Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002179

Physical Location & Seq

Genomic Coordinates Forward (+)

57589653 .. 57594974

Gene Structure 5322 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51069

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGAATGACAGTGGTAGTGGCGGCGTTAGGAGTAATGCCAAGGCTGAAGAAGAAGGCAGCACTGCTCCTCTTCCTGAGAAGGTTACTGTTGGTGGTTCCCCTGTCTACAGATTAGATAGAAAGCTGGGTAAGGGTGGCTTCGGACAAGTGTATGTCGGTCGGCGTGTTTCTGCTATAAATACGAATGAGAGAACTGGACCAGGAGCTGTTGAGGTGGCCTTAAAACTCGAGCACAAAAATAGTAAAGGGTGCAATTATGGACCGCCACAGGAGTGGAAAGTTTATGACACTCTTGGTGGCAGCCATGGTGTGCCGCGGGTACACTATAAGGGCAAGCAAGGCGAGTATTATATTATGGTGATGGACATGTTGGGGCCAAGCTTGTGGGATGTTTGGAATAATGGCAATCAAACAATGGCCATTGAAATGGTTGCGTGTATTGCCATTGAAGCAATATCAATATTGGAGAAGATGCATTCTCGAGGGTATGTACATGGAGATGTAAAGCCTGAAAACTTTCTACTTGGTACTCCTGGGACTCCTGATGAGAAAAAGCTATTTTTAGTTGATCTTGGACTAGCAACTAAATGGCGAGATAGTTCAACCGGTCAGCATGTTGATTATGACCAAAGGCCAGATGTTTTCAGAGGAACAGTACGTTACGCTAGTGTGCATGCTCATTTAGGGAGAACGAGTAGTAGGAGAGATGATCTTGAGTCTCTAGCTTATACCCTTGTGTTCCTTCTCCGGGGTCGCCTCCCCTGGCAAGGTTATCAGGGAGAGAATAAAGGATTCCTTGTCTGCAAGAAGAAGATGGCAACGTCTCCAGAGACCTTGTGTTCTTTCTGTCCACTCCCTTTTAGACAATTTGTTGAACATGTGGTGAACTTGAAGTTTGATGAAGAACCTAATTATGCAAAATATATATCACTATTTGATGGGACTGTAAGTCCAAATCCTGATATCAGGCCAATAAACACAGAGGGTGCACAGAAGCTTATTAATCTGGTTGGTCATAAGAGAGGAAGATTGACAATGGAGGAGGAGGATGATGAACAGCCAAAGAAGAGAATTAGAATGGGTATGCCAGCAACACAATGGATCAGTGTTTATAATGCTCGGAGACCGATGAAGCAAAGGTATCACTATAATGTGGCTGATACAAGGCTTGCTCAGCATATTGAGAAGGGGAACGAGGATGGGTTATATATTAGCAGTGTGGCTTCTTCTCAAAATTTGTGGGCCTTGATTATGGATGCAGGCACTGGTTTCACTTCCCAAGTTTATGAACTTGCTCCGACTTGTCTTCACAAGGAATGGATAATGGAGCAGTGGGAGAAAAACTATTACATCAGTGCATTAGCCGGAGCTACTAATGGGAGTTCATTAGTAGTAATGTCCAAGGGTACAACTTTTACGCAGCAGTCATACAAAGTCAGCGATACATTTCCATTTAAGTGGATTAACAAAAAGTGGAAAGAGGACTTTTTTGTTACGTCAATGGCCACTGCAGGAAGTAGATGGGCCATTGTTATGTCTCGGGGTGCTAATTATTCAGACCAAGTTGTTGAACTAGATTTCCTTTATCCTAGTGAAGGAATACATCGGCGCTGGGATTCTGGATATCGTATAACTGCAACTGCAGCAACATGGGATCAGGCCGCTTTTGTTCTCAGTGTGCCAAGGAAGAAGCCTCAAGATGAAACCCAGGAGACGCTTCGTACTTCTGCTTTTCCAAGTACACATGTCAAGGAGAAGTGGGCGAAGAACCTTTATATTGCATCTATTTGTTATGGACGAACAGTATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030100 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0060627 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0098657 GO:0140096 GO:1901265 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

