pycom17g15020

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0001657
Physical Location & Seq
Forward (+)
12806862 .. 12819476
12615 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 7806 bp
ATGCTTGCTTGCCAACAATTAGATATCAGATATGCTCTTACAGAGCTTGAGGAGTGCTGGATCTCTATGAAAGCATTAAGTACCACTTTGCCCTTGAATGGTGAAAGTGAGAGCCATATTCTGTATTCATCTGGAAATCAGTCTTCTACGAATGCTTTACATCAACGTAATACTGGGTTTAGCAACAGCAGTGATGATTCTGCCACAAACATTGAAAATACTGAACCCTGCTTTATTTTACAGTATGAGTCTCTTAGGAATGAGTCAGTTCGCCAAAAATGTAGAATATGCTTGAATAACACTGATATCCACTGCTACCCATATGTAATCAGACTGTTGATTGAATTTTTTGATAAGCTAGCTGGTATGAACTCTTTTAACTCATCTGTGGATGCTGGGAATCCAAACAAGGTTGGTGGTTTTGGGTTTGAAAGGTTTGGTTTCTCAAACTTCTTGGAAAGTGGTTCCTGTGAGCATGCAAGCATACCTGTAGATCGTTTTCCTTTTGTTACACTATGCAATTCTGGTTCCCTTGGTAGCCTTGAAAGTTCTTTACTTTATGCCAGTCATGACTGGAGAAAATATTTCACTTTGAAGGACAGCAGAATCATCAGTCCACAATCCAACACAAAGAAGGTATCTAAATATTTTCATGCCACACCATTAGAGTCCACATCTATTGCTGCAGCATCTGATGTGGATGGGAGTTCTGCTGACAGTGGTACTGTATTTGTTATTGATTTAGATCTGTGTGGAATCAGAGTGCATTTTCATGATTCCTCATGCATCATTGGAACAATTTCCCTGCCTACATCTCACTCATCTGTAATCATTTCTGAAGACAACTTTGACATCTTAAGTTCTGCAGAGGGATTAGTTCTCACGTCATCTTGGTGGCCACAGAACTTACGTGAGTTTCTATGGGGGCCCTCACTCCCGAGTTTATCTCCTATTTTAAACGTAAGAGTGAGGAAAGAAAGCTGTGGGCCATTGAGTTCTTGCATTGAAGTATGCTTCAGCATTCAGCATGTATATTGTATTTTACCTCCCGAGTATCTGGCAATAATAATTGGTTACTTTTTGTTGCCTGATTGGAGTTCAGATTCAACTGAGCAGCCTGTCACCGTATCGCATGACTACACTGGAACTGAAAATGAGTGTTCACTTGCATATAAAATTGAGATACTAGACTGTACTTTGATATTGCCCATCAAAAGCAATGAGGGTCAGTTTCTAAAGGCAGGACTTCAGCAGTTGTATTGTAGCTTTATTCATCACAGCAGTTTAACTAATGTATTGAAGGATATTCCTCCTGAATGTTGGGTTCCCGGGCATAAACTTTCAGAAAGAAATCACTGTTTGAATTTATTTGGACGAGACTTGCTCCTGTCATTCCTCTCTTTCAAGGACGATGAATGCAGTGTCTCAAAGTTTGATCAAGATACTGATTGTGTAGACATTCCATTAGTTGTACCCTTATGTGCTGACGTTTGGGTCAAGATACCTTGTGAAAATGAATTATCAAGTTCCTCAACCACCTGTATCATGACGAGGATTGGGCACTGTCAACTTATGGTTGAGGGTGCTCACTTTTTTTGTGGGCTTGAGGGACTAATTGATGTTATAAATGAATTTTCCCAAGTTTCCGATTTATCGAAATGTTTCAAATCTGATGTTCCACAGTTTCTTCAGTTAAAGAGGTGCCTAGAACAGAATAATGCAGTTACACCTGTTGTTTCAAGCATTACATTTTCAGAAGTTAAATGCTATTGCAAATCATTGTCGATACAGTTAAATGGCTGCAGAAGAGACTTGAAAGAACCTATAGCTAAGGCTGAAATGCAATTTATGTGTTCTGCATCATTGAGAGATGACATTCTCTTAAGTGTTGTGCTTAGCTTTTCCTCATTGGCATTATATTCTTTACCTGGTTCTGTTGTATTAGCAAGATTCAAATCCACATCAACCTCATCTGTTCTTGATTTTTCTCTTTCAAAATCAAATGAAGATGGGAATGAGCTGCTGGTTTCTTTGCCTTCTGTTGATGTGTGGTTTTATTTGTCTTACTGGACTGATGTAATTGACTGTTTGAAATCTTATCCGGGACATTCATCCCCAACTACACTTGACAACTTAAGGCAGGAGGCCGATGTTCTGATTGTTAGGTCAGAAAATATTTGCGTAACATTTCACTTTCCTGTCTGGATTGGTGATGAAGGTGGGGGGGAATATCAGGTAGATGAAGATCGTGTCGAGGGTAATCAAAATGATTTATCTGACTTGGTCAAAGGAAAAAACTTTAGATGCCTTGCGGTTACTTTATGCAGTAAAAGTAGTGAACTTTTTGTTGATGCAAGAAGTGTGAAATTCAAGTCTGACATGGAAAAACTGAATGGTACCGTATTGCTAAGCGAGGACAAAAGTGTTCTATCATGGCCTCTTTTCCAGATATGTCAGGGTACTTTTGAAGCTGAGATTAACCAGAATGAGCTTGTGCATGTTGAAGTAGATGCTCAATGTGATCATTTAGATGTATGGATTTCACACAGCATTCTCCACTTATGGCATGGCGTACCATTCACTGTTTCTGAAGGAGGGCCTTCTCAGTTTTCTTACGGTGGAATTGCTTTTAAAGTCCAATTTAGAAAGGTTTCTTTTCTTCTAAGTGATGGAAGGTGGAGTTGTAGTGGACCGCTGTTTCAAATTCTTATGGGTAACATCCTCTTTTGTGGTAATGTGACTCAAAAAAGCCTTGAAGGTTCAGTCAGTGGTGACCTTCAAGTGAACTACAATAACATTCACAAGGTCTTCTGGGAGCCTTTTGTCGAGCCTTGGAAGTTTGAGGTTGATGTGATTAGAAAGCAAGAGATGAGTCTCAACAGCTCCATGTTGACAGATGTCAATCTCAAATCGCCTGCGCACCTTAATCTGAACTTCACTGAATCCCTAATAGAGTGTGTTTTCAGGGCATTTGAGATGATTAAGGATGCTTGGGTTCTGATGGGTCCAAATGATCTTCCCGGAAGCCAAAATTTTTTAAATTCTCCTTATTCTGAATATACATATGCAGGAAAATACGCTCCTTATGTACTTCAAAATTTGACATCTCTGCCTCTAGTATACGACGTTTATCGAGGCCCAGTTAATCTTGGTGTGTTTGATGTCTCAAAGATGAAGAACAGAAAGTATGTGCAACCGGGTTCCTCTATTCCAATCTATATCAACGATACTCCTGAGGAACAACTTATTAATGTTAAGACAGCACACTTTTCTGAGAGGCTTTTTGAGCAGAAGGCAAATGGGGTTGCTCATCAGTACATTACCATTCAATTTGATGGATCATCGATATCGTCTGATCCTATCTCAATGGATCTTGTAGGACTTACCTACTTTGAGGCTGACTTTTCAACTGCTTACAATGACAATATGGAAAATAATAGAACAAATACAGTTGGTGGTTTTGTTGTTCCAGTTGTATTTGATGTTTCAGTGCAGCGTTACAGCAAATTAATACGATTGTACTCAACGGTGATACTTTCAAATTCAACTTCAACGCCACTTGAGCTGCGATTTGATATTCCATTTGGTGTTGCCCCTATGATATTAGATCCACTAAACCCTGGTCAAGAGTTGCCACTGCCTCTCCATTTGGCTGAGGCTGGTAGGATTAGATGGCGTCCAGTTGGAGATTCTTATCTCTGGAGCGAAGTTTATAACCTTTCAAACCTGCTTTCTCAGGAGACTAAAGTTGGATTTCTTAAGTCCTTTGTCTGCTATCCAGCTCATCCAAATAGTGATCCCTTTCGTTGTTGCATTTCCATTCGAAATATCAGGTTGCCCTCATCTGTTAGGTCAAGGAAGACTTCACATCTCAAGAGTAGTCTAAACCAAACAGTTGGGAGTCATGATGAAAGATTGAAAAAGTTAGATGAGTCAAAGAAGCAGTTCGTTCACCAAATGACTCTCAGTATCCCTTTAGTAGTTAATAACTACCTTCCAAAGGAAGTGACATTGACGATAGAAAGTGGTGGGATTACTCGGACTGCATTTCTTTCAGAGGTGGAAACTTCCTTTCATAATGTTGATCCTTCACATCACCTGAAACTTGAGATCCATATGCAAGGGTTCAAACCAGCTGTTTTGAATTTTCCTCGTACTGAAACATTTTGTAAAATGGCTAAGTTTGGTGGAGCCAAGTTTTCACTTTCTGAAATTGTGGCCTTTTATACAGACTCATCAAATGGTCCTGCATATGTTACCGTGGAAAAGGTGTTGGATGCATTTTCTGGTGCCAGGGAACTCTTCATTTTTGTTCCCTTTCTGTTGTATAATTGCACTGGTTTCCCTCTTGTCATTCAACATGCTTCCAGTGAAATGAGAGTAAGTTGTACAGTTCCTTCTTGTTATCATATGGCTGAACAAGAGCTTCTTCAGGACAAGAAAGATGGTCTCAGTACGGTTTCTTCTAGCCATCATCTGCGTGCTACGGATTCATATGGTCTAGGAAATTCTTCCTCAAGAGGTCATGTTGTCTCAGTTAGAGAGAATGTGAATCCACACAAAGAAATATTTCTTTGCAAACCTTTGAATCCATCGAACTCTGAACAAAATCTTCATGAGTTTTCGAGCAAAAGGGATTTAGACCGTAGCAAAAGTGATTTAGATGGTCAAAATTCTCTTTCTAATAGATCACATAACAGATCGAGTTCAAGCAGTCAGTTGACCGTAAAAGATTCGAATTTTAATGGTTTTGAGCGTGGAAGGGCTAGGGCATGCATGTTCTCACCTAACCCCAATTCCTCTGCTGGTGAAGTTATGGTTAGAGCAAGTAGGTGTCTGCCTGAATTTGTAATTGAAAAGATACCAAATTCTCTATGGTCAAGTCCATTTTCCCTTGTTCCACCTAGTGATTCAACCACCGTCCTTGTTCCACATCCATCATCAAGTGCAGCAATCATGTTGTCTGTAACATCTAGTGCAGTTGCTGCACCATTTGCTGGAAGGACAAGTGCCATCACTTTCCAGCCCAGGTACATCATCAGCAATGCATGCAGCAAGGACTTATGTTATAAGCAAAAAGGGACTGATATCGTTTTTCATTTAGGCATAGGAGAACATTCTCATCTTCACTGGATGGATACAGCCAGGGAGTTACTGGTTTCCATCCGTTACGATGAACCTGGATGGCATTGGTCAGGTGGCTTCTTGCCTGATCATCTTGGCGATACTCAAGTGAAATTGCGGAATTATCTTTCTGGTTCATTAAATATGATACGGGTTGAAGTGCAGAATGCTGATGTCTCTCCAGGAGATGAAAAAATTATTGGAAACTTCCATGGAAATTCTGGGACAAATTTGATTCTCATATCAGATGATGAGACTGGATACATGCCCTACAGAATTGATAATTTTTCAAACGAGAGGCTAAGGATTTACCAGCAGAGGTGTGAAACTTTTGAAACAATTGTTCACTCTTACACATCTTGCCCTTATGCCTGGGACGAACCATGCTATCCACACCGTCTCACCATGGAGGTACCCGGAAAGCGTGTTTTGGGGTCATACGCTCTTGATGATGTGAAAGAGTACAGTCCAGTGCAAGTACCATCATCTTCTGAGAAACCTGAGAGGACATTGCATTTATCTGTCCATGCTGAGGGAGCAACTAAGGTCCTCCATGTTATTGATTCAAGTTACCATGTTGTGAGTGACATGACGAATCCAACTGTTCCTCACTTGAGAGAGAAAGGGAAACATGAACAGAAACAGGACAAGGTTGTAGGTTTCATGGAAAGAATTTCAATTGTTATTCAACACATTGGTATCTCCATGATCAATATTCATCCACAGGAATTGATTTTTGCTAGTGCAAAGAACATTAGAATTGATCTTGTACAGAGTTTGGATCAACAAAAGCTTTCCTTGCAAATCACATCATTGCAAATTGATAACCAACTGCGTTCTACCCCATATCCTGTTATCCTGTCCTTTGACCGTGATTATAAAAGCAATCCAATTGGCCATGCGATTAAGGATGACGCCATGAAACCAATAAGTGAAAGACTGCTTCAAAGGACTTCTCACAGCTCTTTCGAACCTGTTTTCTACCTTGCTGTATCAAAATGGAGGAAGAAAGATGTCTCATTGGTTTCGTTTGAATATATCAGCTTAAGAGTTGCTGACTTCTGTCTTGAGCTGGAGCAAGAATTGATATTAAGCCTGTTTGACTTCATAAAAAATGTTACTTCAAGGTTCCAGAGTAGAGTTTTTCCATTGTCGGATCCATTCCTGCGCTCTCGTATCAATGACTCAGGTTTAATGGATTCCTTTGCAACAGAGAAACAACTTCACTTAATGACTGCTCCTGTTTCTGCTGAAAACCACAAACCGAGACTCTCTCTACCTTCAATTGTTCCAATTGGAGCTCCATGGCAGCAAATTTACCTATTGGCTAGAAGACAGAAAAAGATCTTTGTCGAAGTGTTTGATTTTGGCCCCATCAACTTGACCTTAAGCTTTTCCAGTGCTCCGTGGATGCTTAGAAATGGGATTCTTACCGCAGGAGAATCTGTTATCCATAGAGGTCTTATGGCTCTTGCTGATGTTGAGGGTGCACGAATTCATCTCAAGCAGCTGACAATTACACATCAAATTGCTAGTTCAGAGTCCCTTCAAGAGATCCTTGTAAGGCATTATACTCGGCAACTTCTTCATGAGATGTATAAGGTGTTTGGTTCTGCTGGTGTTATAGGCAATCCCATGGGATTTGCAAGGAGTATGGGGCTTGGCATTAGAGATTTCTTGTCAGTGCCTGCTAGGAGCATTTTTCTGAGCCCCACTGGACTAATTACTGGCATGGCACAAGGCACCACCAGTCTTTTAAGTAACACTGTCTACGCTATAAGTGATGCTGCCACACAATTCAGCAAAGCTGCGCACAAGGGAATCGTGGCATTTACATTTGATGACCAGGCTGTTTCAGAAGTGGAACAGCAGCAGAGTGGTATTGCTACTCATTCTAAAGGTGTGATAAATGGAGTATTTGAGGGACTCACAGGTCTTCTTCAATCACCAATTAAAGGAGCTGAGAAACATGGCCTTCCTGGTGTCCTTTCAGGCATAGCTTTAGGTATTACAGGACTAGTAGCAAAACCGGCTGCTAGTATTCTTGAAGTTACTGGAAAAACTGCACAGAGTATCAGAAATCGGAGTAGGCTCTATCAAATGGGACAACAGCGCTTAAGAGTCCGTCTTCCAAGGCCTTTAAGCAGGGAACTCCCCTTAAGACCTTATTCTTGGGAAGATGCTGTTGGAACTTCAGTGCTTGTTGAGGTGGATGATAGTTTGAGGCTCAAGGATGAGATTTTAGTCTTGTGCAAGGAACTTAGACAAGCTGGTAAATTTGTCATCATTACACAGAGGCTTGTATTGATTGTTAGCTGCTCAAATCTGGTGGACTTAGGCAAGCCTGAATTTCGAGGTGTTCCTGCTGACCTTGACTGGGTAATTGAATCTGAAATCCGTTTGGAGAGTGTTATACATGCTGACTGTGATGAAGGAATAGTGCATATAGTCGGAAGCAGTTCAGATGCCCCTTTGCGGCAAAACCAGCAAACTAAAAGCAGCAGAGGAACACGGGCAGTTCGTTGGAACAATCCTACTGTTCCTCTCATACAGACAAACCTGGAACTGGCTCGCAAAGACGATGCGGATAATTTGTTGCAGATTTTGTTGTCTGCAATAGAATTAGGAAAGGAGCACGGTTGGGGATGTAGGTATGTTCTGCAACGAAGTAACATCAAATAA

Protein Analysis

2602

Amino Acids

290.14

Weight (kDa)

5.96

