Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004844

Physical Location & Seq

Genomic Coordinates Reverse (-)

52352986 .. 52356863

Gene Structure 3878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGTCATCCTCTGCAAGAACTGCTGCTTCAAAATGCAAGTTACCACCTTTATCCACGAACCCAGAAAGACCCACATCTTCAAATTCCCACAGCTCAACCAAGCTTTCATCTTTCTTCACAAACCAAGCTAGTAGTAATACCGCTATACCCACTTCTTCAAATCCCAAAACTTCACCAAAAAACCCATTTCCTAGAGCTCCAATCCAAACCCCACTTGAGAAGTTCCTCCAAGCAAACTGTAAGTCAGGTAACATCACTCTCAGTGAAGCACTTGACTATTTTGACCACATGATTCATATGCGACCTCCTCCTCCAATGTCATCATTCAATCGTTTATTAGGTGGACTTGTCAAGAGTAAGCATTACTCTCATGTTTTCTCATTTTGTAATAAGTTGACAGCTTCTGGGTTATTGCCCAATTTGATTACACTTAATATTTTGGTTAACTGCCTTTGTAATATGAACCGTGTTTGTGATGGTTTTGTGGTCATGGGAAGTATGATTAGGAAGGGTTATAGACCAACTACTGTGACTTTTACATCTTTGGTTAAAGGGCTGTGTATGGAGAATAGGATTGATGAGGCAAACAAGTTGTTTGAGAAAATGATCAAGTTCAGGTGTCAGCCTAGTGTGATTTGTTATGGTACTTTGATTAATGGGTTGTGCCGAACCGGCAAGACAGATGTTGCACTTAAGTTACATGAAGAAATGAATAGTGGGAATGGTGTTAGGTTTAGGCCGAATACTGTGACTTTTACATCTTTGATCCAGGGTTTGTGTGTGGAGGATAGGATAGATGAGGCAACCAGTTTGTTTGAGAAAATGAAGAAGTTGCGGTGTCATCCTAGCGTGATTACATATGGTACTTTGATTAATGGGTTCTGCAGAACAGGCAAGACAGATGTTGCACTTAGTTTACATGAAGAAATGGCTAATGAGAATGGTGGATATGGTGTTGATTGTAAGCCGAATTCAGTTACTTACGGGATTATTATTGATCGGTTTTGTAAAGATGGGATGATAGATAAGGCAACAGAGCTTTTTCTAGAAATGAAAAATAGAGGGATTTTTCCAGATGTGGTTGTATATAGTATTCTAATACATGGTTTGTACTATAATGAAAAATGGGAAGCCGGTAAAGCTTTGTTACATGAGATGATAGATAGCGGTATCCAGCCTGATTTGGTAACATTCAATGTGTTAATAGGGGCACTTTGCAGAAGGGGAAATGTGAAAGATAGCCGTGACTTGCTAAAGTTGATGATTCGAAGAGGCATGAATCCCAATATTTTTACTTACAATACTTTGATGGATGGCTTATGTTTGGTGGGTAATCTTGATGAAGCAAGAGAGCTATTTCATTCTATCTCAACTAGGGGGTGTGAACCTGGTGCAATCAGCTACTCTGTGTTAATCAACGGTTACTGCAAGTATAGGAAGATACAGGAAGCCATCAATCTTTATGAGGAAATGATTTTCAAAGGAGTTAAGCCAACAGTAATAACATATAATGCCTTATTAACTGGTATTTTTCAGATGGGCAAAGTTCAGGATGCACAGAAACTGTTTCATGAGATGCACACTCAGAATGTGCTACCGGATTCAGCTACATATTTAATATTATTGGATGGCCTTTGCAAACATGATTGCAAACCAGAAGCAATGGATATTTTTCATTCTTTAGAAAATTCCAATTTTAGATTTAGTGTTGAAATTTTTAATTGTCTTATGGATGGGTTCTGTAAATCAGGGAAGCTTGAAATTGCTTGGGACCTATTTCACAAAATGTCAAGTAAAGGCTTGCTACCAAATGTTATAACATACTCCATAATGATTCATGGCCTCTGTATGGAAGGCCAACTGGAAAAGGCAAATGGTTTGCTCTTAGAAATGGAAGGAAAAGGTTGTCTTCCAAATGTCATCACTTACAATACCCTTATGCGGGGTTTCTGCCTAAATGATGACTCGACAAAGGTTGTTGAACTACTGCATAAGATGTCAGAAAGAAATCTGTCACCAGATGACTCTACAATCTCCATTGTCGTAGACTTGCTGTCAAAGGATGAAAGGATACGTAAATGTCTGGACTTGCTACCCACATTTCCTGCTACCAGCCAATTGAGGATGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

