Protein trichome birefringence-like 5
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20590 AT5G20590 |
| fragaria_vesca | FvH4_4g06600 |
| malus_domestica | MD16G1241800.v1.1 |
| prunus_persica | Prupe.1G068600_v2.0.a1 Prupe.1G068600_v2.0.a1 |
| pyrus_communis | pycom16g20260 |
| rosa_chinensis | RchiOBHm_Chr4g0398501 RchiOBHm_Chr4g0398521 |
| rosa_laevigata | RLG00000009351 RLG00000009358 |
| rosa_multiflora | Rmu_sc0007985.1_g000006 Rmu_ssc0000240.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00343470 Rroxscaffold_5G00343480 |
| rosa_rugosa | Rorug04G0008800 |
| rosa_samantha | Rh4AG086900 Rh4BG083500 Rh4CG094900 Rh4CG095000 Rh4DG078300 |
| rosa_wichuraiana | Rw4G007240 Rw4G007250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1120 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 962 |
| Acc36I | ACCTGC | 1 cut(s) | 1120 |
| AciI | CCGC | 7 cut(s) | 27, 81, 503, 592, 874, 1336, 1597 |
| AclI | AACGTT | 1 cut(s) | 940 |
| AclWI | GGATC | 1 cut(s) | 924 |
| AcoI | YGGCCR | 4 cut(s) | 177, 769, 976, 1345 |
| AcsI | RAATTY | 3 cut(s) | 453, 809, 1543 |
| AcuI | CTGAAG | 2 cut(s) | 413, 1103 |
| AfaI | GTAC | 5 cut(s) | 470, 500, 829, 1151, 1483 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 693, 985, 1074, 1227 |
| AgsI | TTSAA | 3 cut(s) | 808, 1312, 1521 |
| AjiI | CACGTC | 1 cut(s) | 1539 |
| AjnI | CCWGG | 4 cut(s) | 813, 1088, 1379, 1411 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 349, 381 |
| AleI | CACNNNNGTG | 1 cut(s) | 1404 |
| Alw21I | GWGCWC | 3 cut(s) | 289, 386, 1440 |
| Alw26I | GTCTC | 1 cut(s) | 564 |
| AlwI | GGATC | 1 cut(s) | 924 |
| Ama87I | CYCGRG | 1 cut(s) | 113 |
| AoxI | GGCC | 7 cut(s) | 177, 769, 976, 1065, 1077, 1230, 1345 |
| ApaI | GGGCCC | 1 cut(s) | 1081 |
| ApeKI | GCWGC | 5 cut(s) | 72, 75, 78, 121, 1533 |
| ApoI | RAATTY | 3 cut(s) | 453, 809, 1543 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 6 cut(s) | 316, 763, 1077, 1078, 1230, 1589 |
| AsuC2I | CCSGG | 1 cut(s) | 516 |
| AsuNHI | GCTAGC | 2 cut(s) | 61, 1094 |
| AvaI | CYCGRG | 1 cut(s) | 113 |
| AvaII | GGWCC | 3 cut(s) | 316, 763, 1589 |
| BaeGI | GKGCMC | 1 cut(s) | 1081 |
| BalI | TGGCCA | 3 cut(s) | 771, 978, 1347 |
| BanII | GRGCYC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| BauI | CACGAG | 1 cut(s) | 1005 |
| BbsI | GAAGAC | 3 cut(s) | 265, 1091, 1395 |
| Bbv12I | GWGCWC | 3 cut(s) | 289, 386, 1440 |
| BbvI | GCAGC | 5 cut(s) | 59, 65, 87, 133, 1545 |
| BccI | CCATC | 6 cut(s) | 257, 431, 1337, 1356, 1360, 1502 |
| BceAI | ACGGC | 4 cut(s) | 164, 201, 622, 1514 |
| BciT130I | CCWGG | 4 cut(s) | 815, 1090, 1381, 1413 |
| BclI | TGATCA | 1 cut(s) | 535 |
