Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002179

Physical Location & Seq

Genomic Coordinates Forward (+)

4416249 .. 4422646

Gene Structure 6398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010797

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGCCTGAGCTCCGCCGCAGAAATCGGACCCCTAAAAAACCCGACCCGAACCCGAACCCGATTACCCGAAGGGCCGCACTGAGGAAGACGAATTGTGGTCAAATTAAAAAGAGTAGGAATAATCGGAAGAAGAAGAGCGGTCCGGTACTCGAAACGAGGTCGTTTCAGTTGAAGGAACACCAGGTTAGGGATTTCAGAGCCATGGATGAGTACGATAGCGGTGGCCGCAGCGGCGATAAGGGTCCGGTAGCTGAGGAAGAAATCTCAGCTCCTATTCCTGACAAGGTCCAGGTTGGTGGTTCCCCGCTGTACAAAGTAGAGAGGAAATTGGGGAAAGGAGGCTTTGGACAAGTATATGTTGGCCGGCGCACTGCACCCGGCCCTGGAGCTATTGAGGTTGCCTTGAAATTTGAGCATAGAAGCAGTAAAGGATGTAATTATGGCCCACCATATGAGTGGCAAATTTACAATGCACTTGGTGGTAGTCATGGAGTTCCAAGAGTTCATTATAAGGGCCGGCAAGCTGACTACTATATCATGGTTATGGATATTCTTGGGCCTAGTTTGTGGGATGTCTGGAATAACAGCTCGCACACAATGTCAATTGAAATGGTTGCATGTATTGCCATTGAGGCAATTTCCATATTGGAGAAGATGCACTCTAGAGGATATGTGCATGGAGATGTGAAACCTGAGAACTTTTTGCTTGGTCCACCTGGAACTCCTGAGGAGAAGAAGCTATTCCTCGTTGACCTTGGATTAGCCACCAGGTGGCGAGATAGTTCAACTGGCCTGCATGTAGATTATGATCAACGTCCAGATGTTTTCAGGGGAACTGTGCGGTATGCAAGTGTGCATGCTCATCTTGGGAGAACTGGTAGCAGGAGAGATGACTTGGAATCTTTAGCTTACACATTGATATTTCTTCTCCGTGGGCGGTTACCTTGGCAAGGATACCAGTTTGATGAAGAACCGAACTATGCAAAATATATATCCCTTTTTGATGGAGTTGTTGGTCCAAATCCAGATATTAGACCAATAAACACTGATGGTGCTCAGAAGCTTATATGTCAGGTTGGACAAAAGAGAGGGCGATTAACCATGGAGGAAGAGGACGACGAGCAGCCAAAGAAGAAAATTCGCATGGGGATGCCGGCAACACAATGGATTAGTGTTTACAATGCTCGTAGGCCTATGAAGCAAAGATATCACTACAATGTGGCAGATGTGAGGCTTTCCCAACATATTGAGAAAGGAAATGAAGATGGGTTGTTTATCAGCAGTGTGGCTTCCTGTTCAAATCTTTGGGCTCTCATTATGGATGCTGGAACTGGATTCAGTTCCCAAGTTTATGAACTCTCTCCATTTTTTCTCCACAAGGAATGGATCATGGAACAATGGGACAAAAATTACTATATCAGCGCAATAGCAGGAGCTAACAATGGAAGCTCTTTGGTTGTAATGTCTAAAGGGACCTCATTCTTACAGCAGTCCTATAAAGTCAGCGAGTCATTTCCTTTCAAGTGGATTAATAAAAAATGGAGGGAAGGATTTTATGTTACTGCGATGGCCACTGCAGGGAGTAGATGGGCTATTGTTATGTCGCGGGGTGCAGGATTTTCTGACCAGGTTGTAGAACTAGATTTTCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAGTGGTTACCGCATCACGTCAACTGCAGCAACTTGGGATCAGGCAGCTCTCGTTCTTAGTGTTCCAAGGAGAAAACCTGCTGATGAAACACAAGAGACTCTTCGAACCTCTGCTTTTCCAAGTACACATGTGAAGCTATGTGTTTCATCATTGACTGGCTATTGGTTTAACTGGACAACACGGCACTCAGTTCAGTTTTGTATGCTAGAACTGGTATTAAGAAAAGCTGGAATGTGTGGCTTTGGGAGGGAAGTTTATAGTTTATACAGTGAAAGTTTGTTTGTAGCTCTGACTCTTAGATATCCATCTAGTGATACTATTGGAGAGTTGTTAAAACGTGAACACGAGACTGAAGTGATTCAATCTGGCTGCACTGGTCATGGCTTTAAAGAGGACAAACCCAAGACGAACATGAGGCATCTTGTTCAATTGGGGAGCTGCCGTCCAATATTTCATAAGCATTCGATGAGCGCCTGCCAACAAGATCCATACAAATGCAAATCTATAGCGACGAGGGCGACATCGATGCCGCGTCAACCATTGTTGGACGACATGTCCCAAACGCCTCCTTCCTTGGTGGCTTTGCTCAAGGCGTTGCATCTGGAATTGCTCCGCAGAGCTACACGTACACAGACCATGTCAGTTACCGATGTCGCACATGGCGAGTTAGAGTTCGGAGAGTTGACGTGGACCGATGACAAACACGTCGTTTCTTCTGCCATTACAGTTCGCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0030100 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0035639 GO:0036094 GO:0036211 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0060627 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0098657 GO:0140096 GO:1901265 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

807

Amino Acids

91.19

Weight (kDa)

9.26

Isoelectric Point (pI)

48.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	104 - 322	1.3e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	105 - 259	3.4e-06	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	203 - 308	4.3e-07	Fungal protein kinase
DUF7477	PF24289	358 - 606	2.2e-152	Domain of unknown function (DUF7477)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25760 AT2G25760
fragaria_vesca	FvH4_2g35440 FvH4_2g35440 FvH4_6g32280
malus_domestica	MD08G1111700.v1.1 MD09G1204700.v1.1 MD15G1091200.v1.1 MD17G1184900.v1.1
prunus_persica	Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.1G445600_v2.0.a1 Prupe.3G060400_v2.0.a1 Prupe.3G060400_v2.0.a1
pyrus_communis	pycom08g09280 pycom09g12160 pycom15g08520 pycom17g19440
rosa_chinensis	RchiOBHm_Chr2g0140231 RchiOBHm_Chr6g0306451
rosa_laevigata	RLG00000004784 RLG00000008671 RLG00000010797 RLG00000019857
rosa_multiflora	Rmu_sc0002971.1_g000017 Rmu_sc0005446.1_g000008
rosa_roxburghii	Rroxscaffold_2G00104970 Rroxscaffold_7G00161760
rosa_rugosa	Rorug02G0361500 Rorug06G0349500 Rorug06G0349600
rosa_samantha	Rh2AG412400 Rh2BG422700 Rh2CG398600 Rh6AG461700 Rh6BG439300 Rh6CG475800 Rh6DG462500
rosa_wichuraiana	Rw2G033800 Rw6G040240 Rw7G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	510
AasI	GACNNNNNNGTC	1 cut(s)	2387
Acc36I	ACCTGC	1 cut(s)	1768
AccB7I	CCANNNNNTGG	1 cut(s)	771
AccBSI	CCGCTC	1 cut(s)	138
AccII	CGCG	2 cut(s)	1606, 2215
AclWI	GGATC	3 cut(s)	1394, 1728, 2162
