Pentatricopeptide repeat-containing protein At5g66520-like
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1188600.v1.1 MD13G1252400.v1.1 |
| prunus_persica | Prupe.1G084600_v2.0.a1 |
| pyrus_communis | pycom13g22560 |
| rosa_chinensis | RchiOBHm_Chr1g0380711 RchiOBHm_Chr3g0484681 RchiOBHm_Chr4g0401751 |
| rosa_laevigata | RLG00000009137 RLG00000023208 RLG00000026276 |
| rosa_multiflora | Rmu_sc0001637.1_g000010 Rmu_sc0014815.1_g000014 Rmu_sc0039959.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00113990 Rroxscaffold_4G00279090 Rroxscaffold_5G00345080 Rroxscaffold_5G00353300 Rroxscaffold_6G00397530 |
| rosa_rugosa | Rorug04G0031400 |
| rosa_samantha | Rh1BG403400 Rh1CG417600 Rh1DG433700 Rh3AG263400 Rh3DG292100 Rh4AG108800 Rh4BG102500 Rh4CG117100 |
| rosa_wichuraiana | Rw0G005870 Rw1G038990 Rw4G024940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 259 |
| AccII | CGCG | 1 cut(s) | 889 |
| AciI | CCGC | 2 cut(s) | 201, 887 |
| AcoI | YGGCCR | 1 cut(s) | 1249 |
| AcsI | RAATTY | 4 cut(s) | 252, 521, 1089, 1454 |
| AfaI | GTAC | 2 cut(s) | 500, 817 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1152 |
| AflIII | ACRYGT | 1 cut(s) | 1335 |
| AhlI | ACTAGT | 1 cut(s) | 575 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1305, 1337 |
| AluBI | AGCT | 9 cut(s) | 161, 187, 401, 483, 515, 713, 811, 1211, 1282 |
| AluI | AGCT | 9 cut(s) | 161, 187, 401, 483, 515, 713, 811, 1211, 1282 |
| Alw21I | GWGCWC | 2 cut(s) | 813, 1119 |
| Alw26I | GTCTC | 3 cut(s) | 230, 332, 1479 |
| AoxI | GGCC | 3 cut(s) | 154, 1143, 1249 |
| ApoI | RAATTY | 4 cut(s) | 252, 521, 1089, 1454 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 776, 808, 1495, 1527 |
| AseI | ATTAAT | 1 cut(s) | 936 |
| AspLEI | GCGC | 1 cut(s) | 362 |
| AspS9I | GGNCC | 2 cut(s) | 989, 1144 |
| AsuHPI | GGTGA | 5 cut(s) | 142, 160, 169, 230, 953 |
| AvaII | GGWCC | 1 cut(s) | 989 |
| BalI | TGGCCA | 1 cut(s) | 1251 |
| BanI | GGYRCC | 1 cut(s) | 259 |
| BanII | GRGCYC | 1 cut(s) | 813 |
| BbsI | GAAGAC | 1 cut(s) | 262 |
| Bbv12I | GWGCWC | 2 cut(s) | 813, 1119 |
| BccI | CCATC | 1 cut(s) | 1433 |
| BceAI | ACGGC | 1 cut(s) | 834 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 660, 694, 1510, 1544 |
| BclI | TGATCA | 3 cut(s) | 288, 424, 918 |
| BcoDI | GTCTC | 3 cut(s) | 230, 332, 1479 |
| BcuI | ACTAGT | 1 cut(s) | 575 |
| BfaI | CTAG | 4 cut(s) | 158, 480, 528, 576 |
| BfmI | CTRYAG | 1 cut(s) | 1120 |
| BfoI | RGCGCY | 1 cut(s) | 363 |
