pycom16g13450

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0009360
Physical Location & Seq
Reverse (-)
9643864 .. 9646480
2617 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1182 bp
ATGTCCGGCGTTTCGATTGCTCGGATTCGGGGAGAGAATCGGTTCTACAACCCGCCAGCCGTACGACAACGGCAGCAGCAGCAGCAACAAAAGCTACAGGCAGTGAAGCATCAGAGGCAGTCGGTGGACTCAGACGACTGTGCGACTTCATACAGTTCTGGTTCAGGTCGGGAAGTGGTGAGCGATGCTACGAATTTGGATCGGTTTTTGGAGTACACCACACCTGTGGTTGTGGCCCAGTATTTTCCGAAGACAAGTGTGAAGGGATGGAGGACTCGTGAGTCAGAATTACATCCGTACTTTGTGCTTGGAGATTTATGGGAATCTTTCAAGGAGTGGAGCGCTTACGGTGCGGGTGTTCCTCTTGTGTTGAATGGGAGTGACTCTGTTATCCAGTACTATGTTCCTTACTTGTCCGCTATTCAGCTCTATGTTGACCCATCAAAGCCCTCAACGAGAATAAGGAGGCCTGGTGATGAGAGTGATGCAGAGTCATCGAGGGAGACAAGTAGCAACGGCAGCAGTGATTATGGAACAGAAAGAGGATTTAACAATGTTCCTTATAGTGCTTTAAGTTGGCAGAATGCTGCAGATGTAAATGGCCATGGTTGGAATAAAACCTTCCTGAGAAATAAACCCTTAAATGGTTCCTCAAGTGATGAAAGTGGTGAGGCTTGCAACCCTGGTCAGCTTATATTTCAATATATGGAGCATGATCAACCATTTGGTCGTGAACCTTTGGCTGATAAGATTTCAGTTCTTGCATCTCAATTTCCAGAGCTGAGGACATACAGGAGCTGTGATTTATCACCTTCTAGTTGGCTTTCTGTAGCCTGGTATCCGATATATAGGATACCTACAGGTCCAACATTGCAGAGCCTAGATGCATGCTTCTTGACCTTTCATTCCCTATCGACTCCCACAAGGGGTGCAAGCGCTGATAGACTTCAGTGTGGTGGTGCACGATCTAGAGACAATCAAAATGCCGATTTCAAACTATCATTGCAAATCTTTGGGCTTGCTTCGTACAAGTTCAAGGTTTCCTTTTGGAATCCTAATGGAGTTTACGAATGCCAGAAGGCTGATTCTCTATTGCAAGCGGCTGACAATTGGCTCAGGCGATTGCAAGTTAATCATCCTGATTTCAATTTCTTTGTGTCGCACAGCATTCCAAAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

394

Amino Acids

44.23

Weight (kDa)

7.62

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 64 - 385 8.3e-107 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 280
AciI CCGC 4 cut(s) 53, 353, 417, 1100
AclWI GGATC 1 cut(s) 207
AcoI YGGCCR 1 cut(s) 601
AcsI RAATTY 1 cut(s) 193
AcuI CTGAAG 1 cut(s) 932
AfaI GTAC 5 cut(s) 63, 215, 299, 398, 1028
AfeI AGCGCT 2 cut(s) 343, 937
AfiI CCNNNNNNNGG 2 cut(s) 644, 926
AgsI TTSAA 6 cut(s) 331, 373, 701, 994, 1036, 1147
AjnI CCWGG 3 cut(s) 469, 682, 833
AleI CACNNNNGTG 1 cut(s) 224
AluBI AGCT 5 cut(s) 94, 427, 691, 781, 798
AluI AGCT 5 cut(s) 94, 427, 691, 781, 798
Alw21I GWGCWC 1 cut(s) 964
Alw26I GTCTC 2 cut(s) 497, 966
Alw44I GTGCAC 1 cut(s) 960
AlwI GGATC 1 cut(s) 207
AlwNI CAGNNNCTG 1 cut(s) 798
Aor51HI AGCGCT 2 cut(s) 343, 937
