Kinetochore protein NDC80 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0408691 |
| rosa_laevigata | RLG00000003120 RLG00000007481 RLG00000023669 |
| rosa_multiflora | Rmu_sc0004465.1_g000035 Rmu_sc0008178.1_g000001 Rmu_sc0011205.1_g000001 |
| rosa_samantha | Rh1BG007500 Rh1CG013300 Rh1DG008900 Rh1DG187600 Rh2AG226300 Rh2AG399500 Rh2CG229400 Rh3AG181200 Rh3BG082400 Rh3CG204700 Rh3CG275900 Rh3DG354200 Rh5BG257500 Rh5BG483900 Rh5CG147800 Rh5CG423000 Rh5CG508500 Rh6BG193200 Rh7BG133800 Rh7DG092600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 225 |
| AciI | CCGC | 3 cut(s) | 17, 46, 139 |
| AcoI | YGGCCR | 1 cut(s) | 246 |
| AcyI | GRCGYC | 1 cut(s) | 63 |
| AgsI | TTSAA | 1 cut(s) | 325 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 161 |
| AluBI | AGCT | 1 cut(s) | 352 |
| AluI | AGCT | 1 cut(s) | 352 |
| AoxI | GGCC | 2 cut(s) | 97, 246 |
| ApeKI | GCWGC | 1 cut(s) | 352 |
| AspLEI | GCGC | 1 cut(s) | 75 |
| AspS9I | GGNCC | 1 cut(s) | 98 |
| BbvI | GCAGC | 1 cut(s) | 339 |
| BccI | CCATC | 2 cut(s) | 31, 119 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BfoI | RGCGCY | 1 cut(s) | 76 |
| BfuAI | ACCTGC | 1 cut(s) | 225 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 105 |
| BisI | GCNGC | 1 cut(s) | 353 |
| BlsI | GCNGC | 1 cut(s) | 354 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 161 |
| BmgT120I | GGNCC | 1 cut(s) | 98 |
| BmiI | GGNNCC | 2 cut(s) | 100, 109 |
| BsaHI | GRCGYC | 1 cut(s) | 63 |
| BseGI | GGATG | 1 cut(s) | 373 |
| BseRI | GAGGAG | 1 cut(s) | 67 |
| BseXI | GCAGC | 1 cut(s) | 339 |
| BshFI | GGCC | 2 cut(s) | 99, 248 |
| BsiSI | CCGG | 1 cut(s) | 249 |
| BsnI | GGCC | 2 cut(s) | 99, 248 |
| BspACI | CCGC | 3 cut(s) | 17, 46, 139 |
| BspANI | GGCC | 2 cut(s) | 99, 248 |
| BspHI | TCATGA | 1 cut(s) | 343 |
| BspLI | GGNNCC | 2 cut(s) | 100, 109 |
| BspMI | ACCTGC | 1 cut(s) | 225 |
| BssNI | GRCGYC | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 3 cut(s) | 33, 291, 303 |
| BstACI | GRCGYC | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 2 cut(s) | 67, 71 |
| BstF5I | GGATG | 1 cut(s) | 373 |
| BstH2I | RGCGCY | 1 cut(s) | 76 |
| BstHHI | GCGC | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 105 |
| BstV1I | GCAGC | 1 cut(s) | 339 |
| BsuRI | GGCC | 2 cut(s) | 99, 248 |
| BtsCI | GGATG | 1 cut(s) | 373 |
| BtsIMutI | CAGTG | 1 cut(s) | 299 |
| BveI | ACCTGC | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 2 cut(s) | 67, 71 |
| CciI | TCATGA | 1 cut(s) | 343 |
| CfoI | GCGC | 1 cut(s) | 75 |
| Cfr13I | GGNCC | 1 cut(s) | 98 |
| CseI | GACGC | 1 cut(s) | 71 |
| CviAII | CATG | 1 cut(s) | 344 |
| CviJI | RGCY | 4 cut(s) | 99, 108, 248, 352 |
| CviKI_1 | RGCY | 4 cut(s) | 99, 108, 248, 352 |