| BisI | GCNGC | 1 cut(s) | 887 |
| BlsI | GCNGC | 1 cut(s) | 888 |
| Bme18I | GGWCC | 1 cut(s) | 989 |
| BmgT120I | GGNCC | 2 cut(s) | 989, 1144 |
| BmiI | GGNNCC | 3 cut(s) | 261, 990, 1200 |
| BmrI | ACTGGG | 1 cut(s) | 1366 |
| BmsI | GCATC | 2 cut(s) | 607, 873 |
| BmuI | ACTGGG | 1 cut(s) | 1366 |
| BpiI | GAAGAC | 1 cut(s) | 262 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1376 |
| BpuEI | CTTGAG | 2 cut(s) | 107, 827 |
| BsaI | GGTCTC | 1 cut(s) | 332 |
| BsaJI | CCNNGG | 1 cut(s) | 787 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1352, 1382 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1152 |
| Bse118I | RCCGGY | 2 cut(s) | 152, 1265 |
| Bse1I | ACTGG | 1 cut(s) | 1361 |
| Bse3DI | GCAATG | 3 cut(s) | 607, 678, 1098 |
| BseDI | CCNNGG | 1 cut(s) | 787 |
| BseGI | GGATG | 2 cut(s) | 787, 1369 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1152 |
| BseMI | GCAATG | 3 cut(s) | 607, 678, 1098 |
| BseMII | CTCAG | 3 cut(s) | 498, 636, 1098 |
| BseNI | ACTGG | 1 cut(s) | 1361 |
| BseYI | CCCAGC | 1 cut(s) | 1151 |
| Bsh1236I | CGCG | 1 cut(s) | 889 |
| BshFI | GGCC | 3 cut(s) | 156, 1145, 1251 |
| BshNI | GGYRCC | 1 cut(s) | 259 |
| BsiHKAI | GWGCWC | 2 cut(s) | 813, 1119 |
| BsiSI | CCGG | 3 cut(s) | 153, 257, 1266 |
| BslFI | GGGAC | 2 cut(s) | 1002, 1089 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1152 |
| BsmAI | GTCTC | 3 cut(s) | 230, 332, 1479 |
| BsmFI | GGGAC | 2 cut(s) | 1002, 1089 |
| BsmI | GAATGC | 1 cut(s) | 700 |
| BsnI | GGCC | 3 cut(s) | 156, 1145, 1251 |
| Bso31I | GGTCTC | 1 cut(s) | 332 |
| Bsp1286I | GDGCHC | 2 cut(s) | 813, 1119 |
| Bsp143I | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| Bsp19I | CCATGG | 1 cut(s) | 787 |
| BspACI | CCGC | 2 cut(s) | 201, 887 |
| BspANI | GGCC | 3 cut(s) | 156, 1145, 1251 |
| BspCNI | CTCAG | 3 cut(s) | 497, 637, 1099 |
| BspFNI | CGCG | 1 cut(s) | 889 |
| BspLI | GGNNCC | 3 cut(s) | 261, 990, 1200 |
| BspT107I | GGYRCC | 1 cut(s) | 259 |
| BspTNI | GGTCTC | 1 cut(s) | 332 |
| BsrDI | GCAATG | 3 cut(s) | 607, 678, 1098 |
| BsrFI | RCCGGY | 2 cut(s) | 152, 1265 |
| BsrI | ACTGG | 1 cut(s) | 1361 |
| BssAI | RCCGGY | 2 cut(s) | 152, 1265 |
| BssECI | CCNNGG | 1 cut(s) | 787 |
| BssMI | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| BssT1I | CCWWGG | 1 cut(s) | 787 |
| Bst4CI | ACNGT | 3 cut(s) | 218, 503, 668 |
| BstC8I | GCNNGC | 1 cut(s) | 185 |
| BstDEI | CTNAG | 7 cut(s) | 190, 484, 645, 1107, 1376, 1459, 1517 |
