Protein trichome birefringence-like 5
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20590 AT5G20590 |
| fragaria_vesca | FvH4_4g06600 |
| malus_domestica | MD16G1241800.v1.1 |
| prunus_persica | Prupe.1G068600_v2.0.a1 Prupe.1G068600_v2.0.a1 |
| pyrus_communis | pycom16g20260 |
| rosa_chinensis | RchiOBHm_Chr4g0398501 RchiOBHm_Chr4g0398521 |
| rosa_laevigata | RLG00000009351 RLG00000009358 |
| rosa_multiflora | Rmu_sc0007985.1_g000006 Rmu_ssc0000240.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00343470 Rroxscaffold_5G00343480 |
| rosa_rugosa | Rorug04G0008800 |
| rosa_samantha | Rh4AG086900 Rh4BG083500 Rh4CG094900 Rh4CG095000 Rh4DG078300 |
| rosa_wichuraiana | Rw4G007240 Rw4G007250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 968 |
| AccI | GTMKAC | 1 cut(s) | 237 |
| AciI | CCGC | 4 cut(s) | 509, 598, 880, 1342 |
| AclI | AACGTT | 1 cut(s) | 946 |
| AclWI | GGATC | 1 cut(s) | 930 |
| AcoI | YGGCCR | 3 cut(s) | 775, 982, 1351 |
| AcsI | RAATTY | 1 cut(s) | 815 |
| AcuI | CTGAAG | 2 cut(s) | 419, 1109 |
| AdeI | CACNNNGTG | 1 cut(s) | 302 |
| AfaI | GTAC | 3 cut(s) | 476, 835, 1157 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 284, 699, 991, 1080, 1233 |
| AgsI | TTSAA | 4 cut(s) | 186, 341, 814, 1318 |
| AjnI | CCWGG | 5 cut(s) | 282, 819, 1094, 1385, 1417 |
| AluBI | AGCT | 6 cut(s) | 548, 801, 1104, 1114, 1251, 1444 |
| AluI | AGCT | 6 cut(s) | 548, 801, 1104, 1114, 1251, 1444 |
| Alw21I | GWGCWC | 1 cut(s) | 1446 |
| Alw26I | GTCTC | 1 cut(s) | 570 |
| AlwI | GGATC | 1 cut(s) | 930 |
| AoxI | GGCC | 6 cut(s) | 775, 982, 1071, 1083, 1236, 1351 |
| ApaI | GGGCCC | 1 cut(s) | 1087 |
| ApoI | RAATTY | 1 cut(s) | 815 |
| AspS9I | GGNCC | 4 cut(s) | 287, 1083, 1084, 1236 |
| AsuC2I | CCSGG | 1 cut(s) | 522 |
| AsuHPI | GGTGA | 8 cut(s) | 64, 79, 94, 437, 458, 467, 502, 664 |
| AsuNHI | GCTAGC | 1 cut(s) | 1100 |
| AvaII | GGWCC | 1 cut(s) | 287 |
| BaeGI | GKGCMC | 1 cut(s) | 1087 |
| BalI | TGGCCA | 3 cut(s) | 777, 984, 1353 |
| BanII | GRGCYC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| BauI | CACGAG | 1 cut(s) | 1011 |
| BbsI | GAAGAC | 4 cut(s) | 91, 393, 1097, 1401 |
| Bbv12I | GWGCWC | 1 cut(s) | 1446 |
| BccI | CCATC | 4 cut(s) | 437, 1343, 1362, 1366 |
| BceAI | ACGGC | 2 cut(s) | 27, 628 |
| BciT130I | CCWGG | 5 cut(s) | 284, 821, 1096, 1387, 1419 |
| BcnI | CCSGG | 1 cut(s) | 522 |
| BcoDI | GTCTC | 1 cut(s) | 570 |
| BfaI | CTAG | 1 cut(s) | 1101 |
| BfmI | CTRYAG | 2 cut(s) | 231, 1399 |
| BglII | AGATCT | 1 cut(s) | 334 |
| Bme1390I | CCNGG | 6 cut(s) | 284, 522, 821, 1096, 1387, 1419 |
| Bme18I | GGWCC | 1 cut(s) | 287 |
| BmgT120I | GGNCC | 4 cut(s) | 287, 1083, 1084, 1236 |
| BmiI | GGNNCC | 6 cut(s) | 288, 289, 704, 1085, 1237, 1302 |
| BmrFI | CCNGG | 6 cut(s) | 284, 522, 821, 1096, 1387, 1419 |
