Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002179

Physical Location & Seq

Genomic Coordinates Forward (+)

54163357 .. 54169307

Gene Structure 5951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG398600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGCCGGTACTGCGTGGAAGGGGCCGTGGAGCAGCTAAAAAGCAGGAGGTTACGAATCCGATCGACGCCGGAGAGGCCATTGCCACCAGAACAAGGCGAAGGCGAGCGGCGGCGGCGGCGGCACTGCCGAATAATAATAATAATAATAACAACAACAATCAGGTGAAGGAGGAAAAGAATCGGAAGGCAGCGGCTGCGGCTGCGGCCGGTGAGGAGAAGAAGGTAGTCGTTAAGGCGGAGAAAAAGAGGGTCGTTGAGAAGGAGGAAGTGAAAGAGAAGAAGATGAATGACAGTGGTAGTGGCGGCGTTAGGAGTAATGCCAAGGCTGAAGAAGAAGGCAGCACTGCTCCTCTTCCTGAGAAGGTTACTGTTGGTGGTTCCCCTGTCTACAGATTAGATAGAAAGCTGGGTAAGGGTGGCTTCGGACAAGTGTATGTTGGTCGGCGTGTTTCTGCTATAAATACGAATGAGAGAACTGGACCAGGAGCTGTTGAGGTGGCCTTAAAACTCGAGCACAAAAATAGTAAAGGGTGCAATTATGGACCGCCACAGGAGTGGAAAGTTTATGACACTCTTGGTGGCAGCCATGGTGTGCCTCGGGTACACTATAAGGGCAAGCAAGGCGAGTATTATATTATGGTGATGGACATGTTGGGGCCAAGCTTGTGGGATGTTTGGAATAATGGCAATCAAACAATGGCCATTGAAATGGTTGCGTGTATTGCCATTGAAGCAATATCAATATTGGAGAAGATGCATTCTCGAGGGTATGTACATGGAGATGTAAAGCCTGAAAACTTTCTACTTGGTACTCCTGGGACTCCTGATGAGAAAAAGCTATTTTTAGTTGATCTTGGACTAGCAACTAAATGGCGAGATAGTTCAACCGGTCAGCATGTTGATTATGACCAAAGGCCAGATGTTTTCAGAGGAACAGTACGTTACGCTAGTGTGCATGCTCATTTAGGGAGAACGAGTAGTAGGAGAGATGATCTTGAGTCTCTAGCTTATACCCTTGTGTTCCTTCTCCGGGGTCGCCTCCCCTGGCAAGGATATCAGGGAGAGAATAAAGGATTCCTTGTCTGCAAGAAGAAGATGGCAACGTCTCCAGAGACCTTGTGTTCTTTCTGTCCACTCCCTTTTAGACAATTTGTTGAACATGTGGTGAACTTGAAGTTTGATGAAGAACCTAATTATGCAAAATATATATCACTATTTGATGGGACTGTAAGTCCAAATCCTGATATCAGGCCAATAAACACAGAGGGTGCACAGAAGCTTATTAATCTGGTTGGTCATAAGAGAGGAAGATTGACAATGGAGGAGGAGGATGATGAACAACCAAAGAAGAGAATTAGAATGGGTATGCCAGCAACACAATGGATCAGTGTTTATAATGCTCGGAGACCGATGAAGCAAAGGTATCACTATAATGTGGCTGATACAAGGCTTGCTCAGCATATTGAGAAGGGGAACGAGGATGGGTTATATATTAGCAGTGTGGCTTCTTCTCAAAATTTGTGGGCCTTGATTATGGATGCAGGCACTGGTTTCACTTCCCAAGTTTATGAACTTGCTCCGACTTGTCTTCACAAGGAATGGATAATGGAGCAGTGGGAGAAAAACTATTATATCAGTGCATTAGCCGGAGCTACTAATGGGAGTTCATTAGTAGTAATGTCCAAGGTTGATTGTGTTCAGGTACAACTTTTACGCAGCAATCATACAAAGTCAGCGATACATTTCCATTTAAGTGGATTAACAAAAAGTGGAAAGAGGACTTTTTTGTTACGTCAATGGCCACTGCAGGAAGTAGATGGGCCATTGTTATGTCTCGGGGTGCTAATTATTCAGACCAAGTTGTTGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030100 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0060627 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0098657 GO:0140096 GO:1901265 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

