Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001413

Physical Location & Seq

Genomic Coordinates Forward (+)

10789915 .. 10793443

Gene Structure 3529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCGGTCGATGCGAGCTCAATTGCAACGGAATCAATGAGAATTCTGATGGCCTCCGACCACACATCAGTGGTTTCGATGAACCTTTTCGTGGCGCTTCTCTGCGCTTGTATTCTACTCGGTCATTTGCTGGAAGAAAGTCGATGGATGAATGAGTCCATCACAGCCCTTGTAATTGGACTGTGCACAGGAGTTGTAATTTTGCTCACAACCGGAGGAAAAAGCTCACGTTTGTTAGTGTTTAGTGAAGATCGATCTTCTTTATATATCTGCTTCCGCCGATCATTTTTAATGCCGGGTAAGTTCCAGGTAAAGAAGAAGCAATTTTTTCGTAATTTCATAACTATCATGACGTTTGGTGCTGTTGGAACTCTCATATCCTTTGCCATCATATCGTTAGGTGCAATGCACTTTTTTCACAAGTTCAGTGTCGGTTCCCTCAAGATTGGAGATTATCTTGCACTTGGCGCGATATTTTCTGCAACCGATTCTGTTTGCACCTTACAGGTGCTGAATCAGGATGAAACGCCTTTGTTGTACAGCCTGGTTTTTGGGGAAGGTGTCGTTAATGATGCTACATCAATAGTGCTTTTCAATGCAATCCAGAGGATCGATCTCTCTCACATCAATACAAGCACTGCTTTGCAATTTTTTGGAAACTTTTTATATTTGTTTGTTACAAGTACAATCCTGGGAATCGTAGCTGGACTACTAAGTGCATTTATCATCAAGAAGCTCTACTTCGGCAGGCACTCAACTGATCGCGAAGTAGCTCTTATGATACTCATGGCTTACCTGTCATACATGCTGTCTGAACTATGTTATTTGAGTGCCATTCTCACTGTGTTCTTTTGCGGAATTGTTATGTCTCACTACACATGGCATAACGTGACTGAAAGTTCACGAGTGACAACTAAGCATACTTTTGCCACTCTCTCGTTTGTGGCGGAGATCTTTATCTTTCTTTATGTCGGCATGGATACCCTGGACATTGACAAGTGGAGATTTGTGAGTGATAGCCCTGGAAAATCCATGGCGGTGAGTTCGATACTGTTGGTACTCGTTCTGATTGGAAGAGCAGCCTTTGTTTTTCCCTTGTCTTTCTTATCCAACTTGACTAAGAAATCTCCACAAGACAAGCTTAGTTTAAAGCAGCAAGTTACAGTTTGGTGGGCGGGGCTTATGCGTGGCTCTGTTTCAATGGCACTTGCTTATAATCAGTTTAATAGGTCTGGCCATACGGACTTGCGTGCGAATGCGATCATGATCACCAGCACCATCACAGTTGTTCTTTTCAGCACAGTGGTTTTTGGTTTGATGACCAAACCGCTTGTGAGAATCTTGCTTCCTGTCTCAAAACACGTCTCGAGTATGATATCTTCTGAACCGTCTAGTCCAAAATCAATCGTTGTGCCACTACTCGGCAATGGCCAAGATTCAGAAGCGAACTGTGGGGTGGAAGATTCAGAGGCAAACATAGGACCCACGGACATACCCCGTCCAACTAGTTTACGAATGCTCTTAAGCTCTCCTTCTCACACCGTCCACCATTACTGGCGAAGATTTGATAATGCTTTCATGCGGCCTGTTTTTGGCGGGCGGGGTTTTGTGCCTTTCGTTCCAGGCTCACCCGTTGAAGAAATTGGAAATCAATGGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

554

Amino Acids

61.04

Weight (kDa)

8.81

Isoelectric Point (pI)

