Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63320 AT5G63320 AT5G63320 |
| fragaria_vesca | FvH4_2g09340 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g07690 FvH4_5g15310 FvH4_7g03961 |
| malus_domestica | MD06G1147900.v1.1 MD14G1162200.v1.1 |
| prunus_persica | Prupe.5G154800_v2.0.a1 |
| pyrus_communis | pycom06g13720 pycom06g13730 pycom14g13510 pycom72g00010 |
| rosa_chinensis | RchiOBHm_Chr7g0190781 |
| rosa_laevigata | RLG00000004496 RLG00000004499 |
| rosa_multiflora | Rmu_co8422347.1_g000001 Rmu_sc0002819.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00264320 |
| rosa_rugosa | Rorug06G0506700 Rorug06G0506700 Rorug06G0506700 Rorug06G0506800 |
| rosa_samantha | Rh7AG113500 Rh7BG116000 Rh7CG118600 Rh7DG117500 |
| rosa_wichuraiana | Rw7G009910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 4, 268 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 464, 1276 |
| AccI | GTMKAC | 1 cut(s) | 180 |
| AccII | CGCG | 2 cut(s) | 79, 177 |
| AciI | CCGC | 4 cut(s) | 79, 483, 643, 814 |
| AcoI | YGGCCR | 1 cut(s) | 873 |
| AcsI | RAATTY | 2 cut(s) | 23, 769 |
| AcuI | CTGAAG | 1 cut(s) | 350 |
| AfaI | GTAC | 5 cut(s) | 86, 357, 405, 782, 1033 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 464, 1276 |
| AflIII | ACRYGT | 1 cut(s) | 175 |
| AgsI | TTSAA | 7 cut(s) | 241, 350, 603, 703, 769, 963, 1307 |
| AjiI | CACGTC | 1 cut(s) | 691 |
| AjnI | CCWGG | 3 cut(s) | 520, 850, 931 |
| AluBI | AGCT | 5 cut(s) | 168, 197, 928, 1114, 1258 |
| AluI | AGCT | 5 cut(s) | 168, 197, 928, 1114, 1258 |
| Alw26I | GTCTC | 2 cut(s) | 131, 872 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1114 |
| AoxI | GGCC | 3 cut(s) | 215, 578, 873 |
| ApeKI | GCWGC | 2 cut(s) | 334, 803 |
| ApoI | RAATTY | 2 cut(s) | 23, 769 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 963, 995 |
| AspLEI | GCGC | 1 cut(s) | 496 |
| AspS9I | GGNCC | 2 cut(s) | 215, 560 |
| AsuHPI | GGTGA | 1 cut(s) | 706 |
| AvaII | GGWCC | 1 cut(s) | 560 |
| BaeGI | GKGCMC | 1 cut(s) | 752 |
| BanI | GGYRCC | 2 cut(s) | 4, 268 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 348, 380 |
| BbvI | GCAGC | 2 cut(s) | 321, 790 |
| BccI | CCATC | 9 cut(s) | 61, 242, 251, 421, 434, 458, 580, 900, 1278 |
| BceAI | ACGGC | 1 cut(s) | 271 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1202, 1236 |
| BciT130I | CCWGG | 3 cut(s) | 522, 852, 933 |
| BcoDI | GTCTC | 2 cut(s) | 131, 872 |
| BfaI | CTAG | 1 cut(s) | 417 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 577 |
| BisI | GCNGC | 3 cut(s) | 335, 804, 815 |
| BlsI | GCNGC | 3 cut(s) | 336, 805, 816 |
| BmcAI | AGTACT | 1 cut(s) | 86 |
| Bme1390I | CCNGG | 3 cut(s) | 522, 852, 933 |
| Bme18I | GGWCC | 1 cut(s) | 560 |