AcoI	YGGCCR	3 cut(s)	223, 361, 1569
AcsI	RAATTY	3 cut(s)	407, 462, 1137
AcuI	CTGAAG	1 cut(s)	2055
AdeI	CACNNNGTG	2 cut(s)	479, 771
AfaI	GTAC	5 cut(s)	147, 212, 311, 1807, 2311
AfiI	CCNNNNNNNGG	7 cut(s)	81, 187, 383, 771, 950, 1578, 1661
AflIII	ACRYGT	4 cut(s)	1810, 2235, 2306, 2386
AgsI	TTSAA	8 cut(s)	172, 406, 608, 786, 1299, 1522, 2045, 2111
AhdI	GACNNNNNGTC	1 cut(s)	2236
AjiI	CACGTC	3 cut(s)	1701, 2370, 2389
AjnI	CCWGG	6 cut(s)	180, 288, 382, 715, 767, 1626
Alw21I	GWGCWC	2 cut(s)	12, 1057
Alw26I	GTCTC	2 cut(s)	1772, 2024
AlwI	GGATC	3 cut(s)	1394, 1728, 2162
ApeKI	GCWGC	6 cut(s)	228, 1123, 1709, 1727, 2052, 2121
ApoI	RAATTY	3 cut(s)	407, 462, 1137
AseI	ATTAAT	1 cut(s)	1530
Asp700I	GAANNNNTTC	3 cut(s)	740, 1665, 2040
AspLEI	GCGC	3 cut(s)	369, 1424, 2156
AsuC2I	CCSGG	1 cut(s)	378
AsuII	TTCGAA	1 cut(s)	1786
AvaII	GGWCC	8 cut(s)	27, 140, 242, 286, 710, 1016, 1473, 2373
AxyI	CCTNAGG	1 cut(s)	726
BalI	TGGCCA	1 cut(s)	1571
BanII	GRGCYC	2 cut(s)	12, 1312
BauI	CACGAG	1 cut(s)	2027
BbsI	GAAGAC	1 cut(s)	92
Bbv12I	GWGCWC	2 cut(s)	12, 1057
BbvCI	CCTCAGC	1 cut(s)	252
BbvI	GCAGC	6 cut(s)	240, 1135, 1721, 1739, 2039, 2108
BccI	CCATC	6 cut(s)	998, 1043, 1259, 1561, 1581, 1996
BceAI	ACGGC	2 cut(s)	1880, 2109
BcgI	CGANNNNNNTGC	2 cut(s)	2191, 2225
BciT130I	CCWGG	6 cut(s)	182, 290, 384, 717, 769, 1628
BciVI	GTATCC	2 cut(s)	947, 1662
BclI	TGATCA	1 cut(s)	808
BcnI	CCSGG	1 cut(s)	378
BcoDI	GTCTC	2 cut(s)	1772, 2024
BfaI	CTAG	6 cut(s)	561, 663, 1640, 1656, 1889, 1992
BfmI	CTRYAG	3 cut(s)	1575, 1707, 2187
BfoI	RGCGCY	1 cut(s)	2157
BfuAI	ACCTGC	1 cut(s)	1768
BfuI	GTATCC	2 cut(s)	947, 1662
BglI	GCCNNNNNGGC	2 cut(s)	231, 632
Bme1390I	CCNGG	7 cut(s)	182, 290, 378, 384, 717, 769, 1628
Bme18I	GGWCC	8 cut(s)	27, 140, 242, 286, 710, 1016, 1473, 2373
BmeRI	GACNNNNNGTC	1 cut(s)	2236
BmgBI	CACGTC	3 cut(s)	1701, 2370, 2389
BmiI	GGNNCC	4 cut(s)	29, 243, 301, 1474
BmrFI	CCNGG	7 cut(s)	182, 290, 378, 384, 717, 769, 1628
BmsI	GCATC	7 cut(s)	645, 1140, 1312, 1704, 2110, 2199, 2290
BpiI	GAAGAC	1 cut(s)	92
BpmI	CTGGAG	1 cut(s)	405
Bpu10I	CCTNAGC	2 cut(s)	6, 252
Bpu14I	TTCGAA	1 cut(s)	1786
BpuEI	CTTGAG	1 cut(s)	2255
BpuMI	CCSGG	1 cut(s)	378
Bsa29I	ATCGAT	1 cut(s)	2207
BsaAI	YACGTR	1 cut(s)	2309
BsaBI	GATNNNNATC	2 cut(s)	807, 1987
BsaJI	CCNNGG	8 cut(s)	201, 382, 754, 931, 944, 1101, 1748, 2256
