Protein trichome birefringence-like 5
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20590 AT5G20590 |
| fragaria_vesca | FvH4_4g06600 |
| malus_domestica | MD16G1241800.v1.1 |
| prunus_persica | Prupe.1G068600_v2.0.a1 Prupe.1G068600_v2.0.a1 |
| pyrus_communis | pycom16g20260 |
| rosa_chinensis | RchiOBHm_Chr4g0398501 RchiOBHm_Chr4g0398521 |
| rosa_laevigata | RLG00000009351 RLG00000009358 |
| rosa_multiflora | Rmu_sc0007985.1_g000006 Rmu_ssc0000240.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00343470 Rroxscaffold_5G00343480 |
| rosa_rugosa | Rorug04G0008800 |
| rosa_samantha | Rh4AG086900 Rh4BG083500 Rh4CG094900 Rh4CG095000 Rh4DG078300 |
| rosa_wichuraiana | Rw4G007240 Rw4G007250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1001 |
| AciI | CCGC | 4 cut(s) | 542, 631, 913, 1375 |
| AclI | AACGTT | 1 cut(s) | 979 |
| AclWI | GGATC | 1 cut(s) | 963 |
| AcoI | YGGCCR | 3 cut(s) | 808, 1015, 1384 |
| AcsI | RAATTY | 5 cut(s) | 492, 848, 875, 931, 1088 |
| AcuI | CTGAAG | 2 cut(s) | 452, 1142 |
| AdeI | CACNNNGTG | 1 cut(s) | 335 |
| AfaI | GTAC | 4 cut(s) | 509, 868, 1190, 1522 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 732, 1113, 1266 |
| AgsI | TTSAA | 6 cut(s) | 219, 374, 847, 936, 1294, 1351 |
| AjnI | CCWGG | 5 cut(s) | 315, 852, 1127, 1418, 1450 |
| AluBI | AGCT | 6 cut(s) | 581, 974, 1137, 1147, 1284, 1477 |
| AluI | AGCT | 6 cut(s) | 581, 974, 1137, 1147, 1284, 1477 |
| Alw26I | GTCTC | 1 cut(s) | 603 |
| AlwI | GGATC | 1 cut(s) | 963 |
| AoxI | GGCC | 6 cut(s) | 808, 1015, 1104, 1116, 1269, 1384 |
| ApaI | GGGCCC | 1 cut(s) | 1120 |
| ApeKI | GCWGC | 1 cut(s) | 1434 |
| ApoI | RAATTY | 5 cut(s) | 492, 848, 875, 931, 1088 |
| AspS9I | GGNCC | 4 cut(s) | 802, 1116, 1117, 1269 |
| AsuC2I | CCSGG | 1 cut(s) | 555 |
| AsuHPI | GGTGA | 8 cut(s) | 64, 79, 94, 470, 500, 535, 697, 1256 |
| AsuNHI | GCTAGC | 1 cut(s) | 1133 |
| AvaII | GGWCC | 1 cut(s) | 802 |
| BaeGI | GKGCMC | 1 cut(s) | 1120 |
| BalI | TGGCCA | 2 cut(s) | 1017, 1386 |
| BanII | GRGCYC | 3 cut(s) | 115, 123, 1120 |
| BauI | CACGAG | 1 cut(s) | 1044 |
| BbsI | GAAGAC | 3 cut(s) | 91, 426, 1130 |
| BbvI | GCAGC | 1 cut(s) | 1446 |
| BccI | CCATC | 4 cut(s) | 470, 1376, 1395, 1399 |
| BceAI | ACGGC | 3 cut(s) | 27, 661, 823 |
| BciT130I | CCWGG | 5 cut(s) | 317, 854, 1129, 1420, 1452 |
| BcnI | CCSGG | 1 cut(s) | 555 |
| BcoDI | GTCTC | 1 cut(s) | 603 |
| BfaI | CTAG | 2 cut(s) | 713, 1134 |
| BfmI | CTRYAG | 3 cut(s) | 264, 1108, 1432 |
| BglII | AGATCT | 1 cut(s) | 367 |
| BisI | GCNGC | 1 cut(s) | 1435 |
| BlsI | GCNGC | 1 cut(s) | 1436 |
| Bme1390I | CCNGG | 6 cut(s) | 317, 555, 854, 1129, 1420, 1452 |
| Bme18I | GGWCC | 1 cut(s) | 802 |
| BmgT120I | GGNCC | 4 cut(s) | 802, 1116, 1117, 1269 |
| BmiI | GGNNCC | 6 cut(s) | 321, 737, 1118, 1270, 1335, 1414 |