623

Amino Acids

69.45

Weight (kDa)

9.38

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase_fungal	PF17667	83 - 341	7.6e-09	Fungal protein kinase
Pkinase	PF00069	130 - 364	2.9e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	132 - 296	3.2e-07	Protein tyrosine and serine/threonine kinase
DUF7477	PF24289	431 - 566	2e-72	Domain of unknown function (DUF7477)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25760 AT2G25760
fragaria_vesca	FvH4_2g35440 FvH4_2g35440 FvH4_6g32280
malus_domestica	MD08G1111700.v1.1 MD09G1204700.v1.1 MD15G1091200.v1.1 MD17G1184900.v1.1
prunus_persica	Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.3G060400_v2.0.a1 Prupe.3G060400_v2.0.a1
pyrus_communis	pycom08g09280 pycom09g12160 pycom15g08520 pycom17g19440
rosa_chinensis	RchiOBHm_Chr2g0140231 RchiOBHm_Chr6g0306451
rosa_laevigata	RLG00000004784 RLG00000008671 RLG00000010797 RLG00000019857
rosa_multiflora	Rmu_sc0002971.1_g000017 Rmu_sc0005446.1_g000008
rosa_roxburghii	Rroxscaffold_2G00104970 Rroxscaffold_7G00161760
rosa_rugosa	Rorug02G0361500 Rorug06G0349500 Rorug06G0349600
rosa_samantha	Rh2AG412400 Rh2BG422700 Rh2CG398600 Rh6AG461700 Rh6BG439300 Rh6CG475800 Rh6DG462500
rosa_wichuraiana	Rw2G033800 Rw6G040240 Rw7G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1395
AccBSI	CCGCTC	1 cut(s)	107
AccI	GTMKAC	1 cut(s)	387
AclWI	GGATC	1 cut(s)	1391
AcoI	YGGCCR	3 cut(s)	204, 699, 1799
AcsI	RAATTY	1 cut(s)	1516
AcuI	CTGAAG	1 cut(s)	348
AcyI	GRCGYC	1 cut(s)	66
AfaI	GTAC	6 cut(s)	9, 603, 774, 811, 939, 1704
AfiI	CCNNNNNNNGG	3 cut(s)	93, 1030, 1049
AflIII	ACRYGT	2 cut(s)	648, 1159
AgeI	ACCGGT	1 cut(s)	887
AgsI	TTSAA	6 cut(s)	707, 731, 885, 1157, 1174, 1867
AhdI	GACNNNNNGTC	1 cut(s)	1230
AjnI	CCWGG	3 cut(s)	481, 814, 1043
AleI	CACNNNNGTG	1 cut(s)	553
AluBI	AGCT	8 cut(s)	35, 406, 488, 663, 838, 1007, 1279, 1652
AluI	AGCT	8 cut(s)	35, 406, 488, 663, 838, 1007, 1279, 1652
Alw21I	GWGCWC	2 cut(s)	516, 1273