AoxI GGCC 3 cut(s) 234, 467, 601
ApaLI GTGCAC 1 cut(s) 960
ApeKI GCWGC 6 cut(s) 73, 76, 79, 82, 519, 587
ApoI RAATTY 1 cut(s) 193
Asp700I GAANNNNTTC 1 cut(s) 41
AspLEI GCGC 2 cut(s) 344, 938
AspS9I GGNCC 2 cut(s) 235, 863
AsuHPI GGTGA 4 cut(s) 190, 485, 680, 801
AvaII GGWCC 1 cut(s) 863
BaeGI GKGCMC 1 cut(s) 964
BalI TGGCCA 1 cut(s) 603
BauI CACGAG 1 cut(s) 276
BbsI GAAGAC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 964
BbvCI CCTCAGC 1 cut(s) 782
BbvI GCAGC 6 cut(s) 85, 88, 91, 94, 531, 574
BccI CCATC 2 cut(s) 261, 448
BceAI ACGGC 3 cut(s) 44, 86, 532
BcgI CGANNNNNNTGC 2 cut(s) 477, 511
BciT130I CCWGG 3 cut(s) 471, 684, 835
BciVI GTATCC 2 cut(s) 846, 849
BclI TGATCA 1 cut(s) 715
BcoDI GTCTC 2 cut(s) 497, 966
BfaI CTAG 3 cut(s) 816, 881, 969
BfmI CTRYAG 4 cut(s) 95, 588, 828, 858
BfoI RGCGCY 2 cut(s) 345, 939
BfuI GTATCC 2 cut(s) 846, 849
BisI GCNGC 7 cut(s) 74, 77, 80, 83, 520, 588, 1101
BlsI GCNGC 7 cut(s) 75, 78, 81, 84, 521, 589, 1102
BmcAI AGTACT 1 cut(s) 398
Bme1390I CCNGG 3 cut(s) 471, 684, 835
Bme18I GGWCC 1 cut(s) 863
BmgT120I GGNCC 2 cut(s) 235, 863
BmiI GGNNCC 1 cut(s) 649
BmrFI CCNGG 3 cut(s) 471, 684, 835
BmrI ACTGGG 1 cut(s) 232
BmsI GCATC 5 cut(s) 118, 175, 475, 773, 874
BmuI ACTGGG 1 cut(s) 232
BpiI GAAGAC 1 cut(s) 257
Bpu10I CCTNAGC 2 cut(s) 782, 1115
BpuEI CTTGAG 1 cut(s) 637
BsaJI CCNNGG 2 cut(s) 604, 682
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 457, 487
Bsc4I CCNNNNNNNGG 2 cut(s) 644, 926
Bse1I ACTGG 2 cut(s) 238, 394
Bse3DI GCAATG 2 cut(s) 869, 1001
BseBI CCWGG 3 cut(s) 471, 684, 835
BseDI CCNNGG 2 cut(s) 604, 682
BseGI GGATG 3 cut(s) 272, 292, 1135
BseLI CCNNNNNNNGG 2 cut(s) 644, 926
BseMI GCAATG 2 cut(s) 869, 1001
BseMII CTCAG 4 cut(s) 144, 617, 773, 1129
BseNI ACTGG 2 cut(s) 238, 394
BseSI GKGCMC 1 cut(s) 964
BseXI GCAGC 6 cut(s) 85, 88, 91, 94, 531, 574
BshFI GGCC 3 cut(s) 236, 469, 603
BsiHKAI GWGCWC 1 cut(s) 964
BsiSI CCGG 1 cut(s) 6
BsiWI CGTACG 1 cut(s) 61
BslI CCNNNNNNNGG 2 cut(s) 644, 926
BsmAI GTCTC 2 cut(s) 497, 966
BsmI GAATGC 3 cut(s) 589, 1076, 1167
BsnI GGCC 3 cut(s) 236, 469, 603
Bsp1286I GDGCHC 1 cut(s) 964
Bsp143I GATC 3 cut(s) 199, 715, 965
Bsp19I CCATGG 1 cut(s) 604
BspACI CCGC 4 cut(s) 53, 353, 417, 1100
