pycom16g10470

Protein of unknown function (DUF1664)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0004665
Physical Location & Seq
Reverse (-)
7130356 .. 7137244
6889 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 993 bp
ATGGCTGCTCTCCCTCTAGGCAAGCTCACCATTCTCGTCGGCGCAGGCATTCTTGGTTCAGTTCTTGCAAAAGAAGGACGTGTATCTGATGTTGTCTCTGGTGCTTTCAAGATTGCTTGGAAACAAATTAGACGAAGTGATAATACTTCGGCGGTTAATAAACCACACAACGACTCTCTGATGGCTCAGATGAACAACCTACGGAAGGAGCTGGAGATAATAGCATCAAGTCGACCACCAGTTACAGTTATAACTATGAGTCGAACAGGTACTAGCAAATATGGTATAATTATTGTTGTAGTAGCCGCAGGATATGGCTACTTTTGGTGGAAGGGGTGGAAGCTTCCTGACATGATGTTTGCAACAAGACGTAGCTTGTCTGATGCTTCCAATTCTACCACTCAGAGGAAATTGTCTTCACAACTTGACAATGTGGAATGTAGTTTGGATGAAAGTATAGAAAATACGGCAAAGACACAACAGGAGGTTGTTCAACTACAAGGAAGGACGGATACCATTAGCAGAGATTTTAAAAAAGTTCACCACGCAGTGCTGACTCTGGAAACAAAAATTAATAGAATTGAAGGGAAGCAGGGTGAGATTACCGGTGGAGTATGGAAGTTATGTGACTACGCCCTGAACATGGAAAAGGGCATAAATGCAGAACGCATTCAGGCATCACCATCCAGTTTTTCCAGGCCAGTTCTTGAACTACCACCAGCCTCCCCCTCATCTTTGGTGACCCCACCGAAGTCCTCGAGGCCAGCGCTTGAGCTACCCCCAGCATCACCCTCAAGGGGGAATGGTGGAATCTTGGAAGTGGTTGAGTCCTCAAATCGTGGCGAGGCTTCCAGTGAGCTTCGTGCTCCAGAAGGCACAAACAATGCGTCTTCCAGTTCTGGTTGGTTCGGGTTTGGGTTTCCAACTTTTAATAGTTCGGCTCTCCTGAGGACGCGAAGTGCTACAACTGGAATGGTTCAACGGAAACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1664

Protein Analysis

331

Amino Acids

35.75

Weight (kDa)

9.82

Isoelectric Point (pI)