| BmrI | ACTGGG | 2 cut(s) | 12, 285 |
| BmsI | GCATC | 2 cut(s) | 666, 1420 |
| BmtI | GCTAGC | 1 cut(s) | 1104 |
| BmuI | ACTGGG | 2 cut(s) | 12, 285 |
| BpiI | GAAGAC | 4 cut(s) | 91, 393, 1097, 1401 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1029, 1061 |
| BpmI | CTGGAG | 1 cut(s) | 1440 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BpuMI | CCSGG | 1 cut(s) | 522 |
| BsaAI | YACGTR | 1 cut(s) | 478 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1353 |
| BsaJI | CCNNGG | 4 cut(s) | 282, 283, 626, 1095 |
| BsaWI | WCCGGW | 1 cut(s) | 699 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 833, 863 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 284, 699, 991, 1080, 1233 |
| Bse1I | ACTGG | 7 cut(s) | 18, 291, 706, 985, 992, 1248, 1304 |
| Bse3DI | GCAATG | 2 cut(s) | 571, 1213 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1353 |
| BseBI | CCWGG | 5 cut(s) | 284, 821, 1096, 1387, 1419 |
| BseDI | CCNNGG | 4 cut(s) | 282, 283, 626, 1095 |
| BseGI | GGATG | 3 cut(s) | 1282, 1354, 1354 |
| BseJI | GATNNNNATC | 1 cut(s) | 1353 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 284, 699, 991, 1080, 1233 |
| BseMI | GCAATG | 2 cut(s) | 571, 1213 |
| BseMII | CTCAG | 2 cut(s) | 573, 1059 |
| BseNI | ACTGG | 7 cut(s) | 18, 291, 706, 985, 992, 1248, 1304 |
| BseRI | GAGGAG | 2 cut(s) | 586, 719 |
| BseSI | GKGCMC | 1 cut(s) | 1087 |
| BseYI | CCCAGC | 1 cut(s) | 1104 |
| BsgI | GTGCAG | 2 cut(s) | 210, 255 |
| BshFI | GGCC | 6 cut(s) | 777, 984, 1073, 1085, 1238, 1353 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1446 |
| BsiSI | CCGG | 2 cut(s) | 521, 700 |
| BslFI | GGGAC | 3 cut(s) | 196, 300, 1409 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 284, 699, 991, 1080, 1233 |
| BsmAI | GTCTC | 1 cut(s) | 570 |
| BsmFI | GGGAC | 3 cut(s) | 196, 300, 1409 |
| BsmI | GAATGC | 1 cut(s) | 943 |
| BsnI | GGCC | 6 cut(s) | 777, 984, 1073, 1085, 1238, 1353 |
| Bsp120I | GGGCCC | 1 cut(s) | 1083 |
| Bsp1286I | GDGCHC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| Bsp143I | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| BspACI | CCGC | 4 cut(s) | 509, 598, 880, 1342 |
| BspANI | GGCC | 6 cut(s) | 777, 984, 1073, 1085, 1238, 1353 |
| BspCNI | CTCAG | 2 cut(s) | 574, 1060 |
| BspLI | GGNNCC | 6 cut(s) | 288, 289, 704, 1085, 1237, 1302 |
| BspOI | GCTAGC | 1 cut(s) | 1104 |
| BspPI | GGATC | 1 cut(s) | 930 |
| BsrDI | GCAATG | 2 cut(s) | 571, 1213 |
| BsrI | ACTGG | 7 cut(s) | 18, 291, 706, 985, 992, 1248, 1304 |
| BssECI | CCNNGG | 4 cut(s) | 282, 283, 626, 1095 |
| BssMI | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| BssSI | CACGAG | 1 cut(s) | 1011 |
| BssT1I | CCWWGG | 1 cut(s) | 626 |
| Bst2BI | CACGAG | 1 cut(s) | 1011 |
| Bst2UI | CCWGG | 5 cut(s) | 284, 821, 1096, 1387, 1419 |
