Rmu_sc0005592.1_g000022

Protein of unknown function (DUF1639)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005592.1
Physical Location & Seq
Forward (+)
73750 .. 77935
4186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005592.1_g000022.1.cds

Sequence Viewer

Length: 1572 bp
atggcttcggcgtggcggcttgttgctgagtggcggcgatttggtggcgttggagcttgccggaggtgggtgtggctgcttgcagcgcgtggcttctgtgaggggtggggagaatgggccttggactgggctaatgtatttgggcctcgttgcatttttgtaattttcaatttggtttgttattgtttttttctagtggttgcttggttaaaaataagtcccccctctgttgggcgggggtgtgggtgtgtccggtctgagtcgatgccgttgttctggtgtcatggtcgttttgtagttccatctctatggcttagtctgttgactatgctgcctgttcttcaacgtgacgaggaattacccttacacgtggtctgcttattttgggacacggtgtcggaaagggtgatgcgattcttcgtcaggttgggtgcagggttgtatctttgcactagagtttggttactgctctctgtagcccgcttgaatgggcgtaattggtggtcggggtttggacttgtttggttcatgaaggtcatttcatatgacctccttgtcacctatggtgtttctgaggttgtgcgcgacccatcaatcattcgatctgtggatgagggcagagaagggttttgggggttgtcagctagcctgggcagagaaggagaaggatccacctgtcattggagggccaccaaactgcaaaactctaagggcagagatggtcgtattaggttccatgcatttggctccagaatgagtaatcatgccgcattgagaacacctacctttgagatgctcaaagtgaaacttcaagattggttcaatcccgttctccgatcctctgtcgtgatcgacttctgcatcatgaagcccttttacgccggcacaacactcctctggcacgctccctccaaacactccaaaagggatgcatggatacgtggaatcaaagtcacaaattctaacggtattgattgtgaggattttgattatactacgtctacattgagcttcttcatgcttccttccatggctacatctgagagcttcttctccatctttgctcttctgggtttcggtaaagtcgtcttctttaatggtttcagagctttggggacatcatctaagagctccctgacaaaccatggctgggcagccaagtattatcctttcacagttatccctcagatcttgatgatggaaaagaaagggaagagcagtaaaagtagagagtcagagtttgtgcttcaatgggggaacaagaagacgctgagatatcagaaggtgagggtcaagaaagaacgaagctttgacaacaacaccaaatccaggaaaatcagagactctccctctccactaccacagcgcatcaacaagagctcaccgtcgccaatgaatagtagaattaaagttatttatcacatcgtcggagaaggaagatcggtattttccttgggtttagatgataatggtaagatgttaggattagatcatcatggtcatgcagtggaggataaaggaagcaatgtttggccaaaattgttcccatcattgtctagtaaagaaatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

523

Amino Acids

59.65

Weight (kDa)