54.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1664 PF07889 91 - 198 3.3e-27 Protein of unknown function (DUF1664)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 251
AbsI CCTCGAGG 1 cut(s) 757
AccI GTMKAC 1 cut(s) 232
AccII CGCG 1 cut(s) 955
AciI CCGC 2 cut(s) 152, 306
AdeI CACNNNGTG 1 cut(s) 550
AfaI GTAC 1 cut(s) 271
AfeI AGCGCT 1 cut(s) 768
AfiI CCNNNNNNNGG 5 cut(s) 205, 405, 643, 797, 798
AflIII ACRYGT 1 cut(s) 79
AgeI ACCGGT 1 cut(s) 605
AgsI TTSAA 5 cut(s) 109, 494, 584, 710, 980
AjiI CACGTC 1 cut(s) 80
AjnI CCWGG 1 cut(s) 695
AluBI AGCT 6 cut(s) 25, 211, 343, 375, 775, 859
AluI AGCT 6 cut(s) 25, 211, 343, 375, 775, 859
Alw21I GWGCWC 1 cut(s) 868
Alw26I GTCTC 1 cut(s) 100
Ama87I CYCGRG 1 cut(s) 757
Aor51HI AGCGCT 1 cut(s) 768
AoxI GGCC 2 cut(s) 698, 761
ApeKI GCWGC 1 cut(s) 5
ArsI GACNNNNNNTTYG 4 cut(s) 341, 373, 872, 904
AseI ATTAAT 1 cut(s) 573
AsiGI ACCGGT 1 cut(s) 605
Asp700I GAANNNNTTC 1 cut(s) 669
AspLEI GCGC 2 cut(s) 44, 769
AsuHPI GGTGA 6 cut(s) 19, 533, 608, 672, 751, 780
AvaI CYCGRG 1 cut(s) 757
AxyI CCTNAGG 1 cut(s) 947
BarI GAAGNNNNNNTAC 4 cut(s) 127, 159, 496, 528
BbsI GAAGAC 2 cut(s) 408, 882
Bbv12I GWGCWC 1 cut(s) 868
BccI CCATC 2 cut(s) 175, 691
BceAI ACGGC 1 cut(s) 483
BciT130I CCWGG 1 cut(s) 697
BciVI GTATCC 1 cut(s) 505
BcoDI GTCTC 1 cut(s) 100
BfaI CTAG 2 cut(s) 17, 273
BfoI RGCGCY 1 cut(s) 770
BfuI GTATCC 1 cut(s) 505
BisI GCNGC 2 cut(s) 6, 306
BlsI GCNGC 2 cut(s) 7, 307
Bme1390I CCNGG 1 cut(s) 697
BmeT110I CYCGRG 1 cut(s) 757
BmgBI CACGTC 1 cut(s) 80
BmrFI CCNGG 1 cut(s) 697
BmsI GCATC 4 cut(s) 233, 373, 686, 794
BpiI GAAGAC 2 cut(s) 408, 882
BpmI CTGGAG 2 cut(s) 233, 852
BpuEI CTTGAG 2 cut(s) 778, 791
BsaWI WCCGGW 1 cut(s) 605
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 405, 643, 797, 798
Bse118I RCCGGY 1 cut(s) 605
Bse1I ACTGG 6 cut(s) 239, 687, 701, 852, 894, 973
Bse21I CCTNAGG 1 cut(s) 947
BseBI CCWGG 1 cut(s) 697
BseGI GGATG 2 cut(s) 454, 683
BseLI CCNNNNNNNGG 5 cut(s) 205, 405, 643, 797, 798
BseMII CTCAG 3 cut(s) 200, 416, 938
BseNI ACTGG 6 cut(s) 239, 687, 701, 852, 894, 973
BseYI CCCAGC 1 cut(s) 781
Bsh1236I CGCG 1 cut(s) 955
BshFI GGCC 2 cut(s) 700, 763
BshTI ACCGGT 1 cut(s) 605
BsiHKAI GWGCWC 1 cut(s) 868
BsiHKCI CYCGRG 1 cut(s) 757
BsiSI CCGG 1 cut(s) 606
BslI CCNNNNNNNGG 5 cut(s) 205, 405, 643, 797, 798
BsmAI GTCTC 1 cut(s) 100
BsmI GAATGC 2 cut(s) 48, 669
BsnI GGCC 2 cut(s) 700, 763
BsoBI CYCGRG 1 cut(s) 757
