Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004755

Physical Location & Seq

Genomic Coordinates Reverse (-)

64873775 .. 64879061

Gene Structure 5287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41164

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGAAGGAGAGAGAGCCGAGAAAAAGAGGCAGCTTGATCTTGACTACGACAAACTTTTGGGCGACAATGACGATTCTGACCCGCCGGAGGTACTGAGAGTGAAGAAGCCCAAAGCCATAGCCACCACCGCGGCGGCTGCGGCGGCCGACGAGCCACCGGCGATGAGCGGCGGCGATGAGGAGCTTGAGAGGATGAACAATACCGAGCTCGAAGGAGCGATTAAGCGGCAAGTAGAAAATTTGAAGCGGATGGGCTCTATACTGCCGGACAAAGGCGAAAAGCTTCGGATTTGTCTGAAGAAACTGGAGGATGAACAGGGGAGGAGGAGGCTTGAACGCTCCGAGAGGGGCACCAGTAAGGGGGAGAAGCCTACCCGAGCGACCAGCTCTGCAGGTGTTTCTAATGGCTTCAGAGATAAGGAGGCTACATCACCCCCGACCGAGCTACAGTCTTCATTTAATAAATTCTTTTCTAAAAAGTTGGATGACAATAAAGATTGTAGCAAGGGCAATGCATTTGAAAGAGAGTTATCAACTTTGGGTCACTGCAACCGCCAGAAAAGGAACAATAATGGAGAATTCTTGCAAAAGGGGGCACAGAAAGGTCGATCTTCATCAAGACATTTCTCTTCTCAAAGCCCTAGCAACTTTTATCGTGATAAAGATAAAAGTTTTCTCTCAAATGGTGATCGTAAAGGCAGAGCTTCTTCCAATAACTCAGGTCGTCACGGTGAGGAAAACTTCTCTAGCAGCATTTCAAAAAGGGAGGAACCATATCAACTTCGGAATAGGGATAGGAATAGGAAGAGTCAGACCATTTTACTTGTGGATGAGGAGGAACCCGAGTTCATGGACACCACAGAGCAAATAGAAGAAATTCCTGAGAGCATGAAAGACTCTAGAATCTACTATCCATCAAGGGATGATCCACATTCTGTTGAAATTTGTTATACAGACACTAAGTGCCTTGATCCTCAAAGCTACTTGACATCAGCTATTATGAATTTCTACATACGGTATTTACATCAACAAGCATCCCCTACAGACAGGGGAATATGTGCGTTTCATTTCTTCAATACCTTTTTTTACAATAAGCTCAAAGATGCTGTATCAGAAAAGGGGACCAACAAGGATAACCTTTTTGTCAAGCTTAGAAGGTGGTGGAAGGGTGTTGATATATTTCAGAAGGCTTACATACTTATTCCTATTAATGAAGACGTTCATTGGAGTCTAGTCATTATCTGTATCCCTGACAAGGAAGAAGAATCAGGACCACTTGTTCTTCATTTAGACTCATTAGGACTCCATTGTAGCAAATCAATTTTTCGAATTATTAAAAGCTTTTTAAAAGAAGAATGGTGCTTTCTGGATCAAGAAGCTGATATTTCAGATCTAACAGTTTCAGACTGTTGGAAACGACTTCCTGACCATATTGAGGAGAAAAAACTTGTGGTCCCGCAACAGAAAAATGACTATGATTGTGGTCTCTTTGTACTCTTGTTTATGGAACGCTTTATAGAAGAGGCCCCTAAAAGGCTGAAAAAGAAAGATTTAGCAAGGTTTGGAAGGCAGTGGTTCCAACCTGTAGAGGCTTCTAGGTTGAGAAGTAAAATCCGGAAGTTACTCAAGGAAGAATTTCAAAATGCATCCAAGTCAAACTGCTCTAAAGAATCTTCTCCTCTGACTGATGCTTCTGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009628 GO:0009651 GO:0009791 GO:0009987 GO:0010228 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

567

Amino Acids

65.3

Weight (kDa)

7.51

Isoelectric Point (pI)