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_M PF25033 919 - 983 1.2e-06 VPS13-like family middle region
VPS13_VAB PF25036 1159 - 1467 1.4e-12 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_VAB PF25036 1561 - 1837 3.7e-24 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 2416 - 2485 2e-07 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1625, 3714, 5070, 6003
AasI GACNNNNNNGTC 2 cut(s) 1493, 7056
Acc16I TGCGCA 2 cut(s) 2919, 6936
Acc36I ACCTGC 1 cut(s) 3735
Acc65I GGTACC 2 cut(s) 2396, 5536
AccB1I GGYRCC 5 cut(s) 1701, 2396, 4289, 5536, 6866
AccB7I CCANNNNNTGG 1 cut(s) 4997
AccI GTMKAC 3 cut(s) 1455, 3120, 6894
AciI CCGC 6 cut(s) 2312, 2693, 5242, 6558, 7600, 7709
AcoI YGGCCR 2 cut(s) 896, 6019
AcuI CTGAAG 7 cut(s) 858, 1000, 1232, 1673, 2610, 4415, 7302
AcyI GRCGYC 2 cut(s) 3676, 6039
AdeI CACNNNGTG 1 cut(s) 4907
AfeI AGCGCT 1 cut(s) 7238
AfiI CCNNNNNNNGG 8 cut(s) 98, 4000, 4997, 5656, 7079, 7501, 7599, 7690
AflII CTTAAG 8 cut(s) 856, 1882, 2134, 3758, 6169, 6511, 7240, 7282
AhlI ACTAGT 1 cut(s) 7141
AjiI CACGTC 1 cut(s) 885
AjuI GAANNNNNNNTTGG 4 cut(s) 5307, 5339, 7293, 7325
Alw21I GWGCWC 5 cut(s) 1588, 6427, 6529, 6616, 7761
Alw44I GTGCAC 1 cut(s) 6612
AlwNI CAGNNNCTG 3 cut(s) 692, 4985, 6812
Ama87I CYCGRG 3 cut(s) 937, 1049, 1328
Aor51HI AGCGCT 1 cut(s) 7238
ApaI GGGCCC 1 cut(s) 930
ApaLI GTGCAC 1 cut(s) 6612
AseI ATTAAT 2 cut(s) 3249, 3509
Asp700I GAANNNNTTC 7 cut(s) 799, 1661, 2650, 3944, 4510, 4569, 7582
Asp718I GGTACC 2 cut(s) 2396, 5536
AspLEI GCGC 4 cut(s) 2920, 6294, 6937, 7239
AsuC2I CCSGG 6 cut(s) 1329, 1330, 2103, 3021, 3198, 5541
AsuII TTCGAA 3 cut(s) 3823, 4736, 6093
AsuNHI GCTAGC 1 cut(s) 358
AvaI CYCGRG 3 cut(s) 937, 1049, 1328
AvaII GGWCC 4 cut(s) 2690, 3005, 4244, 5671
AxyI CCTNAGG 1 cut(s) 3234
BaeGI GKGCMC 3 cut(s) 930, 1563, 6616
BaeI ACNNNNGTAYC 4 cut(s) 5217, 5250, 5806, 5839
BalI TGGCCA 2 cut(s) 898, 6021
BamHI GGATCC 1 cut(s) 6280
BanI GGYRCC 5 cut(s) 1701, 2396, 4289, 5536, 6866
BanII GRGCYC 3 cut(s) 930, 6427, 6836
BarI GAAGNNNNNNTAC 4 cut(s) 4381, 4413, 4447, 4479
BbsI GAAGAC 7 cut(s) 135, 846, 2800, 3866, 6463, 7052, 7244
Bbv12I GWGCWC 5 cut(s) 1588, 6427, 6529, 6616, 7761
BbvCI CCTCAGC 2 cut(s) 3654, 5655
BcgI CGANNNNNNTGC 2 cut(s) 6680, 6714
BciVI GTATCC 3 cut(s) 3980, 5131, 5378
BclI TGATCA 4 cut(s) 1435, 2521, 5212, 5832
BcnI CCSGG 6 cut(s) 1329, 1330, 2103, 3021, 3198, 5541
BcuI ACTAGT 1 cut(s) 7141
BfmI CTRYAG 6 cut(s) 489, 684, 864, 1801, 1824, 5395
BfoI RGCGCY 1 cut(s) 7240
BfrI CTTAAG 8 cut(s) 856, 1882, 2134, 3758, 6169, 6511, 7240, 7282
BfuAI ACCTGC 1 cut(s) 3735
BfuI GTATCC 3 cut(s) 3980, 5131, 5378
BglII AGATCT 2 cut(s) 745, 6468
BlpI GCTNAGC 2 cut(s) 1895, 2408
Bme18I GGWCC 4 cut(s) 2690, 3005, 4244, 5671