BsaWI	WCCGGW	2 cut(s)	142, 244
BsaXI	ACNNNNNCTCC	4 cut(s)	862, 892, 2110, 2140
Bsc4I	CCNNNNNNNGG	7 cut(s)	81, 187, 383, 771, 950, 1578, 1661
Bse118I	RCCGGY	3 cut(s)	363, 516, 1153
Bse1I	ACTGG	8 cut(s)	793, 880, 958, 1336, 1843, 1859, 1899, 2062
Bse21I	CCTNAGG	1 cut(s)	726
Bse8I	GATNNNNATC	2 cut(s)	807, 1987
BseBI	CCWGG	6 cut(s)	182, 290, 384, 717, 769, 1628
BseCI	ATCGAT	1 cut(s)	2207
BseDI	CCNNGG	8 cut(s)	201, 382, 754, 931, 944, 1101, 1748, 2256
BseGI	GGATG	5 cut(s)	211, 437, 577, 1155, 1327
BseJI	GATNNNNATC	2 cut(s)	807, 1987
BseLI	CCNNNNNNNGG	7 cut(s)	81, 187, 383, 771, 950, 1578, 1661
BseMII	CTCAG	7 cut(s)	71, 243, 279, 684, 717, 1070, 1884
BseNI	ACTGG	8 cut(s)	793, 880, 958, 1336, 1843, 1859, 1899, 2062
BseRI	GAGGAG	1 cut(s)	743
BseXI	GCAGC	6 cut(s)	240, 1135, 1721, 1739, 2039, 2108
BsgI	GTGCAG	3 cut(s)	357, 1632, 2038
Bsh1236I	CGCG	2 cut(s)	1606, 2215
BshVI	ATCGAT	1 cut(s)	2207
BsiHKAI	GWGCWC	2 cut(s)	12, 1057
BsiSI	CCGG	6 cut(s)	143, 245, 364, 378, 517, 1154
BslFI	GGGAC	4 cut(s)	1415, 1486, 1694, 2224
BslI	CCNNNNNNNGG	7 cut(s)	81, 187, 383, 771, 950, 1578, 1661
BsmAI	GTCTC	2 cut(s)	1772, 2024
BsmFI	GGGAC	4 cut(s)	1415, 1486, 1694, 2224
BsmI	GAATGC	1 cut(s)	2143
Bsp119I	TTCGAA	1 cut(s)	1786
Bsp1286I	GDGCHC	3 cut(s)	12, 1057, 1312
Bsp1407I	TGTACA	1 cut(s)	309
Bsp143I	GATC	4 cut(s)	808, 1386, 1720, 2167
Bsp19I	CCATGG	2 cut(s)	201, 1101
BspCNI	CTCAG	7 cut(s)	72, 244, 278, 685, 718, 1069, 1883
BspDI	ATCGAT	1 cut(s)	2207
BspFNI	CGCG	2 cut(s)	1606, 2215
BspLI	GGNNCC	4 cut(s)	29, 243, 301, 1474
BspMAI	CTGCAG	2 cut(s)	1579, 1711
BspMI	ACCTGC	1 cut(s)	1768
BspPI	GGATC	3 cut(s)	1394, 1728, 2162
BspQI	GCTCTTC	1 cut(s)	128
BspT104I	TTCGAA	1 cut(s)	1786
BsrBI	CCGCTC	1 cut(s)	138
BsrFI	RCCGGY	3 cut(s)	363, 516, 1153
BsrGI	TGTACA	1 cut(s)	309
BsrI	ACTGG	8 cut(s)	793, 880, 958, 1336, 1843, 1859, 1899, 2062
BssAI	RCCGGY	3 cut(s)	363, 516, 1153
BssECI	CCNNGG	8 cut(s)	201, 382, 754, 931, 944, 1101, 1748, 2256
BssMI	GATC	4 cut(s)	808, 1386, 1720, 2167
BssSI	CACGAG	1 cut(s)	2027
BssT1I	CCWWGG	6 cut(s)	201, 754, 944, 1101, 1748, 2256
Bst2BI	CACGAG	1 cut(s)	2027
Bst2UI	CCWGG	6 cut(s)	182, 290, 384, 717, 769, 1628
Bst4CI	ACNGT	4 cut(s)	838, 1685, 1952, 2410
Bst6I	CTCTTC	3 cut(s)	128, 1104, 1788
BstAPI	GCANNNNNTGC	1 cut(s)	623
BstAUI	TGTACA	1 cut(s)	309
