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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0363721 RchiOBHm_Chr2g0173981 RchiOBHm_Chr4g0394391 |
| rosa_multiflora | Rmu_sc0001644.1_g000025 Rmu_sc0003301.1_g000014 Rmu_sc0005592.1_g000022 Rmu_sc0009451.1_g000005 Rmu_sc0033532.1_g000001 |
| rosa_roxburghii | Rroxscaffold_160G00433970 Rroxscaffold_1G00043050 Rroxscaffold_4G00311030 Rroxscaffold_5G00368050 Rroxscaffold_6G00395850 Rroxscaffold_6G00404020 Rroxscaffold_7G00182210 |
| rosa_rugosa | Rorug05G0195200 |
| rosa_samantha | Rh4DG298400 |
| rosa_wichuraiana | Rw4G008430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 535 |
| AccII | CGCG | 2 cut(s) | 316, 765 |
| AclWI | GGATC | 3 cut(s) | 102, 115, 222 |
| AcoI | YGGCCR | 1 cut(s) | 624 |
| AcvI | CACGTG | 1 cut(s) | 652 |
| AfaI | GTAC | 1 cut(s) | 592 |
| AfeI | AGCGCT | 1 cut(s) | 390 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 71, 403 |
| AgsI | TTSAA | 2 cut(s) | 469, 903 |
| AjnI | CCWGG | 1 cut(s) | 43 |
| Alw26I | GTCTC | 1 cut(s) | 225 |
| AlwI | GGATC | 3 cut(s) | 102, 115, 222 |
| Ama87I | CYCGRG | 1 cut(s) | 25 |
| Aor51HI | AGCGCT | 1 cut(s) | 390 |
| AoxI | GGCC | 5 cut(s) | 394, 426, 440, 624, 816 |
| ApeKI | GCWGC | 6 cut(s) | 31, 75, 130, 133, 295, 745 |
| AspLEI | GCGC | 3 cut(s) | 316, 391, 601 |
| AspS9I | GGNCC | 4 cut(s) | 41, 421, 426, 440 |
| AsuC2I | CCSGG | 2 cut(s) | 112, 425 |
| AvaI | CYCGRG | 1 cut(s) | 25 |
| AvaII | GGWCC | 2 cut(s) | 41, 421 |
| BamHI | GGATCC | 1 cut(s) | 107 |
| BanII | GRGCYC | 1 cut(s) | 24 |
| BbrPI | CACGTG | 1 cut(s) | 652 |
| BbvI | GCAGC | 6 cut(s) | 43, 87, 142, 145, 282, 732 |
| BccI | CCATC | 4 cut(s) | 109, 341, 347, 610 |
| BceAI | ACGGC | 1 cut(s) | 611 |
| BciT130I | CCWGG | 1 cut(s) | 45 |
| BcnI | CCSGG | 2 cut(s) | 112, 425 |
| BcoDI | GTCTC | 1 cut(s) | 225 |
| BfaI | CTAG | 3 cut(s) | 444, 735, 851 |
| BfmI | CTRYAG | 1 cut(s) | 594 |
| BfoI | RGCGCY | 2 cut(s) | 392, 602 |
| BisI | GCNGC | 9 cut(s) | 32, 76, 131, 134, 171, 296, 338, 632, 746 |
| BlsI | GCNGC | 9 cut(s) | 33, 77, 132, 135, 172, 297, 339, 633, 747 |
| Bme1390I | CCNGG | 3 cut(s) | 45, 112, 425 |
| Bme18I | GGWCC | 2 cut(s) | 41, 421 |
| BmeT110I | CYCGRG | 1 cut(s) | 25 |
| BmgT120I | GGNCC | 4 cut(s) | 41, 421, 426, 440 |
| BmiI | GGNNCC | 1 cut(s) | 109 |
| BmrFI | CCNGG | 3 cut(s) | 45, 112, 425 |