45.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	105 - 446	5.2e-51	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05030 AT3G05030 AT3G05030 AT3G05030 AT5G27150
fragaria_vesca	FvH4_4g17120 FvH4_4g17120 FvH4_6g04140
malus_domestica	MD00G1051300.v1.1 MD12G1232400.v1.1 MD13G1174300.v1.1 MD16G1175800.v1.1
prunus_persica	Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.6G335800_v2.0.a1
pyrus_communis	pycom12g21480 pycom13g14990 pycom16g14730
rosa_chinensis	RchiOBHm_Chr3g0452721 RchiOBHm_Chr4g0420901 RchiOBHm_Chr5g0080441
rosa_laevigata	RLG00000007726 RLG00000025572
rosa_multiflora	Rmu_sc0002006.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363300 Rroxscaffold_6G00429730
rosa_rugosa	Rorug02G0642900 Rorug02G0642900 Rorug04G0166900 Rorug04G0167000 Rorug04G0167100
rosa_samantha	Rh3AG045100 Rh3BG047600 Rh3CG046100 Rh3DG046400 Rh4BG231400 Rh4DG226500
rosa_wichuraiana	Rw3G003530 Rw4G019760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1215
AccII	CGCG	2 cut(s)	470, 765
AclWI	GGATC	1 cut(s)	617
AcoI	YGGCCR	2 cut(s)	1234, 1429
AcsI	RAATTY	1 cut(s)	42
AfaI	GTAC	3 cut(s)	539, 685, 1059
AfiI	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
AflII	CTTAAG	1 cut(s)	1522
AflIII	ACRYGT	1 cut(s)	1360
AgsI	TTSAA	3 cut(s)	595, 1200, 1637
AhlI	ACTAGT	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	1363
AjnI	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
AleI	CACNNNNGTG	1 cut(s)	68
AluBI	AGCT	7 cut(s)	18, 225, 704, 736, 773, 1141, 1527
AluI	AGCT	7 cut(s)	18, 225, 704, 736, 773, 1141, 1527
Alw21I	GWGCWC	2 cut(s)	20, 188
Alw26I	GTCTC	3 cut(s)	873, 1357, 1369
Alw44I	GTGCAC	1 cut(s)	184
AlwI	GGATC	1 cut(s)	617
AlwNI	CAGNNNCTG	1 cut(s)	511
Ama87I	CYCGRG	1 cut(s)	1366
AoxI	GGCC	4 cut(s)	51, 1234, 1429, 1583
ApaLI	GTGCAC	1 cut(s)	184
ApeKI	GCWGC	2 cut(s)	1079, 1153
ApoI	RAATTY	1 cut(s)	42
Asp700I	GAANNNNTTC	1 cut(s)	86
AspLEI	GCGC	3 cut(s)	97, 107, 470
AspS9I	GGNCC	1 cut(s)	1481
AsuC2I	CCSGG	1 cut(s)	297
AsuHPI	GGTGA	3 cut(s)	1051, 1261, 1620
AvaI	CYCGRG	1 cut(s)	1366
AvaII	GGWCC	1 cut(s)	1481
BaeGI	GKGCMC	1 cut(s)	188
BalI	TGGCCA	2 cut(s)	1236, 1431
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	1363, 1395
BauI	CACGAG	1 cut(s)	903
Bbv12I	GWGCWC	2 cut(s)	20, 188
BbvI	GCAGC	2 cut(s)	1091, 1165
BccI	CCATC	5 cut(s)	43, 138, 167, 395, 1286
BcgI	CGANNNNNNTGC	2 cut(s)	311, 345
BciT130I	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
BciVI	GTATCC	1 cut(s)	973
BclI	TGATCA	1 cut(s)	1266
BcnI	CCSGG	1 cut(s)	297
BcoDI	GTCTC	3 cut(s)	873, 1357, 1369
BcuI	ACTAGT	1 cut(s)	1505
BfaI	CTAG	2 cut(s)	1392, 1506
BfoI	RGCGCY	1 cut(s)	98
BfrI	CTTAAG	1 cut(s)	1522