BstBAI	YACGTR	1 cut(s)	2309
BstBI	TTCGAA	1 cut(s)	1786
BstC8I	GCNNGC	8 cut(s)	365, 518, 522, 590, 794, 858, 1155, 2158
BstDSI	CCRYGG	3 cut(s)	201, 931, 1101
BstEII	GGTNACC	2 cut(s)	939, 1688
BstENI	CCTNNNNNAGG	2 cut(s)	948, 1659
BstF5I	GGATG	5 cut(s)	211, 437, 577, 1155, 1327
BstFNI	CGCG	2 cut(s)	1606, 2215
BstH2I	RGCGCY	1 cut(s)	2157
BstHHI	GCGC	3 cut(s)	369, 1424, 2156
BstKTI	GATC	4 cut(s)	811, 1389, 1723, 2170
BstMAI	GTCTC	2 cut(s)	1772, 2024
BstMBI	GATC	4 cut(s)	808, 1386, 1720, 2167
BstMWI	GCNNNNNNNGC	6 cut(s)	225, 231, 623, 632, 1198, 2198
BstNI	CCWGG	6 cut(s)	182, 290, 384, 717, 769, 1628
BstNSI	RCATGY	5 cut(s)	621, 800, 860, 1814, 2239
BstPI	GGTNACC	2 cut(s)	939, 1688
BstSCI	CCNGG	7 cut(s)	180, 288, 376, 382, 715, 767, 1626
BstSFI	CTRYAG	3 cut(s)	1575, 1707, 2187
BstUI	CGCG	2 cut(s)	1606, 2215
BstV1I	GCAGC	6 cut(s)	240, 1135, 1721, 1739, 2039, 2108
BstV2I	GAAGAC	1 cut(s)	92
BstX2I	RGATCY	1 cut(s)	2167
BstXI	CCANNNNNNTGG	2 cut(s)	296, 456
BstYI	RGATCY	1 cut(s)	2167
Bsu15I	ATCGAT	1 cut(s)	2207
Bsu36I	CCTNAGG	1 cut(s)	726
BsuI	GTATCC	2 cut(s)	947, 1662
BsuTUI	ATCGAT	1 cut(s)	2207
BtgI	CCRYGG	3 cut(s)	201, 931, 1101
BtgZI	GCGATG	1 cut(s)	1580
BtrI	CACGTC	3 cut(s)	1701, 2370, 2389
BtsCI	GGATG	5 cut(s)	211, 437, 577, 1155, 1327
BtsI	GCAGTG	3 cut(s)	369, 1288, 1572
BtsIMutI	CAGTG	8 cut(s)	77, 369, 1044, 1288, 1572, 1690, 1957, 2055
BveI	ACCTGC	1 cut(s)	1768
Cac8I	GCNNGC	8 cut(s)	365, 518, 522, 590, 794, 858, 1155, 2158
CfoI	GCGC	3 cut(s)	369, 1424, 2156
Cfr10I	RCCGGY	3 cut(s)	363, 516, 1153
ClaI	ATCGAT	1 cut(s)	2207
CpoI	CGGWCCG	1 cut(s)	140
CseI	GACGC	1 cut(s)	2204
CsiI	ACCWGGT	3 cut(s)	180, 767, 1626
Csp6I	GTAC	5 cut(s)	146, 211, 310, 1806, 2310
CspI	CGGWCCG	1 cut(s)	140
CviQI	GTAC	5 cut(s)	146, 211, 310, 1806, 2310
DpnI	GATC	4 cut(s)	810, 1388, 1722, 2169
DpnII	GATC	4 cut(s)	808, 1386, 1720, 2167
DraI	TTTAAA	1 cut(s)	2071
DraIII	CACNNNGTG	2 cut(s)	479, 771
DrdI	GACNNNNNNGTC	1 cut(s)	2387
DriI	GACNNNNNGTC	1 cut(s)	2236
DseDI	GACNNNNNNGTC	1 cut(s)	2387
EaeI	YGGCCR	3 cut(s)	223, 361, 1569
Eam1104I	CTCTTC	3 cut(s)	128, 1104, 1788
Eam1105I	GACNNNNNGTC	1 cut(s)	2236
EarI	CTCTTC	3 cut(s)	128, 1104, 1788
Ecl136II	GAGCTC	1 cut(s)	10
Eco130I	CCWWGG	6 cut(s)	201, 754, 944, 1101, 1748, 2256
Eco147I	AGGCCT	1 cut(s)	1192