| BcnI | CCSGG | 1 cut(s) | 516 |
| BcoDI | GTCTC | 1 cut(s) | 564 |
| BfaI | CTAG | 3 cut(s) | 62, 1095, 1602 |
| BfmI | CTRYAG | 3 cut(s) | 73, 141, 1393 |
| BfuAI | ACCTGC | 1 cut(s) | 1120 |
| BisI | GCNGC | 5 cut(s) | 73, 76, 79, 122, 1534 |
| BlsI | GCNGC | 5 cut(s) | 74, 77, 80, 123, 1535 |
| Bme1390I | CCNGG | 5 cut(s) | 516, 815, 1090, 1381, 1413 |
| Bme18I | GGWCC | 3 cut(s) | 316, 763, 1589 |
| BmeT110I | CYCGRG | 1 cut(s) | 113 |
| BmgBI | CACGTC | 1 cut(s) | 1539 |
| BmgT120I | GGNCC | 6 cut(s) | 316, 763, 1077, 1078, 1230, 1589 |
| BmiI | GGNNCC | 5 cut(s) | 698, 1079, 1231, 1296, 1490 |
| BmrFI | CCNGG | 5 cut(s) | 516, 815, 1090, 1381, 1413 |
| BmrI | ACTGGG | 1 cut(s) | 186 |
| BmsI | GCATC | 4 cut(s) | 88, 660, 1261, 1414 |
| BmtI | GCTAGC | 2 cut(s) | 65, 1098 |
| BmuI | ACTGGG | 1 cut(s) | 186 |
| BpiI | GAAGAC | 3 cut(s) | 265, 1091, 1395 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1023, 1055 |
| BpmI | CTGGAG | 1 cut(s) | 1434 |
| BpuEI | CTTGAG | 1 cut(s) | 1124 |
| BpuMI | CCSGG | 1 cut(s) | 516 |
| BsaAI | YACGTR | 1 cut(s) | 472 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1347, 1512 |
| BsaJI | CCNNGG | 5 cut(s) | 180, 620, 766, 1089, 1592 |
| BsaWI | WCCGGW | 1 cut(s) | 693 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 827, 857 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 693, 985, 1074, 1227 |
| Bse1I | ACTGG | 7 cut(s) | 192, 700, 979, 986, 1242, 1298, 1406 |
| Bse3DI | GCAATG | 2 cut(s) | 565, 1207 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1347, 1512 |
| BseBI | CCWGG | 4 cut(s) | 815, 1090, 1381, 1413 |
| BseDI | CCNNGG | 5 cut(s) | 180, 620, 766, 1089, 1592 |
| BseGI | GGATG | 5 cut(s) | 36, 1276, 1348, 1348, 1588 |
| BseJI | GATNNNNATC | 2 cut(s) | 1347, 1512 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 693, 985, 1074, 1227 |
| BseMI | GCAATG | 2 cut(s) | 565, 1207 |
| BseMII | CTCAG | 3 cut(s) | 369, 567, 1053 |
| BseNI | ACTGG | 7 cut(s) | 192, 700, 979, 986, 1242, 1298, 1406 |
| BseRI | GAGGAG | 3 cut(s) | 580, 713, 1574 |
| BseSI | GKGCMC | 1 cut(s) | 1081 |
| BseXI | GCAGC | 5 cut(s) | 59, 65, 87, 133, 1545 |
| BsgI | GTGCAG | 1 cut(s) | 106 |
| BshFI | GGCC | 7 cut(s) | 179, 771, 978, 1067, 1079, 1232, 1347 |
| BsiHKAI | GWGCWC | 3 cut(s) | 289, 386, 1440 |
| BsiHKCI | CYCGRG | 1 cut(s) | 113 |
| BsiSI | CCGG | 2 cut(s) | 515, 694 |
| BslFI | GGGAC | 1 cut(s) | 1403 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 693, 985, 1074, 1227 |
| BsmAI | GTCTC | 1 cut(s) | 564 |
| BsmFI | GGGAC | 1 cut(s) | 1403 |
| BsmI | GAATGC | 1 cut(s) | 937 |
| BsnI | GGCC | 7 cut(s) | 179, 771, 978, 1067, 1079, 1232, 1347 |
