pycom16g14090

Eukaryotic translation initiation factor 2 subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
10117509 .. 10122843
5335 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1125 bp
ATGGCTTACAAGGCATATGGAAGTGGAAAGGAAGATGCTCCTCTCTGTGATGTTCCTGGATTTGAGAACTGCAGGATGAAATTGTTGAGACATGTATCTTTTGTAGATTGCCCGGGTCACGATATTCTTATGGCTACTATGCTTAATGGTGCCGCAATTATGGATGGAGCATTACTTCTCATTGCTGCTAATGAAAGCTGTCCCCAACCACAAACTTCTGAGCATCTGGCTGCTGTTGAAATTATGCGTCTTCAACATATTATTATTCTTCAGAATAAAGTAGATCTCATTCAGGAGAATGTGGCCATTAACCAACATGAGGCAATCAGGAAGTTTATTCAGGGAACTGTAGCTGATAATGCACCAGTGGTGCCAATTTCTGCTCAGTTGAAGTATAATATTGACGTTGTGTGTGAATACATTGTAAAAAAGATCGCGATTCAAGAAAGGAACTTTATCTCACCTCCCAATATGATTGTTATCCGTTCTTTTGATGTCAATAAACCTGGGTACGAGGTTGATGAGATTAGAGGTGGAGTGGCTGGTGGAAGTATCCTCAGGGGTGTTTTGAAAGTCAACCAATTTATTGAGGTTCGTCCTGGGATTGTTGTTAAAGACGAGAGTGGAAATATCAAGTGCACGCCAATATATTCTAGAATTGTTTCATTGTATGCTGAGCAAAATGAGTTGCAATTTGCGGTGCCAGAAGGTCTTATTGGTGTTGGAACAACCATCGATCCCACTTTGACACGTGCTGATAGGTTAGTGGGTCAAGTTCTTGGTGAAGTTGGGTCACTCCCTGAAGTATTTGTTGAGCTTGAGGTCAACTTCTTCTTGTTGAGAAGGCTTCTGGGGGTCAGGACAAAGGGGTCTGAGAAGCAGGGAAAGGTCTCAAAGCTGGTCAAGGGCGAGATCCTCATGTTGAATATAGGATCCATGTCTACAGGGGCTAGGGTTCTTGCTGTAAGGAACGATTTGGCAAAGTTGCAACTCACGTCTCCAGTTTGCACGAGCAAAGGAGAGAAAATTGCGCTCAGTCGACGTGTTGAGAAGCATTGGCGTCTTATTGGCTGGGGTCAGATTCAAGCTGGAACAACCCTTGATGTCCCACCATGCCCAATTTGA

Protein Analysis

375

Amino Acids

40.92

Weight (kDa)

8.06

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 30 - 145 2.1e-19 Elongation factor Tu GTP binding domain
GTP_EFTU_D2 PF03144 178 - 260 4.8e-08 Elongation factor Tu domain 2
eIF2_C PF09173 272 - 361 1.4e-32 Initiation factor eIF2 gamma, C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 868
AccB1I GGYRCC 3 cut(s) 149, 370, 700
AccI GTMKAC 2 cut(s) 941, 1039
AccII CGCG 1 cut(s) 437
AciI CCGC 2 cut(s) 153, 698
AclWI GGATC 4 cut(s) 731, 907, 927, 940
AcoI YGGCCR 1 cut(s) 303
AcuI CTGAAG 2 cut(s) 254, 822
AcvI CACGTG 1 cut(s) 752
AcyI GRCGYC 1 cut(s) 1060
AfaI GTAC 1 cut(s) 512
AfiI CCNNNNNNNGG 1 cut(s) 319
AflIII ACRYGT 3 cut(s) 91, 749, 1042
AgsI TTSAA 7 cut(s) 239, 254, 391, 443, 571, 925, 1085
AjiI CACGTC 2 cut(s) 996, 1043
AjnI CCWGG 3 cut(s) 55, 505, 598
AjuI GAANNNNNNNTTGG 2 cut(s) 699, 731
AluBI AGCT 5 cut(s) 198, 353, 817, 898, 1088
AluI AGCT 5 cut(s) 198, 353, 817, 898, 1088
Alw21I GWGCWC 1 cut(s) 641