603

Amino Acids

67.86

Weight (kDa)

8.9

Isoelectric Point (pI)

42.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	36 - 270	2.7e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	38 - 202	2.9e-07	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	143 - 247	2.8e-08	Fungal protein kinase
DUF7477	PF24289	337 - 603	2.9e-162	Domain of unknown function (DUF7477)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25760 AT2G25760
fragaria_vesca	FvH4_2g35440 FvH4_2g35440 FvH4_6g32280
malus_domestica	MD08G1111700.v1.1 MD09G1204700.v1.1 MD15G1091200.v1.1 MD17G1184900.v1.1
prunus_persica	Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.3G060400_v2.0.a1 Prupe.3G060400_v2.0.a1
pyrus_communis	pycom08g09280 pycom09g12160 pycom15g08520 pycom17g19440
rosa_chinensis	RchiOBHm_Chr2g0140231 RchiOBHm_Chr6g0306451
rosa_laevigata	RLG00000004784 RLG00000008671 RLG00000010797 RLG00000019857
rosa_multiflora	Rmu_sc0002971.1_g000017 Rmu_sc0005446.1_g000008
rosa_roxburghii	Rroxscaffold_2G00104970 Rroxscaffold_7G00161760
rosa_rugosa	Rorug02G0361500 Rorug06G0349500 Rorug06G0349600
rosa_samantha	Rh2AG412400 Rh2BG422700 Rh2CG398600 Rh6AG461700 Rh6BG439300 Rh6CG475800 Rh6DG462500
rosa_wichuraiana	Rw2G033800 Rw6G040240 Rw7G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1113
AccI	GTMKAC	1 cut(s)	105
AccII	CGCG	1 cut(s)	316
AciI	CCGC	5 cut(s)	21, 263, 314, 316, 1662
AclWI	GGATC	2 cut(s)	1109, 1662
AcoI	YGGCCR	2 cut(s)	417, 1503
AcsI	RAATTY	1 cut(s)	1234
AcuI	CTGAAG	1 cut(s)	66
AfaI	GTAC	7 cut(s)	321, 492, 529, 657, 1408, 1723, 1741
AfiI	CCNNNNNNNGG	3 cut(s)	748, 767, 1595
AflIII	ACRYGT	3 cut(s)	366, 877, 1744
AgeI	ACCGGT	1 cut(s)	605
AgsI	TTSAA	6 cut(s)	425, 449, 603, 875, 892, 1571
AhdI	GACNNNNNGTC	1 cut(s)	948
AjnI	CCWGG	4 cut(s)	199, 532, 761, 1707
AleI	CACNNNNGTG	1 cut(s)	271
AloI	GAACNNNNNNTCC	2 cut(s)	1563, 1595
AluBI	AGCT	7 cut(s)	124, 206, 381, 556, 725, 997, 1370
AluI	AGCT	7 cut(s)	124, 206, 381, 556, 725, 997, 1370
Alw21I	GWGCWC	2 cut(s)	234, 991
Alw26I	GTCTC	6 cut(s)	723, 824, 828, 1117, 1542, 1706
Alw44I	GTGCAC	1 cut(s)	987
AlwI	GGATC	2 cut(s)	1109, 1662
AlwNI	CAGNNNCTG	2 cut(s)	206, 1265
Ama87I	CYCGRG	3 cut(s)	227, 480, 1539
AoxI	GGCC	9 cut(s)	216, 374, 417, 632, 968, 1242, 1503, 1524, 1659
ApaLI	GTGCAC	1 cut(s)	987
ApeKI	GCWGC	4 cut(s)	57, 300, 1420, 1643
ApoI	RAATTY	1 cut(s)	1234