| BmsI | GCATC | 3 cut(s) | 117, 182, 555 |
| BpmI | CTGGAG | 1 cut(s) | 280 |
| BpuEI | CTTGAG | 1 cut(s) | 701 |
| BpuMI | CCSGG | 2 cut(s) | 112, 425 |
| Bsa29I | ATCGAT | 1 cut(s) | 176 |
| BsaAI | YACGTR | 1 cut(s) | 652 |
| BsaBI | GATNNNNATC | 1 cut(s) | 208 |
| BsaJI | CCNNGG | 3 cut(s) | 44, 753, 763 |
| BsaWI | WCCGGW | 1 cut(s) | 153 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 399, 429 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 71, 403 |
| Bse118I | RCCGGY | 1 cut(s) | 818 |
| Bse8I | GATNNNNATC | 1 cut(s) | 208 |
| BseBI | CCWGG | 1 cut(s) | 45 |
| BseCI | ATCGAT | 1 cut(s) | 176 |
| BseDI | CCNNGG | 3 cut(s) | 44, 753, 763 |
| BseGI | GGATG | 3 cut(s) | 120, 378, 796 |
| BseJI | GATNNNNATC | 1 cut(s) | 208 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 71, 403 |
| BseXI | GCAGC | 6 cut(s) | 43, 87, 142, 145, 282, 732 |
| Bsh1236I | CGCG | 2 cut(s) | 316, 765 |
| BshFI | GGCC | 5 cut(s) | 396, 428, 442, 626, 818 |
| BshVI | ATCGAT | 1 cut(s) | 176 |
| BsiHKCI | CYCGRG | 1 cut(s) | 25 |
| BsiSI | CCGG | 4 cut(s) | 111, 154, 424, 819 |
| BslFI | GGGAC | 3 cut(s) | 370, 504, 683 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 71, 403 |
| BsmAI | GTCTC | 1 cut(s) | 225 |
| BsmFI | GGGAC | 3 cut(s) | 370, 504, 683 |
| BsnI | GGCC | 5 cut(s) | 396, 428, 442, 626, 818 |
| BsoBI | CYCGRG | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 1 cut(s) | 24 |
| Bsp143I | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| Bsp19I | CCATGG | 1 cut(s) | 753 |
| BspANI | GGCC | 5 cut(s) | 396, 428, 442, 626, 818 |
| BspDI | ATCGAT | 1 cut(s) | 176 |
| BspFNI | CGCG | 2 cut(s) | 316, 765 |
| BspLI | GGNNCC | 1 cut(s) | 109 |
| BspPI | GGATC | 3 cut(s) | 102, 115, 222 |
| BsrBI | CCGCTC | 1 cut(s) | 535 |
| BsrFI | RCCGGY | 1 cut(s) | 818 |
| BssAI | RCCGGY | 1 cut(s) | 818 |
| BssECI | CCNNGG | 3 cut(s) | 44, 753, 763 |
| BssMI | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| BssT1I | CCWWGG | 1 cut(s) | 753 |
| Bst2UI | CCWGG | 1 cut(s) | 45 |
| Bst4CI | ACNGT | 2 cut(s) | 595, 676 |
| BstBAI | YACGTR | 1 cut(s) | 652 |
| BstC8I | GCNNGC | 2 cut(s) | 272, 763 |
| BstDSI | CCRYGG | 2 cut(s) | 753, 763 |
| BstF5I | GGATG | 3 cut(s) | 120, 378, 796 |
| BstFNI | CGCG | 2 cut(s) | 316, 765 |
| BstH2I | RGCGCY | 2 cut(s) | 392, 602 |
| BstHHI | GCGC | 3 cut(s) | 316, 391, 601 |
