RchiOBHm_Chr1g0343011

beta-galactosidase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
34826318 .. 34831664
5347 bp
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UTR
Exon/CDS
Intron
PRQ56959

Sequence Viewer

Length: 135 bp
ATGGAATACGAAATTGGTGCACCAGGTAAAGCCTACACTGATTGGGCAGCTCAAATGGTTGTGGGATTAAACACTAGTTTCCCCTGGATCTTGTGCAAACAAGATGATGCCCCTGATCCTGTTATTAACGCTTGA

Protein Analysis

44

Amino Acids

4.83

Weight (kDa)

4.05

Isoelectric Point (pI)

28.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 95, 110
AhlI ACTAGT 1 cut(s) 74
AjnI CCWGG 2 cut(s) 22, 83
AjuI GAANNNNNNNTTGG 1 cut(s) 29
AluBI AGCT 1 cut(s) 50
AluI AGCT 1 cut(s) 50
Alw21I GWGCWC 1 cut(s) 22
Alw44I GTGCAC 1 cut(s) 18
AlwI GGATC 2 cut(s) 95, 110
ApaLI GTGCAC 1 cut(s) 18
ApeKI GCWGC 1 cut(s) 47
BaeGI GKGCMC 1 cut(s) 22
Bbv12I GWGCWC 1 cut(s) 22
BbvI GCAGC 1 cut(s) 59
BcgI CGANNNNNNTGC 1 cut(s) 33
BciT130I CCWGG 2 cut(s) 24, 85
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 1 cut(s) 75
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
Bme1390I CCNGG 2 cut(s) 24, 85
BmrFI CCNGG 2 cut(s) 24, 85
BmsI GCATC 1 cut(s) 97
BsaJI CCNNGG 1 cut(s) 83
BseBI CCWGG 2 cut(s) 24, 85
BseDI CCNNGG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 22
BseXI GCAGC 1 cut(s) 59
BsiHKAI GWGCWC 1 cut(s) 22
Bsp1286I GDGCHC 1 cut(s) 22
Bsp143I GATC 2 cut(s) 87, 115
BspPI GGATC 2 cut(s) 95, 110
BssECI CCNNGG 1 cut(s) 83
BssMI GATC 2 cut(s) 87, 115
Bst2UI CCWGG 2 cut(s) 24, 85
BstKTI GATC 2 cut(s) 90, 118
BstMBI GATC 2 cut(s) 87, 115
BstNI CCWGG 2 cut(s) 24, 85
BstSCI CCNGG 2 cut(s) 22, 83
BstSLI GKGCMC 1 cut(s) 22
BstV1I GCAGC 1 cut(s) 59
BstX2I RGATCY 1 cut(s) 87
BstYI RGATCY 1 cut(s) 87
BtsIMutI CAGTG 1 cut(s) 36
CsiI ACCWGGT 1 cut(s) 22
CviJI RGCY 2 cut(s) 32, 50
CviKI_1 RGCY 2 cut(s) 32, 50
DpnI GATC 2 cut(s) 89, 117
DpnII GATC 2 cut(s) 87, 115
EcoRII CCWGG 2 cut(s) 22, 83
Fnu4HI GCNGC 1 cut(s) 48
Fsp4HI GCNGC 1 cut(s) 48
FspBI CTAG 1 cut(s) 75
GluI GCNGC 1 cut(s) 48
Hpy166II GTNNAC 1 cut(s) 20
Hpy8I GTNNAC 1 cut(s) 20
HpyCH4V TGCA 2 cut(s) 20, 96
Kzo9I GATC 2 cut(s) 87, 115
LpnPI CCDG 5 cut(s) 9, 36, 70, 97, 126
Lsp1109I GCAGC 1 cut(s) 59
LweI GCATC 1 cut(s) 97
MabI ACCWGGT 1 cut(s) 22
MaeI CTAG 1 cut(s) 75
MalI GATC 2 cut(s) 89, 117
MboI GATC 2 cut(s) 87, 115
MflI RGATCY 1 cut(s) 87
MhlI GDGCHC 1 cut(s) 22
MluCI AATT 1 cut(s) 12
MseI TTAA 2 cut(s) 68, 126
MspR9I CCNGG 2 cut(s) 24, 85
MvaI CCWGG 2 cut(s) 24, 85
NdeII GATC 2 cut(s) 87, 115
PkrI GCNGC 1 cut(s) 49
Psp6I CCWGG 2 cut(s) 22, 83
PspGI CCWGG 2 cut(s) 22, 83
PsuI RGATCY 1 cut(s) 87
SaqAI TTAA 2 cut(s) 68, 126
SatI GCNGC 1 cut(s) 48
Sau3AI GATC 2 cut(s) 87, 115
ScrFI CCNGG 2 cut(s) 24, 85
SduI GDGCHC 1 cut(s) 22
SetI ASST 2 cut(s) 28, 52
SexAI ACCWGGT 1 cut(s) 22
SfaNI GCATC 1 cut(s) 97
SgeI CNNG 9 cut(s) 35, 36, 87, 96, 97, 103, 113, 125, 131
SpeI ACTAGT 1 cut(s) 74
Sse9I AATT 1 cut(s) 12
SspMI CTAG 1 cut(s) 75
StyD4I CCNGG 2 cut(s) 22, 83
TasI AATT 1 cut(s) 12
Tru1I TTAA 2 cut(s) 68, 126
Tru9I TTAA 2 cut(s) 68, 126
TscAI CASTG 1 cut(s) 43
TseI GCWGC 1 cut(s) 47
TspRI CASTG 1 cut(s) 43
VneI GTGCAC 1 cut(s) 18
XspI CTAG 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.