| BsoBI | CYCGRG | 1 cut(s) | 113 |
| Bsp120I | GGGCCC | 1 cut(s) | 1077 |
| Bsp1286I | GDGCHC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| Bsp1407I | TGTACA | 1 cut(s) | 827 |
| Bsp143I | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| Bsp19I | CCATGG | 1 cut(s) | 766 |
| BspACI | CCGC | 7 cut(s) | 27, 81, 503, 592, 874, 1336, 1597 |
| BspANI | GGCC | 7 cut(s) | 179, 771, 978, 1067, 1079, 1232, 1347 |
| BspCNI | CTCAG | 3 cut(s) | 370, 568, 1054 |
| BspLI | GGNNCC | 5 cut(s) | 698, 1079, 1231, 1296, 1490 |
| BspMAI | CTGCAG | 2 cut(s) | 77, 145 |
| BspMI | ACCTGC | 1 cut(s) | 1120 |
| BspOI | GCTAGC | 2 cut(s) | 65, 1098 |
| BspPI | GGATC | 1 cut(s) | 924 |
| BsrDI | GCAATG | 2 cut(s) | 565, 1207 |
| BsrGI | TGTACA | 1 cut(s) | 827 |
| BsrI | ACTGG | 7 cut(s) | 192, 700, 979, 986, 1242, 1298, 1406 |
| BssECI | CCNNGG | 5 cut(s) | 180, 620, 766, 1089, 1592 |
| BssMI | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| BssSI | CACGAG | 1 cut(s) | 1005 |
| BssT1I | CCWWGG | 2 cut(s) | 620, 766 |
| Bst2BI | CACGAG | 1 cut(s) | 1005 |
| Bst2UI | CCWGG | 4 cut(s) | 815, 1090, 1381, 1413 |
| Bst4CI | ACNGT | 4 cut(s) | 827, 832, 1364, 1394 |
| Bst6I | CTCTTC | 1 cut(s) | 263 |
| BstAUI | TGTACA | 1 cut(s) | 827 |
| BstBAI | YACGTR | 1 cut(s) | 472 |
| BstC8I | GCNNGC | 8 cut(s) | 6, 43, 47, 63, 126, 737, 1096, 1100 |
| BstDEI | CTNAG | 3 cut(s) | 378, 576, 1062 |
| BstDSI | CCRYGG | 2 cut(s) | 180, 766 |
| BstF5I | GGATG | 5 cut(s) | 36, 1276, 1348, 1348, 1588 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 4 cut(s) | 538, 616, 919, 1137 |
| BstMAI | GTCTC | 1 cut(s) | 564 |
| BstMBI | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 33, 42, 78, 84, 93, 149, 230, 502, 1344 |
| BstNI | CCWGG | 4 cut(s) | 815, 1090, 1381, 1413 |
| BstSCI | CCNGG | 5 cut(s) | 514, 813, 1088, 1379, 1411 |
| BstSFI | CTRYAG | 3 cut(s) | 73, 141, 1393 |
| BstSLI | GKGCMC | 1 cut(s) | 1081 |
| BstV1I | GCAGC | 5 cut(s) | 59, 65, 87, 133, 1545 |
| BstV2I | GAAGAC | 3 cut(s) | 265, 1091, 1395 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 416, 560 |
| BsuRI | GGCC | 7 cut(s) | 179, 771, 978, 1067, 1079, 1232, 1347 |
| BtgI | CCRYGG | 2 cut(s) | 180, 766 |
| BtgZI | GCGATG | 2 cut(s) | 111, 214 |
| BtrI | CACGTC | 1 cut(s) | 1539 |
| BtsCI | GGATG | 5 cut(s) | 36, 1276, 1348, 1348, 1588 |
| BtsIMutI | CAGTG | 4 cut(s) | 837, 979, 1305, 1399 |
| BveI | ACCTGC | 1 cut(s) | 1120 |
| Cac8I | GCNNGC | 8 cut(s) | 6, 43, 47, 63, 126, 737, 1096, 1100 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 6 cut(s) | 316, 763, 1077, 1078, 1230, 1589 |
| Csp6I | GTAC | 5 cut(s) | 469, 499, 828, 1150, 1482 |