| BmgBI | CACGTC | 1 cut(s) | 691 |
| BmgT120I | GGNCC | 2 cut(s) | 215, 560 |
| BmiI | GGNNCC | 7 cut(s) | 6, 270, 516, 561, 570, 588, 1323 |
| BmrFI | CCNGG | 3 cut(s) | 522, 852, 933 |
| BmsI | GCATC | 3 cut(s) | 742, 1083, 1210 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 499, 531 |
| BpmI | CTGGAG | 1 cut(s) | 573 |
| Bpu10I | CCTNAGC | 1 cut(s) | 169 |
| BpuEI | CTTGAG | 1 cut(s) | 483 |
| BsaBI | GATNNNNATC | 3 cut(s) | 468, 1208, 1269 |
| BsaI | GGTCTC | 2 cut(s) | 131, 872 |
| BsaJI | CCNNGG | 3 cut(s) | 141, 521, 1325 |
| BsaWI | WCCGGW | 1 cut(s) | 104 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 421, 451, 1313 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 464, 1276 |
| Bse118I | RCCGGY | 2 cut(s) | 123, 973 |
| Bse1I | ACTGG | 3 cut(s) | 34, 393, 683 |
| Bse8I | GATNNNNATC | 3 cut(s) | 468, 1208, 1269 |
| BseBI | CCWGG | 3 cut(s) | 522, 852, 933 |
| BseDI | CCNNGG | 3 cut(s) | 141, 521, 1325 |
| BseGI | GGATG | 7 cut(s) | 253, 303, 479, 733, 1123, 1204, 1270 |
| BseJI | GATNNNNATC | 3 cut(s) | 468, 1208, 1269 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 464, 1276 |
| BseMII | CTCAG | 3 cut(s) | 183, 898, 1121 |
| BseNI | ACTGG | 3 cut(s) | 34, 393, 683 |
| BseRI | GAGGAG | 2 cut(s) | 507, 1103 |
| BseSI | GKGCMC | 1 cut(s) | 752 |
| BseXI | GCAGC | 2 cut(s) | 321, 790 |
| BseYI | CCCAGC | 1 cut(s) | 1126 |
| Bsh1236I | CGCG | 2 cut(s) | 79, 177 |
| BshFI | GGCC | 3 cut(s) | 217, 580, 875 |
| BshNI | GGYRCC | 2 cut(s) | 4, 268 |
| BsiSI | CCGG | 3 cut(s) | 105, 124, 974 |
| BslFI | GGGAC | 1 cut(s) | 573 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 464, 1276 |
| BsmAI | GTCTC | 2 cut(s) | 131, 872 |
| BsmFI | GGGAC | 1 cut(s) | 573 |
| BsnI | GGCC | 3 cut(s) | 217, 580, 875 |
| Bso31I | GGTCTC | 2 cut(s) | 131, 872 |
| Bsp1286I | GDGCHC | 1 cut(s) | 752 |
| Bsp143I | GATC | 1 cut(s) | 1209 |
| BspACI | CCGC | 4 cut(s) | 79, 483, 643, 814 |
| BspANI | GGCC | 3 cut(s) | 217, 580, 875 |
| BspCNI | CTCAG | 3 cut(s) | 182, 897, 1120 |
| BspFNI | CGCG | 2 cut(s) | 79, 177 |
| BspLI | GGNNCC | 7 cut(s) | 6, 270, 516, 561, 570, 588, 1323 |
| BspQI | GCTCTTC | 1 cut(s) | 752 |
| BspT107I | GGYRCC | 2 cut(s) | 4, 268 |
| BspTNI | GGTCTC | 2 cut(s) | 131, 872 |
| BsrFI | RCCGGY | 2 cut(s) | 123, 973 |
| BsrI | ACTGG | 3 cut(s) | 34, 393, 683 |
| BssAI | RCCGGY | 2 cut(s) | 123, 973 |
| BssECI | CCNNGG | 3 cut(s) | 141, 521, 1325 |
| BssMI | GATC | 1 cut(s) | 1209 |
| BssT1I | CCWWGG | 2 cut(s) | 141, 1325 |
| Bst2UI | CCWGG | 3 cut(s) | 522, 852, 933 |
| Bst4CI | ACNGT | 5 cut(s) | 13, 724, 754, 943, 1084 |
| Bst6I | CTCTTC | 3 cut(s) | 365, 752, 790 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 283, 491, 955 |