BmeT110I CYCGRG 3 cut(s) 937, 1049, 1328
BmgBI CACGTC 1 cut(s) 885
BmrI ACTGGG 3 cut(s) 183, 3134, 7510
BmtI GCTAGC 1 cut(s) 362
BmuI ACTGGG 3 cut(s) 183, 3134, 7510
BoxI GACNNNNGTC 2 cut(s) 2897, 6186
BpiI GAAGAC 7 cut(s) 135, 846, 2800, 3866, 6463, 7052, 7244
BplI GAGNNNNNCTC 6 cut(s) 931, 963, 1368, 1400, 6382, 6414
BpmI CTGGAG 4 cut(s) 595, 3721, 5289, 6218
Bpu10I CCTNAGC 4 cut(s) 1830, 3654, 5426, 5655
Bpu1102I GCTNAGC 2 cut(s) 1895, 2408
Bpu14I TTCGAA 3 cut(s) 3823, 4736, 6093
BpuMI CCSGG 6 cut(s) 1329, 1330, 2103, 3021, 3198, 5541
Bsa29I ATCGAT 1 cut(s) 3344
BsaAI YACGTR 1 cut(s) 911
BsaBI GATNNNNATC 5 cut(s) 744, 1954, 2244, 2901, 3693
BsaHI GRCGYC 2 cut(s) 3676, 6039
BsaI GGTCTC 1 cut(s) 4454
BsaXI ACNNNNNCTCC 6 cut(s) 2671, 2701, 3627, 3657, 6555, 6585
Bsc4I CCNNNNNNNGG 8 cut(s) 98, 4000, 4997, 5656, 7079, 7501, 7599, 7690
Bse118I RCCGGY 1 cut(s) 7153
Bse21I CCTNAGG 1 cut(s) 3234
Bse3DI GCAATG 4 cut(s) 1225, 5050, 5633, 5936
Bse8I GATNNNNATC 5 cut(s) 744, 1954, 2244, 2901, 3693
BseCI ATCGAT 1 cut(s) 3344
BseJI GATNNNNATC 5 cut(s) 744, 1954, 2244, 2901, 3693
BseLI CCNNNNNNNGG 8 cut(s) 98, 4000, 4997, 5656, 7079, 7501, 7599, 7690
BseMI GCAATG 4 cut(s) 1225, 5050, 5633, 5936
BseRI GAGGAG 1 cut(s) 65
BseSI GKGCMC 3 cut(s) 930, 1563, 6616
BseYI CCCAGC 1 cut(s) 395
BsgI GTGCAG 6 cut(s) 3512, 4968, 4971, 4998, 5306, 7173
BshNI GGYRCC 5 cut(s) 1701, 2396, 4289, 5536, 6866
BshVI ATCGAT 1 cut(s) 3344
BsiHKAI GWGCWC 5 cut(s) 1588, 6427, 6529, 6616, 7761
BsiHKCI CYCGRG 3 cut(s) 937, 1049, 1328
BsiSI CCGG 6 cut(s) 1329, 2102, 3021, 3197, 5541, 7154
BslFI GGGAC 8 cut(s) 1623, 2118, 5095, 5362, 5513, 6652, 7062, 7242
BslI CCNNNNNNNGG 8 cut(s) 98, 4000, 4997, 5656, 7079, 7501, 7599, 7690
BsmBI CGTCTC 1 cut(s) 5528
BsmFI GGGAC 8 cut(s) 1623, 2118, 5095, 5362, 5513, 6652, 7062, 7242
BsmI GAATGC 5 cut(s) 157, 1020, 1421, 2550, 5296
Bso31I GGTCTC 1 cut(s) 4454
BsoBI CYCGRG 3 cut(s) 937, 1049, 1328
Bsp119I TTCGAA 3 cut(s) 3823, 4736, 6093
Bsp120I GGGCCC 1 cut(s) 926
Bsp1286I GDGCHC 8 cut(s) 930, 1563, 1588, 6427, 6529, 6616, 6836, 7761
Bsp1407I TGTACA 2 cut(s) 4388, 5893
Bsp1720I GCTNAGC 2 cut(s) 1895, 2408
Bsp19I CCATGG 4 cut(s) 5335, 5529, 6428, 6759
BspACI CCGC 6 cut(s) 2312, 2693, 5242, 6558, 7600, 7709
BspDI ATCGAT 1 cut(s) 3344
BspHI TCATGA 6 cut(s) 568, 772, 1545, 3904, 4615, 6712
BspMAI CTGCAG 3 cut(s) 688, 868, 1805
BspMI ACCTGC 1 cut(s) 3735
BspOI GCTAGC 1 cut(s) 362
BspT104I TTCGAA 3 cut(s) 3823, 4736, 6093
BspT107I GGYRCC 5 cut(s) 1701, 2396, 4289, 5536, 6866
BspTI CTTAAG 8 cut(s) 856, 1882, 2134, 3758, 6169, 6511, 7240, 7282
BspTNI GGTCTC 1 cut(s) 4454
BsrDI GCAATG 4 cut(s) 1225, 5050, 5633, 5936
BsrFI RCCGGY 1 cut(s) 7153
BsrGI TGTACA 2 cut(s) 4388, 5893
BssAI RCCGGY 1 cut(s) 7153