Eco24I	GRGCYC	2 cut(s)	12, 1312
Eco32I	GATATC	2 cut(s)	1208, 1985
Eco47I	GGWCC	8 cut(s)	27, 140, 242, 286, 710, 1016, 1473, 2373
Eco53kI	GAGCTC	1 cut(s)	10
Eco57I	CTGAAG	1 cut(s)	2055
Eco81I	CCTNAGG	1 cut(s)	726
Eco91I	GGTNACC	2 cut(s)	939, 1688
EcoICRI	GAGCTC	1 cut(s)	10
EcoNI	CCTNNNNNAGG	2 cut(s)	948, 1659
EcoO109I	RGGNCCY	1 cut(s)	1473
EcoO65I	GGTNACC	2 cut(s)	939, 1688
EcoRII	CCWGG	6 cut(s)	180, 288, 382, 715, 767, 1626
EcoRV	GATATC	2 cut(s)	1208, 1985
EcoT14I	CCWWGG	6 cut(s)	201, 754, 944, 1101, 1748, 2256
EcoT38I	GRGCYC	2 cut(s)	12, 1312
ErhI	CCWWGG	6 cut(s)	201, 754, 944, 1101, 1748, 2256
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FaqI	GGGAC	4 cut(s)	1415, 1486, 1694, 2224
FauI	CCCGC	2 cut(s)	312, 1599
FauNDI	CATATG	1 cut(s)	451
FbaI	TGATCA	1 cut(s)	808
FokI	GGATG	5 cut(s)	218, 444, 584, 1162, 1334
FriOI	GRGCYC	2 cut(s)	12, 1312
FspBI	CTAG	6 cut(s)	561, 663, 1640, 1656, 1889, 1992
GlaI	GCGC	3 cut(s)	368, 1423, 2155
GsuI	CTGGAG	1 cut(s)	405
HaeII	RGCGCY	1 cut(s)	2157
HapII	CCGG	6 cut(s)	143, 245, 364, 378, 517, 1154
HgaI	GACGC	1 cut(s)	2204
HhaI	GCGC	3 cut(s)	369, 1424, 2156
Hin6I	GCGC	3 cut(s)	367, 1422, 2154
HinP1I	GCGC	3 cut(s)	367, 1422, 2154
HincII	GTYRAC	4 cut(s)	751, 1704, 2219, 2367
HindII	GTYRAC	4 cut(s)	751, 1704, 2219, 2367
HindIII	AAGCTT	1 cut(s)	1061
HinfI	GANTC	6 cut(s)	899, 1335, 1508, 1780, 1975, 2041
HpaII	CCGG	6 cut(s)	143, 245, 364, 378, 517, 1154
Hpy188I	TCNGA	8 cut(s)	27, 126, 197, 1059, 1624, 1974, 2360, 2420
Hpy188III	TCNNGA	7 cut(s)	278, 577, 663, 725, 818, 1025, 2285
Hpy99I	CGWCG	3 cut(s)	1121, 2197, 2393
HpyAV	CCTTC	6 cut(s)	63, 166, 1541, 1655, 1668, 2262
HpyCH4III	ACNGT	4 cut(s)	838, 1685, 1952, 2410
HpyCH4IV	ACGT	6 cut(s)	814, 1700, 2020, 2308, 2369, 2388
HpyF10VI	GCNNNNNNNGC	6 cut(s)	225, 231, 623, 632, 1198, 2198
HpySE526I	ACGT	6 cut(s)	814, 1700, 2020, 2308, 2369, 2388
HspAI	GCGC	3 cut(s)	367, 1422, 2154
KroI	GCCGGC	3 cut(s)	363, 516, 1153
KroNI	GCCGGC	3 cut(s)	365, 518, 1155
Ksp22I	TGATCA	1 cut(s)	808
Kzo9I	GATC	4 cut(s)	808, 1386, 1720, 2167
LguI	GCTCTTC	1 cut(s)	128
LmnI	GCTCC	6 cut(s)	15, 274, 386, 1433, 2118, 2298
Lsp1109I	GCAGC	6 cut(s)	240, 1135, 1721, 1739, 2039, 2108
LweI	GCATC	7 cut(s)	645, 1140, 1312, 1704, 2110, 2199, 2290
MabI	ACCWGGT	3 cut(s)	180, 767, 1626
MaeI	CTAG	6 cut(s)	561, 663, 1640, 1656, 1889, 1992
