No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0330901 RchiOBHm_Chr2g0171521 |
| rosa_multiflora | Rmu_sc0000133.1_g000010 Rmu_sc0001356.1_g000013 Rmu_sc0004924.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00310330 Rroxscaffold_5G00342300 |
| rosa_rugosa | Rorug03G0343800 |
| rosa_samantha | Rh1BG054600 Rh1CG048000 Rh1CG199700 Rh2CG281400 Rh6BG289700 Rh6DG077300 Rh6DG266000 Rh7AG375700 Rh7AG405000 |
| rosa_wichuraiana | Rw7G009430 Rw7G021360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 63 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 29 |
| AgsI | TTSAA | 2 cut(s) | 16, 37 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 1 cut(s) | 57 |
| AsuII | TTCGAA | 1 cut(s) | 50 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| BanII | GRGCYC | 1 cut(s) | 259 |
| BbsI | GAAGAC | 1 cut(s) | 257 |
| BfmI | CTRYAG | 1 cut(s) | 197 |
| BglII | AGATCT | 2 cut(s) | 193, 201 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 63 |
| BmgT120I | GGNCC | 1 cut(s) | 57 |
| BmrI | ACTGGG | 1 cut(s) | 281 |
| BmsI | GCATC | 1 cut(s) | 132 |
| BmuI | ACTGGG | 1 cut(s) | 281 |
| BpiI | GAAGAC | 1 cut(s) | 257 |
| Bpu14I | TTCGAA | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 29 |
| Bse118I | RCCGGY | 1 cut(s) | 59 |
| Bse1I | ACTGG | 1 cut(s) | 276 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 29 |
| BseNI | ACTGG | 1 cut(s) | 276 |
| BsgI | GTGCAG | 1 cut(s) | 234 |
| BsiSI | CCGG | 1 cut(s) | 60 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 29 |
| Bsp119I | TTCGAA | 1 cut(s) | 50 |
| Bsp1286I | GDGCHC | 1 cut(s) | 259 |
| Bsp143I | GATC | 3 cut(s) | 74, 193, 201 |
| BspACI | CCGC | 1 cut(s) | 63 |
| BspMAI | CTGCAG | 1 cut(s) | 201 |
| BspQI | GCTCTTC | 2 cut(s) | 11, 264 |
| BspT104I | TTCGAA | 1 cut(s) | 50 |
| BsrFI | RCCGGY | 1 cut(s) | 59 |
| BsrI | ACTGG | 1 cut(s) | 276 |
| BssAI | RCCGGY | 1 cut(s) | 59 |
| BssMI | GATC | 3 cut(s) | 74, 193, 201 |
| Bst4CI | ACNGT | 1 cut(s) | 151 |
| Bst6I | CTCTTC | 3 cut(s) | 11, 32, 264 |
| BstBI | TTCGAA | 1 cut(s) | 50 |
| BstC8I | GCNNGC | 1 cut(s) | 177 |
| BstKTI | GATC | 3 cut(s) | 77, 196, 204 |
| BstMBI | GATC | 3 cut(s) | 74, 193, 201 |
| BstNSI | RCATGY | 1 cut(s) | 179 |
| BstSFI | CTRYAG | 1 cut(s) | 197 |
| BstV2I | GAAGAC | 1 cut(s) | 257 |
| BstX2I | RGATCY | 2 cut(s) | 193, 201 |
| BstYI | RGATCY | 2 cut(s) | 193, 201 |
| BtsIMutI | CAGTG | 1 cut(s) | 269 |
| Cac8I | GCNNGC | 1 cut(s) | 177 |
| Cfr10I | RCCGGY | 1 cut(s) | 59 |
| Cfr13I | GGNCC | 1 cut(s) | 57 |
| CpoI | CGGWCCG | 1 cut(s) | 57 |
| CspI | CGGWCCG | 1 cut(s) | 57 |
| CviAII | CATG | 1 cut(s) | 176 |
| CviJI | RGCY | 3 cut(s) | 85, 257, 276 |
| CviKI_1 | RGCY | 3 cut(s) | 85, 257, 276 |
| DpnI | GATC | 3 cut(s) | 76, 195, 203 |