9.84

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 554
AccI GTMKAC 1 cut(s) 1001
AccII CGCG 2 cut(s) 88, 585
AciI CCGC 5 cut(s) 16, 34, 235, 481, 768
AclWI GGATC 3 cut(s) 663, 676, 831
AcoI YGGCCR 1 cut(s) 1532
AcsI RAATTY 1 cut(s) 958
AcvI CACGTG 1 cut(s) 370
AfiI CCNNNNNNNGG 7 cut(s) 67, 126, 230, 231, 681, 1150, 1329
AflIII ACRYGT 1 cut(s) 367
AgsI TTSAA 6 cut(s) 169, 344, 487, 812, 823, 1250
AhdI GACNNNNNGTC 1 cut(s) 394
AjnI CCWGG 2 cut(s) 648, 1328
AjuI GAANNNNNNNTTGG 2 cut(s) 1513, 1545
AluBI AGCT 8 cut(s) 56, 644, 1011, 1047, 1109, 1131, 1308, 1380
AluI AGCT 8 cut(s) 56, 644, 1011, 1047, 1109, 1131, 1308, 1380
Alw21I GWGCWC 2 cut(s) 1133, 1382
Alw26I GTCTC 1 cut(s) 1335
AlwI GGATC 3 cut(s) 663, 676, 831
AoxI GGCC 4 cut(s) 117, 143, 687, 1532
ApeKI GCWGC 4 cut(s) 76, 83, 331, 1154
ApoI RAATTY 1 cut(s) 958
AspLEI GCGC 3 cut(s) 88, 585, 1368
AspS9I GGNCC 3 cut(s) 117, 143, 687
AsuHPI GGTGA 4 cut(s) 418, 550, 1297, 1374
AsuNHI GCTAGC 1 cut(s) 644
BalI TGGCCA 1 cut(s) 1534
BamHI GGATCC 1 cut(s) 668
BanII GRGCYC 2 cut(s) 1133, 1382
BarI GAAGNNNNNNTAC 2 cut(s) 860, 892
BbrPI CACGTG 1 cut(s) 370
BbsI GAAGAC 2 cut(s) 1081, 1271
Bbv12I GWGCWC 2 cut(s) 1133, 1382
BbvI GCAGC 4 cut(s) 63, 95, 318, 1166
BccI CCATC 6 cut(s) 310, 598, 713, 1064, 1192, 1555
BceAI ACGGC 1 cut(s) 253
BciT130I CCWGG 2 cut(s) 650, 1330
BciVI GTATCC 1 cut(s) 930
BcoDI GTCTC 1 cut(s) 1335
BfaI CTAG 4 cut(s) 194, 453, 645, 1557
BfmI CTRYAG 1 cut(s) 474
BfuI GTATCC 1 cut(s) 930
BglII AGATCT 1 cut(s) 1188
BisI GCNGC 7 cut(s) 17, 35, 77, 84, 332, 768, 1155
BlsI GCNGC 7 cut(s) 18, 36, 78, 85, 333, 769, 1156
Bme1390I CCNGG 2 cut(s) 650, 1330
BmeRI GACNNNNNGTC 1 cut(s) 394
BmgT120I GGNCC 3 cut(s) 117, 143, 687
BmiI GGNNCC 3 cut(s) 670, 734, 748
BmrFI CCNGG 2 cut(s) 650, 1330
BmrI ACTGGG 1 cut(s) 136
BmsI GCATC 6 cut(s) 255, 399, 783, 870, 919, 1377
BmtI GCTAGC 1 cut(s) 648
BmuI ACTGGG 1 cut(s) 136
BpiI GAAGAC 2 cut(s) 1081, 1271
BpmI CTGGAG 1 cut(s) 733
BsaAI YACGTR 2 cut(s) 370, 941
BsaJI CCNNGG 5 cut(s) 120, 649, 1029, 1144, 1452
BsaWI WCCGGW 1 cut(s) 252
BsaXI ACNNNNNCTCC 2 cut(s) 893, 923
Bsc4I CCNNNNNNNGG 7 cut(s) 67, 126, 230, 231, 681, 1150, 1329
Bse118I RCCGGY 1 cut(s) 881
Bse1I ACTGG 1 cut(s) 131
Bse3DI GCAATG 1 cut(s) 1531
BseBI CCWGG 2 cut(s) 650, 1330
BseDI CCNNGG 5 cut(s) 120, 649, 1029, 1144, 1452
BseGI GGATG 2 cut(s) 616, 934
BseLI CCNNNNNNNGG 7 cut(s) 67, 126, 230, 231, 681, 1150, 1329
BseMI GCAATG 1 cut(s) 1531
BseMII CTCAG 6 cut(s) 18, 249, 564, 1032, 1199, 1262
BseNI ACTGG 1 cut(s) 131
BseRI GAGGAG 1 cut(s) 884
BseXI GCAGC 4 cut(s) 63, 95, 318, 1166
BseYI CCCAGC 1 cut(s) 1149
BsgI GTGCAG 1 cut(s) 453
Bsh1236I CGCG 2 cut(s) 88, 585
BshFI GGCC 4 cut(s) 119, 145, 689, 1534
