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00242160 Rroxscaffold_7G00166460 Rroxscaffold_7G00215350
rosa_rugosa	Rorug05G0512900 Rorug05G0512900 Rorug06G0308600 Rorug06G0308700.1 Rorug06G0308800.1 Rorug06G0308900.1
rosa_samantha	Rh6AG028000 Rh6AG028100 Rh6AG421100 Rh6BG024200 Rh6BG427800 Rh6CG434400 Rh6DG421300
rosa_wichuraiana	Rw6G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	312
AccB7I	CCANNNNNTGG	1 cut(s)	757
AccII	CGCG	2 cut(s)	1187, 1189
AciI	CCGC	7 cut(s)	119, 259, 540, 598, 606, 933, 1275
AclWI	GGATC	2 cut(s)	1298, 1311
AcoI	YGGCCR	1 cut(s)	301
AcsI	RAATTY	1 cut(s)	484
AcuI	CTGAAG	1 cut(s)	1233
AfaI	GTAC	5 cut(s)	139, 308, 386, 746, 1226
AfiI	CCNNNNNNNGG	4 cut(s)	331, 757, 843, 1040
AflIII	ACRYGT	1 cut(s)	571
AgsI	TTSAA	5 cut(s)	131, 221, 420, 992, 1217
AhlI	ACTAGT	1 cut(s)	134
AjnI	CCWGG	1 cut(s)	842
AloI	GAACNNNNNNTCC	2 cut(s)	1080, 1112
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	2 cut(s)	1046, 1171
AlwI	GGATC	2 cut(s)	1298, 1311
AoxI	GGCC	2 cut(s)	301, 834
ApeKI	GCWGC	7 cut(s)	256, 470, 803, 855, 904, 907, 1126
ApoI	RAATTY	1 cut(s)	484
Asp700I	GAANNNNTTC	1 cut(s)	1175
AspLEI	GCGC	3 cut(s)	427, 1020, 1189
AsuC2I	CCSGG	2 cut(s)	343, 359
AsuHPI	GGTGA	1 cut(s)	9
AsuII	TTCGAA	2 cut(s)	488, 1086
BalI	TGGCCA	1 cut(s)	303
BamHI	GGATCC	1 cut(s)	1303
BanI	GGYRCC	1 cut(s)	312
BanII	GRGCYC	2 cut(s)	618, 660
BbsI	GAAGAC	1 cut(s)	1239
Bbv12I	GWGCWC	1 cut(s)	372
BbvI	GCAGC	7 cut(s)	268, 457, 815, 867, 891, 894, 1113
BccI	CCATC	5 cut(s)	93, 291, 759, 778, 860
BciT130I	CCWGG	1 cut(s)	844
BcnI	CCSGG	2 cut(s)	343, 359
BcoDI	GTCTC	2 cut(s)	1046, 1171
BcuI	ACTAGT	1 cut(s)	134
BfaI	CTAG	3 cut(s)	135, 467, 690
BfoI	RGCGCY	1 cut(s)	1021
BisI	GCNGC	9 cut(s)	257, 260, 471, 599, 804, 856, 905, 908, 1127
BlsI	GCNGC	9 cut(s)	258, 261, 472, 600, 805, 857, 906, 909, 1128
BmcAI	AGTACT	2 cut(s)	386, 746
Bme1390I	CCNGG	3 cut(s)	343, 359, 844
BmiI	GGNNCC	4 cut(s)	280, 314, 1279, 1305
BmrFI	CCNGG	3 cut(s)	343, 359, 844
BmrI	ACTGGG	1 cut(s)	339
BmsI	GCATC	1 cut(s)	1145
BmuI	ACTGGG	1 cut(s)	339
BpiI	GAAGAC	1 cut(s)	1239
Bpu14I	TTCGAA	2 cut(s)	488, 1086
BpuEI	CTTGAG	3 cut(s)	19, 815, 880
BpuMI	CCSGG	2 cut(s)	343, 359
Bsa29I	ATCGAT	1 cut(s)	433
BsaAI	YACGTR	1 cut(s)	373