| Bst4CI | ACNGT | 6 cut(s) | 235, 465, 833, 838, 1370, 1400 |
| Bst6I | CTCTTC | 4 cut(s) | 83, 89, 169, 1165 |
| BstBAI | YACGTR | 1 cut(s) | 478 |
| BstC8I | GCNNGC | 2 cut(s) | 743, 1102 |
| BstDEI | CTNAG | 2 cut(s) | 582, 1068 |
| BstF5I | GGATG | 3 cut(s) | 1282, 1354, 1354 |
| BstKTI | GATC | 5 cut(s) | 337, 367, 622, 925, 1143 |
| BstMAI | GTCTC | 1 cut(s) | 570 |
| BstMBI | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 56, 508, 1350 |
| BstNI | CCWGG | 5 cut(s) | 284, 821, 1096, 1387, 1419 |
| BstSCI | CCNGG | 6 cut(s) | 282, 520, 819, 1094, 1385, 1417 |
| BstSFI | CTRYAG | 2 cut(s) | 231, 1399 |
| BstSLI | GKGCMC | 1 cut(s) | 1087 |
| BstV2I | GAAGAC | 4 cut(s) | 91, 393, 1097, 1401 |
| BstX2I | RGATCY | 1 cut(s) | 334 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 422, 566 |
| BstYI | RGATCY | 1 cut(s) | 334 |
| BsuRI | GGCC | 6 cut(s) | 777, 984, 1073, 1085, 1238, 1353 |
| BtgZI | GCGATG | 2 cut(s) | 40, 327 |
| BtsCI | GGATG | 3 cut(s) | 1282, 1354, 1354 |
| BtsI | GCAGTG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 3 cut(s) | 12, 985, 1311 |
| Cac8I | GCNNGC | 2 cut(s) | 743, 1102 |
| Cfr13I | GGNCC | 4 cut(s) | 287, 1083, 1084, 1236 |
| Csp6I | GTAC | 3 cut(s) | 475, 834, 1156 |
| CviAII | CATG | 5 cut(s) | 528, 694, 998, 1203, 1434 |
| CviQI | GTAC | 3 cut(s) | 475, 834, 1156 |
| DdeI | CTNAG | 2 cut(s) | 582, 1068 |
| DpnI | GATC | 5 cut(s) | 336, 366, 621, 924, 1142 |
| DpnII | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| DraI | TTTAAA | 1 cut(s) | 1260 |
| DraIII | CACNNNGTG | 1 cut(s) | 302 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 968 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 968 |
| EaeI | YGGCCR | 3 cut(s) | 775, 982, 1351 |
| Eam1104I | CTCTTC | 4 cut(s) | 83, 89, 169, 1165 |
| EarI | CTCTTC | 4 cut(s) | 83, 89, 169, 1165 |
| Ecl136II | GAGCTC | 1 cut(s) | 1444 |
| Eco130I | CCWWGG | 1 cut(s) | 626 |
| Eco147I | AGGCCT | 1 cut(s) | 1073 |
| Eco24I | GRGCYC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| Eco47I | GGWCC | 1 cut(s) | 287 |
| Eco53kI | GAGCTC | 1 cut(s) | 1444 |
| Eco57I | CTGAAG | 2 cut(s) | 419, 1109 |
| EcoICRI | GAGCTC | 1 cut(s) | 1444 |
| EcoO109I | RGGNCCY | 2 cut(s) | 287, 1084 |
| EcoRII | CCWGG | 5 cut(s) | 282, 819, 1094, 1385, 1417 |
| EcoT14I | CCWWGG | 1 cut(s) | 626 |
| EcoT22I | ATGCAT | 1 cut(s) | 1435 |
| EcoT38I | GRGCYC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| ErhI | CCWWGG | 1 cut(s) | 626 |
| FaeI | CATG | 5 cut(s) | 531, 697, 1001, 1206, 1437 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 131, 163 |
| FaqI | GGGAC | 3 cut(s) | 196, 300, 1409 |
| FatI | CATG | 5 cut(s) | 527, 693, 997, 1202, 1433 |
| FauI | CCCGC | 1 cut(s) | 516 |
| FblI | GTMKAC | 1 cut(s) | 237 |
| FokI | GGATG | 3 cut(s) | 1289, 1341, 1361 |