Bsp1286I GDGCHC 1 cut(s) 868
BspACI CCGC 2 cut(s) 152, 306
BspANI GGCC 2 cut(s) 700, 763
BspCNI CTCAG 3 cut(s) 199, 415, 939
BspFNI CGCG 1 cut(s) 955
BsrFI RCCGGY 1 cut(s) 605
BsrI ACTGG 6 cut(s) 239, 687, 701, 852, 894, 973
BssAI RCCGGY 1 cut(s) 605
Bst2UI CCWGG 1 cut(s) 697
Bst4CI ACNGT 1 cut(s) 247
BstC8I GCNNGC 3 cut(s) 23, 46, 765
BstDEI CTNAG 3 cut(s) 186, 402, 947
BstEII GGTNACC 1 cut(s) 739
BstENI CCTNNNNNAGG 1 cut(s) 203
BstF5I GGATG 2 cut(s) 454, 683
BstFNI CGCG 1 cut(s) 955
BstH2I RGCGCY 1 cut(s) 770
BstHHI GCGC 2 cut(s) 44, 769
BstMAI GTCTC 1 cut(s) 100
BstNI CCWGG 1 cut(s) 697
BstPI GGTNACC 1 cut(s) 739
BstSCI CCNGG 1 cut(s) 695
BstUI CGCG 1 cut(s) 955
BstV2I GAAGAC 2 cut(s) 408, 882
Bsu36I CCTNAGG 1 cut(s) 947
BsuI GTATCC 1 cut(s) 505
BsuRI GGCC 2 cut(s) 700, 763
BtrI CACGTC 1 cut(s) 80
BtsCI GGATG 2 cut(s) 454, 683
BtsI GCAGTG 1 cut(s) 555
BtsIMutI CAGTG 2 cut(s) 555, 859
Cac8I GCNNGC 3 cut(s) 23, 46, 765
CfoI GCGC 2 cut(s) 44, 769
Cfr10I RCCGGY 1 cut(s) 605
CseI GACGC 2 cut(s) 876, 961
Csp6I GTAC 1 cut(s) 270
CspAI ACCGGT 1 cut(s) 605
CviAII CATG 2 cut(s) 352, 643
CviQI GTAC 1 cut(s) 270
DdeI CTNAG 3 cut(s) 186, 402, 947
DraI TTTAAA 1 cut(s) 532
DraIII CACNNNGTG 1 cut(s) 550
Eco47III AGCGCT 1 cut(s) 768
Eco81I CCTNAGG 1 cut(s) 947
Eco88I CYCGRG 1 cut(s) 757
Eco91I GGTNACC 1 cut(s) 739
EcoNI CCTNNNNNAGG 1 cut(s) 203
EcoO65I GGTNACC 1 cut(s) 739
EcoRII CCWGG 1 cut(s) 695
FaeI CATG 2 cut(s) 355, 646
FatI CATG 2 cut(s) 351, 642
FblI GTMKAC 1 cut(s) 232
Fnu4HI GCNGC 2 cut(s) 6, 306
FokI GGATG 2 cut(s) 461, 670
Fsp4HI GCNGC 2 cut(s) 6, 306
FspBI CTAG 2 cut(s) 17, 273
GlaI GCGC 2 cut(s) 43, 768
GluI GCNGC 2 cut(s) 6, 306
GsaI CCCAGC 1 cut(s) 785
GsuI CTGGAG 2 cut(s) 233, 852
HaeII RGCGCY 1 cut(s) 770
HaeIII GGCC 2 cut(s) 700, 763
HapII CCGG 1 cut(s) 606
HgaI GACGC 2 cut(s) 876, 961
HhaI GCGC 2 cut(s) 44, 769
Hin1II CATG 2 cut(s) 355, 646
Hin6I GCGC 2 cut(s) 42, 767
HinP1I GCGC 2 cut(s) 42, 767
HincII GTYRAC 1 cut(s) 233
HindII GTYRAC 1 cut(s) 233
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 5 cut(s) 173, 259, 556, 810, 827
HpaII CCGG 1 cut(s) 606
HphI GGTGA 6 cut(s) 19, 533, 608, 672, 751, 780
Hpy166II GTNNAC 2 cut(s) 233, 541
Hpy188I TCNGA 5 cut(s) 88, 180, 189, 382, 405
Hpy188III TCNNGA 6 cut(s) 109, 347, 560, 707, 869, 946
Hpy8I GTNNAC 2 cut(s) 233, 541
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 6 cut(s) 68, 199, 325, 498, 578, 866
HpyCH4III ACNGT 1 cut(s) 247