| BmrFI | CCNGG | 6 cut(s) | 317, 555, 854, 1129, 1420, 1452 |
| BmrI | ACTGGG | 3 cut(s) | 12, 318, 1275 |
| BmsI | GCATC | 4 cut(s) | 699, 1084, 1106, 1453 |
| BmtI | GCTAGC | 1 cut(s) | 1137 |
| BmuI | ACTGGG | 3 cut(s) | 12, 318, 1275 |
| BpiI | GAAGAC | 3 cut(s) | 91, 426, 1130 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1062, 1094 |
| BpmI | CTGGAG | 1 cut(s) | 1473 |
| Bpu10I | CCTNAGC | 1 cut(s) | 924 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BpuMI | CCSGG | 1 cut(s) | 555 |
| BsaAI | YACGTR | 1 cut(s) | 511 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1386 |
| BsaJI | CCNNGG | 5 cut(s) | 315, 659, 805, 822, 1128 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 732, 1113, 1266 |
| Bse1I | ACTGG | 8 cut(s) | 18, 324, 739, 1018, 1025, 1270, 1281, 1337 |
| Bse3DI | GCAATG | 2 cut(s) | 604, 1246 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1386 |
| BseBI | CCWGG | 5 cut(s) | 317, 854, 1129, 1420, 1452 |
| BseDI | CCNNGG | 5 cut(s) | 315, 659, 805, 822, 1128 |
| BseGI | GGATG | 2 cut(s) | 1315, 1387 |
| BseJI | GATNNNNATC | 1 cut(s) | 1386 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 732, 1113, 1266 |
| BseMI | GCAATG | 2 cut(s) | 604, 1246 |
| BseMII | CTCAG | 3 cut(s) | 606, 938, 1092 |
| BseNI | ACTGG | 8 cut(s) | 18, 324, 739, 1018, 1025, 1270, 1281, 1337 |
| BseRI | GAGGAG | 2 cut(s) | 619, 752 |
| BseSI | GKGCMC | 1 cut(s) | 1120 |
| BseXI | GCAGC | 1 cut(s) | 1446 |
| BseYI | CCCAGC | 1 cut(s) | 1137 |
| BsgI | GTGCAG | 2 cut(s) | 243, 288 |
| BshFI | GGCC | 6 cut(s) | 810, 1017, 1106, 1118, 1271, 1386 |
| BsiSI | CCGG | 1 cut(s) | 554 |
| BslFI | GGGAC | 2 cut(s) | 229, 1442 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 732, 1113, 1266 |
| BsmAI | GTCTC | 1 cut(s) | 603 |
| BsmFI | GGGAC | 2 cut(s) | 229, 1442 |
| BsnI | GGCC | 6 cut(s) | 810, 1017, 1106, 1118, 1271, 1386 |
| Bsp120I | GGGCCC | 1 cut(s) | 1116 |
| Bsp1286I | GDGCHC | 3 cut(s) | 115, 123, 1120 |
| Bsp143I | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| BspACI | CCGC | 4 cut(s) | 542, 631, 913, 1375 |
| BspANI | GGCC | 6 cut(s) | 810, 1017, 1106, 1118, 1271, 1386 |
| BspCNI | CTCAG | 3 cut(s) | 607, 937, 1093 |
| BspLI | GGNNCC | 6 cut(s) | 321, 737, 1118, 1270, 1335, 1414 |
| BspMAI | CTGCAG | 1 cut(s) | 1436 |
| BspOI | GCTAGC | 1 cut(s) | 1137 |
| BspPI | GGATC | 1 cut(s) | 963 |
| BsrDI | GCAATG | 2 cut(s) | 604, 1246 |
| BsrI | ACTGG | 8 cut(s) | 18, 324, 739, 1018, 1025, 1270, 1281, 1337 |
| BssECI | CCNNGG | 5 cut(s) | 315, 659, 805, 822, 1128 |
| BssMI | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| BssSI | CACGAG | 1 cut(s) | 1044 |
| BssT1I | CCWWGG | 2 cut(s) | 659, 822 |
| Bst2BI | CACGAG | 1 cut(s) | 1044 |
| Bst2UI | CCWGG | 5 cut(s) | 317, 854, 1129, 1420, 1452 |
| Bst4CI | ACNGT | 4 cut(s) | 866, 871, 1403, 1525 |