710

Amino Acids

79.39

Weight (kDa)

8.47

Isoelectric Point (pI)

31.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	108 - 153	9.8e-07	PPR repeat family
PPR_2	PF13041	145 - 187	1.5e-07	PPR repeat family
PPR_1	PF12854	170 - 202	6.5e-11	PPR repeat
PPR_2	PF13041	174 - 223	2.1e-14	PPR repeat family
PPR	PF01535	177 - 207	2.3e-06	PPR repeat
PPR_1	PF12854	207 - 237	2.5e-10	PPR repeat
PPR_2	PF13041	209 - 239	3.6e-06	PPR repeat family
PPR_3	PF13812	245 - 293	6e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	246 - 276	9.5e-10	PPR repeat
PPR_2	PF13041	247 - 296	3.8e-17	PPR repeat family
PPR	PF01535	250 - 280	3.2e-07	PPR repeat
PPR_1	PF12854	280 - 310	7e-11	PPR repeat
PPR_2	PF13041	282 - 313	2.6e-06	PPR repeat family
PPR	PF01535	285 - 312	3.1e-06	PPR repeat
PPR_1	PF12854	320 - 352	1e-11	PPR repeat
PPR_2	PF13041	323 - 370	4.6e-16	PPR repeat family
PPR	PF01535	326 - 356	1e-07	PPR repeat
PPR_3	PF13812	347 - 405	2.1e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	358 - 407	4.2e-13	PPR repeat family
PPR_1	PF12854	390 - 421	1.8e-08	PPR repeat
PPR_2	PF13041	393 - 441	9.7e-16	PPR repeat family
PPR	PF01535	396 - 425	2.8e-06	PPR repeat
PPR_3	PF13812	418 - 475	4.7e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	424 - 454	1.8e-11	PPR repeat
PPR_2	PF13041	428 - 477	1.1e-15	PPR repeat family
PPR	PF01535	431 - 461	1.2e-06	PPR repeat
PPR_long	PF17177	445 - 542	1e-05	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	459 - 491	3.3e-08	PPR repeat
PPR_2	PF13041	463 - 510	1.2e-14	PPR repeat family
PPR	PF01535	466 - 496	2.4e-07	PPR repeat
PPR_3	PF13812	487 - 542	1.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	494 - 526	5.5e-09	PPR repeat
PPR_2	PF13041	498 - 547	1.9e-16	PPR repeat family
PPR_long	PF17177	553 - 683	8.7e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	557 - 612	5.3e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	570 - 597	1.3e-06	PPR repeat
PPR_2	PF13041	570 - 616	6.7e-19	PPR repeat family
PPR	PF01535	572 - 601	4.4e-07	PPR repeat
PPR_3	PF13812	592 - 648	3.6e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	599 - 632	1.7e-10	PPR repeat
PPR	PF01535	606 - 636	2.9e-07	PPR repeat
PPR_2	PF13041	611 - 651	1.3e-12	PPR repeat family
PPR_1	PF12854	634 - 666	8.2e-08	PPR repeat
PPR_2	PF13041	638 - 686	2.1e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004844)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g22260