BsiHKAI GWGCWC 2 cut(s) 1133, 1382
BsiSI CCGG 3 cut(s) 61, 253, 882
BslFI GGGAC 3 cut(s) 204, 401, 1129
BslI CCNNNNNNNGG 7 cut(s) 67, 126, 230, 231, 681, 1150, 1329
BsmAI GTCTC 1 cut(s) 1335
BsmFI GGGAC 3 cut(s) 204, 401, 1129
BsnI GGCC 4 cut(s) 119, 145, 689, 1534
Bsp1286I GDGCHC 2 cut(s) 1133, 1382
Bsp143I GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
Bsp19I CCATGG 2 cut(s) 1029, 1144
BspACI CCGC 5 cut(s) 16, 34, 235, 481, 768
BspANI GGCC 4 cut(s) 119, 145, 689, 1534
BspCNI CTCAG 6 cut(s) 19, 250, 565, 1033, 1198, 1263
BspFNI CGCG 2 cut(s) 88, 585
BspHI TCATGA 2 cut(s) 528, 864
BspLI GGNNCC 3 cut(s) 670, 734, 748
BspOI GCTAGC 1 cut(s) 648
BspPI GGATC 3 cut(s) 663, 676, 831
BspQI GCTCTTC 2 cut(s) 1071, 1208
BsrDI GCAATG 1 cut(s) 1531
BsrFI RCCGGY 1 cut(s) 881
BsrI ACTGG 1 cut(s) 131
BssAI RCCGGY 1 cut(s) 881
BssECI CCNNGG 5 cut(s) 120, 649, 1029, 1144, 1452
BssMI GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
BssT1I CCWWGG 4 cut(s) 120, 1029, 1144, 1452
Bst2UI CCWGG 2 cut(s) 650, 1330
Bst4CI ACNGT 4 cut(s) 394, 968, 1177, 1386
Bst6I CTCTTC 2 cut(s) 1071, 1208
BstBAI YACGTR 2 cut(s) 370, 941
BstC8I GCNNGC 6 cut(s) 58, 81, 481, 646, 883, 903
BstDEI CTNAG 9 cut(s) 27, 258, 314, 573, 708, 1041, 1125, 1185, 1271
BstDSI CCRYGG 2 cut(s) 1029, 1144
BstF5I GGATG 2 cut(s) 616, 934
BstFNI CGCG 2 cut(s) 88, 585
BstHHI GCGC 3 cut(s) 88, 585, 1368
BstKTI GATC 7 cut(s) 605, 671, 839, 852, 1191, 1442, 1492
BstMAI GTCTC 1 cut(s) 1335
BstMBI GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNI CCWGG 2 cut(s) 650, 1330
BstSCI CCNGG 2 cut(s) 648, 1328
BstSFI CTRYAG 1 cut(s) 474
BstUI CGCG 2 cut(s) 88, 585
BstV1I GCAGC 4 cut(s) 63, 95, 318, 1166
BstV2I GAAGAC 2 cut(s) 1081, 1271
BstX2I RGATCY 2 cut(s) 668, 1188
BstXI CCANNNNNNTGG 2 cut(s) 309, 743
BstYI RGATCY 2 cut(s) 668, 1188
BsuI GTATCC 1 cut(s) 930
BsuRI GGCC 4 cut(s) 119, 145, 689, 1534
BtgI CCRYGG 2 cut(s) 1029, 1144
BtsCI GGATG 2 cut(s) 616, 934
BtsI GCAGTG 1 cut(s) 1512
BtsIMutI CAGTG 1 cut(s) 1512
Cac8I GCNNGC 6 cut(s) 58, 81, 481, 646, 883, 903
CciI TCATGA 2 cut(s) 528, 864
CfoI GCGC 3 cut(s) 88, 585, 1368
Cfr10I RCCGGY 1 cut(s) 881
Cfr13I GGNCC 3 cut(s) 117, 143, 687
CseI GACGC 1 cut(s) 1276
DdeI CTNAG 9 cut(s) 27, 258, 314, 573, 708, 1041, 1125, 1185, 1271
DpnI GATC 7 cut(s) 604, 670, 838, 851, 1190, 1441, 1491
DpnII GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
DrdI GACNNNNNNGTC 1 cut(s) 554
DriI GACNNNNNGTC 1 cut(s) 394
DseDI GACNNNNNNGTC 1 cut(s) 554
EaeI YGGCCR 1 cut(s) 1532
Eam1104I CTCTTC 2 cut(s) 1071, 1208
Eam1105I GACNNNNNGTC 1 cut(s) 394
EarI CTCTTC 2 cut(s) 1071, 1208
Ecl136II GAGCTC 2 cut(s) 1131, 1380
Eco130I CCWWGG 4 cut(s) 120, 1029, 1144, 1452