| FriOI | GRGCYC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| FspBI | CTAG | 1 cut(s) | 1101 |
| GsaI | CCCAGC | 1 cut(s) | 1108 |
| GsuI | CTGGAG | 1 cut(s) | 1440 |
| HaeIII | GGCC | 6 cut(s) | 777, 984, 1073, 1085, 1238, 1353 |
| HapII | CCGG | 2 cut(s) | 521, 700 |
| Hin1II | CATG | 5 cut(s) | 531, 697, 1001, 1206, 1437 |
| HincII | GTYRAC | 1 cut(s) | 1332 |
| HindII | GTYRAC | 1 cut(s) | 1332 |
| HindIII | AAGCTT | 1 cut(s) | 546 |
| HinfI | GANTC | 8 cut(s) | 404, 578, 689, 713, 876, 1123, 1190, 1422 |
| HpaI | GTTAAC | 1 cut(s) | 1332 |
| HpaII | CCGG | 2 cut(s) | 521, 700 |
| HphI | GGTGA | 8 cut(s) | 64, 79, 94, 437, 458, 467, 502, 664 |
| Hpy166II | GTNNAC | 3 cut(s) | 238, 296, 1332 |
| Hpy188I | TCNGA | 5 cut(s) | 583, 734, 1069, 1175, 1374 |
| Hpy188III | TCNNGA | 3 cut(s) | 297, 338, 368 |
| Hpy8I | GTNNAC | 3 cut(s) | 238, 296, 1332 |
| HpyCH4III | ACNGT | 6 cut(s) | 235, 465, 833, 838, 1370, 1400 |
| HpyCH4IV | ACGT | 2 cut(s) | 477, 946 |
| HpyCH4V | TGCA | 8 cut(s) | 227, 272, 325, 355, 638, 745, 1206, 1433 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 56, 508, 1350 |
| HpyF3I | CTNAG | 2 cut(s) | 582, 1068 |
| HpySE526I | ACGT | 2 cut(s) | 477, 946 |
| Hsp92II | CATG | 5 cut(s) | 531, 697, 1001, 1206, 1437 |
| KflI | GGGWCCC | 1 cut(s) | 287 |
| KspAI | GTTAAC | 1 cut(s) | 1332 |
| Kzo9I | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| LmnI | GCTCC | 1 cut(s) | 261 |
| LweI | GCATC | 2 cut(s) | 666, 1420 |
| MaeI | CTAG | 1 cut(s) | 1101 |
| MaeII | ACGT | 2 cut(s) | 477, 946 |
| MaeIII | GTNAC | 3 cut(s) | 44, 852, 1321 |
| MalI | GATC | 5 cut(s) | 336, 366, 621, 924, 1142 |
| MboI | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| MflI | RGATCY | 1 cut(s) | 334 |
| MhlI | GDGCHC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| MlsI | TGGCCA | 3 cut(s) | 777, 984, 1353 |
| MluCI | AATT | 6 cut(s) | 22, 193, 815, 927, 1055, 1336 |
| MluNI | TGGCCA | 3 cut(s) | 777, 984, 1353 |
| MlyI | GAGTC | 5 cut(s) | 398, 572, 722, 885, 1431 |
| MmeI | TCCRAC | 2 cut(s) | 929, 932 |
| Mox20I | TGGCCA | 3 cut(s) | 777, 984, 1353 |
| Mph1103I | ATGCAT | 1 cut(s) | 1435 |
| MscI | TGGCCA | 3 cut(s) | 777, 984, 1353 |
| MseI | TTAA | 5 cut(s) | 633, 975, 1116, 1259, 1331 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1410 |
| Msp20I | TGGCCA | 3 cut(s) | 777, 984, 1353 |
| MspI | CCGG | 2 cut(s) | 521, 700 |
| MspR9I | CCNGG | 6 cut(s) | 284, 522, 821, 1096, 1387, 1419 |
| Mva1269I | GAATGC | 1 cut(s) | 943 |
| MvaI | CCWGG | 5 cut(s) | 284, 821, 1096, 1387, 1419 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 56, 508, 1350 |
| NciI | CCSGG | 1 cut(s) | 522 |
| NdeII | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| NheI | GCTAGC | 1 cut(s) | 1100 |
| NlaIII | CATG | 5 cut(s) | 531, 697, 1001, 1206, 1437 |
| NlaIV | GGNNCC | 6 cut(s) | 288, 289, 704, 1085, 1237, 1302 |