Alw26I	GTCTC	5 cut(s)	1005, 1106, 1110, 1399, 1838
Alw44I	GTGCAC	1 cut(s)	1269
AlwI	GGATC	1 cut(s)	1391
AlwNI	CAGNNNCTG	3 cut(s)	194, 488, 1547
Ama87I	CYCGRG	4 cut(s)	509, 597, 762, 1835
ApaLI	GTGCAC	1 cut(s)	1269
ApeKI	GCWGC	7 cut(s)	32, 188, 194, 200, 339, 582, 1716
ApoI	RAATTY	1 cut(s)	1516
AseI	ATTAAT	1 cut(s)	1284
AsiGI	ACCGGT	1 cut(s)	887
Asp700I	GAANNNNTTC	1 cut(s)	798
AspS9I	GGNCC	6 cut(s)	22, 479, 542, 656, 1524, 1820
AsuC2I	CCSGG	1 cut(s)	1031
AsuHPI	GGTGA	4 cut(s)	175, 221, 652, 1177
AvaI	CYCGRG	4 cut(s)	509, 597, 762, 1835
AvaII	GGWCC	2 cut(s)	479, 542
BaeGI	GKGCMC	1 cut(s)	1273
BalI	TGGCCA	2 cut(s)	701, 1801
BbsI	GAAGAC	1 cut(s)	1580
Bbv12I	GWGCWC	2 cut(s)	516, 1273
BbvI	GCAGC	7 cut(s)	44, 181, 187, 200, 351, 594, 1728
BccI	CCATC	5 cut(s)	637, 1090, 1214, 1475, 1811
BceAI	ACGGC	1 cut(s)	9
BciT130I	CCWGG	3 cut(s)	483, 816, 1045
BcnI	CCSGG	1 cut(s)	1031
BcoDI	GTCTC	5 cut(s)	1005, 1106, 1110, 1399, 1838
BfaI	CTAG	4 cut(s)	860, 948, 1004, 1870
BfmI	CTRYAG	2 cut(s)	388, 1805
BglI	GCCNNNNNGGC	1 cut(s)	74
BlpI	GCTNAGC	1 cut(s)	1455
Bme1390I	CCNGG	4 cut(s)	483, 816, 1031, 1045
Bme18I	GGWCC	2 cut(s)	479, 542
BmeRI	GACNNNNNGTC	1 cut(s)	1230
BmeT110I	CYCGRG	4 cut(s)	509, 597, 762, 1835
BmgT120I	GGNCC	6 cut(s)	22, 479, 542, 656, 1524, 1820
BmiI	GGNNCC	3 cut(s)	23, 379, 657
BmrFI	CCNGG	4 cut(s)	483, 816, 1031, 1045
BmsI	GCATC	2 cut(s)	744, 1528
BpiI	GAAGAC	1 cut(s)	1580
BpmI	CTGGAG	1 cut(s)	1092
Bpu1102I	GCTNAGC	1 cut(s)	1455
BpuEI	CTTGAG	1 cut(s)	1016
BpuMI	CCSGG	1 cut(s)	1031
BsaHI	GRCGYC	1 cut(s)	66
BsaI	GGTCTC	2 cut(s)	1106, 1399
BsaJI	CCNNGG	8 cut(s)	25, 321, 586, 596, 815, 1030, 1043, 1683
BsaWI	WCCGGW	1 cut(s)	887
BsaXI	ACNNNNNCTCC	2 cut(s)	961, 991
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 1030, 1049
Bse118I	RCCGGY	3 cut(s)	4, 206, 887
Bse1I	ACTGG	2 cut(s)	481, 1552
Bse3DI	GCAATG	1 cut(s)	78
BseBI	CCWGG	3 cut(s)	483, 816, 1045
BseDI	CCNNGG	8 cut(s)	25, 321, 586, 596, 815, 1030, 1043, 1683
BseGI	GGATG	4 cut(s)	676, 1336, 1486, 1543
BseLI	CCNNNNNNNGG	3 cut(s)	93, 1030, 1049
BseMI	GCAATG	1 cut(s)	78
BseMII	CTCAG	2 cut(s)	348, 1469
BseNI	ACTGG	2 cut(s)	481, 1552
BseRI	GAGGAG	4 cut(s)	227, 339, 1337, 1340
BseSI	GKGCMC	1 cut(s)	1273