Alw26I GTCTC 3 cut(s) 82, 895, 1002
Alw44I GTGCAC 1 cut(s) 637
AlwI GGATC 4 cut(s) 731, 907, 927, 940
Ama87I CYCGRG 1 cut(s) 112
AoxI GGCC 1 cut(s) 303
ApaLI GTGCAC 1 cut(s) 637
ApeKI GCWGC 2 cut(s) 185, 230
Asp700I GAANNNNTTC 1 cut(s) 661
AspLEI GCGC 1 cut(s) 1033
AsuC2I CCSGG 2 cut(s) 113, 114
AsuHPI GGTGA 2 cut(s) 453, 794
AvaI CYCGRG 1 cut(s) 112
AxyI CCTNAGG 1 cut(s) 557
BaeGI GKGCMC 1 cut(s) 641
BalI TGGCCA 1 cut(s) 305
BamHI GGATCC 1 cut(s) 932
BanI GGYRCC 3 cut(s) 149, 370, 700
BauI CACGAG 1 cut(s) 1009
BbrPI CACGTG 1 cut(s) 752
BbsI GAAGAC 1 cut(s) 242
Bbv12I GWGCWC 1 cut(s) 641
BbvI GCAGC 2 cut(s) 172, 217
BccI CCATC 2 cut(s) 158, 740
BciT130I CCWGG 3 cut(s) 57, 507, 600
BciVI GTATCC 1 cut(s) 563
BcnI CCSGG 2 cut(s) 113, 114
BcoDI GTCTC 3 cut(s) 82, 895, 1002
BfaI CTAG 2 cut(s) 654, 951
BfmI CTRYAG 3 cut(s) 70, 348, 942
BfuI GTATCC 1 cut(s) 563
BglII AGATCT 1 cut(s) 283
BisI GCNGC 3 cut(s) 153, 186, 231
BlpI GCTNAGC 1 cut(s) 675
BlsI GCNGC 3 cut(s) 154, 187, 232
Bme1390I CCNGG 5 cut(s) 57, 113, 114, 507, 600
BmeT110I CYCGRG 1 cut(s) 112
BmgBI CACGTC 2 cut(s) 996, 1043
BmiI GGNNCC 4 cut(s) 151, 372, 702, 934
BmrFI CCNGG 5 cut(s) 57, 113, 114, 507, 600
BmsI GCATC 2 cut(s) 25, 232
BpiI GAAGAC 1 cut(s) 242
BpmI CTGGAG 1 cut(s) 984
Bpu1102I GCTNAGC 1 cut(s) 675
BpuEI CTTGAG 1 cut(s) 839
BpuMI CCSGG 2 cut(s) 113, 114
Bsa29I ATCGAT 1 cut(s) 735
BsaAI YACGTR 1 cut(s) 752
BsaBI GATNNNNATC 1 cut(s) 479
BsaHI GRCGYC 1 cut(s) 1060
BsaI GGTCTC 1 cut(s) 895
BsaJI CCNNGG 3 cut(s) 112, 506, 599
Bsc4I CCNNNNNNNGG 1 cut(s) 319
Bse1I ACTGG 2 cut(s) 365, 1001
Bse21I CCTNAGG 1 cut(s) 557
Bse3DI GCAATG 1 cut(s) 180
Bse8I GATNNNNATC 1 cut(s) 479
BseBI CCWGG 3 cut(s) 57, 507, 600
BseCI ATCGAT 1 cut(s) 735
BseDI CCNNGG 3 cut(s) 112, 506, 599
BseGI GGATG 2 cut(s) 81, 169
BseJI GATNNNNATC 1 cut(s) 479
BseLI CCNNNNNNNGG 1 cut(s) 319
BseMI GCAATG 1 cut(s) 180
BseMII CTCAG 6 cut(s) 210, 398, 571, 666, 864, 1048
BseNI ACTGG 2 cut(s) 365, 1001
BseRI GAGGAG 1 cut(s) 30
BseSI GKGCMC 1 cut(s) 641
BseXI GCAGC 2 cut(s) 172, 217
BseYI CCCAGC 1 cut(s) 1071
Bsh1236I CGCG 1 cut(s) 437
BshFI GGCC 1 cut(s) 305
BshNI GGYRCC 3 cut(s) 149, 370, 700
BshVI ATCGAT 1 cut(s) 735
BsiHKAI GWGCWC 1 cut(s) 641
BsiHKCI CYCGRG 1 cut(s) 112
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 2 cut(s) 186, 1091
BslI CCNNNNNNNGG 1 cut(s) 319