| CviAII | CATG | 7 cut(s) | 522, 688, 767, 992, 1197, 1428, 1485 |
| CviQI | GTAC | 5 cut(s) | 469, 499, 828, 1150, 1482 |
| DdeI | CTNAG | 3 cut(s) | 378, 576, 1062 |
| DpnI | GATC | 4 cut(s) | 537, 615, 918, 1136 |
| DpnII | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| DraI | TTTAAA | 1 cut(s) | 1254 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 962 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 962 |
| EaeI | YGGCCR | 4 cut(s) | 177, 769, 976, 1345 |
| Eam1104I | CTCTTC | 1 cut(s) | 263 |
| EarI | CTCTTC | 1 cut(s) | 263 |
| Ecl136II | GAGCTC | 3 cut(s) | 287, 384, 1438 |
| Eco130I | CCWWGG | 2 cut(s) | 620, 766 |
| Eco147I | AGGCCT | 1 cut(s) | 1067 |
| Eco24I | GRGCYC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| Eco47I | GGWCC | 3 cut(s) | 316, 763, 1589 |
| Eco53kI | GAGCTC | 3 cut(s) | 287, 384, 1438 |
| Eco57I | CTGAAG | 2 cut(s) | 413, 1103 |
| Eco88I | CYCGRG | 1 cut(s) | 113 |
| EcoICRI | GAGCTC | 3 cut(s) | 287, 384, 1438 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1078 |
| EcoRII | CCWGG | 4 cut(s) | 813, 1088, 1379, 1411 |
| EcoT14I | CCWWGG | 2 cut(s) | 620, 766 |
| EcoT22I | ATGCAT | 1 cut(s) | 1429 |
| EcoT38I | GRGCYC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| ErhI | CCWWGG | 2 cut(s) | 620, 766 |
| FaeI | CATG | 7 cut(s) | 525, 691, 770, 995, 1200, 1431, 1488 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 305, 337 |
| FaqI | GGGAC | 1 cut(s) | 1403 |
| FatI | CATG | 7 cut(s) | 521, 687, 766, 991, 1196, 1427, 1484 |
| FauI | CCCGC | 3 cut(s) | 20, 74, 510 |
| FbaI | TGATCA | 1 cut(s) | 535 |
| Fnu4HI | GCNGC | 5 cut(s) | 73, 76, 79, 122, 1534 |
| FokI | GGATG | 5 cut(s) | 43, 1283, 1335, 1355, 1595 |
| FriOI | GRGCYC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| Fsp4HI | GCNGC | 5 cut(s) | 73, 76, 79, 122, 1534 |
| FspBI | CTAG | 3 cut(s) | 62, 1095, 1602 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 5 cut(s) | 73, 76, 79, 122, 1534 |
| GsuI | CTGGAG | 1 cut(s) | 1434 |
| HaeIII | GGCC | 7 cut(s) | 179, 771, 978, 1067, 1079, 1232, 1347 |
| HapII | CCGG | 2 cut(s) | 515, 694 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1II | CATG | 7 cut(s) | 525, 691, 770, 995, 1200, 1431, 1488 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HincII | GTYRAC | 1 cut(s) | 1326 |
| HindII | GTYRAC | 1 cut(s) | 1326 |
| HindIII | AAGCTT | 1 cut(s) | 540 |
| HinfI | GANTC | 8 cut(s) | 398, 572, 683, 707, 870, 1117, 1184, 1416 |
| HpaI | GTTAAC | 1 cut(s) | 1326 |
| HpaII | CCGG | 2 cut(s) | 515, 694 |
| Hpy166II | GTNNAC | 2 cut(s) | 132, 1326 |
| Hpy188I | TCNGA | 7 cut(s) | 379, 388, 577, 728, 1063, 1169, 1368 |