| BstDSI | CCRYGG | 1 cut(s) | 787 |
| BstF5I | GGATG | 2 cut(s) | 787, 1369 |
| BstFNI | CGCG | 1 cut(s) | 889 |
| BstH2I | RGCGCY | 1 cut(s) | 363 |
| BstHHI | GCGC | 1 cut(s) | 362 |
| BstKTI | GATC | 4 cut(s) | 291, 427, 921, 1138 |
| BstMAI | GTCTC | 3 cut(s) | 230, 332, 1479 |
| BstMBI | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 200 |
| BstNSI | RCATGY | 2 cut(s) | 1035, 1339 |
| BstSFI | CTRYAG | 1 cut(s) | 1120 |
| BstUI | CGCG | 1 cut(s) | 889 |
| BstV2I | GAAGAC | 1 cut(s) | 262 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 292 |
| BsuRI | GGCC | 3 cut(s) | 156, 1145, 1251 |
| BtgI | CCRYGG | 1 cut(s) | 787 |
| BtsCI | GGATG | 2 cut(s) | 787, 1369 |
| BtsI | GCAGTG | 1 cut(s) | 1026 |
| BtsIMutI | CAGTG | 2 cut(s) | 673, 1026 |
| Cac8I | GCNNGC | 1 cut(s) | 185 |
| CfoI | GCGC | 1 cut(s) | 362 |
| Cfr10I | RCCGGY | 2 cut(s) | 152, 1265 |
| Cfr13I | GGNCC | 2 cut(s) | 989, 1144 |
| CseI | GACGC | 1 cut(s) | 728 |
| Csp6I | GTAC | 2 cut(s) | 499, 816 |
| CviQI | GTAC | 2 cut(s) | 499, 816 |
| DdeI | CTNAG | 7 cut(s) | 190, 484, 645, 1107, 1376, 1459, 1517 |
| DpnI | GATC | 4 cut(s) | 290, 426, 920, 1137 |
| DpnII | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| EaeI | YGGCCR | 1 cut(s) | 1249 |
| EciI | GGCGGA | 1 cut(s) | 190 |
| Ecl136II | GAGCTC | 1 cut(s) | 811 |
| Eco130I | CCWWGG | 1 cut(s) | 787 |
| Eco24I | GRGCYC | 1 cut(s) | 813 |
| Eco31I | GGTCTC | 1 cut(s) | 332 |
| Eco47I | GGWCC | 1 cut(s) | 989 |
| Eco53kI | GAGCTC | 1 cut(s) | 811 |
| EcoICRI | GAGCTC | 1 cut(s) | 811 |
| EcoO109I | RGGNCCY | 1 cut(s) | 989 |
| EcoRI | GAATTC | 1 cut(s) | 252 |
| EcoT14I | CCWWGG | 1 cut(s) | 787 |
| EcoT22I | ATGCAT | 1 cut(s) | 113 |
| EcoT38I | GRGCYC | 1 cut(s) | 813 |
| ErhI | CCWWGG | 1 cut(s) | 787 |
| FaqI | GGGAC | 2 cut(s) | 1002, 1089 |
| FbaI | TGATCA | 3 cut(s) | 288, 424, 918 |
| Fnu4HI | GCNGC | 1 cut(s) | 887 |
| FokI | GGATG | 2 cut(s) | 794, 1376 |
| FriOI | GRGCYC | 1 cut(s) | 813 |
| Fsp4HI | GCNGC | 1 cut(s) | 887 |
| FspBI | CTAG | 4 cut(s) | 158, 480, 528, 576 |
| GlaI | GCGC | 1 cut(s) | 361 |
| GluI | GCNGC | 1 cut(s) | 887 |
| GsaI | CCCAGC | 1 cut(s) | 1155 |
| HaeII | RGCGCY | 1 cut(s) | 363 |
| HaeIII | GGCC | 3 cut(s) | 156, 1145, 1251 |
| HapII | CCGG | 3 cut(s) | 153, 257, 1266 |
| HgaI | GACGC | 1 cut(s) | 728 |
| HhaI | GCGC | 1 cut(s) | 362 |
| Hin6I | GCGC | 1 cut(s) | 360 |
| HinP1I | GCGC | 1 cut(s) | 360 |
| HincII | GTYRAC | 1 cut(s) | 1514 |