AseI	ATTAAT	1 cut(s)	1002
AsiGI	ACCGGT	1 cut(s)	605
Asp700I	GAANNNNTTC	1 cut(s)	516
AspLEI	GCGC	1 cut(s)	1611
AspS9I	GGNCC	5 cut(s)	197, 260, 374, 1242, 1524
AsuC2I	CCSGG	1 cut(s)	749
AsuHPI	GGTGA	2 cut(s)	370, 895
AvaI	CYCGRG	3 cut(s)	227, 480, 1539
AvaII	GGWCC	2 cut(s)	197, 260
BaeGI	GKGCMC	1 cut(s)	991
BalI	TGGCCA	2 cut(s)	419, 1505
BbsI	GAAGAC	1 cut(s)	1298
Bbv12I	GWGCWC	2 cut(s)	234, 991
BbvI	GCAGC	4 cut(s)	69, 312, 1432, 1655
BccI	CCATC	5 cut(s)	355, 808, 932, 1193, 1515
BciT130I	CCWGG	4 cut(s)	201, 534, 763, 1709
BcnI	CCSGG	1 cut(s)	749
BcoDI	GTCTC	6 cut(s)	723, 824, 828, 1117, 1542, 1706
BfaI	CTAG	5 cut(s)	578, 666, 722, 1574, 1590
BfmI	CTRYAG	3 cut(s)	106, 1509, 1641
BfoI	RGCGCY	1 cut(s)	1612
BisI	GCNGC	7 cut(s)	22, 58, 301, 314, 1421, 1644, 1662
BlpI	GCTNAGC	1 cut(s)	1173
BlsI	GCNGC	7 cut(s)	23, 59, 302, 315, 1422, 1645, 1663
Bme1390I	CCNGG	5 cut(s)	201, 534, 749, 763, 1709
Bme18I	GGWCC	2 cut(s)	197, 260
BmeRI	GACNNNNNGTC	1 cut(s)	948
BmeT110I	CYCGRG	3 cut(s)	227, 480, 1539
BmgT120I	GGNCC	5 cut(s)	197, 260, 374, 1242, 1524
BmiI	GGNNCC	2 cut(s)	97, 375
BmrFI	CCNGG	5 cut(s)	201, 534, 749, 763, 1709
BmsI	GCATC	3 cut(s)	462, 1246, 1790
BpiI	GAAGAC	1 cut(s)	1298
BpmI	CTGGAG	1 cut(s)	810
Bpu1102I	GCTNAGC	1 cut(s)	1173
BpuEI	CTTGAG	2 cut(s)	734, 1680
BpuMI	CCSGG	1 cut(s)	749
BsaI	GGTCTC	2 cut(s)	824, 1117
BsaJI	CCNNGG	9 cut(s)	39, 304, 314, 533, 748, 761, 1401, 1682, 1707
BsaWI	WCCGGW	1 cut(s)	605
BsaXI	ACNNNNNCTCC	2 cut(s)	679, 709
Bsc4I	CCNNNNNNNGG	3 cut(s)	748, 767, 1595
Bse118I	RCCGGY	1 cut(s)	605
Bse1I	ACTGG	2 cut(s)	199, 1270
BseBI	CCWGG	4 cut(s)	201, 534, 763, 1709
BseDI	CCNNGG	9 cut(s)	39, 304, 314, 533, 748, 761, 1401, 1682, 1707
BseGI	GGATG	4 cut(s)	394, 1054, 1204, 1261
BseLI	CCNNNNNNNGG	3 cut(s)	748, 767, 1595
BseMII	CTCAG	3 cut(s)	66, 1187, 1687
BseNI	ACTGG	2 cut(s)	199, 1270
BseRI	GAGGAG	3 cut(s)	57, 1055, 1058
BseSI	GKGCMC	1 cut(s)	991
BseXI	GCAGC	4 cut(s)	69, 312, 1432, 1655
BseYI	CCCAGC	2 cut(s)	124, 1611
Bsh1236I	CGCG	1 cut(s)	316
Bsh1285I	CGRYCG	1 cut(s)	160
BshFI	GGCC	9 cut(s)	218, 376, 419, 634, 970, 1244, 1505, 1526, 1661
BshTI	ACCGGT	1 cut(s)	605
BsiEI	CGRYCG	1 cut(s)	160
BsiHKAI	GWGCWC	2 cut(s)	234, 991
BsiHKCI	CYCGRG	3 cut(s)	227, 480, 1539
BsiSI	CCGG	3 cut(s)	606, 748, 1365
BslFI	GGGAC	2 cut(s)	550, 955
BslI	CCNNNNNNNGG	3 cut(s)	748, 767, 1595