BseX3I	CGGCCG	1 cut(s)	204
BseXI	GCAGC	7 cut(s)	44, 181, 187, 200, 351, 594, 1728
BseYI	CCCAGC	1 cut(s)	406
Bsh1285I	CGRYCG	2 cut(s)	63, 207
BshTI	ACCGGT	1 cut(s)	887
BsiEI	CGRYCG	2 cut(s)	63, 207
BsiHKAI	GWGCWC	2 cut(s)	516, 1273
BsiHKCI	CYCGRG	4 cut(s)	509, 597, 762, 1835
BsiSI	CCGG	6 cut(s)	5, 69, 207, 888, 1030, 1647
BslFI	GGGAC	2 cut(s)	832, 1237
BslI	CCNNNNNNNGG	3 cut(s)	93, 1030, 1049
BsmAI	GTCTC	5 cut(s)	1005, 1106, 1110, 1399, 1838
BsmBI	CGTCTC	1 cut(s)	1110
BsmFI	GGGAC	2 cut(s)	832, 1237
BsmI	GAATGC	1 cut(s)	757
Bso31I	GGTCTC	2 cut(s)	1106, 1399
BsoBI	CYCGRG	4 cut(s)	509, 597, 762, 1835
Bsp1286I	GDGCHC	2 cut(s)	516, 1273
Bsp1407I	TGTACA	1 cut(s)	772
Bsp143I	GATC	4 cut(s)	60, 850, 991, 1383
Bsp1720I	GCTNAGC	1 cut(s)	1455
Bsp19I	CCATGG	1 cut(s)	586
BspCNI	CTCAG	2 cut(s)	349, 1468
BspLI	GGNNCC	3 cut(s)	23, 379, 657
BspMAI	CTGCAG	1 cut(s)	1809
BspPI	GGATC	1 cut(s)	1391
BspTNI	GGTCTC	2 cut(s)	1106, 1399
BsrBI	CCGCTC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	78
BsrFI	RCCGGY	3 cut(s)	4, 206, 887
BsrGI	TGTACA	1 cut(s)	772
BsrI	ACTGG	2 cut(s)	481, 1552
BssAI	RCCGGY	3 cut(s)	4, 206, 887
BssECI	CCNNGG	8 cut(s)	25, 321, 586, 596, 815, 1030, 1043, 1683
BssMI	GATC	4 cut(s)	60, 850, 991, 1383
BssNI	GRCGYC	1 cut(s)	66
BssT1I	CCWWGG	3 cut(s)	321, 586, 1683
Bst2UI	CCWGG	3 cut(s)	483, 816, 1045
Bst4CI	ACNGT	4 cut(s)	293, 370, 937, 1228
Bst6I	CTCTTC	2 cut(s)	357, 1343
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	1 cut(s)	194
BstAUI	TGTACA	1 cut(s)	772
BstC8I	GCNNGC	6 cut(s)	105, 617, 957, 1371, 1452, 1543
BstDEI	CTNAG	2 cut(s)	357, 1455
BstDSI	CCRYGG	2 cut(s)	25, 586
BstF5I	GGATG	4 cut(s)	676, 1336, 1486, 1543
BstKTI	GATC	4 cut(s)	63, 853, 994, 1386
BstMAI	GTCTC	5 cut(s)	1005, 1106, 1110, 1399, 1838
BstMBI	GATC	4 cut(s)	60, 850, 991, 1383
BstMCI	CGRYCG	2 cut(s)	63, 207
BstNI	CCWGG	3 cut(s)	483, 816, 1045
BstNSI	RCATGY	4 cut(s)	652, 899, 959, 1163
BstSCI	CCNGG	4 cut(s)	481, 814, 1029, 1043
BstSFI	CTRYAG	2 cut(s)	388, 1805
BstSLI	GKGCMC	1 cut(s)	1273
BstV1I	GCAGC	7 cut(s)	44, 181, 187, 200, 351, 594, 1728
BstV2I	GAAGAC	1 cut(s)	1580
BstXI	CCANNNNNNTGG	4 cut(s)	555, 666, 709, 1754
BstZI	CGGCCG	1 cut(s)	204
BtgI	CCRYGG	2 cut(s)	25, 586
