No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g07280 |
| pyrus_communis | pycom05g27410 |
| rosa_chinensis | RchiOBHm_Chr1g0317771 RchiOBHm_Chr1g0317881 RchiOBHm_Chr2g0127981 |
| rosa_laevigata | RLG00000028639 RLG00000028642 RLG00000028648 RLG00000028650 RLG00000028656 RLG00000028967 RLG00000030392 RLG00000030584 RLG00000031858 |
| rosa_multiflora | Rmu_sc0001701.1_g000005 Rmu_sc0004705.1_g000039 |
| rosa_roxburghii | Rroxscaffold_3G00235560 Rroxscaffold_4G00316520 Rroxscaffold_4G00327040 |
| rosa_rugosa | Rorug01G0017500 Rorug05G0579300 |
| rosa_samantha | Rh1BG179300 Rh1DG042700 Rh1DG043600 Rh1DG209400 Rh4DG110000 Rh5DG086000 Rh6CG034000 |
| rosa_wichuraiana | Rw6G029660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 166 |
| AfaI | GTAC | 1 cut(s) | 103 |
| AgsI | TTSAA | 1 cut(s) | 68 |
| AluBI | AGCT | 1 cut(s) | 71 |
| AluI | AGCT | 1 cut(s) | 71 |
| AsuHPI | GGTGA | 1 cut(s) | 206 |
| BccI | CCATC | 2 cut(s) | 8, 225 |
| BfaI | CTAG | 1 cut(s) | 147 |
| BmcAI | AGTACT | 1 cut(s) | 103 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| BsgI | GTGCAG | 1 cut(s) | 54 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspACI | CCGC | 1 cut(s) | 166 |
| BssMI | GATC | 1 cut(s) | 130 |
| BstC8I | GCNNGC | 1 cut(s) | 168 |
| BstDEI | CTNAG | 1 cut(s) | 237 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMBI | GATC | 1 cut(s) | 130 |
| Cac8I | GCNNGC | 1 cut(s) | 168 |
| Csp6I | GTAC | 1 cut(s) | 102 |
| CviAII | CATG | 2 cut(s) | 179, 202 |
| CviJI | RGCY | 3 cut(s) | 71, 91, 170 |
| CviKI_1 | RGCY | 3 cut(s) | 71, 91, 170 |
| CviQI | GTAC | 1 cut(s) | 102 |
| DdeI | CTNAG | 1 cut(s) | 237 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| FaeI | CATG | 2 cut(s) | 182, 205 |
| FaiI | YATR | 4 cut(s) | 12, 29, 180, 203 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 60, 92 |
| FatI | CATG | 2 cut(s) | 178, 201 |
| FauI | CCCGC | 1 cut(s) | 159 |
| FspBI | CTAG | 1 cut(s) | 147 |
| Hin1II | CATG | 2 cut(s) | 182, 205 |
| HinfI | GANTC | 2 cut(s) | 38, 142 |
| HphI | GGTGA | 1 cut(s) | 206 |
| Hpy188I | TCNGA | 1 cut(s) | 196 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 197 |
| HpyCH4IV | ACGT | 1 cut(s) | 110 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 182 |
| HpyF3I | CTNAG | 1 cut(s) | 237 |
| HpySE526I | ACGT | 1 cut(s) | 110 |
| Hsp92II | CATG | 2 cut(s) | 182, 205 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LpnPI | CCDG | 1 cut(s) | 82 |
| MaeI | CTAG | 1 cut(s) | 147 |
| MaeII | ACGT | 1 cut(s) | 110 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 2 cut(s) | 132, 203 |
| MluCI | AATT | 1 cut(s) | 158 |
| MlyI | GAGTC | 1 cut(s) | 47 |
| MmeI | TCCRAC | 1 cut(s) | 93 |
| MnlI | CCTC | 2 cut(s) | 49, 75 |
| MseI | TTAA | 1 cut(s) | 125 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIII | CATG | 2 cut(s) | 182, 205 |
| PfeI | GAWTC | 1 cut(s) | 142 |
| PleI | GAGTC | 1 cut(s) | 46 |
| PpsI | GAGTC | 1 cut(s) | 46 |
| RsaI | GTAC | 1 cut(s) | 103 |
| RsaNI | GTAC | 1 cut(s) | 102 |
| SaqAI | TTAA | 1 cut(s) | 125 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| ScaI | AGTACT | 1 cut(s) | 103 |
| SchI | GAGTC | 1 cut(s) | 47 |
| SetI | ASST | 4 cut(s) | 73, 86, 113, 189 |
| SgeI | CNNG | 9 cut(s) | 19, 89, 109, 146, 159, 175, 179, 191, 214 |
| SmlI | CTYRAG | 1 cut(s) | 77 |
| SmoI | CTYRAG | 1 cut(s) | 77 |
| Sse9I | AATT | 1 cut(s) | 158 |
| SsiI | CCGC | 1 cut(s) | 166 |
| SspMI | CTAG | 1 cut(s) | 147 |
| TaiI | ACGT | 1 cut(s) | 113 |
| TaqI | TCGA | 1 cut(s) | 41 |
| TaqII | GACCGA | 1 cut(s) | 180 |
| TasI | AATT | 1 cut(s) | 158 |
| TatI | WGTACW | 1 cut(s) | 101 |
| TfiI | GAWTC | 1 cut(s) | 142 |
| Tru1I | TTAA | 1 cut(s) | 125 |
| Tru9I | TTAA | 1 cut(s) | 125 |
| XspI | CTAG | 1 cut(s) | 147 |
| ZrmI | AGTACT | 1 cut(s) | 103 |