BspANI GGCC 3 cut(s) 236, 469, 603
BspCNI CTCAG 4 cut(s) 143, 618, 774, 1128
BspLI GGNNCC 1 cut(s) 649
BspMAI CTGCAG 1 cut(s) 592
BspPI GGATC 1 cut(s) 207
BsrDI GCAATG 2 cut(s) 869, 1001
BsrI ACTGG 2 cut(s) 238, 394
BssECI CCNNGG 2 cut(s) 604, 682
BssMI GATC 3 cut(s) 199, 715, 965
BssSI CACGAG 1 cut(s) 276
BssT1I CCWWGG 1 cut(s) 604
Bst2BI CACGAG 1 cut(s) 276
Bst2UI CCWGG 3 cut(s) 471, 684, 835
Bst4CI ACNGT 3 cut(s) 140, 155, 350
BstC8I GCNNGC 6 cut(s) 57, 676, 889, 934, 1020, 1098
BstDEI CTNAG 4 cut(s) 130, 626, 782, 1115
BstDSI CCRYGG 1 cut(s) 604
BstF5I GGATG 3 cut(s) 272, 292, 1135
BstH2I RGCGCY 2 cut(s) 345, 939
BstHHI GCGC 2 cut(s) 344, 938
BstKTI GATC 3 cut(s) 202, 718, 968
BstMAI GTCTC 2 cut(s) 497, 966
BstMBI GATC 3 cut(s) 199, 715, 965
BstMWI GCNNNNNNNGC 6 cut(s) 79, 82, 91, 115, 350, 519
BstNI CCWGG 3 cut(s) 471, 684, 835
BstNSI RCATGY 1 cut(s) 891
BstSCI CCNGG 3 cut(s) 469, 682, 833
BstSFI CTRYAG 4 cut(s) 95, 588, 828, 858
BstSLI GKGCMC 1 cut(s) 964
BstV1I GCAGC 6 cut(s) 85, 88, 91, 94, 531, 574
BstV2I GAAGAC 1 cut(s) 257
BstXI CCANNNNNNTGG 1 cut(s) 226
BsuI GTATCC 2 cut(s) 846, 849
BsuRI GGCC 3 cut(s) 236, 469, 603
BtgI CCRYGG 1 cut(s) 604
BtgZI GCGATG 1 cut(s) 198
BtsCI GGATG 3 cut(s) 272, 292, 1135
BtsI GCAGTG 2 cut(s) 108, 529
BtsIMutI CAGTG 3 cut(s) 108, 529, 956
Cac8I GCNNGC 6 cut(s) 57, 676, 889, 934, 1020, 1098
CaiI CAGNNNCTG 1 cut(s) 798
CfoI GCGC 2 cut(s) 344, 938
Cfr13I GGNCC 2 cut(s) 235, 863
Csp6I GTAC 5 cut(s) 62, 214, 298, 397, 1027
CviAII CATG 3 cut(s) 605, 713, 888
CviQI GTAC 5 cut(s) 62, 214, 298, 397, 1027
DdeI CTNAG 4 cut(s) 130, 626, 782, 1115
DpnI GATC 3 cut(s) 201, 717, 967
DpnII GATC 3 cut(s) 199, 715, 965
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 601
Eco130I CCWWGG 1 cut(s) 604
Eco147I AGGCCT 1 cut(s) 469
Eco47I GGWCC 1 cut(s) 863
Eco47III AGCGCT 2 cut(s) 343, 937
Eco57I CTGAAG 1 cut(s) 932
EcoRII CCWGG 3 cut(s) 469, 682, 833
EcoT14I CCWWGG 1 cut(s) 604
EcoT22I ATGCAT 1 cut(s) 889
ErhI CCWWGG 1 cut(s) 604
FaeI CATG 3 cut(s) 608, 716, 891
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FatI CATG 3 cut(s) 604, 712, 887
FauI CCCGC 2 cut(s) 60, 346
FbaI TGATCA 1 cut(s) 715
Fnu4HI GCNGC 7 cut(s) 74, 77, 80, 83, 520, 588, 1101