malus_domestica	MD05G1203800.v1.1
prunus_persica	Prupe.8G230100_v2.0.a1
pyrus_communis	pycom05g19020
rosa_chinensis	RchiOBHm_Chr6g0289191 RchiOBHm_Chr6g0289221
rosa_laevigata	RLG00000009132 RLG00000009134 RLG00000012320 RLG00000012323 RLG00000012325
rosa_multiflora	Rmu_co8489247.1_g000002 Rmu_sc0001527.1_g000006 Rmu_sc0001527.1_g000010 Rmu_sc0001527.1_g000011
rosa_roxburghii	Rroxscaffold_7G00179440 Rroxscaffold_7G00179500
rosa_rugosa	Rorug06G0201500 Rorug06G0201800 Rorug06G0201900 Rorug06G0202000
rosa_samantha	Rh6AG312700 Rh6AG312900 Rh6BG319700 Rh6BG320300 Rh6BG320400 Rh6CG326100 Rh6CG326400 Rh6DG312100
rosa_wichuraiana	Rw6G027020 Rw6G027040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1817
AccI	GTMKAC	1 cut(s)	2046
AciI	CCGC	4 cut(s)	141, 835, 1167, 1942
AclWI	GGATC	1 cut(s)	760
AcsI	RAATTY	4 cut(s)	82, 970, 1687, 1713
AfaI	GTAC	3 cut(s)	646, 865, 1112
AfiI	CCNNNNNNNGG	3 cut(s)	1849, 1941, 1942
AflII	CTTAAG	1 cut(s)	692
AgsI	TTSAA	9 cut(s)	30, 81, 159, 328, 1195, 1480, 1712, 1760, 1982
AhdI	GACNNNNNGTC	1 cut(s)	2053
AjnI	CCWGG	2 cut(s)	768, 1387
Alw21I	GWGCWC	1 cut(s)	199
AlwI	GGATC	1 cut(s)	760
AlwNI	CAGNNNCTG	2 cut(s)	404, 1564
AoxI	GGCC	4 cut(s)	737, 1630, 1840, 1855
ApeKI	GCWGC	1 cut(s)	23
ApoI	RAATTY	4 cut(s)	82, 970, 1687, 1713
ArsI	GACNNNNNNTTYG	2 cut(s)	227, 259
AseI	ATTAAT	2 cut(s)	654, 873
AspS9I	GGNCC	1 cut(s)	1771
AsuHPI	GGTGA	2 cut(s)	165, 2007
AsuII	TTCGAA	1 cut(s)	1267
AvaII	GGWCC	1 cut(s)	1771
BaeGI	GKGCMC	1 cut(s)	1213
BanII	GRGCYC	1 cut(s)	199
BbsI	GAAGAC	1 cut(s)	1901
Bbv12I	GWGCWC	1 cut(s)	199
BbvI	GCAGC	1 cut(s)	10
BccI	CCATC	8 cut(s)	470, 1007, 1303, 1307, 1460, 1531, 1622, 1727
BceAI	ACGGC	1 cut(s)	1227
BciT130I	CCWGG	2 cut(s)	770, 1389
BciVI	GTATCC	2 cut(s)	1181, 2064
BclI	TGATCA	1 cut(s)	606
BfaI	CTAG	6 cut(s)	129, 192, 627, 846, 1046, 1374
BfmI	CTRYAG	1 cut(s)	883
BfrI	CTTAAG	1 cut(s)	692
BfuI	GTATCC	2 cut(s)	1181, 2064
BglI	GCCNNNNNGGC	1 cut(s)	672
BisI	GCNGC	1 cut(s)	24
BlsI	GCNGC	1 cut(s)	25
Bme1390I	CCNGG	2 cut(s)	770, 1389
Bme18I	GGWCC	1 cut(s)	1771
BmeRI	GACNNNNNGTC	1 cut(s)	2053
BmgT120I	GGNCC	1 cut(s)	1771
BmiI	GGNNCC	1 cut(s)	1772
BmrFI	CCNGG	2 cut(s)	770, 1389
BmsI	GCATC	3 cut(s)	1543, 1566, 2115
BpiI	GAAGAC	1 cut(s)	1901
Bpu14I	TTCGAA	1 cut(s)	1267
BpuEI	CTTGAG	1 cut(s)	236
BsaAI	YACGTR	1 cut(s)	2075
BsaJI	CCNNGG	1 cut(s)	769