BsmAI	GTCTC	6 cut(s)	723, 824, 828, 1117, 1542, 1706
BsmBI	CGTCTC	2 cut(s)	828, 1706
BsmFI	GGGAC	2 cut(s)	550, 955
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	9 cut(s)	218, 376, 419, 634, 970, 1244, 1505, 1526, 1661
Bso31I	GGTCTC	2 cut(s)	824, 1117
BsoBI	CYCGRG	3 cut(s)	227, 480, 1539
Bsp1286I	GDGCHC	2 cut(s)	234, 991
Bsp1407I	TGTACA	1 cut(s)	490
Bsp143I	GATC	4 cut(s)	568, 709, 1101, 1654
Bsp1720I	GCTNAGC	1 cut(s)	1173
Bsp19I	CCATGG	1 cut(s)	304
BspACI	CCGC	5 cut(s)	21, 263, 314, 316, 1662
BspANI	GGCC	9 cut(s)	218, 376, 419, 634, 970, 1244, 1505, 1526, 1661
BspCNI	CTCAG	3 cut(s)	67, 1186, 1686
BspFNI	CGCG	1 cut(s)	316
BspLI	GGNNCC	2 cut(s)	97, 375
BspMAI	CTGCAG	2 cut(s)	1513, 1645
BspPI	GGATC	2 cut(s)	1109, 1662
BspTNI	GGTCTC	2 cut(s)	824, 1117
BsrFI	RCCGGY	1 cut(s)	605
BsrGI	TGTACA	1 cut(s)	490
BsrI	ACTGG	2 cut(s)	199, 1270
BssAI	RCCGGY	1 cut(s)	605
BssECI	CCNNGG	9 cut(s)	39, 304, 314, 533, 748, 761, 1401, 1682, 1707
BssMI	GATC	4 cut(s)	568, 709, 1101, 1654
BssT1I	CCWWGG	4 cut(s)	39, 304, 1401, 1682
Bst2UI	CCWGG	4 cut(s)	201, 534, 763, 1709
Bst4CI	ACNGT	5 cut(s)	11, 88, 655, 946, 1804
Bst6I	CTCTTC	2 cut(s)	75, 1061
BstAUI	TGTACA	1 cut(s)	490
BstC8I	GCNNGC	5 cut(s)	335, 675, 1089, 1170, 1261
BstDEI	CTNAG	3 cut(s)	75, 1173, 1673
BstDSI	CCRYGG	2 cut(s)	304, 314
BstENI	CCTNNNNNAGG	1 cut(s)	1593
BstF5I	GGATG	4 cut(s)	394, 1054, 1204, 1261
BstFNI	CGCG	1 cut(s)	316
BstH2I	RGCGCY	1 cut(s)	1612
BstHHI	GCGC	1 cut(s)	1611
BstKTI	GATC	4 cut(s)	571, 712, 1104, 1657
BstMAI	GTCTC	6 cut(s)	723, 824, 828, 1117, 1542, 1706
BstMBI	GATC	4 cut(s)	568, 709, 1101, 1654
BstMCI	CGRYCG	1 cut(s)	160
BstMWI	GCNNNNNNNGC	5 cut(s)	339, 440, 449, 1174, 1643
BstNI	CCWGG	4 cut(s)	201, 534, 763, 1709
BstNSI	RCATGY	5 cut(s)	370, 617, 677, 881, 1748
BstSCI	CCNGG	5 cut(s)	199, 532, 747, 761, 1707
BstSFI	CTRYAG	3 cut(s)	106, 1509, 1641
BstSLI	GKGCMC	1 cut(s)	991
BstUI	CGCG	1 cut(s)	316
BstV1I	GCAGC	4 cut(s)	69, 312, 1432, 1655
BstV2I	GAAGAC	1 cut(s)	1298
BstXI	CCANNNNNNTGG	4 cut(s)	273, 384, 427, 1458
BsuRI	GGCC	9 cut(s)	218, 376, 419, 634, 970, 1244, 1505, 1526, 1661
BtgI	CCRYGG	2 cut(s)	304, 314
BtsCI	GGATG	4 cut(s)	394, 1054, 1204, 1261
BtsI	GCAGTG	4 cut(s)	60, 1222, 1337, 1506
BtsIMutI	CAGTG	9 cut(s)	16, 60, 1111, 1222, 1263, 1337, 1360, 1506, 1681
Cac8I	GCNNGC	5 cut(s)	335, 675, 1089, 1170, 1261
CaiI	CAGNNNCTG	2 cut(s)	206, 1265