HpyCH4IV ACGT 2 cut(s) 79, 370
HpyCH4V TGCA 3 cut(s) 68, 362, 662
HpyF3I CTNAG 3 cut(s) 186, 402, 947
HpySE526I ACGT 2 cut(s) 79, 370
Hsp92II CATG 2 cut(s) 355, 646
HspAI GCGC 2 cut(s) 42, 767
LmnI GCTCC 2 cut(s) 208, 871
LweI GCATC 4 cut(s) 233, 373, 686, 794
MaeI CTAG 2 cut(s) 17, 273
MaeII ACGT 2 cut(s) 79, 370
MaeIII GTNAC 3 cut(s) 241, 626, 739
MboII GAAGA 2 cut(s) 408, 882
MhlI GDGCHC 1 cut(s) 868
MluCI AATT 6 cut(s) 126, 288, 391, 410, 570, 579
MlyI GAGTC 4 cut(s) 167, 268, 550, 836
MmeI TCCRAC 1 cut(s) 947
MroXI GAANNNNTTC 1 cut(s) 669
MseI TTAA 4 cut(s) 156, 531, 573, 930
MspI CCGG 1 cut(s) 606
MspR9I CCNGG 1 cut(s) 697
Mva1269I GAATGC 2 cut(s) 48, 669
MvaI CCWGG 1 cut(s) 697
MvnI CGCG 1 cut(s) 955
NlaIII CATG 2 cut(s) 355, 646
NmuCI GTSAC 2 cut(s) 626, 739
PaeR7I CTCGAG 1 cut(s) 757
PctI GAATGC 2 cut(s) 48, 669
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 1 cut(s) 810
PinAI ACCGGT 1 cut(s) 605
PkrI GCNGC 2 cut(s) 7, 307
PleI GAGTC 4 cut(s) 167, 267, 550, 835
PpsI GAGTC 4 cut(s) 167, 267, 550, 835
PshBI ATTAAT 1 cut(s) 573
PsiI TTATAA 1 cut(s) 251
Psp6I CCWGG 1 cut(s) 695
PspEI GGTNACC 1 cut(s) 739
PspFI CCCAGC 1 cut(s) 781
PspGI CCWGG 1 cut(s) 695
PspXI VCTCGAGB 1 cut(s) 757
RsaI GTAC 1 cut(s) 271
RsaNI GTAC 1 cut(s) 270
SalI GTCGAC 1 cut(s) 231
SaqAI TTAA 4 cut(s) 156, 531, 573, 930
SatI GCNGC 2 cut(s) 6, 306
SchI GAGTC 4 cut(s) 167, 268, 550, 836
ScrFI CCNGG 1 cut(s) 697
SduI GDGCHC 1 cut(s) 868
SfaNI GCATC 4 cut(s) 233, 373, 686, 794
Sfr274I CTCGAG 1 cut(s) 757
SlaI CTCGAG 1 cut(s) 757
SmlI CTYRAG 3 cut(s) 757, 770, 793
SmoI CTYRAG 3 cut(s) 757, 770, 793
Sse9I AATT 6 cut(s) 126, 288, 391, 410, 570, 579
SsiI CCGC 2 cut(s) 152, 306
SspMI CTAG 2 cut(s) 17, 273
StyD4I CCNGG 1 cut(s) 695
TaaI ACNGT 1 cut(s) 247
TaiI ACGT 2 cut(s) 82, 373
TaqI TCGA 3 cut(s) 232, 262, 758
TasI AATT 6 cut(s) 126, 288, 391, 410, 570, 579
TauI GCSGC 1 cut(s) 308
TfiI GAWTC 1 cut(s) 810
Tru1I TTAA 4 cut(s) 156, 531, 573, 930
Tru9I TTAA 4 cut(s) 156, 531, 573, 930
TscAI CASTG 2 cut(s) 555, 859
TseFI GTSAC 2 cut(s) 626, 739
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 2 cut(s) 626, 739
TspDTI ATGAA 2 cut(s) 206, 465
TspGWI ACGGA 2 cut(s) 217, 524
TspRI CASTG 2 cut(s) 555, 859
VspI ATTAAT 1 cut(s) 573
XagI CCTNNNNNAGG 1 cut(s) 203
XhoI CTCGAG 1 cut(s) 757
XmiI GTMKAC 1 cut(s) 232
XmnI GAANNNNTTC 1 cut(s) 669
XspI CTAG 2 cut(s) 17, 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.