Eco24I GRGCYC 2 cut(s) 1133, 1382
Eco32I GATATC 1 cut(s) 1277
Eco53kI GAGCTC 2 cut(s) 1131, 1380
Eco72I CACGTG 1 cut(s) 370
EcoICRI GAGCTC 2 cut(s) 1131, 1380
EcoRII CCWGG 2 cut(s) 648, 1328
EcoRV GATATC 1 cut(s) 1277
EcoT14I CCWWGG 4 cut(s) 120, 1029, 1144, 1452
EcoT22I ATGCAT 2 cut(s) 742, 934
EcoT38I GRGCYC 2 cut(s) 1133, 1382
ErhI CCWWGG 4 cut(s) 120, 1029, 1144, 1452
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 3 cut(s) 204, 401, 1129
FauI CCCGC 2 cut(s) 228, 488
FauNDI CATATG 1 cut(s) 544
FblI GTMKAC 1 cut(s) 1001
Fnu4HI GCNGC 7 cut(s) 17, 35, 77, 84, 332, 768, 1155
FokI GGATG 2 cut(s) 623, 941
FriOI GRGCYC 2 cut(s) 1133, 1382
Fsp4HI GCNGC 7 cut(s) 17, 35, 77, 84, 332, 768, 1155
FspBI CTAG 4 cut(s) 194, 453, 645, 1557
GlaI GCGC 3 cut(s) 87, 584, 1367
GluI GCNGC 7 cut(s) 17, 35, 77, 84, 332, 768, 1155
GsaI CCCAGC 1 cut(s) 1153
GsuI CTGGAG 1 cut(s) 733
HaeIII GGCC 4 cut(s) 119, 145, 689, 1534
HapII CCGG 3 cut(s) 61, 253, 882
HgaI GACGC 1 cut(s) 1276
HhaI GCGC 3 cut(s) 88, 585, 1368
Hin6I GCGC 3 cut(s) 86, 583, 1366
HinP1I GCGC 3 cut(s) 86, 583, 1366
HincII GTYRAC 1 cut(s) 324
HindII GTYRAC 1 cut(s) 324
HindIII AAGCTT 1 cut(s) 1306
HinfI GANTC 5 cut(s) 260, 414, 945, 1232, 1343
HpaII CCGG 3 cut(s) 61, 253, 882
HphI GGTGA 4 cut(s) 418, 550, 1297, 1374
Hpy166II GTNNAC 2 cut(s) 324, 1002
Hpy188III TCNNGA 7 cut(s) 529, 750, 812, 847, 865, 1192, 1294
Hpy8I GTNNAC 2 cut(s) 324, 1002
Hpy99I CGWCG 2 cut(s) 1390, 1430
HpyAV CCTTC 7 cut(s) 526, 617, 653, 659, 1035, 1276, 1427
HpyCH4III ACNGT 4 cut(s) 394, 968, 1177, 1386
HpyCH4IV ACGT 4 cut(s) 346, 369, 940, 998
HpyCH4V TGCA 9 cut(s) 83, 153, 434, 450, 700, 740, 861, 932, 1505
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpyF3I CTNAG 9 cut(s) 27, 258, 314, 573, 708, 1041, 1125, 1185, 1271
HpySE526I ACGT 4 cut(s) 346, 369, 940, 998
HspAI GCGC 3 cut(s) 86, 583, 1366
KroI GCCGGC 1 cut(s) 881
KroNI GCCGGC 1 cut(s) 883
Kzo9I GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
LguI GCTCTTC 2 cut(s) 1071, 1208
LmnI GCTCC 4 cut(s) 53, 752, 910, 1136
Lsp1109I GCAGC 4 cut(s) 63, 95, 318, 1166
LweI GCATC 6 cut(s) 255, 399, 783, 870, 919, 1377
MaeI CTAG 4 cut(s) 194, 453, 645, 1557
MaeII ACGT 4 cut(s) 346, 369, 940, 998
MaeIII GTNAC 4 cut(s) 347, 462, 556, 952
MalI GATC 7 cut(s) 604, 670, 838, 851, 1190, 1441, 1491
MboI GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
MboII GAAGA 9 cut(s) 332, 409, 1006, 1042, 1058, 1081, 1225, 1276, 1449
MflI RGATCY 2 cut(s) 668, 1188
MhlI GDGCHC 2 cut(s) 1133, 1382
MlsI TGGCCA 1 cut(s) 1534
MluCI AATT 7 cut(s) 162, 169, 356, 496, 958, 1404, 1538
MluNI TGGCCA 1 cut(s) 1534
MlyI GAGTC 3 cut(s) 269, 1241, 1337
MmeI TCCRAC 3 cut(s) 31, 378, 1408
Mox20I TGGCCA 1 cut(s) 1534