BsaI	GGTCTC	1 cut(s)	1046
BsaJI	CCNNGG	4 cut(s)	184, 274, 342, 358
BsaXI	ACNNNNNCTCC	2 cut(s)	1080, 1110
Bsc4I	CCNNNNNNNGG	4 cut(s)	331, 757, 843, 1040
Bse118I	RCCGGY	4 cut(s)	230, 309, 1271, 1286
Bse1I	ACTGG	3 cut(s)	49, 304, 334
Bse3DI	GCAATG	4 cut(s)	246, 477, 568, 655
BseBI	CCWGG	1 cut(s)	844
BseCI	ATCGAT	1 cut(s)	433
BseDI	CCNNGG	4 cut(s)	184, 274, 342, 358
BseLI	CCNNNNNNNGG	4 cut(s)	331, 757, 843, 1040
BseMI	GCAATG	4 cut(s)	246, 477, 568, 655
BseMII	CTCAG	3 cut(s)	75, 521, 620
BseNI	ACTGG	3 cut(s)	49, 304, 334
BseRI	GAGGAG	2 cut(s)	22, 610
BseXI	GCAGC	7 cut(s)	268, 457, 815, 867, 891, 894, 1113
BseYI	CCCAGC	1 cut(s)	170
BsgI	GTGCAG	2 cut(s)	275, 988
Bsh1236I	CGCG	2 cut(s)	1187, 1189
BshFI	GGCC	2 cut(s)	303, 836
BshNI	GGYRCC	1 cut(s)	312
BshVI	ATCGAT	1 cut(s)	433
BsiHKAI	GWGCWC	1 cut(s)	372
BsiSI	CCGG	6 cut(s)	231, 310, 342, 358, 1272, 1287
BslFI	GGGAC	3 cut(s)	184, 496, 970
BslI	CCNNNNNNNGG	4 cut(s)	331, 757, 843, 1040
BsmAI	GTCTC	2 cut(s)	1046, 1171
BsmFI	GGGAC	3 cut(s)	184, 496, 970
BsmI	GAATGC	2 cut(s)	174, 670
BsnI	GGCC	2 cut(s)	303, 836
Bso31I	GGTCTC	1 cut(s)	1046
Bsp119I	TTCGAA	2 cut(s)	488, 1086
Bsp1286I	GDGCHC	3 cut(s)	372, 618, 660
Bsp1407I	TGTACA	1 cut(s)	1224
Bsp143I	GATC	3 cut(s)	203, 434, 1303
BspACI	CCGC	7 cut(s)	119, 259, 540, 598, 606, 933, 1275
BspANI	GGCC	2 cut(s)	303, 836
BspCNI	CTCAG	3 cut(s)	74, 520, 621
BspDI	ATCGAT	1 cut(s)	433
BspFNI	CGCG	2 cut(s)	1187, 1189
BspHI	TCATGA	1 cut(s)	660
BspLI	GGNNCC	4 cut(s)	280, 314, 1279, 1305
BspPI	GGATC	2 cut(s)	1298, 1311
BspQI	GCTCTTC	1 cut(s)	1227
BspT104I	TTCGAA	2 cut(s)	488, 1086
BspT107I	GGYRCC	1 cut(s)	312
BspTNI	GGTCTC	1 cut(s)	1046
BsrDI	GCAATG	4 cut(s)	246, 477, 568, 655
BsrFI	RCCGGY	4 cut(s)	230, 309, 1271, 1286
BsrGI	TGTACA	1 cut(s)	1224
BsrI	ACTGG	3 cut(s)	49, 304, 334
BssAI	RCCGGY	4 cut(s)	230, 309, 1271, 1286
BssECI	CCNNGG	4 cut(s)	184, 274, 342, 358
BssMI	GATC	3 cut(s)	203, 434, 1303
BssT1I	CCWWGG	1 cut(s)	184
Bst2UI	CCWGG	1 cut(s)	844
Bst4CI	ACNGT	1 cut(s)	1200
Bst6I	CTCTTC	3 cut(s)	516, 1212, 1227
BstAUI	TGTACA	1 cut(s)	1224
BstBAI	YACGTR	1 cut(s)	373
BstBI	TTCGAA	2 cut(s)	488, 1086
BstDEI	CTNAG	3 cut(s)	61, 507, 629
BstFNI	CGCG	2 cut(s)	1187, 1189
BstH2I	RGCGCY	1 cut(s)	1021