MaeII	ACGT	6 cut(s)	814, 1700, 2020, 2308, 2369, 2388
MaeIII	GTNAC	4 cut(s)	939, 1558, 1688, 2326
MalI	GATC	4 cut(s)	810, 1388, 1722, 2169
MbiI	CCGCTC	1 cut(s)	138
MboI	GATC	4 cut(s)	808, 1386, 1720, 2167
MfeI	CAATTG	2 cut(s)	603, 2111
MflI	RGATCY	1 cut(s)	2167
MhlI	GDGCHC	3 cut(s)	12, 1057, 1312
MlsI	TGGCCA	1 cut(s)	1571
MluNI	TGGCCA	1 cut(s)	1571
MlyI	GAGTC	3 cut(s)	1517, 1774, 1969
MmeI	TCCRAC	2 cut(s)	1057, 2208
Mox20I	TGGCCA	1 cut(s)	1571
MroNI	GCCGGC	3 cut(s)	363, 516, 1153
MroXI	GAANNNNTTC	3 cut(s)	740, 1665, 2040
MscI	TGGCCA	1 cut(s)	1571
MseI	TTAA	7 cut(s)	105, 1097, 1530, 1851, 1901, 2015, 2070
MslI	CAYNNNNRTG	6 cut(s)	454, 542, 681, 1148, 1215, 2176
Msp20I	TGGCCA	1 cut(s)	1571
MspA1I	CMGCKG	2 cut(s)	231, 307
MspI	CCGG	6 cut(s)	143, 245, 364, 378, 517, 1154
MspR9I	CCNGG	7 cut(s)	182, 290, 378, 384, 717, 769, 1628
MunI	CAATTG	2 cut(s)	603, 2111
Mva1269I	GAATGC	1 cut(s)	2143
MvaI	CCWGG	6 cut(s)	182, 290, 384, 717, 769, 1628
MvnI	CGCG	2 cut(s)	1606, 2215
MwoI	GCNNNNNNNGC	6 cut(s)	225, 231, 623, 632, 1198, 2198
NaeI	GCCGGC	3 cut(s)	365, 518, 1155
NciI	CCSGG	1 cut(s)	378
NcoI	CCATGG	2 cut(s)	201, 1101
NdeI	CATATG	1 cut(s)	451
NdeII	GATC	4 cut(s)	808, 1386, 1720, 2167
NgoMIV	GCCGGC	3 cut(s)	363, 516, 1153
NlaIV	GGNNCC	4 cut(s)	29, 243, 301, 1474
NspI	RCATGY	5 cut(s)	621, 800, 860, 1814, 2239
NspV	TTCGAA	1 cut(s)	1786
PaeI	GCATGC	1 cut(s)	860
PceI	AGGCCT	1 cut(s)	1192
PciI	ACATGT	2 cut(s)	1810, 2235
PciSI	GCTCTTC	1 cut(s)	128
PcsI	WCGNNNNNNNCGW	1 cut(s)	2343
PctI	GAATGC	1 cut(s)	2143
PdiI	GCCGGC	3 cut(s)	365, 518, 1155
PdmI	GAANNNNTTC	3 cut(s)	740, 1665, 2040
PfeI	GAWTC	3 cut(s)	899, 1335, 2041
PflFI	GACNNNGTC	2 cut(s)	284, 2320
PflMI	CCANNNNNTGG	1 cut(s)	771
PleI	GAGTC	3 cut(s)	1516, 1774, 1969
PpsI	GAGTC	3 cut(s)	1516, 1774, 1969
Ppu21I	YACGTR	1 cut(s)	2309
PpuMI	RGGWCCY	1 cut(s)	1473
PscI	ACATGT	2 cut(s)	1810, 2235
PshBI	ATTAAT	1 cut(s)	1530
PsiI	TTATAA	1 cut(s)	510
Psp124BI	GAGCTC	1 cut(s)	12
Psp5II	RGGWCCY	1 cut(s)	1473
Psp6I	CCWGG	6 cut(s)	180, 288, 382, 715, 767, 1626
PspEI	GGTNACC	2 cut(s)	939, 1688
PspGI	CCWGG	6 cut(s)	180, 288, 382, 715, 767, 1626
PspN4I	GGNNCC	4 cut(s)	29, 243, 301, 1474
PspPPI	RGGWCCY	1 cut(s)	1473
PstI	CTGCAG	2 cut(s)	1579, 1711
PsuI	RGATCY	1 cut(s)	2167
PsyI	GACNNNGTC	2 cut(s)	284, 2320
