pentatricopeptide repeat-containing protein At5g06400
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0334601 RchiOBHm_Chr1g0334631 RchiOBHm_Chr2g0109431 RchiOBHm_Chr2g0148431 RchiOBHm_Chr6g0275821 |
| rosa_laevigata | RLG00000009993 |
| rosa_multiflora | Rmu_sc0002221.1_g000003 Rmu_sc0004665.1_g000012 Rmu_sc0014838.1_g000002 Rmu_sc0017665.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00234660 Rroxscaffold_5G00342370 |
| rosa_rugosa | Rorug01G0476400 Rorug02G0443800 Rorug03G0163300 Rorug03G0163400 Rorug06G0151100 |
| rosa_samantha | Rh3BG247300 Rh4CG029600 Rh6BG125800 Rh6DG148400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 50 |
| AcuI | CTGAAG | 1 cut(s) | 114 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 81 |
| AgsI | TTSAA | 1 cut(s) | 162 |
| AluBI | AGCT | 2 cut(s) | 35, 180 |
| AluI | AGCT | 2 cut(s) | 35, 180 |
| ApeKI | GCWGC | 2 cut(s) | 23, 151 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| BbvCI | CCTCAGC | 1 cut(s) | 86 |
| BbvI | GCAGC | 2 cut(s) | 10, 163 |
| BisI | GCNGC | 2 cut(s) | 24, 152 |
| BlsI | GCNGC | 2 cut(s) | 25, 153 |
| BmsI | GCATC | 2 cut(s) | 116, 138 |
| Bpu10I | CCTNAGC | 1 cut(s) | 86 |
| BsaAI | YACGTR | 1 cut(s) | 11 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 81 |
| Bse1I | ACTGG | 1 cut(s) | 72 |
| Bse3DI | GCAATG | 1 cut(s) | 51 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 81 |
| BseMI | GCAATG | 1 cut(s) | 51 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseNI | ACTGG | 1 cut(s) | 72 |
| BseXI | GCAGC | 2 cut(s) | 10, 163 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 81 |
| BspCNI | CTCAG | 1 cut(s) | 78 |
| BsrDI | GCAATG | 1 cut(s) | 51 |
| BsrI | ACTGG | 1 cut(s) | 72 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 20 |
| BstBAI | YACGTR | 1 cut(s) | 11 |
| BstDEI | CTNAG | 1 cut(s) | 86 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 20, 32, 41 |
| BstV1I | GCAGC | 2 cut(s) | 10, 163 |
| CviJI | RGCY | 5 cut(s) | 35, 85, 117, 154, 180 |
| CviKI_1 | RGCY | 5 cut(s) | 35, 85, 117, 154, 180 |
| DdeI | CTNAG | 1 cut(s) | 86 |
| Eco57I | CTGAAG | 1 cut(s) | 114 |
| FaiI | YATR | 1 cut(s) | 146 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 152 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 152 |
| GluI | GCNGC | 2 cut(s) | 24, 152 |
| Hpy188III | TCNNGA | 1 cut(s) | 111 |
| HpyAV | CCTTC | 1 cut(s) | 75 |
| HpyCH4IV | ACGT | 1 cut(s) | 10 |
| HpyCH4V | TGCA | 3 cut(s) | 14, 107, 151 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 20, 32, 41 |
| HpyF3I | CTNAG | 1 cut(s) | 86 |
| HpySE526I | ACGT | 1 cut(s) | 10 |
| LmnI | GCTCC | 1 cut(s) | 177 |
| LpnPI | CCDG | 3 cut(s) | 12, 53, 96 |
| Lsp1109I | GCAGC | 2 cut(s) | 10, 163 |
| LweI | GCATC | 2 cut(s) | 116, 138 |
| MaeII | ACGT | 1 cut(s) | 10 |
| MluCI | AATT | 3 cut(s) | 50, 136, 157 |
| MnlI | CCTC | 5 cut(s) | 81, 92, 128, 165, 168 |
| MseI | TTAA | 1 cut(s) | 135 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 20, 32, 41 |
| PkrI | GCNGC | 2 cut(s) | 25, 153 |
| Ppu21I | YACGTR | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| SatI | GCNGC | 2 cut(s) | 24, 152 |
| SetI | ASST | 5 cut(s) | 13, 37, 92, 103, 182 |
| SfaNI | GCATC | 2 cut(s) | 116, 138 |
| SgeI | CNNG | 6 cut(s) | 23, 39, 70, 80, 123, 174 |
| Sse9I | AATT | 3 cut(s) | 50, 136, 157 |
| TaiI | ACGT | 1 cut(s) | 13 |
| TaqI | TCGA | 1 cut(s) | 124 |
| TasI | AATT | 3 cut(s) | 50, 136, 157 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TseI | GCWGC | 2 cut(s) | 23, 151 |
| XapI | RAATTY | 1 cut(s) | 50 |