| BstC8I | GCNNGC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 4 cut(s) | 169, 884, 1107, 1226 |
| BstF5I | GGATG | 7 cut(s) | 253, 303, 479, 733, 1123, 1204, 1270 |
| BstFNI | CGCG | 2 cut(s) | 79, 177 |
| BstHHI | GCGC | 1 cut(s) | 496 |
| BstKTI | GATC | 1 cut(s) | 1212 |
| BstMAI | GTCTC | 2 cut(s) | 131, 872 |
| BstMBI | GATC | 1 cut(s) | 1209 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 174, 283, 491, 577, 955, 974 |
| BstNI | CCWGG | 3 cut(s) | 522, 852, 933 |
| BstNSI | RCATGY | 3 cut(s) | 131, 556, 781 |
| BstSCI | CCNGG | 3 cut(s) | 520, 850, 931 |
| BstSLI | GKGCMC | 1 cut(s) | 752 |
| BstUI | CGCG | 2 cut(s) | 79, 177 |
| BstV1I | GCAGC | 2 cut(s) | 321, 790 |
| BsuRI | GGCC | 3 cut(s) | 217, 580, 875 |
| BtrI | CACGTC | 1 cut(s) | 691 |
| BtsCI | GGATG | 7 cut(s) | 253, 303, 479, 733, 1123, 1204, 1270 |
| BtsI | GCAGTG | 1 cut(s) | 442 |
| BtsIMutI | CAGTG | 4 cut(s) | 27, 400, 442, 750 |
| Cac8I | GCNNGC | 1 cut(s) | 129 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1114 |
| CfoI | GCGC | 1 cut(s) | 496 |
| Cfr10I | RCCGGY | 2 cut(s) | 123, 973 |
| Cfr13I | GGNCC | 2 cut(s) | 215, 560 |
| CseI | GACGC | 1 cut(s) | 183 |
| Csp6I | GTAC | 5 cut(s) | 85, 356, 404, 781, 1032 |
| CviAII | CATG | 4 cut(s) | 128, 210, 553, 778 |
| CviQI | GTAC | 5 cut(s) | 85, 356, 404, 781, 1032 |
| DdeI | CTNAG | 4 cut(s) | 169, 884, 1107, 1226 |
| DpnI | GATC | 1 cut(s) | 1211 |
| DpnII | GATC | 1 cut(s) | 1209 |
| DraI | TTTAAA | 1 cut(s) | 1069 |
| EaeI | YGGCCR | 1 cut(s) | 873 |
| Eam1104I | CTCTTC | 3 cut(s) | 365, 752, 790 |
| EarI | CTCTTC | 3 cut(s) | 365, 752, 790 |
| Eco130I | CCWWGG | 2 cut(s) | 141, 1325 |
| Eco31I | GGTCTC | 2 cut(s) | 131, 872 |
| Eco32I | GATATC | 1 cut(s) | 470 |
| Eco47I | GGWCC | 1 cut(s) | 560 |
| Eco57I | CTGAAG | 1 cut(s) | 350 |
| EcoO109I | RGGNCCY | 1 cut(s) | 560 |
| EcoRI | GAATTC | 2 cut(s) | 23, 769 |
| EcoRII | CCWGG | 3 cut(s) | 520, 850, 931 |
| EcoRV | GATATC | 1 cut(s) | 470 |
| EcoT14I | CCWWGG | 2 cut(s) | 141, 1325 |
| EcoT22I | ATGCAT | 1 cut(s) | 1076 |
| ErhI | CCWWGG | 2 cut(s) | 141, 1325 |
| FaeI | CATG | 4 cut(s) | 131, 213, 556, 781 |
| FaqI | GGGAC | 1 cut(s) | 573 |
| FatI | CATG | 4 cut(s) | 127, 209, 552, 777 |
| FauI | CCCGC | 1 cut(s) | 650 |
| FblI | GTMKAC | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 3 cut(s) | 335, 804, 815 |
| FokI | GGATG | 7 cut(s) | 260, 310, 466, 720, 1130, 1211, 1277 |
| Fsp4HI | GCNGC | 3 cut(s) | 335, 804, 815 |
| FspBI | CTAG | 1 cut(s) | 417 |
| GlaI | GCGC | 1 cut(s) | 495 |
| GluI | GCNGC | 3 cut(s) | 335, 804, 815 |
| GsaI | CCCAGC | 1 cut(s) | 1130 |
| GsuI | CTGGAG | 1 cut(s) | 573 |
| HaeIII | GGCC | 3 cut(s) | 217, 580, 875 |