55.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	328 - 529	2.3e-40	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10570 AT1G10570 AT1G10570 AT1G60220
fragaria_vesca	FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560
malus_domestica	MD13G1091500.v1.1
prunus_persica	Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1
pyrus_communis	pycom13g07950
rosa_chinensis	RchiOBHm_Chr3g0455541 RchiOBHm_Chr4g0443941
rosa_laevigata	RLG00000005875
rosa_multiflora	Rmu_sc0011390.1_g000004
rosa_roxburghii	Rroxscaffold_5G00384480
rosa_rugosa	Rorug03G0008300 Rorug04G0348400 Rorug04G0348500
rosa_samantha	Rh4AG409000 Rh4BG420100 Rh4CG434100 Rh4DG415100
rosa_wichuraiana	Rw3G005410 Rw4G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	383
Acc36I	ACCTGC	1 cut(s)	383
AccB1I	GGYRCC	1 cut(s)	350
AccBSI	CCGCTC	1 cut(s)	168
AccII	CGCG	1 cut(s)	131
AccIII	TCCGGA	1 cut(s)	1614
AclWI	GGATC	3 cut(s)	920, 965, 1377
AcoI	YGGCCR	1 cut(s)	144
AcsI	RAATTY	7 cut(s)	238, 464, 578, 876, 942, 1003, 1634
AcuI	CTGAAG	2 cut(s)	317, 394
AdeI	CACNNNGTG	1 cut(s)	963
AfaI	GTAC	2 cut(s)	93, 1494
AfiI	CCNNNNNNNGG	6 cut(s)	88, 272, 360, 1255, 1435, 1533
AgsI	TTSAA	7 cut(s)	244, 335, 521, 759, 941, 1075, 1640
AloI	GAACNNNNNNTCC	4 cut(s)	830, 862, 1263, 1295
Alw21I	GWGCWC	1 cut(s)	210
Alw26I	GTCTC	1 cut(s)	1490
AlwI	GGATC	3 cut(s)	920, 965, 1377
Ama87I	CYCGRG	2 cut(s)	375, 842
Aor13HI	TCCGGA	1 cut(s)	1614
AoxI	GGCC	2 cut(s)	144, 1524
ApeKI	GCWGC	3 cut(s)	31, 137, 750
ApoI	RAATTY	7 cut(s)	238, 464, 578, 876, 942, 1003, 1634
AseI	ATTAAT	1 cut(s)	1209
Asp700I	GAANNNNTTC	4 cut(s)	282, 876, 1218, 1635
AspS9I	GGNCC	4 cut(s)	1122, 1271, 1453, 1525
AsuHPI	GGTGA	3 cut(s)	423, 698, 743
AsuII	TTCGAA	1 cut(s)	1327
AvaI	CYCGRG	2 cut(s)	375, 842
AvaII	GGWCC	3 cut(s)	1122, 1271, 1453
BaeGI	GKGCMC	2 cut(s)	353, 598
BanI	GGYRCC	1 cut(s)	350
BanII	GRGCYC	2 cut(s)	210, 257
BbsI	GAAGAC	2 cut(s)	444, 1221
Bbv12I	GWGCWC	1 cut(s)	210
BbvI	GCAGC	3 cut(s)	43, 124, 762
BccI	CCATC	2 cut(s)	244, 922
BciVI	GTATCC	1 cut(s)	1256
BcoDI	GTCTC	1 cut(s)	1490
BfaI	CTAG	5 cut(s)	642, 747, 900, 1232, 1596
BfmI	CTRYAG	4 cut(s)	390, 446, 1041, 1584
BfuAI	ACCTGC	1 cut(s)	383
BfuI	GTATCC	1 cut(s)	1256
BglII	AGATCT	1 cut(s)	1390
Bme18I	GGWCC	3 cut(s)	1122, 1271, 1453
BmeT110I	CYCGRG	2 cut(s)	375, 842
BmgT120I	GGNCC	4 cut(s)	1122, 1271, 1453, 1525
BmiI	GGNNCC	7 cut(s)	352, 771, 840, 1123, 1455, 1527, 1577
BmsI	GCATC	4 cut(s)	1043, 1093, 1655, 1678
BpiI	GAAGAC	2 cut(s)	444, 1221