BsaWI	WCCGGW	1 cut(s)	1597
Bsc4I	CCNNNNNNNGG	3 cut(s)	1849, 1941, 1942
Bse118I	RCCGGY	2 cut(s)	671, 1133
Bse1I	ACTGG	3 cut(s)	807, 1528, 1866
Bse3DI	GCAATG	1 cut(s)	1668
BseBI	CCWGG	2 cut(s)	770, 1389
BseDI	CCNNGG	1 cut(s)	769
BseGI	GGATG	9 cut(s)	5, 841, 1023, 1318, 1558, 1633, 1738, 2068, 2130
BseLI	CCNNNNNNNGG	3 cut(s)	1849, 1941, 1942
BseMI	GCAATG	1 cut(s)	1668
BseMII	CTCAG	2 cut(s)	274, 1598
BseNI	ACTGG	3 cut(s)	807, 1528, 1866
BseRI	GAGGAG	2 cut(s)	297, 300
BseSI	GKGCMC	1 cut(s)	1213
BseXI	GCAGC	1 cut(s)	10
BshFI	GGCC	4 cut(s)	739, 1632, 1842, 1857
BsiHKAI	GWGCWC	1 cut(s)	199
BsiSI	CCGG	3 cut(s)	672, 1134, 1598
BslFI	GGGAC	1 cut(s)	1784
BslI	CCNNNNNNNGG	3 cut(s)	1849, 1941, 1942
BsmFI	GGGAC	1 cut(s)	1784
BsnI	GGCC	4 cut(s)	739, 1632, 1842, 1857
Bsp119I	TTCGAA	1 cut(s)	1267
Bsp1286I	GDGCHC	2 cut(s)	199, 1213
Bsp143I	GATC	3 cut(s)	606, 765, 997
BspACI	CCGC	4 cut(s)	141, 835, 1167, 1942
BspANI	GGCC	4 cut(s)	739, 1632, 1842, 1857
BspCNI	CTCAG	2 cut(s)	273, 1597
BspHI	TCATGA	1 cut(s)	1570
BspLI	GGNNCC	1 cut(s)	1772
BspMAI	CTGCAG	1 cut(s)	887
BspPI	GGATC	1 cut(s)	760
BspT104I	TTCGAA	1 cut(s)	1267
BspTI	CTTAAG	1 cut(s)	692
BsrDI	GCAATG	1 cut(s)	1668
BsrFI	RCCGGY	2 cut(s)	671, 1133
BsrI	ACTGG	3 cut(s)	807, 1528, 1866
BssAI	RCCGGY	2 cut(s)	671, 1133
BssECI	CCNNGG	1 cut(s)	769
BssMI	GATC	3 cut(s)	606, 765, 997
Bst2UI	CCWGG	2 cut(s)	770, 1389
Bst4CI	ACNGT	7 cut(s)	239, 467, 529, 748, 1421, 1498, 1566
Bst6I	CTCTTC	1 cut(s)	1264
BstAFI	CTTAAG	1 cut(s)	692
BstAPI	GCANNNNNTGC	1 cut(s)	20
BstBAI	YACGTR	1 cut(s)	2075
BstBI	TTCGAA	1 cut(s)	1267
BstC8I	GCNNGC	1 cut(s)	1802
BstDEI	CTNAG	4 cut(s)	260, 911, 1584, 1885
BstF5I	GGATG	9 cut(s)	5, 841, 1023, 1318, 1558, 1633, 1738, 2068, 2130
BstKTI	GATC	3 cut(s)	609, 768, 1000
BstMBI	GATC	3 cut(s)	606, 765, 997
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 672, 891, 1139
BstNI	CCWGG	2 cut(s)	770, 1389
BstSCI	CCNGG	2 cut(s)	768, 1387
BstSFI	CTRYAG	1 cut(s)	883
BstSLI	GKGCMC	1 cut(s)	1213
BstSNI	TACGTA	1 cut(s)	2075
BstV1I	GCAGC	1 cut(s)	10
BstV2I	GAAGAC	1 cut(s)	1901
BsuI	GTATCC	2 cut(s)	1181, 2064
BsuRI	GGCC	4 cut(s)	739, 1632, 1842, 1857
BtsCI	GGATG	9 cut(s)	5, 841, 1023, 1318, 1558, 1633, 1738, 2068, 2130
BtsIMutI	CAGTG	1 cut(s)	268
Cac8I	GCNNGC	1 cut(s)	1802
CaiI	CAGNNNCTG	2 cut(s)	404, 1564
CciI	TCATGA	1 cut(s)	1570
Cfr10I	RCCGGY	2 cut(s)	671, 1133
Cfr13I	GGNCC	1 cut(s)	1771
