Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0330901 RchiOBHm_Chr2g0171521 |
| rosa_multiflora | Rmu_sc0000133.1_g000010 Rmu_sc0001356.1_g000013 Rmu_sc0004924.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00310330 Rroxscaffold_5G00342300 |
| rosa_rugosa | Rorug03G0343800 |
| rosa_samantha | Rh1BG054600 Rh1CG048000 Rh1CG199700 Rh2CG281400 Rh6BG289700 Rh6DG077300 Rh6DG266000 Rh7AG375700 Rh7AG405000 |
| rosa_wichuraiana | Rw7G009430 Rw7G021360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 137 |
| AcsI | RAATTY | 2 cut(s) | 108, 163 |
| AfaI | GTAC | 1 cut(s) | 101 |
| AgeI | ACCGGT | 1 cut(s) | 28 |
| AgsI | TTSAA | 2 cut(s) | 47, 169 |
| AluBI | AGCT | 2 cut(s) | 36, 65 |
| AluI | AGCT | 2 cut(s) | 36, 65 |
| Alw21I | GWGCWC | 1 cut(s) | 38 |
| AlwI | GGATC | 1 cut(s) | 137 |
| ApoI | RAATTY | 2 cut(s) | 108, 163 |
| AsiGI | ACCGGT | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 1 cut(s) | 43 |
| AsuII | TTCGAA | 1 cut(s) | 161 |
| BanII | GRGCYC | 1 cut(s) | 38 |
| Bbv12I | GWGCWC | 1 cut(s) | 38 |
| Bpu14I | TTCGAA | 1 cut(s) | 161 |
| BsaWI | WCCGGW | 1 cut(s) | 28 |
| Bse118I | RCCGGY | 1 cut(s) | 28 |
| BseMII | CTCAG | 1 cut(s) | 127 |
| BshTI | ACCGGT | 1 cut(s) | 28 |
| BsiHKAI | GWGCWC | 1 cut(s) | 38 |
| BsiSI | CCGG | 1 cut(s) | 29 |
| Bsp119I | TTCGAA | 1 cut(s) | 161 |
| Bsp1286I | GDGCHC | 1 cut(s) | 38 |
| Bsp143I | GATC | 1 cut(s) | 142 |
| BspCNI | CTCAG | 1 cut(s) | 126 |
| BspPI | GGATC | 1 cut(s) | 137 |
| BspT104I | TTCGAA | 1 cut(s) | 161 |
| BsrFI | RCCGGY | 1 cut(s) | 28 |
| BssAI | RCCGGY | 1 cut(s) | 28 |
| BssMI | GATC | 1 cut(s) | 142 |
| BstBI | TTCGAA | 1 cut(s) | 161 |
| BstDEI | CTNAG | 1 cut(s) | 113 |
| BstKTI | GATC | 1 cut(s) | 145 |
| BstMBI | GATC | 1 cut(s) | 142 |
| Cfr10I | RCCGGY | 1 cut(s) | 28 |
| Csp6I | GTAC | 1 cut(s) | 100 |
| CspAI | ACCGGT | 1 cut(s) | 28 |
| CviAII | CATG | 3 cut(s) | 39, 77, 91 |
| CviJI | RGCY | 3 cut(s) | 36, 65, 128 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 65, 128 |
| CviQI | GTAC | 1 cut(s) | 100 |
| DdeI | CTNAG | 1 cut(s) | 113 |
| DpnI | GATC | 1 cut(s) | 144 |
| DpnII | GATC | 1 cut(s) | 142 |
| Ecl136II | GAGCTC | 1 cut(s) | 36 |
| Eco24I | GRGCYC | 1 cut(s) | 38 |
| Eco53kI | GAGCTC | 1 cut(s) | 36 |
| EcoICRI | GAGCTC | 1 cut(s) | 36 |
| EcoRI | GAATTC | 1 cut(s) | 108 |
| EcoT38I | GRGCYC | 1 cut(s) | 38 |
| FaeI | CATG | 3 cut(s) | 42, 80, 94 |
| FaiI | YATR | 4 cut(s) | 21, 40, 78, 92 |
| FatI | CATG | 3 cut(s) | 38, 76, 90 |
| FriOI | GRGCYC | 1 cut(s) | 38 |
| HapII | CCGG | 1 cut(s) | 29 |
| Hin1II | CATG | 3 cut(s) | 42, 80, 94 |
| HpaII | CCGG | 1 cut(s) | 29 |
| HphI | GGTGA | 1 cut(s) | 43 |
| Hpy188I | TCNGA | 1 cut(s) | 125 |
| HpyAV | CCTTC | 1 cut(s) | 168 |
| HpyCH4V | TGCA | 1 cut(s) | 55 |
| HpyF3I | CTNAG | 1 cut(s) | 113 |
| Hsp92II | CATG | 3 cut(s) | 42, 80, 94 |
| Kzo9I | GATC | 1 cut(s) | 142 |
| LpnPI | CCDG | 2 cut(s) | 42, 82 |
| MalI | GATC | 1 cut(s) | 144 |
| MboI | GATC | 1 cut(s) | 142 |
| MhlI | GDGCHC | 1 cut(s) | 38 |
| MluCI | AATT | 4 cut(s) | 108, 130, 163, 169 |
| MnlI | CCTC | 2 cut(s) | 52, 129 |
| MseI | TTAA | 1 cut(s) | 172 |
| MspI | CCGG | 1 cut(s) | 29 |
| NdeII | GATC | 1 cut(s) | 142 |
| NlaIII | CATG | 3 cut(s) | 42, 80, 94 |
| NspV | TTCGAA | 1 cut(s) | 161 |
| PinAI | ACCGGT | 1 cut(s) | 28 |
| Psp124BI | GAGCTC | 1 cut(s) | 38 |
| RsaI | GTAC | 1 cut(s) | 101 |
| RsaNI | GTAC | 1 cut(s) | 100 |
| SacI | GAGCTC | 1 cut(s) | 38 |
| SaqAI | TTAA | 1 cut(s) | 172 |
| Sau3AI | GATC | 1 cut(s) | 142 |
| SduI | GDGCHC | 1 cut(s) | 38 |
| SetI | ASST | 5 cut(s) | 38, 63, 67, 101, 153 |
| SfuI | TTCGAA | 1 cut(s) | 161 |
| SgeI | CNNG | 9 cut(s) | 41, 51, 68, 83, 89, 103, 109, 137, 152 |
| SgrAI | CRCCGGYG | 1 cut(s) | 28 |
| Sse9I | AATT | 4 cut(s) | 108, 130, 163, 169 |
| SstI | GAGCTC | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 161 |
| TasI | AATT | 4 cut(s) | 108, 130, 163, 169 |
| Tru1I | TTAA | 1 cut(s) | 172 |
| Tru9I | TTAA | 1 cut(s) | 172 |
| XapI | RAATTY | 2 cut(s) | 108, 163 |