BfuI	GTATCC	1 cut(s)	973
BglII	AGATCT	1 cut(s)	951
BisI	GCNGC	3 cut(s)	1080, 1154, 1583
BlsI	GCNGC	3 cut(s)	1081, 1155, 1584
Bme1390I	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
Bme18I	GGWCC	1 cut(s)	1481
BmeT110I	CYCGRG	1 cut(s)	1366
BmgBI	CACGTC	1 cut(s)	1363
BmgT120I	GGNCC	1 cut(s)	1481
BmiI	GGNNCC	2 cut(s)	436, 1483
BmrFI	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
BmsI	GCATC	1 cut(s)	562
BpuEI	CTTGAG	1 cut(s)	425
BpuMI	CCSGG	1 cut(s)	297
Bsa29I	ATCGAT	2 cut(s)	253, 612
BsaBI	GATNNNNATC	2 cut(s)	956, 1265
BsaJI	CCNNGG	5 cut(s)	691, 984, 1021, 1032, 1485
BsaWI	WCCGGW	1 cut(s)	212
Bsc4I	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
Bse1I	ACTGG	1 cut(s)	1559
Bse3DI	GCAATG	2 cut(s)	411, 1432
Bse8I	GATNNNNATC	2 cut(s)	956, 1265
BseBI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
BseCI	ATCGAT	2 cut(s)	253, 612
BseDI	CCNNGG	5 cut(s)	691, 984, 1021, 1032, 1485
BseGI	GGATG	2 cut(s)	153, 526
BseJI	GATNNNNATC	2 cut(s)	956, 1265
BseLI	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
BseMI	GCAATG	2 cut(s)	411, 1432
BseNI	ACTGG	1 cut(s)	1559
BseSI	GKGCMC	1 cut(s)	188
BseXI	GCAGC	2 cut(s)	1091, 1165
Bsh1236I	CGCG	2 cut(s)	470, 765
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BshVI	ATCGAT	2 cut(s)	253, 612
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	20, 188
BsiHKCI	CYCGRG	1 cut(s)	1366
BsiSI	CCGG	2 cut(s)	213, 296
BslI	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
BsmAI	GTCTC	3 cut(s)	873, 1357, 1369
BsmBI	CGTCTC	1 cut(s)	1369
BsmI	GAATGC	2 cut(s)	1261, 1521
BsnI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BsoBI	CYCGRG	1 cut(s)	1366
Bsp1286I	GDGCHC	2 cut(s)	20, 188
Bsp1407I	TGTACA	1 cut(s)	537
Bsp143I	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
Bsp19I	CCATGG	1 cut(s)	1032
Bsp68I	TCGCGA	1 cut(s)	765
BspANI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BspDI	ATCGAT	2 cut(s)	253, 612
BspFNI	CGCG	2 cut(s)	470, 765
BspHI	TCATGA	2 cut(s)	348, 1263
BspLI	GGNNCC	2 cut(s)	436, 1483
BspPI	GGATC	1 cut(s)	617
BspQI	GCTCTTC	1 cut(s)	1069
BspTI	CTTAAG	1 cut(s)	1522
BsrDI	GCAATG	2 cut(s)	411, 1432
BsrGI	TGTACA	1 cut(s)	537
BsrI	ACTGG	1 cut(s)	1559
BssECI	CCNNGG	5 cut(s)	691, 984, 1021, 1032, 1485
BssMI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
BssSI	CACGAG	1 cut(s)	903
BssT1I	CCWWGG	1 cut(s)	1032
Bst2BI	CACGAG	1 cut(s)	903
Bst2UI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
Bst4CI	ACNGT	9 cut(s)	183, 844, 1053, 1165, 1285, 1303, 1389, 1451, 1543
Bst6I	CTCTTC	1 cut(s)	1069
BstAFI	CTTAAG	1 cut(s)	1522
BstAUI	TGTACA	1 cut(s)	537
BstC8I	GCNNGC	4 cut(s)	16, 749, 1251, 1598