BssNAI GTATAC 1 cut(s) 3121
BssNI GRCGYC 2 cut(s) 3676, 6039
BssT1I CCWWGG 7 cut(s) 532, 2831, 5335, 5529, 6428, 6759, 7256
Bst1107I GTATAC 1 cut(s) 3121
Bst6I CTCTTC 2 cut(s) 1801, 4307
BstACI GRCGYC 2 cut(s) 3676, 6039
BstAFI CTTAAG 8 cut(s) 856, 1882, 2134, 3758, 6169, 6511, 7240, 7282
BstAPI GCANNNNNTGC 3 cut(s) 4985, 4994, 5049
BstAUI TGTACA 2 cut(s) 4388, 5893
BstBAI YACGTR 1 cut(s) 911
BstBI TTCGAA 3 cut(s) 3823, 4736, 6093
BstDSI CCRYGG 6 cut(s) 4260, 5335, 5529, 6428, 6530, 6759
BstEII GGTNACC 1 cut(s) 2771
BstENI CCTNNNNNAGG 1 cut(s) 3998
BstH2I RGCGCY 1 cut(s) 7240
BstHHI GCGC 4 cut(s) 2920, 6294, 6937, 7239
BstMWI GCNNNNNNNGC 9 cut(s) 3286, 3562, 4985, 4994, 5049, 5660, 5923, 7154, 7609
BstNSI RCATGY 9 cut(s) 479, 1031, 2501, 4364, 4776, 4780, 5052, 5392, 7544
BstPAI GACNNNNGTC 2 cut(s) 2897, 6186
BstPI GGTNACC 1 cut(s) 2771
BstSFI CTRYAG 6 cut(s) 489, 684, 864, 1801, 1824, 5395
BstSLI GKGCMC 3 cut(s) 930, 1563, 6616
BstV2I GAAGAC 7 cut(s) 135, 846, 2800, 3866, 6463, 7052, 7244
BstX2I RGATCY 8 cut(s) 60, 745, 3370, 3607, 4110, 6280, 6468, 6678
BstXI CCANNNNNNTGG 1 cut(s) 3896
BstYI RGATCY 8 cut(s) 60, 745, 3370, 3607, 4110, 6280, 6468, 6678
BstZ17I GTATAC 1 cut(s) 3121
Bsu15I ATCGAT 1 cut(s) 3344
Bsu36I CCTNAGG 1 cut(s) 3234
BsuI GTATCC 3 cut(s) 3980, 5131, 5378
BsuTUI ATCGAT 1 cut(s) 3344
BtgI CCRYGG 6 cut(s) 4260, 5335, 5529, 6428, 6530, 6759
BtrI CACGTC 1 cut(s) 885
BtsI GCAGTG 4 cut(s) 196, 310, 1426, 3635
BveI ACCTGC 1 cut(s) 3735
CaiI CAGNNNCTG 3 cut(s) 692, 4985, 6812
CciI TCATGA 6 cut(s) 568, 772, 1545, 3904, 4615, 6712
CfoI GCGC 4 cut(s) 2920, 6294, 6937, 7239
Cfr10I RCCGGY 1 cut(s) 7153
Cfr9I CCCGGG 1 cut(s) 1328
ClaI ATCGAT 1 cut(s) 3344
CseI GACGC 2 cut(s) 3665, 6047
CsiI ACCWGGT 1 cut(s) 1927
DraI TTTAAA 3 cut(s) 957, 2632, 3039
DraIII CACNNNGTG 1 cut(s) 4907
DrdI GACNNNNNNGTC 2 cut(s) 1493, 7056
DseDI GACNNNNNNGTC 2 cut(s) 1493, 7056
EaeI YGGCCR 2 cut(s) 896, 6019
Eam1104I CTCTTC 2 cut(s) 1801, 4307
EarI CTCTTC 2 cut(s) 1801, 4307
Ecl136II GAGCTC 1 cut(s) 6425
Eco130I CCWWGG 7 cut(s) 532, 2831, 5335, 5529, 6428, 6759, 7256
Eco147I AGGCCT 1 cut(s) 7261
Eco24I GRGCYC 3 cut(s) 930, 6427, 6836
Eco31I GGTCTC 1 cut(s) 4454
Eco32I GATATC 4 cut(s) 25, 307, 3348, 5089
Eco47I GGWCC 4 cut(s) 2690, 3005, 4244, 5671
Eco47III AGCGCT 1 cut(s) 7238
Eco53kI GAGCTC 1 cut(s) 6425
Eco57I CTGAAG 7 cut(s) 858, 1000, 1232, 1673, 2610, 4415, 7302
Eco81I CCTNAGG 1 cut(s) 3234
Eco88I CYCGRG 3 cut(s) 937, 1049, 1328
Eco91I GGTNACC 1 cut(s) 2771
EcoICRI GAGCTC 1 cut(s) 6425
EcoNI CCTNNNNNAGG 1 cut(s) 3998
EcoO109I RGGNCCY 4 cut(s) 926, 927, 2597, 5671
EcoO65I GGTNACC 1 cut(s) 2771
EcoRI GAATTC 1 cut(s) 6618
EcoRV GATATC 4 cut(s) 25, 307, 3348, 5089