| Bst6I | CTCTTC | 7 cut(s) | 83, 89, 169, 220, 823, 1198, 1511 |
| BstBAI | YACGTR | 1 cut(s) | 511 |
| BstC8I | GCNNGC | 1 cut(s) | 1135 |
| BstDEI | CTNAG | 3 cut(s) | 615, 924, 1101 |
| BstDSI | CCRYGG | 1 cut(s) | 805 |
| BstF5I | GGATG | 2 cut(s) | 1315, 1387 |
| BstKTI | GATC | 5 cut(s) | 370, 400, 655, 958, 1176 |
| BstMAI | GTCTC | 1 cut(s) | 603 |
| BstMBI | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 56, 266, 541, 1103, 1383 |
| BstNI | CCWGG | 5 cut(s) | 317, 854, 1129, 1420, 1452 |
| BstSCI | CCNGG | 6 cut(s) | 315, 553, 852, 1127, 1418, 1450 |
| BstSFI | CTRYAG | 3 cut(s) | 264, 1108, 1432 |
| BstSLI | GKGCMC | 1 cut(s) | 1120 |
| BstV1I | GCAGC | 1 cut(s) | 1446 |
| BstV2I | GAAGAC | 3 cut(s) | 91, 426, 1130 |
| BstX2I | RGATCY | 1 cut(s) | 367 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 455, 599 |
| BstYI | RGATCY | 1 cut(s) | 367 |
| BsuRI | GGCC | 6 cut(s) | 810, 1017, 1106, 1118, 1271, 1386 |
| BtgI | CCRYGG | 1 cut(s) | 805 |
| BtgZI | GCGATG | 2 cut(s) | 40, 360 |
| BtsCI | GGATG | 2 cut(s) | 1315, 1387 |
| BtsI | GCAGTG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 4 cut(s) | 12, 1018, 1263, 1344 |
| Cac8I | GCNNGC | 1 cut(s) | 1135 |
| Cfr13I | GGNCC | 4 cut(s) | 802, 1116, 1117, 1269 |
| Csp6I | GTAC | 4 cut(s) | 508, 867, 1189, 1521 |
| CviAII | CATG | 5 cut(s) | 561, 727, 1031, 1236, 1467 |
| CviQI | GTAC | 4 cut(s) | 508, 867, 1189, 1521 |
| DdeI | CTNAG | 3 cut(s) | 615, 924, 1101 |
| DpnI | GATC | 5 cut(s) | 369, 399, 654, 957, 1175 |
| DpnII | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| DraIII | CACNNNGTG | 1 cut(s) | 335 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1001 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1001 |
| EaeI | YGGCCR | 3 cut(s) | 808, 1015, 1384 |
| Eam1104I | CTCTTC | 7 cut(s) | 83, 89, 169, 220, 823, 1198, 1511 |
| EarI | CTCTTC | 7 cut(s) | 83, 89, 169, 220, 823, 1198, 1511 |
| Eco130I | CCWWGG | 2 cut(s) | 659, 822 |
| Eco147I | AGGCCT | 1 cut(s) | 1106 |
| Eco24I | GRGCYC | 3 cut(s) | 115, 123, 1120 |
| Eco32I | GATATC | 1 cut(s) | 819 |
| Eco47I | GGWCC | 1 cut(s) | 802 |
| Eco57I | CTGAAG | 2 cut(s) | 452, 1142 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1117 |
| EcoRI | GAATTC | 1 cut(s) | 931 |
| EcoRII | CCWGG | 5 cut(s) | 315, 852, 1127, 1418, 1450 |
| EcoRV | GATATC | 1 cut(s) | 819 |
| EcoT14I | CCWWGG | 2 cut(s) | 659, 822 |
| EcoT22I | ATGCAT | 2 cut(s) | 1099, 1468 |
| EcoT38I | GRGCYC | 3 cut(s) | 115, 123, 1120 |
| ErhI | CCWWGG | 2 cut(s) | 659, 822 |
| FaeI | CATG | 5 cut(s) | 564, 730, 1034, 1239, 1470 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 131, 163 |
| FaqI | GGGAC | 2 cut(s) | 229, 1442 |
| FatI | CATG | 5 cut(s) | 560, 726, 1030, 1235, 1466 |
| FauI | CCCGC | 1 cut(s) | 549 |
| Fnu4HI | GCNGC | 1 cut(s) | 1435 |