BstDEI	CTNAG	4 cut(s)	713, 915, 1119, 1142
BstDSI	CCRYGG	2 cut(s)	1032, 1485
BstF5I	GGATG	2 cut(s)	153, 526
BstFNI	CGCG	2 cut(s)	470, 765
BstH2I	RGCGCY	1 cut(s)	98
BstHHI	GCGC	3 cut(s)	97, 107, 470
BstKTI	GATC	9 cut(s)	253, 257, 284, 612, 616, 763, 954, 1263, 1269
BstMAI	GTCTC	3 cut(s)	873, 1357, 1369
BstMBI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 467
BstNI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
BstNSI	RCATGY	1 cut(s)	808
BstSCI	CCNGG	7 cut(s)	295, 306, 543, 690, 984, 1021, 1621
BstSLI	GKGCMC	1 cut(s)	188
BstUI	CGCG	2 cut(s)	470, 765
BstV1I	GCAGC	2 cut(s)	1091, 1165
BstX2I	RGATCY	1 cut(s)	951
BstYI	RGATCY	1 cut(s)	951
Bsu15I	ATCGAT	2 cut(s)	253, 612
BsuI	GTATCC	1 cut(s)	973
BsuRI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BsuTUI	ATCGAT	2 cut(s)	253, 612
BtgI	CCRYGG	2 cut(s)	1032, 1485
BtrI	CACGTC	1 cut(s)	1363
BtsCI	GGATG	2 cut(s)	153, 526
BtsI	GCAGTG	1 cut(s)	636
BtsIMutI	CAGTG	5 cut(s)	75, 433, 636, 840, 1308
BtuMI	TCGCGA	1 cut(s)	765
Cac8I	GCNNGC	4 cut(s)	16, 749, 1251, 1598
CaiI	CAGNNNCTG	1 cut(s)	511
CciI	TCATGA	2 cut(s)	348, 1263
CfoI	GCGC	3 cut(s)	97, 107, 470
Cfr13I	GGNCC	1 cut(s)	1481
ClaI	ATCGAT	2 cut(s)	253, 612
Csp6I	GTAC	3 cut(s)	538, 684, 1058
CviAII	CATG	8 cut(s)	349, 787, 805, 879, 976, 1033, 1264, 1579
CviQI	GTAC	3 cut(s)	538, 684, 1058
DdeI	CTNAG	4 cut(s)	713, 915, 1119, 1142
DpnI	GATC	9 cut(s)	252, 256, 283, 611, 615, 762, 953, 1262, 1268
DpnII	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
DraI	TTTAAA	1 cut(s)	1149
EaeI	YGGCCR	2 cut(s)	1234, 1429
Eam1104I	CTCTTC	1 cut(s)	1069
EarI	CTCTTC	1 cut(s)	1069
EciI	GGCGGA	2 cut(s)	266, 962
Ecl136II	GAGCTC	1 cut(s)	18
Eco130I	CCWWGG	1 cut(s)	1032
Eco24I	GRGCYC	1 cut(s)	20
Eco32I	GATATC	1 cut(s)	1377
Eco47I	GGWCC	1 cut(s)	1481
Eco53kI	GAGCTC	1 cut(s)	18
Eco88I	CYCGRG	1 cut(s)	1366
EcoICRI	GAGCTC	1 cut(s)	18
EcoO109I	RGGNCCY	1 cut(s)	1481
EcoRI	GAATTC	1 cut(s)	42
EcoRII	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
EcoRV	GATATC	1 cut(s)	1377
EcoT14I	CCWWGG	1 cut(s)	1032
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	1 cut(s)	1032
Esp3I	CGTCTC	1 cut(s)	1369
FaeI	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
FatI	CATG	8 cut(s)	348, 786, 804, 878, 975, 1032, 1263, 1578
FauI	CCCGC	3 cut(s)	1168, 1589, 1593
FbaI	TGATCA	1 cut(s)	1266
Fnu4HI	GCNGC	3 cut(s)	1080, 1154, 1583
FokI	GGATG	2 cut(s)	160, 533
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	3 cut(s)	1080, 1154, 1583
FspBI	CTAG	2 cut(s)	1392, 1506
GlaI	GCGC	3 cut(s)	96, 106, 469
GluI	GCNGC	3 cut(s)	1080, 1154, 1583
HaeII	RGCGCY	1 cut(s)	98
HaeIII	GGCC	4 cut(s)	53, 1236, 1431, 1585
HapII	CCGG	2 cut(s)	213, 296