EcoT14I CCWWGG 7 cut(s) 532, 2831, 5335, 5529, 6428, 6759, 7256
EcoT22I ATGCAT 4 cut(s) 788, 4282, 4778, 5050
EcoT38I GRGCYC 3 cut(s) 930, 6427, 6836
ErhI CCWWGG 7 cut(s) 532, 2831, 5335, 5529, 6428, 6759, 7256
Esp3I CGTCTC 1 cut(s) 5528
FaqI GGGAC 8 cut(s) 1623, 2118, 5095, 5362, 5513, 6652, 7062, 7242
FauNDI CATATG 6 cut(s) 322, 3064, 4116, 4252, 4410, 4495
FbaI TGATCA 4 cut(s) 1435, 2521, 5212, 5832
FblI GTMKAC 3 cut(s) 1455, 3120, 6894
FriOI GRGCYC 3 cut(s) 930, 6427, 6836
FspI TGCGCA 2 cut(s) 2919, 6936
GlaI GCGC 4 cut(s) 2919, 6293, 6936, 7238
GsaI CCCAGC 1 cut(s) 399
GsuI CTGGAG 4 cut(s) 595, 3721, 5289, 6218
HaeII RGCGCY 1 cut(s) 7240
HapII CCGG 6 cut(s) 1329, 2102, 3021, 3197, 5541, 7154
HgaI GACGC 2 cut(s) 3665, 6047
HhaI GCGC 4 cut(s) 2920, 6294, 6937, 7239
Hin1I GRCGYC 2 cut(s) 3676, 6039
Hin6I GCGC 4 cut(s) 2918, 6292, 6935, 7237
HinP1I GCGC 4 cut(s) 2918, 6292, 6935, 7237
HincII GTYRAC 3 cut(s) 1568, 2892, 4722
HindII GTYRAC 3 cut(s) 1568, 2892, 4722
HindIII AAGCTT 2 cut(s) 5915, 6514
HpaII CCGG 6 cut(s) 1329, 2102, 3021, 3197, 5541, 7154
Hpy99I CGWCG 1 cut(s) 3128
HpyCH4IV ACGT 6 cut(s) 166, 884, 910, 960, 1488, 3126
HpyF10VI GCNNNNNNNGC 9 cut(s) 3286, 3562, 4985, 4994, 5049, 5660, 5923, 7154, 7609
HpySE526I ACGT 6 cut(s) 166, 884, 910, 960, 1488, 3126
Hsp92I GRCGYC 2 cut(s) 3676, 6039
HspAI GCGC 4 cut(s) 2918, 6292, 6935, 7237
KpnI GGTACC 2 cut(s) 2400, 5540
Ksp22I TGATCA 4 cut(s) 1435, 2521, 5212, 5832
MabI ACCWGGT 1 cut(s) 1927
MaeII ACGT 6 cut(s) 166, 884, 910, 960, 1488, 3126
MfeI CAATTG 5 cut(s) 5463, 5802, 6015, 6408, 6417
MflI RGATCY 8 cut(s) 60, 745, 3370, 3607, 4110, 6280, 6468, 6678
MhlI GDGCHC 8 cut(s) 930, 1563, 1588, 6427, 6529, 6616, 6836, 7761
MlsI TGGCCA 2 cut(s) 898, 6021
MluNI TGGCCA 2 cut(s) 898, 6021
MmeI TCCRAC 9 cut(s) 648, 3664, 3730, 4254, 5747, 6258, 7291, 7555, 7628
Mox20I TGGCCA 2 cut(s) 898, 6021
Mph1103I ATGCAT 4 cut(s) 788, 4282, 4778, 5050
MroXI GAANNNNTTC 7 cut(s) 799, 1661, 2650, 3944, 4510, 4569, 7582
MscI TGGCCA 2 cut(s) 898, 6021
MslI CAYNNNNRTG 4 cut(s) 771, 892, 2529, 4479
Msp20I TGGCCA 2 cut(s) 898, 6021
MspA1I CMGCKG 3 cut(s) 2695, 4136, 6634
MspCI CTTAAG 8 cut(s) 856, 1882, 2134, 3758, 6169, 6511, 7240, 7282
MspI CCGG 6 cut(s) 1329, 2102, 3021, 3197, 5541, 7154
MunI CAATTG 5 cut(s) 5463, 5802, 6015, 6408, 6417
Mva1269I GAATGC 5 cut(s) 157, 1020, 1421, 2550, 5296
MwoI GCNNNNNNNGC 9 cut(s) 3286, 3562, 4985, 4994, 5049, 5660, 5923, 7154, 7609
NciI CCSGG 6 cut(s) 1329, 1330, 2103, 3021, 3198, 5541
NcoI CCATGG 4 cut(s) 5335, 5529, 6428, 6759
NdeI CATATG 6 cut(s) 322, 3064, 4116, 4252, 4410, 4495
NheI GCTAGC 1 cut(s) 358
NmeAIII GCCGAG 1 cut(s) 6679
NmuCI GTSAC 5 cut(s) 1120, 2737, 2771, 4006, 5708