BpmI	CTGGAG	1 cut(s)	326
Bpu14I	TTCGAA	1 cut(s)	1327
BpuEI	CTTGAG	2 cut(s)	206, 1610
BsaBI	GATNNNNATC	1 cut(s)	613
BsaI	GGTCTC	1 cut(s)	1490
BsaJI	CCNNGG	1 cut(s)	129
BsaWI	WCCGGW	1 cut(s)	1614
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 272, 360, 1255, 1435, 1533
Bse118I	RCCGGY	1 cut(s)	157
Bse1I	ACTGG	2 cut(s)	309, 354
Bse3DI	GCAATG	1 cut(s)	517
Bse8I	GATNNNNATC	1 cut(s)	613
BseAI	TCCGGA	1 cut(s)	1614
BseDI	CCNNGG	1 cut(s)	129
BseGI	GGATG	8 cut(s)	198, 255, 316, 490, 835, 928, 1034, 1646
BseJI	GATNNNNATC	1 cut(s)	613
BseLI	CCNNNNNNNGG	6 cut(s)	88, 272, 360, 1255, 1435, 1533
BseMI	GCAATG	1 cut(s)	517
BseMII	CTCAG	3 cut(s)	86, 732, 873
BseNI	ACTGG	2 cut(s)	309, 354
BseRI	GAGGAG	6 cut(s)	194, 337, 340, 848, 1451, 1668
BseSI	GKGCMC	2 cut(s)	353, 598
BseX3I	CGGCCG	1 cut(s)	144
BseXI	GCAGC	3 cut(s)	43, 124, 762
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	2 cut(s)	147, 441
BshFI	GGCC	2 cut(s)	146, 1526
BshNI	GGYRCC	1 cut(s)	350
BsiEI	CGRYCG	2 cut(s)	147, 441
BsiHKAI	GWGCWC	1 cut(s)	210
BsiHKCI	CYCGRG	2 cut(s)	375, 842
BsiSI	CCGG	4 cut(s)	86, 158, 266, 1615
BslFI	GGGAC	2 cut(s)	1135, 1439
BslI	CCNNNNNNNGG	6 cut(s)	88, 272, 360, 1255, 1435, 1533
BsmAI	GTCTC	1 cut(s)	1490
BsmFI	GGGAC	2 cut(s)	1135, 1439
BsnI	GGCC	2 cut(s)	146, 1526
Bso31I	GGTCTC	1 cut(s)	1490
BsoBI	CYCGRG	2 cut(s)	375, 842
Bsp119I	TTCGAA	1 cut(s)	1327
Bsp1286I	GDGCHC	4 cut(s)	210, 257, 353, 598
Bsp13I	TCCGGA	1 cut(s)	1614
Bsp143I	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
BspANI	GGCC	2 cut(s)	146, 1526
BspCNI	CTCAG	3 cut(s)	87, 731, 874
BspEI	TCCGGA	1 cut(s)	1614
BspFNI	CGCG	1 cut(s)	131
BspLI	GGNNCC	7 cut(s)	352, 771, 840, 1123, 1455, 1527, 1577
BspMAI	CTGCAG	1 cut(s)	394
BspMI	ACCTGC	1 cut(s)	383
BspPI	GGATC	3 cut(s)	920, 965, 1377
BspT104I	TTCGAA	1 cut(s)	1327
BspT107I	GGYRCC	1 cut(s)	350
BspTNI	GGTCTC	1 cut(s)	1490
BsrBI	CCGCTC	1 cut(s)	168
BsrDI	GCAATG	1 cut(s)	517
BsrFI	RCCGGY	1 cut(s)	157
BsrI	ACTGG	2 cut(s)	309, 354
BssAI	RCCGGY	1 cut(s)	157
BssECI	CCNNGG	1 cut(s)	129
BssMI	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
Bst4CI	ACNGT	5 cut(s)	450, 731, 1017, 1399, 1409
Bst6I	CTCTTC	3 cut(s)	634, 800, 1515
BstBI	TTCGAA	1 cut(s)	1327
BstDEI	CTNAG	5 cut(s)	95, 718, 882, 960, 1151
BstDSI	CCRYGG	1 cut(s)	129
BstF5I	GGATG	8 cut(s)	198, 255, 316, 490, 835, 928, 1034, 1646
BstFNI	CGCG	1 cut(s)	131
BstKTI	GATC	7 cut(s)	40, 611, 691, 928, 973, 1372, 1393
BstMAI	GTCTC	1 cut(s)	1490