CsiI	ACCWGGT	1 cut(s)	1387
Csp6I	GTAC	3 cut(s)	645, 864, 1111
CviQI	GTAC	3 cut(s)	645, 864, 1111
DdeI	CTNAG	4 cut(s)	260, 911, 1584, 1885
DpnI	GATC	3 cut(s)	608, 767, 999
DpnII	GATC	3 cut(s)	606, 765, 997
DriI	GACNNNNNGTC	1 cut(s)	2053
Eam1104I	CTCTTC	1 cut(s)	1264
Eam1105I	GACNNNNNGTC	1 cut(s)	2053
EarI	CTCTTC	1 cut(s)	1264
Ecl136II	GAGCTC	1 cut(s)	197
Eco105I	TACGTA	1 cut(s)	2075
Eco24I	GRGCYC	1 cut(s)	199
Eco47I	GGWCC	1 cut(s)	1771
Eco53kI	GAGCTC	1 cut(s)	197
EcoICRI	GAGCTC	1 cut(s)	197
EcoO109I	RGGNCCY	1 cut(s)	1771
EcoRI	GAATTC	1 cut(s)	970
EcoRII	CCWGG	2 cut(s)	768, 1387
EcoT38I	GRGCYC	1 cut(s)	199
FalI	AAGNNNNNCTT	2 cut(s)	1893, 1925
FaqI	GGGAC	1 cut(s)	1784
FauI	CCCGC	1 cut(s)	1935
FauNDI	CATATG	2 cut(s)	297, 859
FbaI	TGATCA	1 cut(s)	606
FblI	GTMKAC	1 cut(s)	2046
Fnu4HI	GCNGC	1 cut(s)	24
FokI	GGATG	7 cut(s)	828, 1030, 1325, 1565, 1640, 1745, 2075
FriOI	GRGCYC	1 cut(s)	199
Fsp4HI	GCNGC	1 cut(s)	24
FspBI	CTAG	6 cut(s)	129, 192, 627, 846, 1046, 1374
GluI	GCNGC	1 cut(s)	24
HaeIII	GGCC	4 cut(s)	739, 1632, 1842, 1857
HapII	CCGG	3 cut(s)	672, 1134, 1598
HincII	GTYRAC	2 cut(s)	396, 445
HindII	GTYRAC	2 cut(s)	396, 445
HindIII	AAGCTT	3 cut(s)	101, 1140, 1754
HinfI	GANTC	7 cut(s)	292, 1264, 1279, 1601, 1834, 1964, 2024
HpaI	GTTAAC	1 cut(s)	445
HpaII	CCGG	3 cut(s)	672, 1134, 1598
HphI	GGTGA	2 cut(s)	165, 2007
Hpy166II	GTNNAC	6 cut(s)	344, 396, 445, 917, 1385, 2047
Hpy188I	TCNGA	3 cut(s)	1536, 1587, 2002
Hpy188III	TCNNGA	7 cut(s)	352, 1046, 1073, 1337, 1550, 1571, 2084
Hpy8I	GTNNAC	6 cut(s)	344, 396, 445, 917, 1385, 2047
HpyAV	CCTTC	4 cut(s)	502, 1215, 1847, 1889
HpyCH4III	ACNGT	7 cut(s)	239, 467, 529, 748, 1421, 1498, 1566
HpyCH4IV	ACGT	1 cut(s)	2074
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 672, 891, 1139
HpyF3I	CTNAG	4 cut(s)	260, 911, 1584, 1885
HpySE526I	ACGT	1 cut(s)	2074
Ksp22I	TGATCA	1 cut(s)	606
KspAI	GTTAAC	1 cut(s)	445
Kzo9I	GATC	3 cut(s)	606, 765, 997
LmnI	GCTCC	1 cut(s)	202
Lsp1109I	GCAGC	1 cut(s)	10
LweI	GCATC	3 cut(s)	1543, 1566, 2115
MabI	ACCWGGT	1 cut(s)	1387
MaeI	CTAG	6 cut(s)	129, 192, 627, 846, 1046, 1374
MaeII	ACGT	1 cut(s)	2074
MalI	GATC	3 cut(s)	608, 767, 999
MboI	GATC	3 cut(s)	606, 765, 997
MboII	GAAGA	9 cut(s)	69, 106, 147, 716, 838, 935, 1281, 1450, 1901
MfeI	CAATTG	1 cut(s)	2117
MhlI	GDGCHC	2 cut(s)	199, 1213
MluCI	AATT	9 cut(s)	82, 418, 970, 1687, 1693, 1713, 1720, 1761, 2117