| FokI | GGATG | 2 cut(s) | 1322, 1374 |
| FriOI | GRGCYC | 3 cut(s) | 115, 123, 1120 |
| Fsp4HI | GCNGC | 1 cut(s) | 1435 |
| FspBI | CTAG | 2 cut(s) | 713, 1134 |
| GluI | GCNGC | 1 cut(s) | 1435 |
| GsaI | CCCAGC | 1 cut(s) | 1141 |
| GsuI | CTGGAG | 1 cut(s) | 1473 |
| HaeIII | GGCC | 6 cut(s) | 810, 1017, 1106, 1118, 1271, 1386 |
| HapII | CCGG | 1 cut(s) | 554 |
| Hin1II | CATG | 5 cut(s) | 564, 730, 1034, 1239, 1470 |
| HincII | GTYRAC | 1 cut(s) | 1365 |
| HindII | GTYRAC | 1 cut(s) | 1365 |
| HindIII | AAGCTT | 1 cut(s) | 579 |
| HpaII | CCGG | 1 cut(s) | 554 |
| HphI | GGTGA | 8 cut(s) | 64, 79, 94, 470, 500, 535, 697, 1256 |
| Hpy166II | GTNNAC | 4 cut(s) | 329, 805, 1026, 1365 |
| Hpy188I | TCNGA | 5 cut(s) | 616, 735, 767, 1102, 1208 |
| Hpy188III | TCNNGA | 3 cut(s) | 330, 371, 401 |
| Hpy8I | GTNNAC | 4 cut(s) | 329, 805, 1026, 1365 |
| HpyCH4III | ACNGT | 4 cut(s) | 866, 871, 1403, 1525 |
| HpyCH4IV | ACGT | 2 cut(s) | 510, 979 |
| HpyCH4V | TGCA | 9 cut(s) | 260, 305, 358, 388, 671, 1097, 1239, 1434, 1466 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 56, 266, 541, 1103, 1383 |
| HpyF3I | CTNAG | 3 cut(s) | 615, 924, 1101 |
| HpySE526I | ACGT | 2 cut(s) | 510, 979 |
| Hsp92II | CATG | 5 cut(s) | 564, 730, 1034, 1239, 1470 |
| Kzo9I | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| LmnI | GCTCC | 1 cut(s) | 294 |
| Lsp1109I | GCAGC | 1 cut(s) | 1446 |
| LweI | GCATC | 4 cut(s) | 699, 1084, 1106, 1453 |
| MaeI | CTAG | 2 cut(s) | 713, 1134 |
| MaeII | ACGT | 2 cut(s) | 510, 979 |
| MaeIII | GTNAC | 2 cut(s) | 44, 1354 |
| MalI | GATC | 5 cut(s) | 369, 399, 654, 957, 1175 |
| MboI | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| MflI | RGATCY | 1 cut(s) | 367 |
| MhlI | GDGCHC | 3 cut(s) | 115, 123, 1120 |
| MlsI | TGGCCA | 2 cut(s) | 1017, 1386 |
| MluCI | AATT | 9 cut(s) | 22, 226, 492, 848, 875, 931, 960, 1088, 1369 |
| MluNI | TGGCCA | 2 cut(s) | 1017, 1386 |
| MlyI | GAGTC | 6 cut(s) | 446, 605, 755, 918, 1021, 1464 |
| MmeI | TCCRAC | 2 cut(s) | 962, 965 |
| Mox20I | TGGCCA | 2 cut(s) | 1017, 1386 |
| Mph1103I | ATGCAT | 2 cut(s) | 1099, 1468 |
| MscI | TGGCCA | 2 cut(s) | 1017, 1386 |
| MseI | TTAA | 4 cut(s) | 666, 918, 1008, 1149 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1443 |
| Msp20I | TGGCCA | 2 cut(s) | 1017, 1386 |
| MspI | CCGG | 1 cut(s) | 554 |
| MspR9I | CCNGG | 6 cut(s) | 317, 555, 854, 1129, 1420, 1452 |
| MvaI | CCWGG | 5 cut(s) | 317, 854, 1129, 1420, 1452 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 56, 266, 541, 1103, 1383 |
| NciI | CCSGG | 1 cut(s) | 555 |
| NdeII | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| NheI | GCTAGC | 1 cut(s) | 1133 |
| NlaIII | CATG | 5 cut(s) | 564, 730, 1034, 1239, 1470 |
| NlaIV | GGNNCC | 6 cut(s) | 321, 737, 1118, 1270, 1335, 1414 |
| NmuCI | GTSAC | 1 cut(s) | 1354 |