| BstKTI | GATC | 6 cut(s) | 85, 95, 110, 180, 212, 217 |
| BstMAI | GTCTC | 1 cut(s) | 225 |
| BstMBI | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 28, 301, 805 |
| BstNI | CCWGG | 1 cut(s) | 45 |
| BstSCI | CCNGG | 3 cut(s) | 43, 110, 423 |
| BstSFI | CTRYAG | 1 cut(s) | 594 |
| BstUI | CGCG | 2 cut(s) | 316, 765 |
| BstV1I | GCAGC | 6 cut(s) | 43, 87, 142, 145, 282, 732 |
| BstX2I | RGATCY | 2 cut(s) | 107, 214 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 576, 609 |
| BstYI | RGATCY | 2 cut(s) | 107, 214 |
| Bsu15I | ATCGAT | 1 cut(s) | 176 |
| BsuRI | GGCC | 5 cut(s) | 396, 428, 442, 626, 818 |
| BsuTUI | ATCGAT | 1 cut(s) | 176 |
| BtgI | CCRYGG | 2 cut(s) | 753, 763 |
| BtgZI | GCGATG | 1 cut(s) | 366 |
| BtsCI | GGATG | 3 cut(s) | 120, 378, 796 |
| BtsI | GCAGTG | 2 cut(s) | 129, 297 |
| BtsIMutI | CAGTG | 2 cut(s) | 129, 297 |
| Cac8I | GCNNGC | 2 cut(s) | 272, 763 |
| CfoI | GCGC | 3 cut(s) | 316, 391, 601 |
| Cfr10I | RCCGGY | 1 cut(s) | 818 |
| Cfr13I | GGNCC | 4 cut(s) | 41, 421, 426, 440 |
| Cfr42I | CCGCGG | 1 cut(s) | 766 |
| ClaI | ATCGAT | 1 cut(s) | 176 |
| CseI | GACGC | 1 cut(s) | 549 |
| Csp6I | GTAC | 1 cut(s) | 591 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 356, 391 |
| CviAII | CATG | 3 cut(s) | 185, 754, 897 |
| CviQI | GTAC | 1 cut(s) | 591 |
| DpnI | GATC | 6 cut(s) | 84, 94, 109, 179, 211, 216 |
| DpnII | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| EaeI | YGGCCR | 1 cut(s) | 624 |
| EciI | GGCGGA | 1 cut(s) | 826 |
| Eco130I | CCWWGG | 1 cut(s) | 753 |
| Eco24I | GRGCYC | 1 cut(s) | 24 |
| Eco47I | GGWCC | 2 cut(s) | 41, 421 |
| Eco47III | AGCGCT | 1 cut(s) | 390 |
| Eco72I | CACGTG | 1 cut(s) | 652 |
| Eco88I | CYCGRG | 1 cut(s) | 25 |
| EcoRII | CCWGG | 1 cut(s) | 43 |
| EcoT14I | CCWWGG | 1 cut(s) | 753 |
| EcoT38I | GRGCYC | 1 cut(s) | 24 |
| ErhI | CCWWGG | 1 cut(s) | 753 |
| FaeI | CATG | 3 cut(s) | 188, 757, 900 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 292, 324 |
| FaqI | GGGAC | 3 cut(s) | 370, 504, 683 |
| FatI | CATG | 3 cut(s) | 184, 753, 896 |
| FauI | CCCGC | 3 cut(s) | 528, 758, 770 |
| FauNDI | CATATG | 1 cut(s) | 886 |
| Fnu4HI | GCNGC | 9 cut(s) | 32, 76, 131, 134, 171, 296, 338, 632, 746 |
| FokI | GGATG | 3 cut(s) | 127, 385, 803 |
| FriOI | GRGCYC | 1 cut(s) | 24 |
| Fsp4HI | GCNGC | 9 cut(s) | 32, 76, 131, 134, 171, 296, 338, 632, 746 |