CfoI	GCGC	1 cut(s)	1611
Cfr10I	RCCGGY	1 cut(s)	605
Cfr13I	GGNCC	5 cut(s)	197, 260, 374, 1242, 1524
Cfr42I	CCGCGG	1 cut(s)	317
CseI	GACGC	1 cut(s)	1723
Csp6I	GTAC	7 cut(s)	320, 491, 528, 656, 1407, 1722, 1740
CspAI	ACCGGT	1 cut(s)	605
CspCI	CAANNNNNGTGG	2 cut(s)	1220, 1255
CviAII	CATG	8 cut(s)	305, 367, 494, 614, 674, 878, 1650, 1745
CviQI	GTAC	7 cut(s)	320, 491, 528, 656, 1407, 1722, 1740
DdeI	CTNAG	3 cut(s)	75, 1173, 1673
DpnI	GATC	4 cut(s)	570, 711, 1103, 1656
DpnII	GATC	4 cut(s)	568, 709, 1101, 1654
DriI	GACNNNNNGTC	1 cut(s)	948
EaeI	YGGCCR	2 cut(s)	417, 1503
Eam1104I	CTCTTC	2 cut(s)	75, 1061
Eam1105I	GACNNNNNGTC	1 cut(s)	948
EarI	CTCTTC	2 cut(s)	75, 1061
Eco130I	CCWWGG	4 cut(s)	39, 304, 1401, 1682
Eco31I	GGTCTC	2 cut(s)	824, 1117
Eco32I	GATATC	2 cut(s)	964, 1625
Eco47I	GGWCC	2 cut(s)	197, 260
Eco57I	CTGAAG	1 cut(s)	66
Eco88I	CYCGRG	3 cut(s)	227, 480, 1539
EcoNI	CCTNNNNNAGG	1 cut(s)	1593
EcoRII	CCWGG	4 cut(s)	199, 532, 761, 1707
EcoRV	GATATC	2 cut(s)	964, 1625
EcoT14I	CCWWGG	4 cut(s)	39, 304, 1401, 1682
EcoT22I	ATGCAT	1 cut(s)	477
ErhI	CCWWGG	4 cut(s)	39, 304, 1401, 1682
Esp3I	CGTCTC	2 cut(s)	828, 1706
FaeI	CATG	8 cut(s)	308, 370, 497, 617, 677, 881, 1653, 1748
FalI	AAGNNNNNCTT	4 cut(s)	122, 154, 780, 812
FaqI	GGGAC	2 cut(s)	550, 955
FatI	CATG	8 cut(s)	304, 366, 493, 613, 673, 877, 1649, 1744
FauI	CCCGC	1 cut(s)	309
FblI	GTMKAC	1 cut(s)	105
Fnu4HI	GCNGC	7 cut(s)	22, 58, 301, 314, 1421, 1644, 1662
FokI	GGATG	4 cut(s)	401, 1061, 1211, 1268
Fsp4HI	GCNGC	7 cut(s)	22, 58, 301, 314, 1421, 1644, 1662
FspBI	CTAG	5 cut(s)	578, 666, 722, 1574, 1590
GlaI	GCGC	1 cut(s)	1610
GluI	GCNGC	7 cut(s)	22, 58, 301, 314, 1421, 1644, 1662
GsaI	CCCAGC	2 cut(s)	128, 1615
GsuI	CTGGAG	1 cut(s)	810
HaeII	RGCGCY	1 cut(s)	1612
HaeIII	GGCC	9 cut(s)	218, 376, 419, 634, 970, 1244, 1505, 1526, 1661
HapII	CCGG	3 cut(s)	606, 748, 1365
HgaI	GACGC	1 cut(s)	1723
HhaI	GCGC	1 cut(s)	1611
Hin1II	CATG	8 cut(s)	308, 370, 497, 617, 677, 881, 1653, 1748
Hin6I	GCGC	1 cut(s)	1609
HinP1I	GCGC	1 cut(s)	1609
HindIII	AAGCTT	2 cut(s)	379, 995
HinfI	GANTC	4 cut(s)	538, 716, 792, 1616
HpaII	CCGG	3 cut(s)	606, 748, 1365
HphI	GGTGA	2 cut(s)	370, 895
Hpy166II	GTNNAC	6 cut(s)	106, 322, 851, 886, 989, 1742
Hpy188I	TCNGA	5 cut(s)	143, 647, 1122, 1299, 1558
Hpy188III	TCNNGA	8 cut(s)	74, 480, 542, 713, 827, 959, 1620, 1697
