Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002179

Physical Location & Seq

Genomic Coordinates Reverse (-)

49928225 .. 49929580

Gene Structure 1356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0349600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGATATTAGAGAAATGCATAGGAGCTCAAAGATGTCGGAGGATCCAGCGAGCTCTCCGGCACGGCAAGGTCACAATCCTCTGCCTGGTCCTCACCGTGGTCGTCCTACGTGGCACAATCGGAGCCGGAAAGTTCGGCACCCCGGAGCAGGACTTCATCGAGATTCGCGACCACTTCTACTCCCGCAAGCGGGCGGAGCCCCACCGCGTCCTCGAGGAGGTCCAAACGACGTCGTCCGACGACGACCCCAACAACTACAACGCCTTCGACATCAACACGATCCTCAAGGACGAAGGCGAGGAGGAGAAACCCGACCCGAGTAAGCCCTACACTCTGGGACCCAAGATTTCAAATTGGGACGAGCAGAGATCGAAATGGCTGGAAAAGAACCCCAATTTCCCGAATTTCGTCGGGCCCAGCAAGCCCAGGGTGCTTCTGGTGACTGGGTCGTCGCCAAAACCCTGCGAGAACCCGGTAGGTGATCATTATCTGTTGAAGTCTATTAAGAACAAGATTGATTATTGTAGGTTGCACGGGATTGAGGTTTTCTACAATATGGCTCTTTTGGATGCTGAAATGGCTGGGTTTTGGGCCAAGCTTCCGCTGATTCGGAAGCTGCTTTTGTCTCACCCGGAAGTCGAGTTTCTGTGGTGGATGGATAGTGATGCTATGTTCACAGATATGGCTTTCGAGTTGCCTTGGGAGAGGTACAAAGATTCCAACTTTGTGATGCATGGCTGGAATGAGATGGTTTATGATGACAAGAATTGGATTGGATTGAATACCGGTAGCTTTTTGTTGAGGAATTGCCAGTGGTCTTTGGACATGCTTGATGCTTGGGCTCCAATGGGGCCGAAAGGAAAGGTTAGGGATGAGGCTGGGAAGATATTGACTAGCGCACTTAAGAATAGGCCGGTGTTTGAAGCTGACGATCAGTCGGCTATGGTTTATATATTGGCTACTCAGAGGGAGAAGTGGGGTGATAAGGTTTATCTCGAGAATGCGTATTATTTACATGGTTATTGGGGGATTTTGGTTGATAGATATGAGGAAATGATTGAGAATTATCATCCTGGTTTGGGTGATCATCGTTGGCCGCTAGTGACACATTTTGTGGGTTGCAAGCCGTGTGGGAAGTTTGGAGATTACCCAGTTGAGAGATGTTTGAAGCAGATGGACAGGGCTTTTAACTTTGGTGATAATCAGGTTCTTCAAATCTATGGATTCACACACAAGTCCTTGGCTAGTAGACGAGTTAAGAGAGTTCGAAATGAAACGAGCAAGCCACTTAAGGTTAAAGATGAACTCGGGTTGCTTCATCCTGCGTTTAAGGCTGTTAAGGTATCATCTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030100 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0060627 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0098657 GO:0140096 GO:1901265 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

451

Amino Acids

52.13

Weight (kDa)

7.97

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_34	PF05637	141 - 380	6.3e-66	galactosyl transferase GMA12/MNN10 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25760 AT2G25760
fragaria_vesca	FvH4_2g35440 FvH4_2g35440 FvH4_6g32280
malus_domestica	MD08G1111700.v1.1 MD09G1204700.v1.1 MD15G1091200.v1.1 MD17G1184900.v1.1
prunus_persica	Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.3G060400_v2.0.a1 Prupe.3G060400_v2.0.a1
pyrus_communis	pycom08g09280 pycom09g12160 pycom15g08520 pycom17g19440
rosa_chinensis	RchiOBHm_Chr2g0140231 RchiOBHm_Chr6g0306451