HhaI	GCGC	3 cut(s)	97, 107, 470
Hin1II	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
Hin6I	GCGC	3 cut(s)	95, 105, 468
HinP1I	GCGC	3 cut(s)	95, 105, 468
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	8 cut(s)	32, 155, 488, 514, 696, 1338, 1436, 1463
HpaII	CCGG	2 cut(s)	213, 296
HphI	GGTGA	3 cut(s)	1051, 1261, 1620
Hpy166II	GTNNAC	4 cut(s)	186, 902, 1511, 1546
Hpy188I	TCNGA	7 cut(s)	48, 58, 814, 1068, 1384, 1441, 1468
Hpy188III	TCNNGA	9 cut(s)	349, 442, 518, 604, 730, 764, 903, 1264, 1366
Hpy8I	GTNNAC	4 cut(s)	186, 902, 1511, 1546
HpyAV	CCTTC	2 cut(s)	551, 1542
HpyCH4III	ACNGT	9 cut(s)	183, 844, 1053, 1165, 1285, 1303, 1389, 1451, 1543
HpyCH4IV	ACGT	4 cut(s)	229, 353, 888, 1362
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 467
HpyF3I	CTNAG	4 cut(s)	713, 915, 1119, 1142
HpySE526I	ACGT	4 cut(s)	229, 353, 888, 1362
Hsp92II	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
HspAI	GCGC	3 cut(s)	95, 105, 468
Ksp22I	TGATCA	1 cut(s)	1266
Kzo9I	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
LguI	GCTCTTC	1 cut(s)	1069
Lsp1109I	GCAGC	2 cut(s)	1091, 1165
LweI	GCATC	1 cut(s)	562
MaeI	CTAG	2 cut(s)	1392, 1506
MaeII	ACGT	4 cut(s)	229, 353, 888, 1362
MaeIII	GTNAC	4 cut(s)	676, 889, 907, 1159
MalI	GATC	9 cut(s)	252, 256, 283, 611, 615, 762, 953, 1262, 1268
MboI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
MboII	GAAGA	9 cut(s)	146, 249, 260, 328, 1086, 1371, 1472, 1572, 1649
MfeI	CAATTG	1 cut(s)	21
MflI	RGATCY	1 cut(s)	951
MhlI	GDGCHC	2 cut(s)	20, 188
MlsI	TGGCCA	2 cut(s)	1236, 1431
MluCI	AATT	9 cut(s)	21, 42, 174, 198, 323, 334, 647, 858, 1641
MluNI	TGGCCA	2 cut(s)	1236, 1431
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	4 cut(s)	81, 346, 1134, 1526
MnlI	CCTC	5 cut(s)	64, 209, 449, 600, 1462
Mox20I	TGGCCA	2 cut(s)	1236, 1431
MroXI	GAANNNNTTC	1 cut(s)	86
MscI	TGGCCA	2 cut(s)	1236, 1431
MseI	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
MslI	CAYNNNNRTG	2 cut(s)	68, 1037
Msp20I	TGGCCA	2 cut(s)	1236, 1431
MspCI	CTTAAG	1 cut(s)	1522
MspI	CCGG	2 cut(s)	213, 296
MspR9I	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
MunI	CAATTG	1 cut(s)	21
Mva1269I	GAATGC	2 cut(s)	1261, 1521
MvaI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
MvnI	CGCG	2 cut(s)	470, 765
MwoI	GCNNNNNNNGC	2 cut(s)	11, 467
NciI	CCSGG	1 cut(s)	297
NcoI	CCATGG	1 cut(s)	1032
NdeII	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
NlaIII	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
NlaIV	GGNNCC	2 cut(s)	436, 1483
NmeAIII	GCCGAG	1 cut(s)	1401
NmuCI	GTSAC	2 cut(s)	889, 907
NruI	TCGCGA	1 cut(s)	765
NspI	RCATGY	1 cut(s)	808
OliI	CACNNNNGTG	1 cut(s)	68