| Hpy8I | GTNNAC | 2 cut(s) | 132, 1326 |
| HpyCH4III | ACNGT | 4 cut(s) | 827, 832, 1364, 1394 |
| HpyCH4IV | ACGT | 3 cut(s) | 471, 940, 1538 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 33, 42, 78, 84, 93, 149, 230, 502, 1344 |
| HpyF3I | CTNAG | 3 cut(s) | 378, 576, 1062 |
| HpySE526I | ACGT | 3 cut(s) | 471, 940, 1538 |
| Hsp92II | CATG | 7 cut(s) | 525, 691, 770, 995, 1200, 1431, 1488 |
| HspAI | GCGC | 1 cut(s) | 106 |
| Ksp22I | TGATCA | 1 cut(s) | 535 |
| KspAI | GTTAAC | 1 cut(s) | 1326 |
| Kzo9I | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| LmnI | GCTCC | 2 cut(s) | 118, 1488 |
| Lsp1109I | GCAGC | 5 cut(s) | 59, 65, 87, 133, 1545 |
| LweI | GCATC | 4 cut(s) | 88, 660, 1261, 1414 |
| MaeI | CTAG | 3 cut(s) | 62, 1095, 1602 |
| MaeII | ACGT | 3 cut(s) | 471, 940, 1538 |
| MaeIII | GTNAC | 3 cut(s) | 218, 846, 1315 |
| MalI | GATC | 4 cut(s) | 537, 615, 918, 1136 |
| MboI | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| MfeI | CAATTG | 1 cut(s) | 166 |
| MhlI | GDGCHC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| MlsI | TGGCCA | 3 cut(s) | 771, 978, 1347 |
| MluNI | TGGCCA | 3 cut(s) | 771, 978, 1347 |
| MlyI | GAGTC | 5 cut(s) | 392, 566, 716, 879, 1425 |
| MmeI | TCCRAC | 3 cut(s) | 380, 923, 926 |
| Mox20I | TGGCCA | 3 cut(s) | 771, 978, 1347 |
| Mph1103I | ATGCAT | 1 cut(s) | 1429 |
| MscI | TGGCCA | 3 cut(s) | 771, 978, 1347 |
| MseI | TTAA | 6 cut(s) | 627, 969, 1110, 1253, 1325, 1616 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1404 |
| Msp20I | TGGCCA | 3 cut(s) | 771, 978, 1347 |
| MspA1I | CMGCKG | 1 cut(s) | 78 |
| MspI | CCGG | 2 cut(s) | 515, 694 |
| MspR9I | CCNGG | 5 cut(s) | 516, 815, 1090, 1381, 1413 |
| MunI | CAATTG | 1 cut(s) | 166 |
| Mva1269I | GAATGC | 1 cut(s) | 937 |
| MvaI | CCWGG | 4 cut(s) | 815, 1090, 1381, 1413 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 33, 42, 78, 84, 93, 149, 230, 502, 1344 |
| NciI | CCSGG | 1 cut(s) | 516 |
| NcoI | CCATGG | 1 cut(s) | 766 |
| NdeII | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| NheI | GCTAGC | 2 cut(s) | 61, 1094 |
| NlaIII | CATG | 7 cut(s) | 525, 691, 770, 995, 1200, 1431, 1488 |
| NlaIV | GGNNCC | 5 cut(s) | 698, 1079, 1231, 1296, 1490 |
| NmeAIII | GCCGAG | 1 cut(s) | 1573 |
| NmuCI | GTSAC | 2 cut(s) | 846, 1315 |
| NsiI | ATGCAT | 1 cut(s) | 1429 |
| OliI | CACNNNNGTG | 1 cut(s) | 1404 |
| PaqCI | CACCTGC | 1 cut(s) | 1120 |
| PceI | AGGCCT | 1 cut(s) | 1067 |
| PctI | GAATGC | 1 cut(s) | 937 |
| PfeI | GAWTC | 3 cut(s) | 683, 1117, 1184 |
| PfoI | TCCNGGA | 2 cut(s) | 813, 1411 |
| PkrI | GCNGC | 5 cut(s) | 74, 77, 80, 123, 1535 |