rosa_laevigata	RLG00000004784 RLG00000008671 RLG00000010797 RLG00000019857
rosa_multiflora	Rmu_sc0002971.1_g000017 Rmu_sc0005446.1_g000008
rosa_roxburghii	Rroxscaffold_2G00104970 Rroxscaffold_7G00161760
rosa_rugosa	Rorug02G0361500 Rorug06G0349500 Rorug06G0349600
rosa_samantha	Rh2AG412400 Rh2BG422700 Rh2CG398600 Rh6AG461700 Rh6BG439300 Rh6CG475800 Rh6DG462500
rosa_wichuraiana	Rw2G033800 Rw6G040240 Rw7G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	448
AatII	GACGTC	1 cut(s)	233
AbsI	CCTCGAGG	1 cut(s)	212
AccB1I	GGYRCC	1 cut(s)	137
AccI	GTMKAC	1 cut(s)	1249
AccII	CGCG	2 cut(s)	168, 207
AciI	CCGC	6 cut(s)	184, 190, 194, 205, 602, 1097
AclWI	GGATC	3 cut(s)	37, 50, 274
AcoI	YGGCCR	1 cut(s)	1094
AcsI	RAATTY	1 cut(s)	403
AcyI	GRCGYC	1 cut(s)	230
AfaI	GTAC	1 cut(s)	710
AfiI	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1079
AflII	CTTAAG	2 cut(s)	902, 1289
AgeI	ACCGGT	1 cut(s)	785
AgsI	TTSAA	6 cut(s)	351, 496, 781, 923, 1168, 1214
AhdI	GACNNNNNGTC	1 cut(s)	934
AjnI	CCWGG	3 cut(s)	84, 425, 1072
AluBI	AGCT	6 cut(s)	26, 53, 598, 616, 792, 926
AluI	AGCT	6 cut(s)	26, 53, 598, 616, 792, 926
Alw21I	GWGCWC	2 cut(s)	28, 55
Alw26I	GTCTC	1 cut(s)	630
AlwI	GGATC	3 cut(s)	37, 50, 274
Ama87I	CYCGRG	4 cut(s)	212, 316, 995, 1307
AoxI	GGCC	5 cut(s)	413, 591, 851, 911, 1094
ApaI	GGGCCC	1 cut(s)	417
ApeKI	GCWGC	1 cut(s)	616
ApoI	RAATTY	1 cut(s)	403
AsiGI	ACCGGT	1 cut(s)	785
AspLEI	GCGC	1 cut(s)	899
AspS9I	GGNCC	7 cut(s)	88, 220, 338, 413, 414, 591, 851
AsuC2I	CCSGG	3 cut(s)	143, 473, 632
AsuHPI	GGTGA	7 cut(s)	85, 451, 491, 620, 992, 1094, 1208
AsuII	TTCGAA	1 cut(s)	1267
AvaI	CYCGRG	4 cut(s)	212, 316, 995, 1307
AvaII	GGWCC	3 cut(s)	88, 220, 338
BaeGI	GKGCMC	1 cut(s)	417
BamHI	GGATCC	1 cut(s)	42
BanI	GGYRCC	1 cut(s)	137
BanII	GRGCYC	5 cut(s)	28, 55, 201, 417, 844
Bbv12I	GWGCWC	2 cut(s)	28, 55
BbvI	GCAGC	1 cut(s)	603
BccI	CCATC	3 cut(s)	649, 742, 1168
BceAI	ACGGC	2 cut(s)	79, 1111
BciT130I	CCWGG	3 cut(s)	86, 427, 1074
BclI	TGATCA	2 cut(s)	481, 1084
BcnI	CCSGG	3 cut(s)	143, 473, 632
BcoDI	GTCTC	1 cut(s)	630
BfaI	CTAG	4 cut(s)	894, 1100, 1245, 1354
BfrI	CTTAAG	2 cut(s)	902, 1289
BisI	GCNGC	2 cut(s)	617, 1097
BlsI	GCNGC	2 cut(s)	618, 1098
Bme1390I	CCNGG	6 cut(s)	86, 143, 427, 473, 632, 1074
Bme18I	GGWCC	3 cut(s)	88, 220, 338
BmeRI	GACNNNNNGTC	1 cut(s)	934
BmeT110I	CYCGRG	4 cut(s)	212, 316, 995, 1307
BmgT120I	GGNCC	7 cut(s)	88, 220, 338, 413, 414, 591, 851
BmiI	GGNNCC	9 cut(s)	44, 124, 139, 198, 339, 340, 415, 843, 852
BmrFI	CCNGG	6 cut(s)	86, 143, 427, 473, 632, 1074
BmrI	ACTGGG	2 cut(s)	453, 1145