BtsCI	GGATG	4 cut(s)	676, 1336, 1486, 1543
BtsI	GCAGTG	5 cut(s)	122, 342, 1504, 1619, 1802
BtsIMutI	CAGTG	9 cut(s)	122, 298, 342, 1393, 1504, 1545, 1619, 1642, 1802
Cac8I	GCNNGC	6 cut(s)	105, 617, 957, 1371, 1452, 1543
CaiI	CAGNNNCTG	3 cut(s)	194, 488, 1547
Cfr10I	RCCGGY	3 cut(s)	4, 206, 887
Cfr13I	GGNCC	6 cut(s)	22, 479, 542, 656, 1524, 1820
CseI	GACGC	1 cut(s)	74
Csp6I	GTAC	6 cut(s)	8, 602, 773, 810, 938, 1703
CspAI	ACCGGT	1 cut(s)	887
CspCI	CAANNNNNGTGG	2 cut(s)	1502, 1537
CviAII	CATG	6 cut(s)	587, 649, 776, 896, 956, 1160
CviQI	GTAC	6 cut(s)	8, 602, 773, 810, 938, 1703
DdeI	CTNAG	2 cut(s)	357, 1455
DpnI	GATC	4 cut(s)	62, 852, 993, 1385
DpnII	GATC	4 cut(s)	60, 850, 991, 1383
DriI	GACNNNNNGTC	1 cut(s)	1230
EaeI	YGGCCR	3 cut(s)	204, 699, 1799
EagI	CGGCCG	1 cut(s)	204
Eam1104I	CTCTTC	2 cut(s)	357, 1343
Eam1105I	GACNNNNNGTC	1 cut(s)	1230
EarI	CTCTTC	2 cut(s)	357, 1343
EciI	GGCGGA	1 cut(s)	251
EclXI	CGGCCG	1 cut(s)	204
Eco130I	CCWWGG	3 cut(s)	321, 586, 1683
Eco31I	GGTCTC	2 cut(s)	1106, 1399
Eco32I	GATATC	2 cut(s)	1055, 1246
Eco47I	GGWCC	2 cut(s)	479, 542
Eco52I	CGGCCG	1 cut(s)	204
Eco57I	CTGAAG	1 cut(s)	348
Eco88I	CYCGRG	4 cut(s)	509, 597, 762, 1835
EcoRII	CCWGG	3 cut(s)	481, 814, 1043
EcoRV	GATATC	2 cut(s)	1055, 1246
EcoT14I	CCWWGG	3 cut(s)	321, 586, 1683
EcoT22I	ATGCAT	1 cut(s)	759
ErhI	CCWWGG	3 cut(s)	321, 586, 1683
Esp3I	CGTCTC	1 cut(s)	1110
FaeI	CATG	6 cut(s)	590, 652, 779, 899, 959, 1163
FalI	AAGNNNNNCTT	4 cut(s)	404, 436, 1062, 1094
FaqI	GGGAC	2 cut(s)	832, 1237
FatI	CATG	6 cut(s)	586, 648, 775, 895, 955, 1159
FblI	GTMKAC	1 cut(s)	387
FokI	GGATG	4 cut(s)	683, 1343, 1493, 1550
FspBI	CTAG	4 cut(s)	860, 948, 1004, 1870
GsaI	CCCAGC	1 cut(s)	410
GsuI	CTGGAG	1 cut(s)	1092
HapII	CCGG	6 cut(s)	5, 69, 207, 888, 1030, 1647
HgaI	GACGC	1 cut(s)	74
Hin1I	GRCGYC	1 cut(s)	66
Hin1II	CATG	6 cut(s)	590, 652, 779, 899, 959, 1163
HindIII	AAGCTT	2 cut(s)	661, 1277
HinfI	GANTC	5 cut(s)	55, 178, 820, 998, 1074
HpaII	CCGG	6 cut(s)	5, 69, 207, 888, 1030, 1647
HphI	GGTGA	4 cut(s)	175, 221, 652, 1177
Hpy166II	GTNNAC	5 cut(s)	388, 604, 1133, 1168, 1271
Hpy188I	TCNGA	7 cut(s)	60, 183, 425, 929, 1404, 1581, 1854
Hpy188III	TCNNGA	6 cut(s)	356, 762, 824, 995, 1109, 1241