Mph1103I ATGCAT 2 cut(s) 742, 934
MroNI GCCGGC 1 cut(s) 881
MscI TGGCCA 1 cut(s) 1534
MseI TTAA 3 cut(s) 209, 1095, 1407
MslI CAYNNNNRTG 2 cut(s) 307, 1500
Msp20I TGGCCA 1 cut(s) 1534
MspI CCGG 3 cut(s) 61, 253, 882
MspR9I CCNGG 2 cut(s) 650, 1330
MvaI CCWGG 2 cut(s) 650, 1330
MvnI CGCG 2 cut(s) 88, 585
MwoI GCNNNNNNNGC 1 cut(s) 85
NaeI GCCGGC 1 cut(s) 883
NcoI CCATGG 2 cut(s) 1029, 1144
NdeI CATATG 1 cut(s) 544
NdeII GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
NgoMIV GCCGGC 1 cut(s) 881
NheI GCTAGC 1 cut(s) 644
NlaIV GGNNCC 3 cut(s) 670, 734, 748
NmuCI GTSAC 3 cut(s) 347, 556, 952
NsiI ATGCAT 2 cut(s) 742, 934
PagI TCATGA 2 cut(s) 528, 864
PciSI GCTCTTC 2 cut(s) 1071, 1208
PcsI WCGNNNNNNNCGW 1 cut(s) 1083
PdiI GCCGGC 1 cut(s) 883
PfeI GAWTC 2 cut(s) 414, 945
PfoI TCCNGGA 1 cut(s) 1328
PkrI GCNGC 7 cut(s) 18, 36, 78, 85, 333, 769, 1156
PleI GAGTC 3 cut(s) 268, 1240, 1337
PmaCI CACGTG 1 cut(s) 370
PmlI CACGTG 1 cut(s) 370
PpsI GAGTC 3 cut(s) 268, 1240, 1337
Ppu21I YACGTR 2 cut(s) 370, 941
Psp124BI GAGCTC 2 cut(s) 1133, 1382
Psp6I CCWGG 2 cut(s) 648, 1328
PspCI CACGTG 1 cut(s) 370
PspFI CCCAGC 1 cut(s) 1149
PspGI CCWGG 2 cut(s) 648, 1328
PspN4I GGNNCC 3 cut(s) 670, 734, 748
PspPI GGNCC 3 cut(s) 117, 143, 687
PsuI RGATCY 2 cut(s) 668, 1188
RseI CAYNNNNRTG 2 cut(s) 307, 1500
SacI GAGCTC 2 cut(s) 1133, 1382
SapI GCTCTTC 2 cut(s) 1071, 1208
SaqAI TTAA 3 cut(s) 209, 1095, 1407
SatI GCNGC 7 cut(s) 17, 35, 77, 84, 332, 768, 1155
Sau3AI GATC 7 cut(s) 602, 668, 836, 849, 1188, 1439, 1489
Sau96I GGNCC 3 cut(s) 117, 143, 687
SchI GAGTC 3 cut(s) 269, 1241, 1337
ScrFI CCNGG 2 cut(s) 650, 1330
SduI GDGCHC 2 cut(s) 1133, 1382
SfaNI GCATC 6 cut(s) 255, 399, 783, 870, 919, 1377
SfcI CTRYAG 1 cut(s) 474
SmiMI CAYNNNNRTG 2 cut(s) 307, 1500
Sse9I AATT 7 cut(s) 162, 169, 356, 496, 958, 1404, 1538
SsiI CCGC 5 cut(s) 16, 34, 235, 481, 768
SspMI CTAG 4 cut(s) 194, 453, 645, 1557
SstI GAGCTC 2 cut(s) 1133, 1382
StyD4I CCNGG 2 cut(s) 648, 1328
StyI CCWWGG 4 cut(s) 120, 1029, 1144, 1452
TaaI ACNGT 4 cut(s) 394, 968, 1177, 1386
TaiI ACGT 4 cut(s) 349, 372, 943, 1001
TaqI TCGA 3 cut(s) 263, 601, 852
TasI AATT 7 cut(s) 162, 169, 356, 496, 958, 1404, 1538
TauI GCSGC 3 cut(s) 19, 37, 770
TfiI GAWTC 2 cut(s) 414, 945
Tru1I TTAA 3 cut(s) 209, 1095, 1407
Tru9I TTAA 3 cut(s) 209, 1095, 1407
TscAI CASTG 1 cut(s) 1512
TseFI GTSAC 3 cut(s) 347, 556, 952
TseI GCWGC 4 cut(s) 76, 83, 331, 1154
Tsp45I GTSAC 3 cut(s) 347, 556, 952
TspDTI ATGAA 6 cut(s) 517, 531, 545, 881, 1006, 1409
TspRI CASTG 1 cut(s) 1512
XapI RAATTY 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 1001
XspI CTAG 4 cut(s) 194, 453, 645, 1557
Zsp2I ATGCAT 2 cut(s) 742, 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.