| NsiI | ATGCAT | 2 cut(s) | 1099, 1468 |
| PceI | AGGCCT | 1 cut(s) | 1106 |
| PfeI | GAWTC | 4 cut(s) | 722, 730, 1156, 1223 |
| PfoI | TCCNGGA | 2 cut(s) | 852, 1450 |
| PkrI | GCNGC | 1 cut(s) | 1436 |
| PleI | GAGTC | 6 cut(s) | 445, 605, 754, 917, 1021, 1463 |
| PpsI | GAGTC | 6 cut(s) | 445, 605, 754, 917, 1021, 1463 |
| Ppu21I | YACGTR | 1 cut(s) | 511 |
| Psp1406I | AACGTT | 1 cut(s) | 979 |
| Psp6I | CCWGG | 5 cut(s) | 315, 852, 1127, 1418, 1450 |
| PspFI | CCCAGC | 1 cut(s) | 1137 |
| PspGI | CCWGG | 5 cut(s) | 315, 852, 1127, 1418, 1450 |
| PspN4I | GGNNCC | 6 cut(s) | 321, 737, 1118, 1270, 1335, 1414 |
| PspOMI | GGGCCC | 1 cut(s) | 1116 |
| PspPI | GGNCC | 4 cut(s) | 802, 1116, 1117, 1269 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1396, 1428 |
| PstI | CTGCAG | 1 cut(s) | 1436 |
| PsuI | RGATCY | 1 cut(s) | 367 |
| RsaI | GTAC | 4 cut(s) | 509, 868, 1190, 1522 |
| RsaNI | GTAC | 4 cut(s) | 508, 867, 1189, 1521 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1443 |
| SaqAI | TTAA | 4 cut(s) | 666, 918, 1008, 1149 |
| SatI | GCNGC | 1 cut(s) | 1435 |
| Sau3AI | GATC | 5 cut(s) | 367, 397, 652, 955, 1173 |
| Sau96I | GGNCC | 4 cut(s) | 802, 1116, 1117, 1269 |
| SchI | GAGTC | 6 cut(s) | 446, 605, 755, 918, 1021, 1464 |
| ScrFI | CCNGG | 6 cut(s) | 317, 555, 854, 1129, 1420, 1452 |
| SduI | GDGCHC | 3 cut(s) | 115, 123, 1120 |
| SfaNI | GCATC | 4 cut(s) | 699, 1084, 1106, 1453 |
| SfcI | CTRYAG | 3 cut(s) | 264, 1108, 1432 |
| SinI | GGWCC | 1 cut(s) | 802 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1443 |
| SmlI | CTYRAG | 1 cut(s) | 116 |
| SmoI | CTYRAG | 1 cut(s) | 116 |
| Sse9I | AATT | 9 cut(s) | 22, 226, 492, 848, 875, 931, 960, 1088, 1369 |
| SseBI | AGGCCT | 1 cut(s) | 1106 |
| SsiI | CCGC | 4 cut(s) | 542, 631, 913, 1375 |
| SspI | AATATT | 1 cut(s) | 753 |
| SspMI | CTAG | 2 cut(s) | 713, 1134 |
| StuI | AGGCCT | 1 cut(s) | 1106 |
| StyD4I | CCNGG | 6 cut(s) | 315, 553, 852, 1127, 1418, 1450 |
| StyI | CCWWGG | 2 cut(s) | 659, 822 |
| TaaI | ACNGT | 4 cut(s) | 866, 871, 1403, 1525 |
| TaiI | ACGT | 2 cut(s) | 513, 982 |
| TaqI | TCGA | 1 cut(s) | 1514 |
| TasI | AATT | 9 cut(s) | 22, 226, 492, 848, 875, 931, 960, 1088, 1369 |
| TatI | WGTACW | 1 cut(s) | 1520 |
| TfiI | GAWTC | 4 cut(s) | 722, 730, 1156, 1223 |
| Tru1I | TTAA | 4 cut(s) | 666, 918, 1008, 1149 |
| Tru9I | TTAA | 4 cut(s) | 666, 918, 1008, 1149 |
| TscAI | CASTG | 4 cut(s) | 12, 1025, 1270, 1344 |
| TseFI | GTSAC | 1 cut(s) | 1354 |
| TseI | GCWGC | 1 cut(s) | 1434 |
| Tsp45I | GTSAC | 1 cut(s) | 1354 |
| TspGWI | ACGGA | 1 cut(s) | 486 |
| TspRI | CASTG | 4 cut(s) | 12, 1025, 1270, 1344 |
| VpaK11BI | GGWCC | 1 cut(s) | 802 |
| XapI | RAATTY | 5 cut(s) | 492, 848, 875, 931, 1088 |
| XspI | CTAG | 2 cut(s) | 713, 1134 |
| Zsp2I | ATGCAT | 2 cut(s) | 1099, 1468 |