BstHHI	GCGC	3 cut(s)	427, 1020, 1189
BstKTI	GATC	3 cut(s)	206, 437, 1306
BstMAI	GTCTC	2 cut(s)	1046, 1171
BstMBI	GATC	3 cut(s)	203, 434, 1303
BstMWI	GCNNNNNNNGC	6 cut(s)	265, 479, 691, 695, 833, 904
BstNI	CCWGG	1 cut(s)	844
BstNSI	RCATGY	1 cut(s)	575
BstSCI	CCNGG	3 cut(s)	341, 357, 842
BstUI	CGCG	2 cut(s)	1187, 1189
BstV1I	GCAGC	7 cut(s)	268, 457, 815, 867, 891, 894, 1113
BstV2I	GAAGAC	1 cut(s)	1239
BstX2I	RGATCY	1 cut(s)	1303
BstYI	RGATCY	1 cut(s)	1303
Bsu15I	ATCGAT	1 cut(s)	433
BsuRI	GGCC	2 cut(s)	303, 836
BsuTUI	ATCGAT	1 cut(s)	433
BtsIMutI	CAGTG	1 cut(s)	327
CciI	TCATGA	1 cut(s)	660
CfoI	GCGC	3 cut(s)	427, 1020, 1189
Cfr10I	RCCGGY	4 cut(s)	230, 309, 1271, 1286
ClaI	ATCGAT	1 cut(s)	433
CseI	GACGC	1 cut(s)	119
Csp6I	GTAC	5 cut(s)	138, 307, 385, 745, 1225
CviAII	CATG	4 cut(s)	394, 572, 661, 838
CviQI	GTAC	5 cut(s)	138, 307, 385, 745, 1225
DdeI	CTNAG	3 cut(s)	61, 507, 629
DpnI	GATC	3 cut(s)	205, 436, 1305
DpnII	GATC	3 cut(s)	203, 434, 1303
EaeI	YGGCCR	1 cut(s)	301
Eam1104I	CTCTTC	3 cut(s)	516, 1212, 1227
EarI	CTCTTC	3 cut(s)	516, 1212, 1227
EciI	GGCGGA	2 cut(s)	108, 555
Eco130I	CCWWGG	1 cut(s)	184
Eco24I	GRGCYC	2 cut(s)	618, 660
Eco31I	GGTCTC	1 cut(s)	1046
Eco57I	CTGAAG	1 cut(s)	1233
EcoRI	GAATTC	1 cut(s)	484
EcoRII	CCWGG	1 cut(s)	842
EcoT14I	CCWWGG	1 cut(s)	184
EcoT38I	GRGCYC	2 cut(s)	618, 660
ErhI	CCWWGG	1 cut(s)	184
FaeI	CATG	4 cut(s)	397, 575, 664, 841
FaqI	GGGAC	3 cut(s)	184, 496, 970
FatI	CATG	4 cut(s)	393, 571, 660, 837
FauI	CCCGC	1 cut(s)	926
Fnu4HI	GCNGC	9 cut(s)	257, 260, 471, 599, 804, 856, 905, 908, 1127
FriOI	GRGCYC	2 cut(s)	618, 660
Fsp4HI	GCNGC	9 cut(s)	257, 260, 471, 599, 804, 856, 905, 908, 1127
FspBI	CTAG	3 cut(s)	135, 467, 690
GlaI	GCGC	3 cut(s)	426, 1019, 1188
GluI	GCNGC	9 cut(s)	257, 260, 471, 599, 804, 856, 905, 908, 1127
GsaI	CCCAGC	1 cut(s)	174
HaeII	RGCGCY	1 cut(s)	1021
HaeIII	GGCC	2 cut(s)	303, 836
HapII	CCGG	6 cut(s)	231, 310, 342, 358, 1272, 1287
HgaI	GACGC	1 cut(s)	119
HhaI	GCGC	3 cut(s)	427, 1020, 1189
Hin1II	CATG	4 cut(s)	397, 575, 664, 841
Hin6I	GCGC	3 cut(s)	425, 1018, 1187
HinP1I	GCGC	3 cut(s)	425, 1018, 1187
HincII	GTYRAC	1 cut(s)	553
HindII	GTYRAC	1 cut(s)	553
HindIII	AAGCTT	1 cut(s)	1023
HinfI	GANTC	9 cut(s)	14, 65, 338, 430, 461, 1036, 1066, 1244, 1256