BsmAI GTCTC 3 cut(s) 82, 895, 1002
BsmBI CGTCTC 1 cut(s) 1002
BsmFI GGGAC 2 cut(s) 186, 1091
BsnI GGCC 1 cut(s) 305
Bso31I GGTCTC 1 cut(s) 895
BsoBI CYCGRG 1 cut(s) 112
Bsp1286I GDGCHC 1 cut(s) 641
Bsp143I GATC 5 cut(s) 283, 432, 736, 912, 932
Bsp1720I GCTNAGC 1 cut(s) 675
Bsp68I TCGCGA 1 cut(s) 437
BspACI CCGC 2 cut(s) 153, 698
BspANI GGCC 1 cut(s) 305
BspCNI CTCAG 6 cut(s) 211, 397, 570, 667, 865, 1047
BspDI ATCGAT 1 cut(s) 735
BspFNI CGCG 1 cut(s) 437
BspLI GGNNCC 4 cut(s) 151, 372, 702, 934
BspMAI CTGCAG 1 cut(s) 74
BspPI GGATC 4 cut(s) 731, 907, 927, 940
BspT107I GGYRCC 3 cut(s) 149, 370, 700
BspTNI GGTCTC 1 cut(s) 895
BsrDI GCAATG 1 cut(s) 180
BsrI ACTGG 2 cut(s) 365, 1001
BssECI CCNNGG 3 cut(s) 112, 506, 599
BssMI GATC 5 cut(s) 283, 432, 736, 912, 932
BssNI GRCGYC 1 cut(s) 1060
BssSI CACGAG 1 cut(s) 1009
Bst2BI CACGAG 1 cut(s) 1009
Bst2UI CCWGG 3 cut(s) 57, 507, 600
Bst4CI ACNGT 1 cut(s) 349
BstACI GRCGYC 1 cut(s) 1060
BstBAI YACGTR 1 cut(s) 752
BstC8I GCNNGC 1 cut(s) 641
BstDEI CTNAG 6 cut(s) 219, 384, 557, 675, 873, 1034
BstF5I GGATG 2 cut(s) 81, 169
BstFNI CGCG 1 cut(s) 437
BstHHI GCGC 1 cut(s) 1033
BstKTI GATC 5 cut(s) 286, 435, 739, 915, 935
BstMAI GTCTC 3 cut(s) 82, 895, 1002
BstMBI GATC 5 cut(s) 283, 432, 736, 912, 932
BstMWI GCNNNNNNNGC 2 cut(s) 11, 359
BstNI CCWGG 3 cut(s) 57, 507, 600
BstNSI RCATGY 1 cut(s) 95
BstSCI CCNGG 5 cut(s) 55, 111, 112, 505, 598
BstSFI CTRYAG 3 cut(s) 70, 348, 942
BstSLI GKGCMC 1 cut(s) 641
BstUI CGCG 1 cut(s) 437
BstV1I GCAGC 2 cut(s) 172, 217
BstV2I GAAGAC 1 cut(s) 242
BstX2I RGATCY 3 cut(s) 283, 912, 932
BstYI RGATCY 3 cut(s) 283, 912, 932
Bsu15I ATCGAT 1 cut(s) 735
Bsu36I CCTNAGG 1 cut(s) 557
BsuI GTATCC 1 cut(s) 563
BsuRI GGCC 1 cut(s) 305
BsuTUI ATCGAT 1 cut(s) 735
BtrI CACGTC 2 cut(s) 996, 1043
BtsCI GGATG 2 cut(s) 81, 169
BtsIMutI CAGTG 1 cut(s) 372
BtuMI TCGCGA 1 cut(s) 437
Cac8I GCNNGC 1 cut(s) 641
CfoI GCGC 1 cut(s) 1033
Cfr9I CCCGGG 1 cut(s) 112
ClaI ATCGAT 1 cut(s) 735
CseI GACGC 2 cut(s) 236, 1049
Csp6I GTAC 1 cut(s) 511
CviAII CATG 5 cut(s) 92, 317, 919, 937, 1113
CviQI GTAC 1 cut(s) 511
DdeI CTNAG 6 cut(s) 219, 384, 557, 675, 873, 1034
DpnI GATC 5 cut(s) 285, 434, 738, 914, 934
DpnII GATC 5 cut(s) 283, 432, 736, 912, 932
DrdI GACNNNNNNGTC 1 cut(s) 868
DseDI GACNNNNNNGTC 1 cut(s) 868