NsbI TGCGCA 2 cut(s) 2919, 6936
NsiI ATGCAT 4 cut(s) 788, 4282, 4778, 5050
NspI RCATGY 9 cut(s) 479, 1031, 2501, 4364, 4776, 4780, 5052, 5392, 7544
NspV TTCGAA 3 cut(s) 3823, 4736, 6093
PaeI GCATGC 3 cut(s) 479, 4776, 5052
PagI TCATGA 6 cut(s) 568, 772, 1545, 3904, 4615, 6712
PceI AGGCCT 1 cut(s) 7261
PcsI WCGNNNNNNNCGW 1 cut(s) 7642
PctI GAATGC 5 cut(s) 157, 1020, 1421, 2550, 5296
PdmI GAANNNNTTC 7 cut(s) 799, 1661, 2650, 3944, 4510, 4569, 7582
PflFI GACNNNGTC 1 cut(s) 2282
PflMI CCANNNNNTGG 1 cut(s) 4997
PfoI TCCNGGA 3 cut(s) 2101, 3019, 5305
Ppu21I YACGTR 1 cut(s) 911
PpuMI RGGWCCY 1 cut(s) 5671
PshAI GACNNNNGTC 2 cut(s) 2897, 6186
PshBI ATTAAT 2 cut(s) 3249, 3509
PsiI TTATAA 4 cut(s) 1625, 3714, 5070, 6003
Psp124BI GAGCTC 1 cut(s) 6427
Psp5II RGGWCCY 1 cut(s) 5671
PspEI GGTNACC 1 cut(s) 2771
PspFI CCCAGC 1 cut(s) 395
PspOMI GGGCCC 1 cut(s) 926
PspPPI RGGWCCY 1 cut(s) 5671
PstI CTGCAG 3 cut(s) 688, 868, 1805
PstNI CAGNNNCTG 3 cut(s) 692, 4985, 6812
PsuI RGATCY 8 cut(s) 60, 745, 3370, 3607, 4110, 6280, 6468, 6678
PsyI GACNNNGTC 1 cut(s) 2282
PvuII CAGCTG 2 cut(s) 4136, 6634
RseI CAYNNNNRTG 4 cut(s) 771, 892, 2529, 4479
SacI GAGCTC 1 cut(s) 6427
SduI GDGCHC 8 cut(s) 930, 1563, 1588, 6427, 6529, 6616, 6836, 7761
SexAI ACCWGGT 1 cut(s) 1927
SfcI CTRYAG 6 cut(s) 489, 684, 864, 1801, 1824, 5395
SfuI TTCGAA 3 cut(s) 3823, 4736, 6093
SinI GGWCC 4 cut(s) 2690, 3005, 4244, 5671
SmaI CCCGGG 1 cut(s) 1330
SmiMI CAYNNNNRTG 4 cut(s) 771, 892, 2529, 4479
SpeI ACTAGT 1 cut(s) 7141
SphI GCATGC 3 cut(s) 479, 4776, 5052
SseBI AGGCCT 1 cut(s) 7261
SsiI CCGC 6 cut(s) 2312, 2693, 5242, 6558, 7600, 7709
SspI AATATT 5 cut(s) 584, 647, 2176, 4569, 5839
SstI GAGCTC 1 cut(s) 6427
StuI AGGCCT 1 cut(s) 7261
StyI CCWWGG 7 cut(s) 532, 2831, 5335, 5529, 6428, 6759, 7256
TaiI ACGT 6 cut(s) 169, 887, 913, 963, 1491, 3129
TatI WGTACW 7 cut(s) 1193, 3088, 3315, 3519, 4388, 5586, 5893
TauI GCSGC 1 cut(s) 7603
TseFI GTSAC 5 cut(s) 1120, 2737, 2771, 4006, 5708
Tsp45I GTSAC 5 cut(s) 1120, 2737, 2771, 4006, 5708
TspGWI ACGGA 5 cut(s) 4502, 5156, 6519, 7238, 7511
TspMI CCCGGG 1 cut(s) 1328
Tth111I GACNNNGTC 1 cut(s) 2282
Van91I CCANNNNNTGG 1 cut(s) 4997
Vha464I CTTAAG 8 cut(s) 856, 1882, 2134, 3758, 6169, 6511, 7240, 7282
VneI GTGCAC 1 cut(s) 6612
VpaK11BI GGWCC 4 cut(s) 2690, 3005, 4244, 5671
VspI ATTAAT 2 cut(s) 3249, 3509
XagI CCTNNNNNAGG 1 cut(s) 3998
XceI RCATGY 9 cut(s) 479, 1031, 2501, 4364, 4776, 4780, 5052, 5392, 7544
XcmI CCANNNNNNNNNTGG 4 cut(s) 2564, 4872, 5152, 5342
XmaI CCCGGG 1 cut(s) 1328
XmiI GTMKAC 3 cut(s) 1455, 3120, 6894
XmnI GAANNNNTTC 7 cut(s) 799, 1661, 2650, 3944, 4510, 4569, 7582
Zsp2I ATGCAT 4 cut(s) 788, 4282, 4778, 5050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.