BmsI	GCATC	4 cut(s)	559, 655, 720, 823
BmuI	ACTGGG	2 cut(s)	453, 1145
Bpu14I	TTCGAA	1 cut(s)	1267
BpuEI	CTTGAG	1 cut(s)	269
BpuMI	CCSGG	3 cut(s)	143, 473, 632
BsaAI	YACGTR	1 cut(s)	110
BsaBI	GATNNNNATC	1 cut(s)	486
BsaHI	GRCGYC	1 cut(s)	230
BsaJI	CCNNGG	6 cut(s)	96, 141, 425, 426, 698, 1239
BsaWI	WCCGGW	1 cut(s)	785
BsaXI	ACNNNNNCTCC	2 cut(s)	164, 194
Bsc4I	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1079
Bse118I	RCCGGY	2 cut(s)	785, 913
Bse1I	ACTGG	3 cut(s)	448, 811, 1151
Bse8I	GATNNNNATC	1 cut(s)	486
BseBI	CCWGG	3 cut(s)	86, 427, 1074
BseDI	CCNNGG	6 cut(s)	96, 141, 425, 426, 698, 1239
BseGI	GGATG	5 cut(s)	574, 660, 877, 1069, 1318
BseJI	GATNNNNATC	1 cut(s)	486
BseLI	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1079
BseMII	CTCAG	1 cut(s)	977
BseNI	ACTGG	3 cut(s)	448, 811, 1151
BseRI	GAGGAG	3 cut(s)	230, 314, 317
BseSI	GKGCMC	1 cut(s)	417
BseXI	GCAGC	1 cut(s)	603
BseYI	CCCAGC	3 cut(s)	416, 581, 878
Bsh1236I	CGCG	2 cut(s)	168, 207
BshFI	GGCC	5 cut(s)	415, 593, 853, 913, 1096
BshNI	GGYRCC	1 cut(s)	137
BshTI	ACCGGT	1 cut(s)	785
BsiHKAI	GWGCWC	2 cut(s)	28, 55
BsiHKCI	CYCGRG	4 cut(s)	212, 316, 995, 1307
BsiSI	CCGG	7 cut(s)	58, 126, 143, 473, 632, 786, 914
BslFI	GGGAC	2 cut(s)	351, 371
BslI	CCNNNNNNNGG	7 cut(s)	85, 97, 148, 189, 190, 217, 1079
BsmAI	GTCTC	1 cut(s)	630
BsmFI	GGGAC	2 cut(s)	351, 371
BsmI	GAATGC	1 cut(s)	1006
BsnI	GGCC	5 cut(s)	415, 593, 853, 913, 1096
BsoBI	CYCGRG	4 cut(s)	212, 316, 995, 1307
Bsp119I	TTCGAA	1 cut(s)	1267
Bsp120I	GGGCCC	1 cut(s)	413
Bsp1286I	GDGCHC	5 cut(s)	28, 55, 201, 417, 844
Bsp143I	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
Bsp68I	TCGCGA	1 cut(s)	168
BspACI	CCGC	6 cut(s)	184, 190, 194, 205, 602, 1097
BspANI	GGCC	5 cut(s)	415, 593, 853, 913, 1096
BspCNI	CTCAG	1 cut(s)	976
BspFNI	CGCG	2 cut(s)	168, 207
BspLI	GGNNCC	9 cut(s)	44, 124, 139, 198, 339, 340, 415, 843, 852
BspPI	GGATC	3 cut(s)	37, 50, 274
BspT104I	TTCGAA	1 cut(s)	1267
BspT107I	GGYRCC	1 cut(s)	137
BspTI	CTTAAG	2 cut(s)	902, 1289
BsrFI	RCCGGY	2 cut(s)	785, 913
BsrI	ACTGG	3 cut(s)	448, 811, 1151
BssAI	RCCGGY	2 cut(s)	785, 913
BssECI	CCNNGG	6 cut(s)	96, 141, 425, 426, 698, 1239
BssMI	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
BssNI	GRCGYC	1 cut(s)	230
BssT1I	CCWWGG	2 cut(s)	698, 1239
Bst2UI	CCWGG	3 cut(s)	86, 427, 1074
Bst4CI	ACNGT	1 cut(s)	97
BstACI	GRCGYC	1 cut(s)	230
BstAFI	CTTAAG	2 cut(s)	902, 1289
BstBAI	YACGTR	1 cut(s)	110
BstBI	TTCGAA	1 cut(s)	1267
BstC8I	GCNNGC	6 cut(s)	51, 188, 192, 422, 1124, 1283
BstDEI	CTNAG	1 cut(s)	963