| PleI | GAGTC | 5 cut(s) | 392, 566, 715, 878, 1424 |
| PpsI | GAGTC | 5 cut(s) | 392, 566, 715, 878, 1424 |
| Ppu21I | YACGTR | 1 cut(s) | 472 |
| Psp124BI | GAGCTC | 3 cut(s) | 289, 386, 1440 |
| Psp1406I | AACGTT | 1 cut(s) | 940 |
| Psp6I | CCWGG | 4 cut(s) | 813, 1088, 1379, 1411 |
| PspGI | CCWGG | 4 cut(s) | 813, 1088, 1379, 1411 |
| PspN4I | GGNNCC | 5 cut(s) | 698, 1079, 1231, 1296, 1490 |
| PspOMI | GGGCCC | 1 cut(s) | 1077 |
| PspPI | GGNCC | 6 cut(s) | 316, 763, 1077, 1078, 1230, 1589 |
| PstI | CTGCAG | 2 cut(s) | 77, 145 |
| PvuII | CAGCTG | 1 cut(s) | 78 |
| RsaI | GTAC | 5 cut(s) | 470, 500, 829, 1151, 1483 |
| RsaNI | GTAC | 5 cut(s) | 469, 499, 828, 1150, 1482 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1404 |
| SacI | GAGCTC | 3 cut(s) | 289, 386, 1440 |
| SaqAI | TTAA | 6 cut(s) | 627, 969, 1110, 1253, 1325, 1616 |
| SatI | GCNGC | 5 cut(s) | 73, 76, 79, 122, 1534 |
| Sau3AI | GATC | 4 cut(s) | 535, 613, 916, 1134 |
| Sau96I | GGNCC | 6 cut(s) | 316, 763, 1077, 1078, 1230, 1589 |
| SchI | GAGTC | 5 cut(s) | 392, 566, 716, 879, 1425 |
| ScrFI | CCNGG | 5 cut(s) | 516, 815, 1090, 1381, 1413 |
| SduI | GDGCHC | 6 cut(s) | 140, 289, 386, 991, 1081, 1440 |
| SfaNI | GCATC | 4 cut(s) | 88, 660, 1261, 1414 |
| SfcI | CTRYAG | 3 cut(s) | 73, 141, 1393 |
| SinI | GGWCC | 3 cut(s) | 316, 763, 1589 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1404 |
| SmlI | CTYRAG | 1 cut(s) | 1103 |
| SmoI | CTYRAG | 1 cut(s) | 1103 |
| SseBI | AGGCCT | 1 cut(s) | 1067 |
| SsiI | CCGC | 7 cut(s) | 27, 81, 503, 592, 874, 1336, 1597 |
| SspI | AATATT | 1 cut(s) | 714 |
| SspMI | CTAG | 3 cut(s) | 62, 1095, 1602 |
| SstI | GAGCTC | 3 cut(s) | 289, 386, 1440 |
| StuI | AGGCCT | 1 cut(s) | 1067 |
| StyD4I | CCNGG | 5 cut(s) | 514, 813, 1088, 1379, 1411 |
| StyI | CCWWGG | 2 cut(s) | 620, 766 |
| TaaI | ACNGT | 4 cut(s) | 827, 832, 1364, 1394 |
| TaiI | ACGT | 3 cut(s) | 474, 943, 1541 |
| TatI | WGTACW | 2 cut(s) | 827, 1481 |
| TfiI | GAWTC | 3 cut(s) | 683, 1117, 1184 |
| Tru1I | TTAA | 6 cut(s) | 627, 969, 1110, 1253, 1325, 1616 |
| Tru9I | TTAA | 6 cut(s) | 627, 969, 1110, 1253, 1325, 1616 |
| TscAI | CASTG | 4 cut(s) | 837, 986, 1305, 1406 |
| TseFI | GTSAC | 2 cut(s) | 846, 1315 |
| TseI | GCWGC | 5 cut(s) | 72, 75, 78, 121, 1533 |
| Tsp45I | GTSAC | 2 cut(s) | 846, 1315 |
| TspDTI | ATGAA | 5 cut(s) | 217, 510, 704, 1274, 1304 |
| TspGWI | ACGGA | 1 cut(s) | 447 |
| TspRI | CASTG | 4 cut(s) | 837, 986, 1305, 1406 |
| VpaK11BI | GGWCC | 3 cut(s) | 316, 763, 1589 |
| XapI | RAATTY | 3 cut(s) | 453, 809, 1543 |
| XspI | CTAG | 3 cut(s) | 62, 1095, 1602 |
| Zsp2I | ATGCAT | 1 cut(s) | 1429 |