HpaII	CCGG	6 cut(s)	231, 310, 342, 358, 1272, 1287
HphI	GGTGA	1 cut(s)	9
Hpy166II	GTNNAC	1 cut(s)	553
Hpy188I	TCNGA	9 cut(s)	64, 161, 625, 921, 1011, 1031, 1196, 1252, 1308
Hpy188III	TCNNGA	4 cut(s)	92, 201, 661, 1168
Hpy8I	GTNNAC	1 cut(s)	553
Hpy99I	CGWCG	1 cut(s)	383
HpyAV	CCTTC	5 cut(s)	306, 587, 791, 998, 1286
HpyCH4III	ACNGT	1 cut(s)	1200
HpyCH4IV	ACGT	1 cut(s)	372
HpyCH4V	TGCA	8 cut(s)	256, 354, 648, 685, 698, 855, 910, 969
HpyF10VI	GCNNNNNNNGC	6 cut(s)	265, 479, 691, 695, 833, 904
HpyF3I	CTNAG	3 cut(s)	61, 507, 629
HpySE526I	ACGT	1 cut(s)	372
Hsp92II	CATG	4 cut(s)	397, 575, 664, 841
HspAI	GCGC	3 cut(s)	425, 1018, 1187
KroI	GCCGGC	1 cut(s)	1271
KroNI	GCCGGC	1 cut(s)	1273
Kzo9I	GATC	3 cut(s)	203, 434, 1303
LguI	GCTCTTC	1 cut(s)	1227
LmnI	GCTCC	3 cut(s)	229, 446, 455
Lsp1109I	GCAGC	7 cut(s)	268, 457, 815, 867, 891, 894, 1113
LweI	GCATC	1 cut(s)	1145
MaeI	CTAG	3 cut(s)	135, 467, 690
MaeII	ACGT	1 cut(s)	372
MaeIII	GTNAC	1 cut(s)	6
MalI	GATC	3 cut(s)	205, 436, 1305
MboI	GATC	3 cut(s)	203, 434, 1303
MboII	GAAGA	5 cut(s)	533, 1061, 1229, 1239, 1244
MfeI	CAATTG	1 cut(s)	545
MflI	RGATCY	1 cut(s)	1303
MhlI	GDGCHC	3 cut(s)	372, 618, 660
MlsI	TGGCCA	1 cut(s)	303
MluCI	AATT	5 cut(s)	484, 545, 581, 1171, 1315
MluNI	TGGCCA	1 cut(s)	303
MlyI	GAGTC	4 cut(s)	8, 59, 1250, 1253
MmeI	TCCRAC	2 cut(s)	696, 1219
Mox20I	TGGCCA	1 cut(s)	303
MroNI	GCCGGC	1 cut(s)	1271
MroXI	GAANNNNTTC	1 cut(s)	1175
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	3 cut(s)	498, 531, 1318
MslI	CAYNNNNRTG	3 cut(s)	239, 420, 885
Msp20I	TGGCCA	1 cut(s)	303
MspA1I	CMGCKG	1 cut(s)	259
MspI	CCGG	6 cut(s)	231, 310, 342, 358, 1272, 1287
MspR9I	CCNGG	3 cut(s)	343, 359, 844
MunI	CAATTG	1 cut(s)	545
Mva1269I	GAATGC	2 cut(s)	174, 670
MvaI	CCWGG	1 cut(s)	844
MvnI	CGCG	2 cut(s)	1187, 1189
MwoI	GCNNNNNNNGC	6 cut(s)	265, 479, 691, 695, 833, 904
NaeI	GCCGGC	1 cut(s)	1273
NciI	CCSGG	2 cut(s)	343, 359
NdeII	GATC	3 cut(s)	203, 434, 1303
NgoMIV	GCCGGC	1 cut(s)	1271
NlaIII	CATG	4 cut(s)	397, 575, 664, 841
NlaIV	GGNNCC	4 cut(s)	280, 314, 1279, 1305
NmeAIII	GCCGAG	2 cut(s)	916, 978
NmuCI	GTSAC	1 cut(s)	6
NspI	RCATGY	1 cut(s)	575
NspV	TTCGAA	2 cut(s)	488, 1086
PagI	TCATGA	1 cut(s)	660
PciI	ACATGT	1 cut(s)	571