Hpy8I	GTNNAC	6 cut(s)	106, 322, 851, 886, 989, 1742
HpyAV	CCTTC	5 cut(s)	47, 73, 752, 1180, 1589
HpyCH4III	ACNGT	5 cut(s)	11, 88, 655, 946, 1804
HpyCH4IV	ACGT	3 cut(s)	658, 821, 1496
HpyF10VI	GCNNNNNNNGC	5 cut(s)	339, 440, 449, 1174, 1643
HpyF3I	CTNAG	3 cut(s)	75, 1173, 1673
HpySE526I	ACGT	3 cut(s)	658, 821, 1496
Hsp92II	CATG	8 cut(s)	308, 370, 497, 617, 677, 881, 1653, 1748
HspAI	GCGC	1 cut(s)	1609
KspI	CCGCGG	1 cut(s)	317
Kzo9I	GATC	4 cut(s)	568, 709, 1101, 1654
LmnI	GCTCC	5 cut(s)	70, 203, 1300, 1327, 1367
Lsp1109I	GCAGC	4 cut(s)	69, 312, 1432, 1655
LweI	GCATC	3 cut(s)	462, 1246, 1790
MaeI	CTAG	5 cut(s)	578, 666, 722, 1574, 1590
MaeII	ACGT	3 cut(s)	658, 821, 1496
MaeIII	GTNAC	3 cut(s)	82, 659, 1492
MalI	GATC	4 cut(s)	570, 711, 1103, 1656
MboI	GATC	4 cut(s)	568, 709, 1101, 1654
MhlI	GDGCHC	2 cut(s)	234, 991
MlsI	TGGCCA	2 cut(s)	419, 1505
MluCI	AATT	6 cut(s)	253, 866, 910, 1071, 1234, 1549
MluNI	TGGCCA	2 cut(s)	419, 1505
MlyI	GAGTC	2 cut(s)	532, 725
MmeI	TCCRAC	1 cut(s)	1322
Mox20I	TGGCCA	2 cut(s)	419, 1505
Mph1103I	ATGCAT	1 cut(s)	477
MroXI	GAANNNNTTC	1 cut(s)	516
MscI	TGGCCA	2 cut(s)	419, 1505
MseI	TTAA	4 cut(s)	221, 1002, 1455, 1464
MslI	CAYNNNNRTG	6 cut(s)	271, 425, 498, 1149, 1456, 1532
Msp20I	TGGCCA	2 cut(s)	419, 1505
MspA1I	CMGCKG	1 cut(s)	316
MspI	CCGG	3 cut(s)	606, 748, 1365
MspR9I	CCNGG	5 cut(s)	201, 534, 749, 763, 1709
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	4 cut(s)	201, 534, 763, 1709
MvnI	CGCG	1 cut(s)	316
MwoI	GCNNNNNNNGC	5 cut(s)	339, 440, 449, 1174, 1643
NciI	CCSGG	1 cut(s)	749
NcoI	CCATGG	1 cut(s)	304
NdeII	GATC	4 cut(s)	568, 709, 1101, 1654
NlaIII	CATG	8 cut(s)	308, 370, 497, 617, 677, 881, 1653, 1748
NlaIV	GGNNCC	2 cut(s)	97, 375
NsiI	ATGCAT	1 cut(s)	477
NspI	RCATGY	5 cut(s)	370, 617, 677, 881, 1748
OliI	CACNNNNGTG	1 cut(s)	271
PaeI	GCATGC	1 cut(s)	677
PaeR7I	CTCGAG	2 cut(s)	227, 480
PciI	ACATGT	3 cut(s)	366, 877, 1744
PctI	GAATGC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	516
PfeI	GAWTC	2 cut(s)	792, 1616
PinAI	ACCGGT	1 cut(s)	605
PkrI	GCNGC	7 cut(s)	23, 59, 302, 315, 1422, 1645, 1663
PleI	GAGTC	2 cut(s)	532, 724
PpsI	GAGTC	2 cut(s)	532, 724
PscI	ACATGT	3 cut(s)	366, 877, 1744
PshBI	ATTAAT	1 cut(s)	1002
PsiI	TTATAA	1 cut(s)	1113
Psp6I	CCWGG	4 cut(s)	199, 532, 761, 1707
PspFI	CCCAGC	2 cut(s)	124, 1611
PspGI	CCWGG	4 cut(s)	199, 532, 761, 1707
PspN4I	GGNNCC	2 cut(s)	97, 375