Hpy8I	GTNNAC	5 cut(s)	388, 604, 1133, 1168, 1271
Hpy99I	CGWCG	1 cut(s)	68
HpyCH4III	ACNGT	4 cut(s)	293, 370, 937, 1228
HpyCH4IV	ACGT	3 cut(s)	940, 1103, 1792
HpyCH4V	TGCA	9 cut(s)	534, 757, 955, 1086, 1199, 1271, 1541, 1640, 1807
HpyF3I	CTNAG	2 cut(s)	357, 1455
HpySE526I	ACGT	3 cut(s)	940, 1103, 1792
Hsp92I	GRCGYC	1 cut(s)	66
Hsp92II	CATG	6 cut(s)	590, 652, 779, 899, 959, 1163
Kzo9I	GATC	4 cut(s)	60, 850, 991, 1383
LmnI	GCTCC	6 cut(s)	29, 352, 485, 1582, 1609, 1649
Lsp1109I	GCAGC	7 cut(s)	44, 181, 187, 200, 351, 594, 1728
LweI	GCATC	2 cut(s)	744, 1528
MaeI	CTAG	4 cut(s)	860, 948, 1004, 1870
MaeII	ACGT	3 cut(s)	940, 1103, 1792
MaeIII	GTNAC	4 cut(s)	49, 364, 941, 1788
MalI	GATC	4 cut(s)	62, 852, 993, 1385
MbiI	CCGCTC	1 cut(s)	107
MboI	GATC	4 cut(s)	60, 850, 991, 1383
MhlI	GDGCHC	2 cut(s)	516, 1273
MlsI	TGGCCA	2 cut(s)	701, 1801
MluCI	AATT	6 cut(s)	535, 1148, 1192, 1353, 1516, 1845
MluNI	TGGCCA	2 cut(s)	701, 1801
MlyI	GAGTC	2 cut(s)	814, 1007
MmeI	TCCRAC	1 cut(s)	1604
Mox20I	TGGCCA	2 cut(s)	701, 1801
Mph1103I	ATGCAT	1 cut(s)	759
MroXI	GAANNNNTTC	1 cut(s)	798
MscI	TGGCCA	2 cut(s)	701, 1801
MseI	TTAA	5 cut(s)	231, 503, 1284, 1751, 1760
MslI	CAYNNNNRTG	6 cut(s)	553, 707, 780, 1431, 1752, 1828
Msp20I	TGGCCA	2 cut(s)	701, 1801
MspA1I	CMGCKG	1 cut(s)	191
MspI	CCGG	6 cut(s)	5, 69, 207, 888, 1030, 1647
MspR9I	CCNGG	4 cut(s)	483, 816, 1031, 1045
Mva1269I	GAATGC	1 cut(s)	757
MvaI	CCWGG	3 cut(s)	483, 816, 1045
NciI	CCSGG	1 cut(s)	1031
NcoI	CCATGG	1 cut(s)	586
NdeII	GATC	4 cut(s)	60, 850, 991, 1383
NlaIII	CATG	6 cut(s)	590, 652, 779, 899, 959, 1163
NlaIV	GGNNCC	3 cut(s)	23, 379, 657
NsiI	ATGCAT	1 cut(s)	759
NspI	RCATGY	4 cut(s)	652, 899, 959, 1163
OliI	CACNNNNGTG	1 cut(s)	553
PaeI	GCATGC	1 cut(s)	959
PaeR7I	CTCGAG	2 cut(s)	509, 762
PciI	ACATGT	2 cut(s)	648, 1159
PctI	GAATGC	1 cut(s)	757
PdmI	GAANNNNTTC	1 cut(s)	798
PfeI	GAWTC	3 cut(s)	55, 178, 1074
PinAI	ACCGGT	1 cut(s)	887
Ple19I	CGATCG	1 cut(s)	63
PleI	GAGTC	2 cut(s)	814, 1006
PpsI	GAGTC	2 cut(s)	814, 1006
PscI	ACATGT	2 cut(s)	648, 1159
PshBI	ATTAAT	1 cut(s)	1284
PsiI	TTATAA	1 cut(s)	1395
Psp6I	CCWGG	3 cut(s)	481, 814, 1043
PspFI	CCCAGC	1 cut(s)	406
PspGI	CCWGG	3 cut(s)	481, 814, 1043