| DriI | GACNNNNNGTC | 1 cut(s) | 161 |
| EaeI | YGGCCR | 1 cut(s) | 246 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 161 |
| EciI | GGCGGA | 1 cut(s) | 35 |
| FaeI | CATG | 1 cut(s) | 347 |
| FaiI | YATR | 2 cut(s) | 214, 345 |
| FatI | CATG | 1 cut(s) | 343 |
| Fnu4HI | GCNGC | 1 cut(s) | 353 |
| Fsp4HI | GCNGC | 1 cut(s) | 353 |
| GlaI | GCGC | 1 cut(s) | 74 |
| GluI | GCNGC | 1 cut(s) | 353 |
| HaeII | RGCGCY | 1 cut(s) | 76 |
| HaeIII | GGCC | 2 cut(s) | 99, 248 |
| HapII | CCGG | 1 cut(s) | 249 |
| HgaI | GACGC | 1 cut(s) | 71 |
| HhaI | GCGC | 1 cut(s) | 75 |
| Hin1I | GRCGYC | 1 cut(s) | 63 |
| Hin1II | CATG | 1 cut(s) | 347 |
| Hin6I | GCGC | 1 cut(s) | 73 |
| HinP1I | GCGC | 1 cut(s) | 73 |
| HincII | GTYRAC | 1 cut(s) | 166 |
| HindII | GTYRAC | 1 cut(s) | 166 |
| HinfI | GANTC | 2 cut(s) | 56, 87 |
| HpaII | CCGG | 1 cut(s) | 249 |
| Hpy166II | GTNNAC | 3 cut(s) | 166, 294, 306 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 3 cut(s) | 27, 273, 344 |
| Hpy8I | GTNNAC | 3 cut(s) | 166, 294, 306 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyAV | CCTTC | 3 cut(s) | 98, 331, 365 |
| HpyCH4III | ACNGT | 3 cut(s) | 33, 291, 303 |
| HpyCH4V | TGCA | 2 cut(s) | 220, 355 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 105 |
| Hsp92I | GRCGYC | 1 cut(s) | 63 |
| Hsp92II | CATG | 1 cut(s) | 347 |
| HspAI | GCGC | 1 cut(s) | 73 |
| LmnI | GCTCC | 2 cut(s) | 80, 113 |
| LpnPI | CCDG | 5 cut(s) | 55, 79, 146, 230, 262 |
| Lsp1109I | GCAGC | 1 cut(s) | 339 |
| MboII | GAAGA | 1 cut(s) | 321 |
| MluCI | AATT | 3 cut(s) | 206, 231, 284 |
| MlyI | GAGTC | 1 cut(s) | 50 |
| MmeI | TCCRAC | 1 cut(s) | 141 |
| MnlI | CCTC | 5 cut(s) | 88, 137, 168, 343, 352 |
| MspI | CCGG | 1 cut(s) | 249 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 105 |
| NlaIII | CATG | 1 cut(s) | 347 |
| NlaIV | GGNNCC | 2 cut(s) | 100, 109 |
| PagI | TCATGA | 1 cut(s) | 343 |
| PfeI | GAWTC | 1 cut(s) | 87 |
| PkrI | GCNGC | 1 cut(s) | 354 |
| PleI | GAGTC | 1 cut(s) | 50 |
| PpsI | GAGTC | 1 cut(s) | 50 |
| PspN4I | GGNNCC | 2 cut(s) | 100, 109 |
| PspPI | GGNCC | 1 cut(s) | 98 |
| SatI | GCNGC | 1 cut(s) | 353 |
| Sau96I | GGNCC | 1 cut(s) | 98 |
| SchI | GAGTC | 1 cut(s) | 50 |
| SetI | ASST | 8 cut(s) | 129, 160, 171, 219, 323, 354, 363, 376 |
| Sse9I | AATT | 3 cut(s) | 206, 231, 284 |
| SsiI | CCGC | 3 cut(s) | 17, 46, 139 |
| TaaI | ACNGT | 3 cut(s) | 33, 291, 303 |
| TaqI | TCGA | 3 cut(s) | 36, 123, 154 |
| TasI | AATT | 3 cut(s) | 206, 231, 284 |
| TfiI | GAWTC | 1 cut(s) | 87 |
| TscAI | CASTG | 1 cut(s) | 306 |
| TseI | GCWGC | 1 cut(s) | 352 |
| TspDTI | ATGAA | 2 cut(s) | 17, 360 |
| TspRI | CASTG | 1 cut(s) | 306 |