| FspBI | CTAG | 3 cut(s) | 444, 735, 851 |
| GlaI | GCGC | 3 cut(s) | 315, 390, 600 |
| GluI | GCNGC | 9 cut(s) | 32, 76, 131, 134, 171, 296, 338, 632, 746 |
| GsuI | CTGGAG | 1 cut(s) | 280 |
| HaeII | RGCGCY | 2 cut(s) | 392, 602 |
| HaeIII | GGCC | 5 cut(s) | 396, 428, 442, 626, 818 |
| HapII | CCGG | 4 cut(s) | 111, 154, 424, 819 |
| HgaI | GACGC | 1 cut(s) | 549 |
| HhaI | GCGC | 3 cut(s) | 316, 391, 601 |
| Hin1II | CATG | 3 cut(s) | 188, 757, 900 |
| Hin6I | GCGC | 3 cut(s) | 314, 389, 599 |
| HinP1I | GCGC | 3 cut(s) | 314, 389, 599 |
| HinfI | GANTC | 3 cut(s) | 204, 358, 696 |
| HpaII | CCGG | 4 cut(s) | 111, 154, 424, 819 |
| Hpy188I | TCNGA | 6 cut(s) | 9, 66, 107, 209, 214, 225 |
| Hpy188III | TCNNGA | 2 cut(s) | 90, 259 |
| Hpy99I | CGWCG | 3 cut(s) | 141, 366, 565 |
| HpyAV | CCTTC | 3 cut(s) | 110, 294, 853 |
| HpyCH4III | ACNGT | 2 cut(s) | 595, 676 |
| HpyCH4IV | ACGT | 2 cut(s) | 139, 651 |
| HpyCH4V | TGCA | 1 cut(s) | 130 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 28, 301, 805 |
| HpySE526I | ACGT | 2 cut(s) | 139, 651 |
| Hsp92II | CATG | 3 cut(s) | 188, 757, 900 |
| HspAI | GCGC | 3 cut(s) | 314, 389, 599 |
| KspI | CCGCGG | 1 cut(s) | 766 |
| Kzo9I | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| Lsp1109I | GCAGC | 6 cut(s) | 43, 87, 142, 145, 282, 732 |
| LweI | GCATC | 3 cut(s) | 117, 182, 555 |
| MaeI | CTAG | 3 cut(s) | 444, 735, 851 |
| MaeII | ACGT | 2 cut(s) | 139, 651 |
| MaeIII | GTNAC | 2 cut(s) | 281, 890 |
| MalI | GATC | 6 cut(s) | 84, 94, 109, 179, 211, 216 |
| MbiI | CCGCTC | 1 cut(s) | 535 |
| MboI | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| MboII | GAAGA | 1 cut(s) | 135 |
| MflI | RGATCY | 2 cut(s) | 107, 214 |
| MhlI | GDGCHC | 1 cut(s) | 24 |
| MluCI | AATT | 1 cut(s) | 777 |
| MlyI | GAGTC | 1 cut(s) | 352 |
| MmeI | TCCRAC | 3 cut(s) | 89, 768, 836 |
| MnlI | CCTC | 8 cut(s) | 3, 42, 49, 112, 535, 655, 678, 808 |
| MslI | CAYNNNNRTG | 2 cut(s) | 607, 710 |
| MspA1I | CMGCKG | 2 cut(s) | 34, 765 |
| MspI | CCGG | 4 cut(s) | 111, 154, 424, 819 |
| MspR9I | CCNGG | 3 cut(s) | 45, 112, 425 |
| MvaI | CCWGG | 1 cut(s) | 45 |
| MvnI | CGCG | 2 cut(s) | 316, 765 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 28, 301, 805 |
| NciI | CCSGG | 2 cut(s) | 112, 425 |
| NcoI | CCATGG | 1 cut(s) | 753 |
| NdeI | CATATG | 1 cut(s) | 886 |