PspN4I	GGNNCC	3 cut(s)	23, 379, 657
PspPI	GGNCC	6 cut(s)	22, 479, 542, 656, 1524, 1820
PspXI	VCTCGAGB	1 cut(s)	509
PstI	CTGCAG	1 cut(s)	1809
PstNI	CAGNNNCTG	3 cut(s)	194, 488, 1547
PvuI	CGATCG	1 cut(s)	63
RsaI	GTAC	6 cut(s)	9, 603, 774, 811, 939, 1704
RsaNI	GTAC	6 cut(s)	8, 602, 773, 810, 938, 1703
RseI	CAYNNNNRTG	6 cut(s)	553, 707, 780, 1431, 1752, 1828
SaqAI	TTAA	5 cut(s)	231, 503, 1284, 1751, 1760
Sau3AI	GATC	4 cut(s)	60, 850, 991, 1383
Sau96I	GGNCC	6 cut(s)	22, 479, 542, 656, 1524, 1820
SchI	GAGTC	2 cut(s)	814, 1007
ScrFI	CCNGG	4 cut(s)	483, 816, 1031, 1045
SduI	GDGCHC	2 cut(s)	516, 1273
SfaNI	GCATC	2 cut(s)	744, 1528
SfcI	CTRYAG	2 cut(s)	388, 1805
Sfr274I	CTCGAG	2 cut(s)	509, 762
SinI	GGWCC	2 cut(s)	479, 542
SlaI	CTCGAG	2 cut(s)	509, 762
SmiMI	CAYNNNNRTG	6 cut(s)	553, 707, 780, 1431, 1752, 1828
SmlI	CTYRAG	3 cut(s)	509, 762, 995
SmoI	CTYRAG	3 cut(s)	509, 762, 995
SphI	GCATGC	1 cut(s)	959
Sse9I	AATT	6 cut(s)	535, 1148, 1192, 1353, 1516, 1845
SspI	AATATT	1 cut(s)	744
SspMI	CTAG	4 cut(s)	860, 948, 1004, 1870
StyD4I	CCNGG	4 cut(s)	481, 814, 1029, 1043
StyI	CCWWGG	3 cut(s)	321, 586, 1683
TaaI	ACNGT	4 cut(s)	293, 370, 937, 1228
TaiI	ACGT	3 cut(s)	943, 1106, 1795
TaqI	TCGA	3 cut(s)	63, 510, 763
TaqII	GACCGA	1 cut(s)	1423
TasI	AATT	6 cut(s)	535, 1148, 1192, 1353, 1516, 1845
TatI	WGTACW	1 cut(s)	772
TauI	GCSGC	9 cut(s)	110, 113, 116, 119, 122, 194, 200, 206, 306
TfiI	GAWTC	3 cut(s)	55, 178, 1074
Tru1I	TTAA	5 cut(s)	231, 503, 1284, 1751, 1760
Tru9I	TTAA	5 cut(s)	231, 503, 1284, 1751, 1760
TscAI	CASTG	9 cut(s)	129, 298, 349, 1393, 1504, 1552, 1619, 1642, 1809
TseI	GCWGC	7 cut(s)	32, 188, 194, 200, 339, 582, 1716
TspDTI	ATGAA	6 cut(s)	299, 1197, 1350, 1427, 1584, 1656
TspRI	CASTG	9 cut(s)	129, 298, 349, 1393, 1504, 1552, 1619, 1642, 1809
VneI	GTGCAC	1 cut(s)	1269
VpaK11BI	GGWCC	2 cut(s)	479, 542
VspI	ATTAAT	1 cut(s)	1284
XapI	RAATTY	1 cut(s)	1516
XceI	RCATGY	4 cut(s)	652, 899, 959, 1163
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1377
XhoI	CTCGAG	2 cut(s)	509, 762
XmiI	GTMKAC	1 cut(s)	387
XmnI	GAANNNNTTC	1 cut(s)	798
XspI	CTAG	4 cut(s)	860, 948, 1004, 1870
Zsp2I	ATGCAT	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.