| HindII | GTYRAC | 1 cut(s) | 1514 |
| HindIII | AAGCTT | 2 cut(s) | 399, 1280 |
| HinfI | GANTC | 4 cut(s) | 238, 766, 849, 1553 |
| HpaII | CCGG | 3 cut(s) | 153, 257, 1266 |
| HphI | GGTGA | 5 cut(s) | 142, 160, 169, 230, 953 |
| Hpy166II | GTNNAC | 2 cut(s) | 499, 1514 |
| Hpy188I | TCNGA | 7 cut(s) | 211, 319, 429, 441, 693, 771, 1242 |
| Hpy188III | TCNNGA | 4 cut(s) | 301, 728, 1106, 1488 |
| Hpy8I | GTNNAC | 2 cut(s) | 499, 1514 |
| Hpy99I | CGWCG | 2 cut(s) | 744, 747 |
| HpyAV | CCTTC | 6 cut(s) | 205, 345, 749, 979, 1308, 1384 |
| HpyCH4III | ACNGT | 3 cut(s) | 218, 503, 668 |
| HpyCH4IV | ACGT | 1 cut(s) | 1078 |
| HpyCH4V | TGCA | 6 cut(s) | 111, 671, 839, 1031, 1128, 1450 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 200 |
| HpyF3I | CTNAG | 7 cut(s) | 190, 484, 645, 1107, 1376, 1459, 1517 |
| HpySE526I | ACGT | 1 cut(s) | 1078 |
| HspAI | GCGC | 1 cut(s) | 360 |
| Ksp22I | TGATCA | 3 cut(s) | 288, 424, 918 |
| Kzo9I | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| LmnI | GCTCC | 2 cut(s) | 1108, 1208 |
| LweI | GCATC | 2 cut(s) | 607, 873 |
| MaeI | CTAG | 4 cut(s) | 158, 480, 528, 576 |
| MaeII | ACGT | 1 cut(s) | 1078 |
| MaeIII | GTNAC | 4 cut(s) | 475, 623, 898, 1006 |
| MalI | GATC | 4 cut(s) | 290, 426, 920, 1137 |
| MboI | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| MboII | GAAGA | 6 cut(s) | 74, 77, 80, 83, 86, 262 |
| MhlI | GDGCHC | 2 cut(s) | 813, 1119 |
| MlsI | TGGCCA | 1 cut(s) | 1251 |
| MluCI | AATT | 8 cut(s) | 252, 280, 506, 521, 1089, 1292, 1410, 1454 |
| MluNI | TGGCCA | 1 cut(s) | 1251 |
| MlyI | GAGTC | 1 cut(s) | 232 |
| MmeI | TCCRAC | 2 cut(s) | 551, 997 |
| MnlI | CCTC | 6 cut(s) | 84, 1159, 1311, 1354, 1365, 1393 |
| Mox20I | TGGCCA | 1 cut(s) | 1251 |
| Mph1103I | ATGCAT | 1 cut(s) | 113 |
| MscI | TGGCCA | 1 cut(s) | 1251 |
| MseI | TTAA | 5 cut(s) | 396, 855, 936, 1230, 1508 |
| MslI | CAYNNNNRTG | 3 cut(s) | 106, 290, 462 |
| Msp20I | TGGCCA | 1 cut(s) | 1251 |
| MspI | CCGG | 3 cut(s) | 153, 257, 1266 |
| Mva1269I | GAATGC | 1 cut(s) | 700 |
| MvnI | CGCG | 1 cut(s) | 889 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 200 |
| NcoI | CCATGG | 1 cut(s) | 787 |
| NdeII | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| NlaIV | GGNNCC | 3 cut(s) | 261, 990, 1200 |
| NmeAIII | GCCGAG | 1 cut(s) | 259 |
| NmuCI | GTSAC | 2 cut(s) | 623, 1006 |
| NsiI | ATGCAT | 1 cut(s) | 113 |
| NspI | RCATGY | 2 cut(s) | 1035, 1339 |