| NmuCI | GTSAC | 2 cut(s) | 852, 1321 |
| NsiI | ATGCAT | 1 cut(s) | 1435 |
| PasI | CCCWGGG | 1 cut(s) | 283 |
| PceI | AGGCCT | 1 cut(s) | 1073 |
| PctI | GAATGC | 1 cut(s) | 943 |
| PfeI | GAWTC | 3 cut(s) | 689, 1123, 1190 |
| PfoI | TCCNGGA | 2 cut(s) | 819, 1417 |
| PleI | GAGTC | 5 cut(s) | 398, 572, 721, 884, 1430 |
| PpsI | GAGTC | 5 cut(s) | 398, 572, 721, 884, 1430 |
| Ppu21I | YACGTR | 1 cut(s) | 478 |
| PpuMI | RGGWCCY | 1 cut(s) | 287 |
| Psp124BI | GAGCTC | 1 cut(s) | 1446 |
| Psp1406I | AACGTT | 1 cut(s) | 946 |
| Psp5II | RGGWCCY | 1 cut(s) | 287 |
| Psp6I | CCWGG | 5 cut(s) | 282, 819, 1094, 1385, 1417 |
| PspFI | CCCAGC | 1 cut(s) | 1104 |
| PspGI | CCWGG | 5 cut(s) | 282, 819, 1094, 1385, 1417 |
| PspN4I | GGNNCC | 6 cut(s) | 288, 289, 704, 1085, 1237, 1302 |
| PspOMI | GGGCCC | 1 cut(s) | 1083 |
| PspPI | GGNCC | 4 cut(s) | 287, 1083, 1084, 1236 |
| PspPPI | RGGWCCY | 1 cut(s) | 287 |
| PsuI | RGATCY | 1 cut(s) | 334 |
| RsaI | GTAC | 3 cut(s) | 476, 835, 1157 |
| RsaNI | GTAC | 3 cut(s) | 475, 834, 1156 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1410 |
| SacI | GAGCTC | 1 cut(s) | 1446 |
| SaqAI | TTAA | 5 cut(s) | 633, 975, 1116, 1259, 1331 |
| Sau3AI | GATC | 5 cut(s) | 334, 364, 619, 922, 1140 |
| Sau96I | GGNCC | 4 cut(s) | 287, 1083, 1084, 1236 |
| SchI | GAGTC | 5 cut(s) | 398, 572, 722, 885, 1431 |
| ScrFI | CCNGG | 6 cut(s) | 284, 522, 821, 1096, 1387, 1419 |
| SduI | GDGCHC | 5 cut(s) | 115, 123, 997, 1087, 1446 |
| SfaNI | GCATC | 2 cut(s) | 666, 1420 |
| SfcI | CTRYAG | 2 cut(s) | 231, 1399 |
| SinI | GGWCC | 1 cut(s) | 287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1410 |
| SmlI | CTYRAG | 1 cut(s) | 116 |
| SmoI | CTYRAG | 1 cut(s) | 116 |
| Sse9I | AATT | 6 cut(s) | 22, 193, 815, 927, 1055, 1336 |
| SseBI | AGGCCT | 1 cut(s) | 1073 |
| SsiI | CCGC | 4 cut(s) | 509, 598, 880, 1342 |
| SspI | AATATT | 1 cut(s) | 720 |
| SspMI | CTAG | 1 cut(s) | 1101 |
| SstI | GAGCTC | 1 cut(s) | 1446 |
| StuI | AGGCCT | 1 cut(s) | 1073 |
| StyD4I | CCNGG | 6 cut(s) | 282, 520, 819, 1094, 1385, 1417 |
| StyI | CCWWGG | 1 cut(s) | 626 |
| TaaI | ACNGT | 6 cut(s) | 235, 465, 833, 838, 1370, 1400 |
| TaiI | ACGT | 2 cut(s) | 480, 949 |
| TasI | AATT | 6 cut(s) | 22, 193, 815, 927, 1055, 1336 |
| TfiI | GAWTC | 3 cut(s) | 689, 1123, 1190 |
| Tru1I | TTAA | 5 cut(s) | 633, 975, 1116, 1259, 1331 |
| Tru9I | TTAA | 5 cut(s) | 633, 975, 1116, 1259, 1331 |
| TscAI | CASTG | 3 cut(s) | 12, 992, 1311 |
| TseFI | GTSAC | 2 cut(s) | 852, 1321 |
| Tsp45I | GTSAC | 2 cut(s) | 852, 1321 |
| TspRI | CASTG | 3 cut(s) | 12, 992, 1311 |
| VpaK11BI | GGWCC | 1 cut(s) | 287 |
| XapI | RAATTY | 1 cut(s) | 815 |
| XmiI | GTMKAC | 1 cut(s) | 237 |
| XspI | CTAG | 1 cut(s) | 1101 |
| Zsp2I | ATGCAT | 1 cut(s) | 1435 |