| DpnII | GATC | 3 cut(s) | 74, 193, 201 |
| DriI | GACNNNNNGTC | 1 cut(s) | 63 |
| Eam1104I | CTCTTC | 3 cut(s) | 11, 32, 264 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 3 cut(s) | 11, 32, 264 |
| Eco24I | GRGCYC | 1 cut(s) | 259 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| EcoT38I | GRGCYC | 1 cut(s) | 259 |
| FaeI | CATG | 1 cut(s) | 179 |
| FaiI | YATR | 2 cut(s) | 163, 177 |
| FatI | CATG | 1 cut(s) | 175 |
| FriOI | GRGCYC | 1 cut(s) | 259 |
| HapII | CCGG | 1 cut(s) | 60 |
| Hin1II | CATG | 1 cut(s) | 179 |
| HinfI | GANTC | 1 cut(s) | 52 |
| HpaII | CCGG | 1 cut(s) | 60 |
| Hpy188I | TCNGA | 2 cut(s) | 57, 141 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| Hpy99I | CGWCG | 1 cut(s) | 151 |
| HpyAV | CCTTC | 1 cut(s) | 22 |
| HpyCH4III | ACNGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 4 cut(s) | 175, 179, 199, 251 |
| Hsp92II | CATG | 1 cut(s) | 179 |
| Kzo9I | GATC | 3 cut(s) | 74, 193, 201 |
| LguI | GCTCTTC | 2 cut(s) | 11, 264 |
| LpnPI | CCDG | 5 cut(s) | 36, 73, 104, 257, 261 |
| LweI | GCATC | 1 cut(s) | 132 |
| MalI | GATC | 3 cut(s) | 76, 195, 203 |
| MboI | GATC | 3 cut(s) | 74, 193, 201 |
| MboII | GAAGA | 3 cut(s) | 49, 251, 257 |
| MflI | RGATCY | 2 cut(s) | 193, 201 |
| MhlI | GDGCHC | 1 cut(s) | 259 |
| MluCI | AATT | 1 cut(s) | 16 |
| MnlI | CCTC | 1 cut(s) | 75 |
| MslI | CAYNNNNRTG | 1 cut(s) | 180 |
| MspI | CCGG | 1 cut(s) | 60 |
| NdeII | GATC | 3 cut(s) | 74, 193, 201 |
| NlaIII | CATG | 1 cut(s) | 179 |
| NspI | RCATGY | 1 cut(s) | 179 |
| NspV | TTCGAA | 1 cut(s) | 50 |
| PaeI | GCATGC | 1 cut(s) | 179 |
| PciSI | GCTCTTC | 2 cut(s) | 11, 264 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 259 |
| PfeI | GAWTC | 1 cut(s) | 52 |
| PspPI | GGNCC | 1 cut(s) | 57 |
| PstI | CTGCAG | 1 cut(s) | 201 |
| PsuI | RGATCY | 2 cut(s) | 193, 201 |
| RseI | CAYNNNNRTG | 1 cut(s) | 180 |
| Rsr2I | CGGWCCG | 1 cut(s) | 57 |
| RsrII | CGGWCCG | 1 cut(s) | 57 |
| SapI | GCTCTTC | 2 cut(s) | 11, 264 |
| Sau3AI | GATC | 3 cut(s) | 74, 193, 201 |
| Sau96I | GGNCC | 1 cut(s) | 57 |
| SduI | GDGCHC | 1 cut(s) | 259 |
| SetI | ASST | 1 cut(s) | 215 |
| SfaNI | GCATC | 1 cut(s) | 132 |
| SfcI | CTRYAG | 1 cut(s) | 197 |
| SfuI | TTCGAA | 1 cut(s) | 50 |
| SinI | GGWCC | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 180 |
| SphI | GCATGC | 1 cut(s) | 179 |
| Sse9I | AATT | 1 cut(s) | 16 |
| SsiI | CCGC | 1 cut(s) | 63 |
| TaaI | ACNGT | 1 cut(s) | 151 |
| TaqI | TCGA | 2 cut(s) | 50, 226 |
| TasI | AATT | 1 cut(s) | 16 |
| TfiI | GAWTC | 1 cut(s) | 52 |
| TscAI | CASTG | 1 cut(s) | 276 |
| TspRI | CASTG | 1 cut(s) | 276 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| XceI | RCATGY | 1 cut(s) | 179 |