EaeI YGGCCR 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 895
Eco57I CTGAAG 2 cut(s) 254, 822
Eco72I CACGTG 1 cut(s) 752
Eco81I CCTNAGG 1 cut(s) 557
Eco88I CYCGRG 1 cut(s) 112
EcoRII CCWGG 3 cut(s) 55, 505, 598
Esp3I CGTCTC 1 cut(s) 1002
FaeI CATG 5 cut(s) 95, 320, 922, 940, 1116
FaqI GGGAC 2 cut(s) 186, 1091
FatI CATG 5 cut(s) 91, 316, 918, 936, 1112
FauNDI CATATG 1 cut(s) 16
FblI GTMKAC 2 cut(s) 941, 1039
Fnu4HI GCNGC 3 cut(s) 153, 186, 231
FokI GGATG 2 cut(s) 88, 176
Fsp4HI GCNGC 3 cut(s) 153, 186, 231
FspBI CTAG 2 cut(s) 654, 951
GlaI GCGC 1 cut(s) 1032
GluI GCNGC 3 cut(s) 153, 186, 231
GsaI CCCAGC 1 cut(s) 1075
GsuI CTGGAG 1 cut(s) 984
HaeIII GGCC 1 cut(s) 305
HapII CCGG 1 cut(s) 113
HgaI GACGC 2 cut(s) 236, 1049
HhaI GCGC 1 cut(s) 1033
Hin1I GRCGYC 1 cut(s) 1060
Hin1II CATG 5 cut(s) 95, 320, 922, 940, 1116
Hin6I GCGC 1 cut(s) 1031
HinP1I GCGC 1 cut(s) 1031
HincII GTYRAC 3 cut(s) 577, 826, 1040
HindII GTYRAC 3 cut(s) 577, 826, 1040
HinfI GANTC 2 cut(s) 439, 1081
HpaII CCGG 1 cut(s) 113
HphI GGTGA 2 cut(s) 453, 794
Hpy166II GTNNAC 5 cut(s) 577, 639, 826, 942, 1040
Hpy188I TCNGA 4 cut(s) 220, 273, 874, 1080
Hpy188III TCNNGA 7 cut(s) 119, 293, 328, 436, 443, 654, 859
Hpy8I GTNNAC 5 cut(s) 577, 639, 826, 942, 1040
Hpy99I CGWCG 1 cut(s) 1044
HpyAV CCTTC 2 cut(s) 701, 837
HpyCH4III ACNGT 1 cut(s) 349
HpyCH4IV ACGT 4 cut(s) 405, 751, 995, 1042
HpyCH4V TGCA 6 cut(s) 72, 362, 639, 691, 988, 1008
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 359
HpyF3I CTNAG 6 cut(s) 219, 384, 557, 675, 873, 1034
HpySE526I ACGT 4 cut(s) 405, 751, 995, 1042
Hsp92I GRCGYC 1 cut(s) 1060
Hsp92II CATG 5 cut(s) 95, 320, 922, 940, 1116
HspAI GCGC 1 cut(s) 1031
Kzo9I GATC 5 cut(s) 283, 432, 736, 912, 932
LmnI GCTCC 2 cut(s) 43, 167
Lsp1109I GCAGC 2 cut(s) 172, 217
LweI GCATC 2 cut(s) 25, 232
MaeI CTAG 2 cut(s) 654, 951
MaeII ACGT 4 cut(s) 405, 751, 995, 1042
MaeIII GTNAC 2 cut(s) 116, 792
MalI GATC 5 cut(s) 285, 434, 738, 914, 934
MboI GATC 5 cut(s) 283, 432, 736, 912, 932
MboII GAAGA 4 cut(s) 44, 242, 260, 823
MflI RGATCY 3 cut(s) 283, 912, 932
MhlI GDGCHC 1 cut(s) 641
MlsI TGGCCA 1 cut(s) 305
MluCI AATT 9 cut(s) 80, 156, 240, 375, 581, 657, 692, 1026, 1119
MluNI TGGCCA 1 cut(s) 305
MmeI TCCRAC 1 cut(s) 703
MnlI CCTC 9 cut(s) 51, 313, 474, 508, 524, 566, 583, 814, 926
Mox20I TGGCCA 1 cut(s) 305
MroXI GAANNNNTTC 1 cut(s) 661