BstDSI	CCRYGG	1 cut(s)	96
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	5 cut(s)	574, 660, 877, 1069, 1318
BstFNI	CGCG	2 cut(s)	168, 207
BstHHI	GCGC	1 cut(s)	899
BstKTI	GATC	6 cut(s)	45, 282, 371, 484, 934, 1087
BstMAI	GTCTC	1 cut(s)	630
BstMBI	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
BstMWI	GCNNNNNNNGC	5 cut(s)	196, 421, 430, 578, 1331
BstNI	CCWGG	3 cut(s)	86, 427, 1074
BstNSI	RCATGY	1 cut(s)	829
BstSCI	CCNGG	6 cut(s)	84, 141, 425, 471, 630, 1072
BstSLI	GKGCMC	1 cut(s)	417
BstUI	CGCG	2 cut(s)	168, 207
BstV1I	GCAGC	1 cut(s)	603
BstX2I	RGATCY	1 cut(s)	42
BstYI	RGATCY	1 cut(s)	42
BsuRI	GGCC	5 cut(s)	415, 593, 853, 913, 1096
BtgI	CCRYGG	1 cut(s)	96
BtsCI	GGATG	5 cut(s)	574, 660, 877, 1069, 1318
BtsIMutI	CAGTG	1 cut(s)	818
BtuMI	TCGCGA	1 cut(s)	168
Cac8I	GCNNGC	6 cut(s)	51, 188, 192, 422, 1124, 1283
CfoI	GCGC	1 cut(s)	899
Cfr10I	RCCGGY	2 cut(s)	785, 913
Cfr13I	GGNCC	7 cut(s)	88, 220, 338, 413, 414, 591, 851
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	1 cut(s)	709
CspAI	ACCGGT	1 cut(s)	785
CspCI	CAANNNNNGTGG	2 cut(s)	1111, 1146
CviAII	CATG	3 cut(s)	734, 826, 1016
CviQI	GTAC	1 cut(s)	709
DdeI	CTNAG	1 cut(s)	963
DpnI	GATC	6 cut(s)	44, 281, 370, 483, 933, 1086
DpnII	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
DrdI	GACNNNNNNGTC	1 cut(s)	448
DriI	GACNNNNNGTC	1 cut(s)	934
DseDI	GACNNNNNNGTC	1 cut(s)	448
EaeI	YGGCCR	1 cut(s)	1094
Eam1105I	GACNNNNNGTC	1 cut(s)	934
EciI	GGCGGA	1 cut(s)	209
Ecl136II	GAGCTC	2 cut(s)	26, 53
Eco130I	CCWWGG	2 cut(s)	698, 1239
Eco24I	GRGCYC	5 cut(s)	28, 55, 201, 417, 844
Eco47I	GGWCC	3 cut(s)	88, 220, 338
Eco53kI	GAGCTC	2 cut(s)	26, 53
Eco88I	CYCGRG	4 cut(s)	212, 316, 995, 1307
EcoICRI	GAGCTC	2 cut(s)	26, 53
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	1 cut(s)	338
EcoRII	CCWGG	3 cut(s)	84, 425, 1072
EcoT14I	CCWWGG	2 cut(s)	698, 1239
EcoT22I	ATGCAT	2 cut(s)	20, 735
EcoT38I	GRGCYC	5 cut(s)	28, 55, 201, 417, 844
ErhI	CCWWGG	2 cut(s)	698, 1239
FaeI	CATG	3 cut(s)	737, 829, 1019
FaqI	GGGAC	2 cut(s)	351, 371
FatI	CATG	3 cut(s)	733, 825, 1015
FauI	CCCGC	2 cut(s)	183, 191
FbaI	TGATCA	2 cut(s)	481, 1084
FblI	GTMKAC	1 cut(s)	1249
Fnu4HI	GCNGC	2 cut(s)	617, 1097
FokI	GGATG	5 cut(s)	581, 667, 884, 1056, 1305
FriOI	GRGCYC	5 cut(s)	28, 55, 201, 417, 844
Fsp4HI	GCNGC	2 cut(s)	617, 1097
FspBI	CTAG	4 cut(s)	894, 1100, 1245, 1354
GlaI	GCGC	1 cut(s)	898
GluI	GCNGC	2 cut(s)	617, 1097
GsaI	CCCAGC	3 cut(s)	420, 585, 882
HaeIII	GGCC	5 cut(s)	415, 593, 853, 913, 1096
HapII	CCGG	7 cut(s)	58, 126, 143, 473, 632, 786, 914