PciSI	GCTCTTC	1 cut(s)	1227
PcsI	WCGNNNNNNNCGW	1 cut(s)	378
PctI	GAATGC	2 cut(s)	174, 670
PdiI	GCCGGC	1 cut(s)	1273
PdmI	GAANNNNTTC	1 cut(s)	1175
PfeI	GAWTC	5 cut(s)	338, 430, 461, 1036, 1066
PflMI	CCANNNNNTGG	1 cut(s)	757
PkrI	GCNGC	9 cut(s)	258, 261, 472, 600, 805, 857, 906, 909, 1128
PleI	GAGTC	4 cut(s)	8, 59, 1250, 1252
PpsI	GAGTC	4 cut(s)	8, 59, 1250, 1252
Ppu21I	YACGTR	1 cut(s)	373
PscI	ACATGT	1 cut(s)	571
Psp6I	CCWGG	1 cut(s)	842
PspFI	CCCAGC	1 cut(s)	170
PspGI	CCWGG	1 cut(s)	842
PspN4I	GGNNCC	4 cut(s)	280, 314, 1279, 1305
PsrI	GAACNNNNNNTAC	2 cut(s)	201, 233
PsuI	RGATCY	1 cut(s)	1303
RsaI	GTAC	5 cut(s)	139, 308, 386, 746, 1226
RsaNI	GTAC	5 cut(s)	138, 307, 385, 745, 1225
RseI	CAYNNNNRTG	3 cut(s)	239, 420, 885
SapI	GCTCTTC	1 cut(s)	1227
SaqAI	TTAA	3 cut(s)	498, 531, 1318
SatI	GCNGC	9 cut(s)	257, 260, 471, 599, 804, 856, 905, 908, 1127
Sau3AI	GATC	3 cut(s)	203, 434, 1303
ScaI	AGTACT	2 cut(s)	386, 746
SchI	GAGTC	4 cut(s)	8, 59, 1250, 1253
ScrFI	CCNGG	3 cut(s)	343, 359, 844
SduI	GDGCHC	3 cut(s)	372, 618, 660
SfaNI	GCATC	1 cut(s)	1145
SfuI	TTCGAA	2 cut(s)	488, 1086
SmiMI	CAYNNNNRTG	3 cut(s)	239, 420, 885
SmlI	CTYRAG	3 cut(s)	34, 830, 859
SmoI	CTYRAG	3 cut(s)	34, 830, 859
SpeI	ACTAGT	1 cut(s)	134
Sse9I	AATT	5 cut(s)	484, 545, 581, 1171, 1315
SsiI	CCGC	7 cut(s)	119, 259, 540, 598, 606, 933, 1275
SspMI	CTAG	3 cut(s)	135, 467, 690
StyD4I	CCNGG	3 cut(s)	341, 357, 842
StyI	CCWWGG	1 cut(s)	184
TaaI	ACNGT	1 cut(s)	1200
TaiI	ACGT	1 cut(s)	375
TaqI	TCGA	5 cut(s)	93, 433, 488, 1086, 1169
TaqII	GACCGA	1 cut(s)	1048
TasI	AATT	5 cut(s)	484, 545, 581, 1171, 1315
TatI	WGTACW	3 cut(s)	384, 744, 1224
TauI	GCSGC	2 cut(s)	262, 601
TfiI	GAWTC	5 cut(s)	338, 430, 461, 1036, 1066
Tru1I	TTAA	3 cut(s)	498, 531, 1318
Tru9I	TTAA	3 cut(s)	498, 531, 1318
TscAI	CASTG	1 cut(s)	334
TseFI	GTSAC	1 cut(s)	6
TseI	GCWGC	7 cut(s)	256, 470, 803, 855, 904, 907, 1126
Tsp45I	GTSAC	1 cut(s)	6
TspDTI	ATGAA	4 cut(s)	43, 382, 677, 1168
TspGWI	ACGGA	1 cut(s)	1316
TspRI	CASTG	1 cut(s)	334
Van91I	CCANNNNNTGG	1 cut(s)	757
XapI	RAATTY	1 cut(s)	484
XceI	RCATGY	1 cut(s)	575
XmnI	GAANNNNTTC	1 cut(s)	1175
XspI	CTAG	3 cut(s)	135, 467, 690
ZrmI	AGTACT	2 cut(s)	386, 746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.