MscI TGGCCA 1 cut(s) 305
MseI TTAA 3 cut(s) 144, 309, 612
Msp20I TGGCCA 1 cut(s) 305
MspI CCGG 1 cut(s) 113
MspR9I CCNGG 5 cut(s) 57, 113, 114, 507, 600
MvaI CCWGG 3 cut(s) 57, 507, 600
MvnI CGCG 1 cut(s) 437
MwoI GCNNNNNNNGC 2 cut(s) 11, 359
NciI CCSGG 2 cut(s) 113, 114
NdeI CATATG 1 cut(s) 16
NdeII GATC 5 cut(s) 283, 432, 736, 912, 932
NlaIII CATG 5 cut(s) 95, 320, 922, 940, 1116
NlaIV GGNNCC 4 cut(s) 151, 372, 702, 934
NmuCI GTSAC 2 cut(s) 116, 792
NruI TCGCGA 1 cut(s) 437
NspI RCATGY 1 cut(s) 95
PciI ACATGT 1 cut(s) 91
PdmI GAANNNNTTC 1 cut(s) 661
PfeI GAWTC 2 cut(s) 439, 1081
PfoI TCCNGGA 1 cut(s) 55
PkrI GCNGC 3 cut(s) 154, 187, 232
PmaCI CACGTG 1 cut(s) 752
PmlI CACGTG 1 cut(s) 752
Ppu21I YACGTR 1 cut(s) 752
PscI ACATGT 1 cut(s) 91
Psp6I CCWGG 3 cut(s) 55, 505, 598
PspCI CACGTG 1 cut(s) 752
PspFI CCCAGC 1 cut(s) 1071
PspGI CCWGG 3 cut(s) 55, 505, 598
PspN4I GGNNCC 4 cut(s) 151, 372, 702, 934
PstI CTGCAG 1 cut(s) 74
PsuI RGATCY 3 cut(s) 283, 912, 932
RruI TCGCGA 1 cut(s) 437
RsaI GTAC 1 cut(s) 512
RsaNI GTAC 1 cut(s) 511
SalI GTCGAC 1 cut(s) 1038
SaqAI TTAA 3 cut(s) 144, 309, 612
SatI GCNGC 3 cut(s) 153, 186, 231
Sau3AI GATC 5 cut(s) 283, 432, 736, 912, 932
ScrFI CCNGG 5 cut(s) 57, 113, 114, 507, 600
SduI GDGCHC 1 cut(s) 641
SfaNI GCATC 2 cut(s) 25, 232
SfcI CTRYAG 3 cut(s) 70, 348, 942
SmaI CCCGGG 1 cut(s) 114
SmlI CTYRAG 1 cut(s) 818
SmoI CTYRAG 1 cut(s) 818
Sse9I AATT 9 cut(s) 80, 156, 240, 375, 581, 657, 692, 1026, 1119
SsiI CCGC 2 cut(s) 153, 698
SspI AATATT 1 cut(s) 400
SspMI CTAG 2 cut(s) 654, 951
StyD4I CCNGG 5 cut(s) 55, 111, 112, 505, 598
TaaI ACNGT 1 cut(s) 349
TaiI ACGT 4 cut(s) 408, 754, 998, 1045
TaqI TCGA 2 cut(s) 735, 1039
TasI AATT 9 cut(s) 80, 156, 240, 375, 581, 657, 692, 1026, 1119
TauI GCSGC 1 cut(s) 155
TfiI GAWTC 2 cut(s) 439, 1081
Tru1I TTAA 3 cut(s) 144, 309, 612
Tru9I TTAA 3 cut(s) 144, 309, 612
TscAI CASTG 1 cut(s) 372
TseFI GTSAC 2 cut(s) 116, 792
TseI GCWGC 2 cut(s) 185, 230
Tsp45I GTSAC 2 cut(s) 116, 792
TspDTI ATGAA 3 cut(s) 92, 207, 654
TspGWI ACGGA 1 cut(s) 473
TspMI CCCGGG 1 cut(s) 112
TspRI CASTG 1 cut(s) 372
VneI GTGCAC 1 cut(s) 637
XbaI TCTAGA 1 cut(s) 653
XceI RCATGY 1 cut(s) 95
XmaI CCCGGG 1 cut(s) 112
XmiI GTMKAC 2 cut(s) 941, 1039
XmnI GAANNNNTTC 1 cut(s) 661
XspI CTAG 2 cut(s) 654, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.