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	1 cut(s)	899
Hin1I	GRCGYC	1 cut(s)	230
Hin1II	CATG	3 cut(s)	737, 829, 1019
Hin6I	GCGC	1 cut(s)	897
HinP1I	GCGC	1 cut(s)	897
HindIII	AAGCTT	1 cut(s)	596
HinfI	GANTC	4 cut(s)	163, 607, 716, 1224
HpaII	CCGG	7 cut(s)	58, 126, 143, 473, 632, 786, 914
HphI	GGTGA	7 cut(s)	85, 451, 491, 620, 992, 1094, 1208
Hpy166II	GTNNAC	2 cut(s)	675, 1250
Hpy188I	TCNGA	5 cut(s)	39, 122, 238, 612, 966
Hpy188III	TCNNGA	5 cut(s)	160, 167, 400, 995, 997
Hpy8I	GTNNAC	2 cut(s)	675, 1250
Hpy99I	CGWCG	6 cut(s)	232, 235, 242, 245, 413, 454
HpyAV	CCTTC	2 cut(s)	274, 287
HpyCH4III	ACNGT	1 cut(s)	97
HpyCH4IV	ACGT	2 cut(s)	109, 230
HpyCH4V	TGCA	4 cut(s)	18, 532, 733, 1122
HpyF10VI	GCNNNNNNNGC	5 cut(s)	196, 421, 430, 578, 1331
HpyF3I	CTNAG	1 cut(s)	963
HpySE526I	ACGT	2 cut(s)	109, 230
Hsp92I	GRCGYC	1 cut(s)	230
Hsp92II	CATG	3 cut(s)	737, 829, 1019
HspAI	GCGC	1 cut(s)	897
KflI	GGGWCCC	1 cut(s)	338
Ksp22I	TGATCA	2 cut(s)	481, 1084
Kzo9I	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
LmnI	GCTCC	5 cut(s)	23, 122, 145, 196, 847
Lsp1109I	GCAGC	1 cut(s)	603
LweI	GCATC	4 cut(s)	559, 655, 720, 823
MaeI	CTAG	4 cut(s)	894, 1100, 1245, 1354
MaeII	ACGT	2 cut(s)	109, 230
MaeIII	GTNAC	3 cut(s)	70, 439, 1102
MalI	GATC	6 cut(s)	44, 281, 370, 483, 933, 1086
MboI	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
MboII	GAAGA	3 cut(s)	895, 1202, 1341
MflI	RGATCY	1 cut(s)	42
MhlI	GDGCHC	5 cut(s)	28, 55, 201, 417, 844
MluCI	AATT	6 cut(s)	352, 394, 403, 766, 805, 1063
MmeI	TCCRAC	3 cut(s)	17, 261, 744
Mph1103I	ATGCAT	2 cut(s)	20, 735
MseI	TTAA	8 cut(s)	504, 903, 1188, 1257, 1290, 1296, 1329, 1338
MslI	CAYNNNNRTG	1 cut(s)	680
MspA1I	CMGCKG	1 cut(s)	604
MspCI	CTTAAG	2 cut(s)	902, 1289
MspI	CCGG	7 cut(s)	58, 126, 143, 473, 632, 786, 914
MspR9I	CCNGG	6 cut(s)	86, 143, 427, 473, 632, 1074
Mva1269I	GAATGC	1 cut(s)	1006
MvaI	CCWGG	3 cut(s)	86, 427, 1074
MvnI	CGCG	2 cut(s)	168, 207
MwoI	GCNNNNNNNGC	5 cut(s)	196, 421, 430, 578, 1331
NciI	CCSGG	3 cut(s)	143, 473, 632
NdeII	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
NlaIII	CATG	3 cut(s)	737, 829, 1019
NlaIV	GGNNCC	9 cut(s)	44, 124, 139, 198, 339, 340, 415, 843, 852
NmuCI	GTSAC	3 cut(s)	70, 439, 1102
NruI	TCGCGA	1 cut(s)	168
NsiI	ATGCAT	2 cut(s)	20, 735
NspI	RCATGY	1 cut(s)	829
NspV	TTCGAA	1 cut(s)	1267
PaeR7I	CTCGAG	2 cut(s)	212, 995
PasI	CCCWGGG	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PctI	GAATGC	1 cut(s)	1006
PfeI	GAWTC	4 cut(s)	163, 607, 716, 1224
PflFI	GACNNNGTC	2 cut(s)	232, 445