PaeR7I	CTCGAG	1 cut(s)	1366
PagI	TCATGA	2 cut(s)	348, 1263
PciSI	GCTCTTC	1 cut(s)	1069
PctI	GAATGC	2 cut(s)	1261, 1521
PdmI	GAANNNNTTC	1 cut(s)	86
PfeI	GAWTC	7 cut(s)	32, 488, 514, 696, 1338, 1436, 1463
PkrI	GCNGC	3 cut(s)	1081, 1155, 1584
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PpuMI	RGGWCCY	1 cut(s)	1481
PsiI	TTATAA	1 cut(s)	1215
Psp124BI	GAGCTC	1 cut(s)	20
Psp5II	RGGWCCY	1 cut(s)	1481
Psp6I	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
PspGI	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
PspN4I	GGNNCC	2 cut(s)	436, 1483
PspPI	GGNCC	1 cut(s)	1481
PspPPI	RGGWCCY	1 cut(s)	1481
PstNI	CAGNNNCTG	1 cut(s)	511
PsuI	RGATCY	1 cut(s)	951
RruI	TCGCGA	1 cut(s)	765
RsaI	GTAC	3 cut(s)	539, 685, 1059
RsaNI	GTAC	3 cut(s)	538, 684, 1058
RseI	CAYNNNNRTG	2 cut(s)	68, 1037
SacI	GAGCTC	1 cut(s)	20
SapI	GCTCTTC	1 cut(s)	1069
SaqAI	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
SatI	GCNGC	3 cut(s)	1080, 1154, 1583
Sau3AI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
Sau96I	GGNCC	1 cut(s)	1481
SchI	GAGTC	1 cut(s)	164
ScrFI	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
SduI	GDGCHC	2 cut(s)	20, 188
SfaNI	GCATC	1 cut(s)	562
Sfr274I	CTCGAG	1 cut(s)	1366
SinI	GGWCC	1 cut(s)	1481
SlaI	CTCGAG	1 cut(s)	1366
SmiMI	CAYNNNNRTG	2 cut(s)	68, 1037
SmlI	CTYRAG	3 cut(s)	440, 1366, 1522
SmoI	CTYRAG	3 cut(s)	440, 1366, 1522
SpeI	ACTAGT	1 cut(s)	1505
Sse9I	AATT	9 cut(s)	21, 42, 174, 198, 323, 334, 647, 858, 1641
SspMI	CTAG	2 cut(s)	1392, 1506
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	7 cut(s)	295, 306, 543, 690, 984, 1021, 1621
StyI	CCWWGG	1 cut(s)	1032
TaaI	ACNGT	9 cut(s)	183, 844, 1053, 1165, 1285, 1303, 1389, 1451, 1543
TaiI	ACGT	4 cut(s)	232, 356, 891, 1365
TaqI	TCGA	7 cut(s)	9, 77, 142, 253, 612, 1046, 1367
TaqII	GACCGA	1 cut(s)	110
TasI	AATT	9 cut(s)	21, 42, 174, 198, 323, 334, 647, 858, 1641
TatI	WGTACW	2 cut(s)	537, 683
TauI	GCSGC	1 cut(s)	1585
TfiI	GAWTC	7 cut(s)	32, 488, 514, 696, 1338, 1436, 1463
Tru1I	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
Tru9I	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
TscAI	CASTG	5 cut(s)	75, 433, 643, 847, 1308
TseFI	GTSAC	2 cut(s)	889, 907
TseI	GCWGC	2 cut(s)	1079, 1153
Tsp45I	GTSAC	2 cut(s)	889, 907
TspDTI	ATGAA	5 cut(s)	95, 164, 328, 537, 1567
TspGWI	ACGGA	3 cut(s)	44, 1256, 1502
TspRI	CASTG	5 cut(s)	75, 433, 643, 847, 1308
Vha464I	CTTAAG	1 cut(s)	1522
VneI	GTGCAC	1 cut(s)	184
VpaK11BI	GGWCC	1 cut(s)	1481
XapI	RAATTY	1 cut(s)	42
XceI	RCATGY	1 cut(s)	808
XhoI	CTCGAG	1 cut(s)	1366
XmnI	GAANNNNTTC	1 cut(s)	86
XspI	CTAG	2 cut(s)	1392, 1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.