MlyI	GAGTC	2 cut(s)	1958, 2018
MspCI	CTTAAG	1 cut(s)	692
MspI	CCGG	3 cut(s)	672, 1134, 1598
MspR9I	CCNGG	2 cut(s)	770, 1389
MunI	CAATTG	1 cut(s)	2117
MvaI	CCWGG	2 cut(s)	770, 1389
MwoI	GCNNNNNNNGC	4 cut(s)	20, 672, 891, 1139
NdeI	CATATG	2 cut(s)	297, 859
NdeII	GATC	3 cut(s)	606, 765, 997
NlaIV	GGNNCC	1 cut(s)	1772
NmuCI	GTSAC	4 cut(s)	529, 748, 1244, 2013
NspV	TTCGAA	1 cut(s)	1267
PagI	TCATGA	1 cut(s)	1570
PfeI	GAWTC	5 cut(s)	292, 1264, 1279, 1601, 1834
PkrI	GCNGC	1 cut(s)	25
PleI	GAGTC	2 cut(s)	1958, 2018
PpsI	GAGTC	2 cut(s)	1958, 2018
Ppu21I	YACGTR	1 cut(s)	2075
PpuMI	RGGWCCY	1 cut(s)	1771
PshBI	ATTAAT	2 cut(s)	654, 873
PsiI	TTATAA	1 cut(s)	1817
Psp124BI	GAGCTC	1 cut(s)	199
Psp5II	RGGWCCY	1 cut(s)	1771
Psp6I	CCWGG	2 cut(s)	768, 1387
PspGI	CCWGG	2 cut(s)	768, 1387
PspN4I	GGNNCC	1 cut(s)	1772
PspPI	GGNCC	1 cut(s)	1771
PspPPI	RGGWCCY	1 cut(s)	1771
PstI	CTGCAG	1 cut(s)	887
PstNI	CAGNNNCTG	2 cut(s)	404, 1564
RsaI	GTAC	3 cut(s)	646, 865, 1112
RsaNI	GTAC	3 cut(s)	645, 864, 1111
SacI	GAGCTC	1 cut(s)	199
SatI	GCNGC	1 cut(s)	24
Sau3AI	GATC	3 cut(s)	606, 765, 997
Sau96I	GGNCC	1 cut(s)	1771
SchI	GAGTC	2 cut(s)	1958, 2018
ScrFI	CCNGG	2 cut(s)	770, 1389
SduI	GDGCHC	2 cut(s)	199, 1213
SexAI	ACCWGGT	1 cut(s)	1387
SfaNI	GCATC	3 cut(s)	1543, 1566, 2115
SfcI	CTRYAG	1 cut(s)	883
SfuI	TTCGAA	1 cut(s)	1267
SinI	GGWCC	1 cut(s)	1771
SmlI	CTYRAG	2 cut(s)	215, 692
SmoI	CTYRAG	2 cut(s)	215, 692
SnaBI	TACGTA	1 cut(s)	2075
Sse9I	AATT	9 cut(s)	82, 418, 970, 1687, 1693, 1713, 1720, 1761, 2117
SsiI	CCGC	4 cut(s)	141, 835, 1167, 1942
SspI	AATATT	3 cut(s)	436, 1288, 1620
SspMI	CTAG	6 cut(s)	129, 192, 627, 846, 1046, 1374
SstI	GAGCTC	1 cut(s)	199
StyD4I	CCNGG	2 cut(s)	768, 1387
TaaI	ACNGT	7 cut(s)	239, 467, 529, 748, 1421, 1498, 1566
TaiI	ACGT	1 cut(s)	2077
TaqI	TCGA	2 cut(s)	1267, 1967
TasI	AATT	9 cut(s)	82, 418, 970, 1687, 1693, 1713, 1720, 1761, 2117
TatI	WGTACW	1 cut(s)	1110
TfiI	GAWTC	5 cut(s)	292, 1264, 1279, 1601, 1834
TscAI	CASTG	1 cut(s)	268
TseFI	GTSAC	4 cut(s)	529, 748, 1244, 2013
TseI	GCWGC	1 cut(s)	23
Tsp45I	GTSAC	4 cut(s)	529, 748, 1244, 2013
TspRI	CASTG	1 cut(s)	268
Vha464I	CTTAAG	1 cut(s)	692
VpaK11BI	GGWCC	1 cut(s)	1771
VspI	ATTAAT	2 cut(s)	654, 873
XapI	RAATTY	4 cut(s)	82, 970, 1687, 1713
XbaI	TCTAGA	1 cut(s)	1045
XmiI	GTMKAC	1 cut(s)	2046
XspI	CTAG	6 cut(s)	129, 192, 627, 846, 1046, 1374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.