PinAI	ACCGGT	1 cut(s)	785
PkrI	GCNGC	2 cut(s)	618, 1098
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	1 cut(s)	338
Psp124BI	GAGCTC	2 cut(s)	28, 55
Psp5II	RGGWCCY	1 cut(s)	338
Psp6I	CCWGG	3 cut(s)	84, 425, 1072
PspFI	CCCAGC	3 cut(s)	416, 581, 878
PspGI	CCWGG	3 cut(s)	84, 425, 1072
PspN4I	GGNNCC	9 cut(s)	44, 124, 139, 198, 339, 340, 415, 843, 852
PspOMI	GGGCCC	1 cut(s)	413
PspPI	GGNCC	7 cut(s)	88, 220, 338, 413, 414, 591, 851
PspPPI	RGGWCCY	1 cut(s)	338
PspXI	VCTCGAGB	1 cut(s)	212
PsuI	RGATCY	1 cut(s)	42
PsyI	GACNNNGTC	2 cut(s)	232, 445
RruI	TCGCGA	1 cut(s)	168
RsaI	GTAC	1 cut(s)	710
RsaNI	GTAC	1 cut(s)	709
RseI	CAYNNNNRTG	1 cut(s)	680
SacI	GAGCTC	2 cut(s)	28, 55
SaqAI	TTAA	8 cut(s)	504, 903, 1188, 1257, 1290, 1296, 1329, 1338
SatI	GCNGC	2 cut(s)	617, 1097
Sau3AI	GATC	6 cut(s)	42, 279, 368, 481, 931, 1084
Sau96I	GGNCC	7 cut(s)	88, 220, 338, 413, 414, 591, 851
ScrFI	CCNGG	6 cut(s)	86, 143, 427, 473, 632, 1074
SduI	GDGCHC	5 cut(s)	28, 55, 201, 417, 844
SfaNI	GCATC	4 cut(s)	559, 655, 720, 823
Sfr274I	CTCGAG	2 cut(s)	212, 995
SfuI	TTCGAA	1 cut(s)	1267
SinI	GGWCC	3 cut(s)	88, 220, 338
SlaI	CTCGAG	2 cut(s)	212, 995
SmiMI	CAYNNNNRTG	1 cut(s)	680
SmlI	CTYRAG	5 cut(s)	212, 284, 902, 995, 1289
SmoI	CTYRAG	5 cut(s)	212, 284, 902, 995, 1289
Sse9I	AATT	6 cut(s)	352, 394, 403, 766, 805, 1063
SsiI	CCGC	6 cut(s)	184, 190, 194, 205, 602, 1097
SspMI	CTAG	4 cut(s)	894, 1100, 1245, 1354
SstI	GAGCTC	2 cut(s)	28, 55
StyD4I	CCNGG	6 cut(s)	84, 141, 425, 471, 630, 1072
StyI	CCWWGG	2 cut(s)	698, 1239
TaaI	ACNGT	1 cut(s)	97
TaiI	ACGT	2 cut(s)	112, 233
TaqI	TCGA	8 cut(s)	159, 213, 267, 371, 639, 690, 996, 1267
TasI	AATT	6 cut(s)	352, 394, 403, 766, 805, 1063
TauI	GCSGC	1 cut(s)	1099
TfiI	GAWTC	4 cut(s)	163, 607, 716, 1224
Tru1I	TTAA	8 cut(s)	504, 903, 1188, 1257, 1290, 1296, 1329, 1338
Tru9I	TTAA	8 cut(s)	504, 903, 1188, 1257, 1290, 1296, 1329, 1338
TscAI	CASTG	1 cut(s)	818
TseFI	GTSAC	3 cut(s)	70, 439, 1102
TseI	GCWGC	1 cut(s)	616
Tsp45I	GTSAC	3 cut(s)	70, 439, 1102
TspDTI	ATGAA	4 cut(s)	145, 1287, 1307, 1317
TspRI	CASTG	1 cut(s)	818
Tth111I	GACNNNGTC	2 cut(s)	232, 445
Vha464I	CTTAAG	2 cut(s)	902, 1289
VpaK11BI	GGWCC	3 cut(s)	88, 220, 338
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	1 cut(s)	403
XceI	RCATGY	1 cut(s)	829
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XhoI	CTCGAG	2 cut(s)	212, 995
XmiI	GTMKAC	1 cut(s)	1249
XspI	CTAG	4 cut(s)	894, 1100, 1245, 1354
ZraI	GACGTC	1 cut(s)	231
Zsp2I	ATGCAT	2 cut(s)	20, 735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.