| PciI | ACATGT | 1 cut(s) | 1335 |
| PctI | GAATGC | 1 cut(s) | 700 |
| PfeI | GAWTC | 3 cut(s) | 766, 849, 1553 |
| PkrI | GCNGC | 1 cut(s) | 888 |
| PleI | GAGTC | 1 cut(s) | 232 |
| PpsI | GAGTC | 1 cut(s) | 232 |
| PpuMI | RGGWCCY | 1 cut(s) | 989 |
| PscI | ACATGT | 1 cut(s) | 1335 |
| PshBI | ATTAAT | 1 cut(s) | 936 |
| Psp124BI | GAGCTC | 1 cut(s) | 813 |
| Psp5II | RGGWCCY | 1 cut(s) | 989 |
| PspFI | CCCAGC | 1 cut(s) | 1151 |
| PspN4I | GGNNCC | 3 cut(s) | 261, 990, 1200 |
| PspPI | GGNCC | 2 cut(s) | 989, 1144 |
| PspPPI | RGGWCCY | 1 cut(s) | 989 |
| RsaI | GTAC | 2 cut(s) | 500, 817 |
| RsaNI | GTAC | 2 cut(s) | 499, 816 |
| RseI | CAYNNNNRTG | 3 cut(s) | 106, 290, 462 |
| SacI | GAGCTC | 1 cut(s) | 813 |
| SaqAI | TTAA | 5 cut(s) | 396, 855, 936, 1230, 1508 |
| SatI | GCNGC | 1 cut(s) | 887 |
| Sau3AI | GATC | 4 cut(s) | 288, 424, 918, 1135 |
| Sau96I | GGNCC | 2 cut(s) | 989, 1144 |
| SchI | GAGTC | 1 cut(s) | 232 |
| SduI | GDGCHC | 2 cut(s) | 813, 1119 |
| SfaNI | GCATC | 2 cut(s) | 607, 873 |
| SfcI | CTRYAG | 1 cut(s) | 1120 |
| SinI | GGWCC | 1 cut(s) | 989 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 106, 290, 462 |
| SmlI | CTYRAG | 2 cut(s) | 122, 806 |
| SmoI | CTYRAG | 2 cut(s) | 122, 806 |
| SpeI | ACTAGT | 1 cut(s) | 575 |
| Sse9I | AATT | 8 cut(s) | 252, 280, 506, 521, 1089, 1292, 1410, 1454 |
| SsiI | CCGC | 2 cut(s) | 201, 887 |
| SspMI | CTAG | 4 cut(s) | 158, 480, 528, 576 |
| SstI | GAGCTC | 1 cut(s) | 813 |
| StyI | CCWWGG | 1 cut(s) | 787 |
| TaaI | ACNGT | 3 cut(s) | 218, 503, 668 |
| TaiI | ACGT | 1 cut(s) | 1081 |
| TaqI | TCGA | 5 cut(s) | 250, 273, 376, 633, 1530 |
| TasI | AATT | 8 cut(s) | 252, 280, 506, 521, 1089, 1292, 1410, 1454 |
| TatI | WGTACW | 1 cut(s) | 498 |
| TauI | GCSGC | 1 cut(s) | 889 |
| TfiI | GAWTC | 3 cut(s) | 766, 849, 1553 |
| Tru1I | TTAA | 5 cut(s) | 396, 855, 936, 1230, 1508 |
| Tru9I | TTAA | 5 cut(s) | 396, 855, 936, 1230, 1508 |
| TscAI | CASTG | 2 cut(s) | 673, 1033 |
| TseFI | GTSAC | 2 cut(s) | 623, 1006 |
| Tsp45I | GTSAC | 2 cut(s) | 623, 1006 |
| TspDTI | ATGAA | 9 cut(s) | 96, 128, 461, 558, 768, 841, 1071, 1403, 1417 |
| TspGWI | ACGGA | 1 cut(s) | 1221 |
| TspRI | CASTG | 2 cut(s) | 673, 1033 |
| VpaK11BI | GGWCC | 1 cut(s) | 989 |
| VspI | ATTAAT | 1 cut(s) | 936 |
| XapI | RAATTY | 4 cut(s) | 252, 521, 1089, 1454 |
| XceI | RCATGY | 2 cut(s) | 1035, 1339 |
| XspI | CTAG | 4 cut(s) | 158, 480, 528, 576 |
| Zsp2I | ATGCAT | 1 cut(s) | 113 |