PspPI	GGNCC	5 cut(s)	197, 260, 374, 1242, 1524
PspXI	VCTCGAGB	1 cut(s)	227
PstI	CTGCAG	2 cut(s)	1513, 1645
PstNI	CAGNNNCTG	2 cut(s)	206, 1265
RsaI	GTAC	7 cut(s)	321, 492, 529, 657, 1408, 1723, 1741
RsaNI	GTAC	7 cut(s)	320, 491, 528, 656, 1407, 1722, 1740
RseI	CAYNNNNRTG	6 cut(s)	271, 425, 498, 1149, 1456, 1532
SacII	CCGCGG	1 cut(s)	317
SaqAI	TTAA	4 cut(s)	221, 1002, 1455, 1464
SatI	GCNGC	7 cut(s)	22, 58, 301, 314, 1421, 1644, 1662
Sau3AI	GATC	4 cut(s)	568, 709, 1101, 1654
Sau96I	GGNCC	5 cut(s)	197, 260, 374, 1242, 1524
SchI	GAGTC	2 cut(s)	532, 725
ScrFI	CCNGG	5 cut(s)	201, 534, 749, 763, 1709
SduI	GDGCHC	2 cut(s)	234, 991
SfaNI	GCATC	3 cut(s)	462, 1246, 1790
SfcI	CTRYAG	3 cut(s)	106, 1509, 1641
Sfr274I	CTCGAG	2 cut(s)	227, 480
Sfr303I	CCGCGG	1 cut(s)	317
SgrBI	CCGCGG	1 cut(s)	317
SinI	GGWCC	2 cut(s)	197, 260
SlaI	CTCGAG	2 cut(s)	227, 480
SmiMI	CAYNNNNRTG	6 cut(s)	271, 425, 498, 1149, 1456, 1532
SmlI	CTYRAG	4 cut(s)	227, 480, 713, 1695
SmoI	CTYRAG	4 cut(s)	227, 480, 713, 1695
SphI	GCATGC	1 cut(s)	677
Sse9I	AATT	6 cut(s)	253, 866, 910, 1071, 1234, 1549
SsiI	CCGC	5 cut(s)	21, 263, 314, 316, 1662
SspI	AATATT	1 cut(s)	462
SspMI	CTAG	5 cut(s)	578, 666, 722, 1574, 1590
StyD4I	CCNGG	5 cut(s)	199, 532, 747, 761, 1707
StyI	CCWWGG	4 cut(s)	39, 304, 1401, 1682
TaaI	ACNGT	5 cut(s)	11, 88, 655, 946, 1804
TaiI	ACGT	3 cut(s)	661, 824, 1499
TaqI	TCGA	2 cut(s)	228, 481
TaqII	GACCGA	2 cut(s)	146, 1141
TasI	AATT	6 cut(s)	253, 866, 910, 1071, 1234, 1549
TatI	WGTACW	2 cut(s)	490, 1739
TauI	GCSGC	3 cut(s)	24, 316, 1664
TfiI	GAWTC	2 cut(s)	792, 1616
Tru1I	TTAA	4 cut(s)	221, 1002, 1455, 1464
Tru9I	TTAA	4 cut(s)	221, 1002, 1455, 1464
TscAI	CASTG	9 cut(s)	16, 67, 1111, 1222, 1270, 1337, 1360, 1513, 1681
TseI	GCWGC	4 cut(s)	57, 300, 1420, 1643
TspDTI	ATGAA	7 cut(s)	17, 915, 1068, 1145, 1302, 1374, 1716
TspRI	CASTG	9 cut(s)	16, 67, 1111, 1222, 1270, 1337, 1360, 1513, 1681
VneI	GTGCAC	1 cut(s)	987
VpaK11BI	GGWCC	2 cut(s)	197, 260
VspI	ATTAAT	1 cut(s)	1002
XagI	CCTNNNNNAGG	1 cut(s)	1593
XapI	RAATTY	1 cut(s)	1234
XceI	RCATGY	5 cut(s)	370, 617, 677, 881, 1748
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1095
XhoI	CTCGAG	2 cut(s)	227, 480
XmiI	GTMKAC	1 cut(s)	105
XmnI	GAANNNNTTC	1 cut(s)	516
XspI	CTAG	5 cut(s)	578, 666, 722, 1574, 1590
Zsp2I	ATGCAT	1 cut(s)	477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.