| HapII | CCGG | 3 cut(s) | 105, 124, 974 |
| HgaI | GACGC | 1 cut(s) | 183 |
| HhaI | GCGC | 1 cut(s) | 496 |
| Hin1II | CATG | 4 cut(s) | 131, 213, 556, 781 |
| Hin6I | GCGC | 1 cut(s) | 494 |
| HinP1I | GCGC | 1 cut(s) | 494 |
| HincII | GTYRAC | 1 cut(s) | 688 |
| HindII | GTYRAC | 1 cut(s) | 688 |
| HindIII | AAGCTT | 2 cut(s) | 926, 1256 |
| HinfI | GANTC | 4 cut(s) | 149, 206, 679, 1061 |
| HpaII | CCGG | 3 cut(s) | 105, 124, 974 |
| HphI | GGTGA | 1 cut(s) | 706 |
| Hpy166II | GTNNAC | 3 cut(s) | 181, 688, 1034 |
| Hpy188I | TCNGA | 6 cut(s) | 154, 202, 310, 369, 429, 1060 |
| Hpy188III | TCNNGA | 7 cut(s) | 116, 171, 558, 963, 983, 1078, 1109 |
| Hpy8I | GTNNAC | 3 cut(s) | 181, 688, 1034 |
| HpyAV | CCTTC | 5 cut(s) | 31, 310, 969, 1087, 1175 |
| HpyCH4III | ACNGT | 5 cut(s) | 13, 724, 754, 943, 1084 |
| HpyCH4IV | ACGT | 1 cut(s) | 690 |
| HpyCH4V | TGCA | 5 cut(s) | 277, 337, 435, 949, 1074 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 174, 283, 491, 577, 955, 974 |
| HpyF3I | CTNAG | 4 cut(s) | 169, 884, 1107, 1226 |
| HpySE526I | ACGT | 1 cut(s) | 690 |
| Hsp92II | CATG | 4 cut(s) | 131, 213, 556, 781 |
| HspAI | GCGC | 1 cut(s) | 494 |
| Kzo9I | GATC | 1 cut(s) | 1209 |
| LguI | GCTCTTC | 1 cut(s) | 752 |
| LmnI | GCTCC | 5 cut(s) | 520, 568, 592, 1111, 1321 |
| Lsp1109I | GCAGC | 2 cut(s) | 321, 790 |
| LweI | GCATC | 3 cut(s) | 742, 1083, 1210 |
| MaeI | CTAG | 1 cut(s) | 417 |
| MaeII | ACGT | 1 cut(s) | 690 |
| MaeIII | GTNAC | 1 cut(s) | 291 |
| MalI | GATC | 1 cut(s) | 1211 |
| MboI | GATC | 1 cut(s) | 1209 |
| MboII | GAAGA | 7 cut(s) | 356, 382, 769, 777, 934, 998, 1036 |
| MfeI | CAATTG | 2 cut(s) | 338, 632 |
| MhlI | GDGCHC | 1 cut(s) | 752 |
| MluCI | AATT | 9 cut(s) | 23, 338, 375, 598, 632, 648, 769, 1133, 1153 |
| MluI | ACGCGT | 1 cut(s) | 175 |
| Mph1103I | ATGCAT | 1 cut(s) | 1076 |
| MseI | TTAA | 6 cut(s) | 647, 651, 729, 1068, 1098, 1152 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| MspI | CCGG | 3 cut(s) | 105, 124, 974 |
| MspR9I | CCNGG | 3 cut(s) | 522, 852, 933 |
| MunI | CAATTG | 2 cut(s) | 338, 632 |
| MvaI | CCWGG | 3 cut(s) | 522, 852, 933 |
| MvnI | CGCG | 2 cut(s) | 79, 177 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 174, 283, 491, 577, 955, 974 |
| NdeII | GATC | 1 cut(s) | 1209 |
| NlaIII | CATG | 4 cut(s) | 131, 213, 556, 781 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 270, 516, 561, 570, 588, 1323 |
| NmeAIII | GCCGAG | 1 cut(s) | 901 |
| NmuCI | GTSAC | 1 cut(s) | 291 |
| NsiI | ATGCAT | 1 cut(s) | 1076 |
| NspI | RCATGY | 3 cut(s) | 131, 556, 781 |
| PacI | TTAATTAA | 1 cut(s) | 651 |
| PaeI | GCATGC | 1 cut(s) | 131 |
| PciSI | GCTCTTC | 1 cut(s) | 752 |