| NdeII | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| NlaIII | CATG | 3 cut(s) | 188, 757, 900 |
| NlaIV | GGNNCC | 1 cut(s) | 109 |
| NmuCI | GTSAC | 1 cut(s) | 281 |
| PfeI | GAWTC | 2 cut(s) | 204, 696 |
| PfoI | TCCNGGA | 1 cut(s) | 110 |
| PkrI | GCNGC | 9 cut(s) | 33, 77, 132, 135, 172, 297, 339, 633, 747 |
| PleI | GAGTC | 1 cut(s) | 352 |
| PmaCI | CACGTG | 1 cut(s) | 652 |
| PmlI | CACGTG | 1 cut(s) | 652 |
| PpsI | GAGTC | 1 cut(s) | 352 |
| Ppu21I | YACGTR | 1 cut(s) | 652 |
| Psp6I | CCWGG | 1 cut(s) | 43 |
| PspCI | CACGTG | 1 cut(s) | 652 |
| PspGI | CCWGG | 1 cut(s) | 43 |
| PspN4I | GGNNCC | 1 cut(s) | 109 |
| PspPI | GGNCC | 4 cut(s) | 41, 421, 426, 440 |
| PsuI | RGATCY | 2 cut(s) | 107, 214 |
| RsaI | GTAC | 1 cut(s) | 592 |
| RsaNI | GTAC | 1 cut(s) | 591 |
| RseI | CAYNNNNRTG | 2 cut(s) | 607, 710 |
| SacII | CCGCGG | 1 cut(s) | 766 |
| SatI | GCNGC | 9 cut(s) | 32, 76, 131, 134, 171, 296, 338, 632, 746 |
| Sau3AI | GATC | 6 cut(s) | 82, 92, 107, 177, 209, 214 |
| Sau96I | GGNCC | 4 cut(s) | 41, 421, 426, 440 |
| SchI | GAGTC | 1 cut(s) | 352 |
| ScrFI | CCNGG | 3 cut(s) | 45, 112, 425 |
| SduI | GDGCHC | 1 cut(s) | 24 |
| SetI | ASST | 6 cut(s) | 14, 142, 558, 654, 785, 856 |
| SfaNI | GCATC | 3 cut(s) | 117, 182, 555 |
| SfcI | CTRYAG | 1 cut(s) | 594 |
| Sfr303I | CCGCGG | 1 cut(s) | 766 |
| SgrBI | CCGCGG | 1 cut(s) | 766 |
| SinI | GGWCC | 2 cut(s) | 41, 421 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 607, 710 |
| SmlI | CTYRAG | 1 cut(s) | 680 |
| SmoI | CTYRAG | 1 cut(s) | 680 |
| Sse9I | AATT | 1 cut(s) | 777 |
| SspMI | CTAG | 3 cut(s) | 444, 735, 851 |
| StyD4I | CCNGG | 3 cut(s) | 43, 110, 423 |
| StyI | CCWWGG | 1 cut(s) | 753 |
| TaaI | ACNGT | 2 cut(s) | 595, 676 |
| TaiI | ACGT | 2 cut(s) | 142, 654 |
| TaqI | TCGA | 3 cut(s) | 91, 176, 563 |
| TaqII | GACCGA | 1 cut(s) | 605 |
| TasI | AATT | 1 cut(s) | 777 |
| TatI | WGTACW | 1 cut(s) | 590 |
| TauI | GCSGC | 3 cut(s) | 173, 340, 634 |
| TfiI | GAWTC | 2 cut(s) | 204, 696 |
| TscAI | CASTG | 2 cut(s) | 129, 297 |
| TseFI | GTSAC | 1 cut(s) | 281 |
| TseI | GCWGC | 6 cut(s) | 31, 75, 130, 133, 295, 745 |
| Tsp45I | GTSAC | 1 cut(s) | 281 |
| TspDTI | ATGAA | 1 cut(s) | 688 |
| TspGWI | ACGGA | 1 cut(s) | 385 |
| TspRI | CASTG | 2 cut(s) | 129, 297 |
| VpaK11BI | GGWCC | 2 cut(s) | 41, 421 |
| XspI | CTAG | 3 cut(s) | 444, 735, 851 |