FokI GGATG 3 cut(s) 279, 279, 1122
Fsp4HI GCNGC 7 cut(s) 74, 77, 80, 83, 520, 588, 1101
FspBI CTAG 3 cut(s) 816, 881, 969
GlaI GCGC 2 cut(s) 343, 937
GluI GCNGC 7 cut(s) 74, 77, 80, 83, 520, 588, 1101
HaeII RGCGCY 2 cut(s) 345, 939
HaeIII GGCC 3 cut(s) 236, 469, 603
HapII CCGG 1 cut(s) 6
HhaI GCGC 2 cut(s) 344, 938
Hin1II CATG 3 cut(s) 608, 716, 891
Hin6I GCGC 2 cut(s) 342, 936
HinP1I GCGC 2 cut(s) 342, 936
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HpaII CCGG 1 cut(s) 6
HphI GGTGA 4 cut(s) 190, 485, 680, 801
Hpy166II GTNNAC 6 cut(s) 127, 216, 436, 734, 962, 1066
Hpy188I TCNGA 6 cut(s) 24, 114, 133, 249, 286, 843
Hpy188III TCNNGA 8 cut(s) 170, 278, 625, 731, 776, 895, 969, 1139
Hpy8I GTNNAC 6 cut(s) 127, 216, 436, 734, 962, 1066
HpyAV CCTTC 4 cut(s) 256, 631, 822, 1072
HpyCH4III ACNGT 3 cut(s) 140, 155, 350
HpyF10VI GCNNNNNNNGC 6 cut(s) 79, 82, 91, 115, 350, 519
HpyF3I CTNAG 4 cut(s) 130, 626, 782, 1115
Hsp92II CATG 3 cut(s) 608, 716, 891
HspAI GCGC 2 cut(s) 342, 936
Ksp22I TGATCA 1 cut(s) 715
Kzo9I GATC 3 cut(s) 199, 715, 965
LmnI GCTCC 3 cut(s) 339, 709, 795
Lsp1109I GCAGC 6 cut(s) 85, 88, 91, 94, 531, 574
LweI GCATC 5 cut(s) 118, 175, 475, 773, 874
MaeI CTAG 3 cut(s) 816, 881, 969
MaeIII GTNAC 1 cut(s) 380
MalI GATC 3 cut(s) 201, 717, 967
MboI GATC 3 cut(s) 199, 715, 965
MboII GAAGA 1 cut(s) 262
MfeI CAATTG 1 cut(s) 1108
MhlI GDGCHC 1 cut(s) 964
MlsI TGGCCA 1 cut(s) 603
MluCI AATT 5 cut(s) 193, 287, 770, 1108, 1147
MluNI TGGCCA 1 cut(s) 603
MlyI GAGTC 6 cut(s) 122, 268, 290, 377, 500, 910
MmeI TCCRAC 2 cut(s) 590, 890
Mox20I TGGCCA 1 cut(s) 603
Mph1103I ATGCAT 1 cut(s) 889
MroXI GAANNNNTTC 1 cut(s) 41
MscI TGGCCA 1 cut(s) 603
MseI TTAA 4 cut(s) 549, 572, 641, 1131
MslI CAYNNNNRTG 1 cut(s) 224
Msp20I TGGCCA 1 cut(s) 603
MspI CCGG 1 cut(s) 6
MspR9I CCNGG 3 cut(s) 471, 684, 835
MunI CAATTG 1 cut(s) 1108
Mva1269I GAATGC 3 cut(s) 589, 1076, 1167
MvaI CCWGG 3 cut(s) 471, 684, 835
MwoI GCNNNNNNNGC 6 cut(s) 79, 82, 91, 115, 350, 519
NcoI CCATGG 1 cut(s) 604
NdeII GATC 3 cut(s) 199, 715, 965
NlaIII CATG 3 cut(s) 608, 716, 891
NlaIV GGNNCC 1 cut(s) 649
NmuCI GTSAC 1 cut(s) 380
NsiI ATGCAT 1 cut(s) 889
NspI RCATGY 1 cut(s) 891
OliI CACNNNNGTG 1 cut(s) 224