| PfeI | GAWTC | 4 cut(s) | 149, 206, 679, 1061 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 464, 1276 |
| PfoI | TCCNGGA | 1 cut(s) | 931 |
| PkrI | GCNGC | 3 cut(s) | 336, 805, 816 |
| PpuMI | RGGWCCY | 1 cut(s) | 560 |
| Psp5II | RGGWCCY | 1 cut(s) | 560 |
| Psp6I | CCWGG | 3 cut(s) | 520, 850, 931 |
| PspFI | CCCAGC | 1 cut(s) | 1126 |
| PspGI | CCWGG | 3 cut(s) | 520, 850, 931 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 270, 516, 561, 570, 588, 1323 |
| PspPI | GGNCC | 2 cut(s) | 215, 560 |
| PspPPI | RGGWCCY | 1 cut(s) | 560 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1114 |
| RsaI | GTAC | 5 cut(s) | 86, 357, 405, 782, 1033 |
| RsaNI | GTAC | 5 cut(s) | 85, 356, 404, 781, 1032 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SapI | GCTCTTC | 1 cut(s) | 752 |
| SaqAI | TTAA | 6 cut(s) | 647, 651, 729, 1068, 1098, 1152 |
| SatI | GCNGC | 3 cut(s) | 335, 804, 815 |
| Sau3AI | GATC | 1 cut(s) | 1209 |
| Sau96I | GGNCC | 2 cut(s) | 215, 560 |
| ScaI | AGTACT | 1 cut(s) | 86 |
| ScrFI | CCNGG | 3 cut(s) | 522, 852, 933 |
| SduI | GDGCHC | 1 cut(s) | 752 |
| SfaNI | GCATC | 3 cut(s) | 742, 1083, 1210 |
| SinI | GGWCC | 1 cut(s) | 560 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| SmlI | CTYRAG | 1 cut(s) | 498 |
| SmoI | CTYRAG | 1 cut(s) | 498 |
| SphI | GCATGC | 1 cut(s) | 131 |
| Sse9I | AATT | 9 cut(s) | 23, 338, 375, 598, 632, 648, 769, 1133, 1153 |
| SsiI | CCGC | 4 cut(s) | 79, 483, 643, 814 |
| SspI | AATATT | 2 cut(s) | 893, 1147 |
| SspMI | CTAG | 1 cut(s) | 417 |
| StyD4I | CCNGG | 3 cut(s) | 520, 850, 931 |
| StyI | CCWWGG | 2 cut(s) | 141, 1325 |
| TaaI | ACNGT | 5 cut(s) | 13, 724, 754, 943, 1084 |
| TaiI | ACGT | 1 cut(s) | 693 |
| TaqI | TCGA | 1 cut(s) | 1212 |
| TasI | AATT | 9 cut(s) | 23, 338, 375, 598, 632, 648, 769, 1133, 1153 |
| TatI | WGTACW | 4 cut(s) | 84, 403, 780, 1031 |
| TauI | GCSGC | 1 cut(s) | 817 |
| TfiI | GAWTC | 4 cut(s) | 149, 206, 679, 1061 |
| Tru1I | TTAA | 6 cut(s) | 647, 651, 729, 1068, 1098, 1152 |
| Tru9I | TTAA | 6 cut(s) | 647, 651, 729, 1068, 1098, 1152 |
| TscAI | CASTG | 4 cut(s) | 34, 400, 442, 757 |
| TseFI | GTSAC | 1 cut(s) | 291 |
| TseI | GCWGC | 2 cut(s) | 334, 803 |
| Tsp45I | GTSAC | 1 cut(s) | 291 |
| TspDTI | ATGAA | 3 cut(s) | 198, 632, 1194 |
| TspGWI | ACGGA | 2 cut(s) | 310, 1267 |
| TspRI | CASTG | 4 cut(s) | 34, 400, 442, 757 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 464, 1276 |
| VpaK11BI | GGWCC | 1 cut(s) | 560 |
| XapI | RAATTY | 2 cut(s) | 23, 769 |
| XceI | RCATGY | 3 cut(s) | 131, 556, 781 |
| XmiI | GTMKAC | 1 cut(s) | 180 |
| XspI | CTAG | 1 cut(s) | 417 |
| ZrmI | AGTACT | 1 cut(s) | 86 |
| Zsp2I | ATGCAT | 1 cut(s) | 1076 |