RsaI	GTAC	5 cut(s)	147, 212, 311, 1807, 2311
RsaNI	GTAC	5 cut(s)	146, 211, 310, 1806, 2310
RseI	CAYNNNNRTG	6 cut(s)	454, 542, 681, 1148, 1215, 2176
Rsr2I	CGGWCCG	1 cut(s)	140
RsrII	CGGWCCG	1 cut(s)	140
SacI	GAGCTC	1 cut(s)	12
SapI	GCTCTTC	1 cut(s)	128
SaqAI	TTAA	7 cut(s)	105, 1097, 1530, 1851, 1901, 2015, 2070
Sau3AI	GATC	4 cut(s)	808, 1386, 1720, 2167
SchI	GAGTC	3 cut(s)	1517, 1774, 1969
ScrFI	CCNGG	7 cut(s)	182, 290, 378, 384, 717, 769, 1628
SduI	GDGCHC	3 cut(s)	12, 1057, 1312
SexAI	ACCWGGT	3 cut(s)	180, 767, 1626
SfaNI	GCATC	7 cut(s)	645, 1140, 1312, 1704, 2110, 2199, 2290
SfcI	CTRYAG	3 cut(s)	1575, 1707, 2187
SfuI	TTCGAA	1 cut(s)	1786
SinI	GGWCC	8 cut(s)	27, 140, 242, 286, 710, 1016, 1473, 2373
SmiMI	CAYNNNNRTG	6 cut(s)	454, 542, 681, 1148, 1215, 2176
SmlI	CTYRAG	1 cut(s)	2270
SmoI	CTYRAG	1 cut(s)	2270
SphI	GCATGC	1 cut(s)	860
SseBI	AGGCCT	1 cut(s)	1192
SspI	AATATT	1 cut(s)	2133
SspMI	CTAG	6 cut(s)	561, 663, 1640, 1656, 1889, 1992
SstI	GAGCTC	1 cut(s)	12
StuI	AGGCCT	1 cut(s)	1192
StyD4I	CCNGG	7 cut(s)	180, 288, 376, 382, 715, 767, 1626
StyI	CCWWGG	6 cut(s)	201, 754, 944, 1101, 1748, 2256
TaaI	ACNGT	4 cut(s)	838, 1685, 1952, 2410
TaiI	ACGT	6 cut(s)	817, 1703, 2023, 2311, 2372, 2391
TaqI	TCGA	5 cut(s)	150, 1672, 1786, 2147, 2207
TaqII	GACCGA	1 cut(s)	2390
TatI	WGTACW	2 cut(s)	309, 1805
TauI	GCSGC	5 cut(s)	18, 77, 228, 234, 2215
TfiI	GAWTC	3 cut(s)	899, 1335, 2041
Tru1I	TTAA	7 cut(s)	105, 1097, 1530, 1851, 1901, 2015, 2070
Tru9I	TTAA	7 cut(s)	105, 1097, 1530, 1851, 1901, 2015, 2070
TscAI	CASTG	8 cut(s)	84, 376, 1051, 1288, 1579, 1690, 1957, 2062
TseI	GCWGC	6 cut(s)	228, 1123, 1709, 1727, 2052, 2121
TspDTI	ATGAA	9 cut(s)	494, 981, 1211, 1275, 1368, 1658, 1782, 1818, 2126
TspGWI	ACGGA	1 cut(s)	920
TspRI	CASTG	8 cut(s)	84, 376, 1051, 1288, 1579, 1690, 1957, 2062
Tth111I	GACNNNGTC	2 cut(s)	284, 2320
Van91I	CCANNNNNTGG	1 cut(s)	771
VpaK11BI	GGWCC	8 cut(s)	27, 140, 242, 286, 710, 1016, 1473, 2373
VspI	ATTAAT	1 cut(s)	1530
XagI	CCTNNNNNAGG	2 cut(s)	948, 1659
XapI	RAATTY	3 cut(s)	407, 462, 1137
XbaI	TCTAGA	1 cut(s)	662
XceI	RCATGY	5 cut(s)	621, 800, 860, 1814, 2239
XcmI	CCANNNNNNNNNTGG	1 cut(s)	453
XmnI	GAANNNNTTC	3 cut(s)	740, 1665, 2040
XspI	CTAG	6 cut(s)	561, 663, 1640, 1656, 1889, 1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.