PaeI GCATGC 1 cut(s) 891
PceI AGGCCT 1 cut(s) 469
PctI GAATGC 3 cut(s) 589, 1076, 1167
PdmI GAANNNNTTC 1 cut(s) 41
PfeI GAWTC 5 cut(s) 25, 37, 323, 1051, 1085
Pfl23II CGTACG 1 cut(s) 61
PkrI GCNGC 7 cut(s) 75, 78, 81, 84, 521, 589, 1102
PleI GAGTC 6 cut(s) 122, 268, 289, 377, 499, 910
PpsI GAGTC 6 cut(s) 122, 268, 289, 377, 499, 910
Psp6I CCWGG 3 cut(s) 469, 682, 833
PspGI CCWGG 3 cut(s) 469, 682, 833
PspLI CGTACG 1 cut(s) 61
PspN4I GGNNCC 1 cut(s) 649
PspPI GGNCC 2 cut(s) 235, 863
PstI CTGCAG 1 cut(s) 592
PstNI CAGNNNCTG 1 cut(s) 798
RsaI GTAC 5 cut(s) 63, 215, 299, 398, 1028
RsaNI GTAC 5 cut(s) 62, 214, 298, 397, 1027
RseI CAYNNNNRTG 1 cut(s) 224
SaqAI TTAA 4 cut(s) 549, 572, 641, 1131
SatI GCNGC 7 cut(s) 74, 77, 80, 83, 520, 588, 1101
Sau3AI GATC 3 cut(s) 199, 715, 965
Sau96I GGNCC 2 cut(s) 235, 863
ScaI AGTACT 1 cut(s) 398
SchI GAGTC 6 cut(s) 122, 268, 290, 377, 500, 910
ScrFI CCNGG 3 cut(s) 471, 684, 835
SduI GDGCHC 1 cut(s) 964
SfaNI GCATC 5 cut(s) 118, 175, 475, 773, 874
SfcI CTRYAG 4 cut(s) 95, 588, 828, 858
SinI GGWCC 1 cut(s) 863
SmiMI CAYNNNNRTG 1 cut(s) 224
SmlI CTYRAG 1 cut(s) 652
SmoI CTYRAG 1 cut(s) 652
SphI GCATGC 1 cut(s) 891
Sse9I AATT 5 cut(s) 193, 287, 770, 1108, 1147
SseBI AGGCCT 1 cut(s) 469
SsiI CCGC 4 cut(s) 53, 353, 417, 1100
SspMI CTAG 3 cut(s) 816, 881, 969
StuI AGGCCT 1 cut(s) 469
StyD4I CCNGG 3 cut(s) 469, 682, 833
StyI CCWWGG 1 cut(s) 604
TaaI ACNGT 3 cut(s) 140, 155, 350
TaqI TCGA 3 cut(s) 14, 497, 914
TasI AATT 5 cut(s) 193, 287, 770, 1108, 1147
TatI WGTACW 2 cut(s) 213, 396
TauI GCSGC 1 cut(s) 1103
TfiI GAWTC 5 cut(s) 25, 37, 323, 1051, 1085
Tru1I TTAA 4 cut(s) 549, 572, 641, 1131
Tru9I TTAA 4 cut(s) 549, 572, 641, 1131
TscAI CASTG 3 cut(s) 108, 529, 956
TseFI GTSAC 1 cut(s) 380
TseI GCWGC 6 cut(s) 73, 76, 79, 82, 519, 587
Tsp45I GTSAC 1 cut(s) 380
TspDTI ATGAA 3 cut(s) 138, 675, 893
TspGWI ACGGA 1 cut(s) 285
TspRI CASTG 3 cut(s) 108, 529, 956
VneI GTGCAC 1 cut(s) 960
VpaK11BI GGWCC 1 cut(s) 863
XapI RAATTY 1 cut(s) 193
XbaI TCTAGA 1 cut(s) 968
XceI RCATGY 1 cut(s) 891
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 3 cut(s) 816, 881, 969
ZrmI AGTACT 1 cut(s) 398
Zsp2I ATGCAT 1 cut(s) 889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.