BstMBI	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
BstMCI	CGRYCG	2 cut(s)	147, 441
BstMWI	GCNNNNNNNGC	4 cut(s)	128, 137, 140, 143
BstSFI	CTRYAG	4 cut(s)	390, 446, 1041, 1584
BstSLI	GKGCMC	2 cut(s)	353, 598
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	3 cut(s)	43, 124, 762
BstV2I	GAAGAC	2 cut(s)	444, 1221
BstX2I	RGATCY	1 cut(s)	1390
BstYI	RGATCY	1 cut(s)	1390
BstZI	CGGCCG	1 cut(s)	144
BsuI	GTATCC	1 cut(s)	1256
BsuRI	GGCC	2 cut(s)	146, 1526
BtgI	CCRYGG	1 cut(s)	129
BtgZI	GCGATG	2 cut(s)	176, 189
BtsCI	GGATG	8 cut(s)	198, 255, 316, 490, 835, 928, 1034, 1646
BtsI	GCAGTG	2 cut(s)	544, 1577
BtsIMutI	CAGTG	2 cut(s)	544, 1577
BveI	ACCTGC	1 cut(s)	383
Cfr10I	RCCGGY	1 cut(s)	157
Cfr13I	GGNCC	4 cut(s)	1122, 1271, 1453, 1525
Cfr42I	CCGCGG	1 cut(s)	132
Csp6I	GTAC	2 cut(s)	92, 1493
CviAII	CATG	2 cut(s)	850, 889
CviQI	GTAC	2 cut(s)	92, 1493
DdeI	CTNAG	5 cut(s)	95, 718, 882, 960, 1151
DpnI	GATC	7 cut(s)	39, 610, 690, 927, 972, 1371, 1392
DpnII	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
DraI	TTTAAA	1 cut(s)	1347
DraIII	CACNNNGTG	1 cut(s)	963
EaeI	YGGCCR	1 cut(s)	144
EagI	CGGCCG	1 cut(s)	144
Eam1104I	CTCTTC	3 cut(s)	634, 800, 1515
EarI	CTCTTC	3 cut(s)	634, 800, 1515
Ecl136II	GAGCTC	1 cut(s)	208
EclXI	CGGCCG	1 cut(s)	144
Eco24I	GRGCYC	2 cut(s)	210, 257
Eco31I	GGTCTC	1 cut(s)	1490
Eco47I	GGWCC	3 cut(s)	1122, 1271, 1453
Eco52I	CGGCCG	1 cut(s)	144
Eco53kI	GAGCTC	1 cut(s)	208
Eco57I	CTGAAG	2 cut(s)	317, 394
Eco88I	CYCGRG	2 cut(s)	375, 842
EcoICRI	GAGCTC	1 cut(s)	208
EcoO109I	RGGNCCY	1 cut(s)	1525
EcoRI	GAATTC	1 cut(s)	578
EcoT22I	ATGCAT	2 cut(s)	517, 1648
EcoT38I	GRGCYC	2 cut(s)	210, 257
FaeI	CATG	2 cut(s)	853, 892
FaqI	GGGAC	2 cut(s)	1135, 1439
FatI	CATG	2 cut(s)	849, 888
FauI	CCCGC	2 cut(s)	90, 1464
FokI	GGATG	8 cut(s)	205, 262, 323, 497, 842, 935, 1021, 1633
FriOI	GRGCYC	2 cut(s)	210, 257
FspBI	CTAG	5 cut(s)	642, 747, 900, 1232, 1596
GsuI	CTGGAG	1 cut(s)	326
HaeIII	GGCC	2 cut(s)	146, 1526
HapII	CCGG	4 cut(s)	86, 158, 266, 1615
Hin1II	CATG	2 cut(s)	853, 892
HindIII	AAGCTT	3 cut(s)	281, 1148, 1339
HinfI	GANTC	9 cut(s)	74, 808, 896, 903, 1228, 1265, 1292, 1302, 1670
HpaII	CCGG	4 cut(s)	86, 158, 266, 1615
HphI	GGTGA	3 cut(s)	423, 698, 743
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	5 cut(s)	206, 1149, 1159, 1180, 1560
HpyCH4III	ACNGT	5 cut(s)	450, 731, 1017, 1399, 1409
HpyCH4IV	ACGT	1 cut(s)	1218
HpyCH4V	TGCA	5 cut(s)	392, 515, 549, 586, 1646
HpyF10VI	GCNNNNNNNGC	4 cut(s)	128, 137, 140, 143
HpyF3I	CTNAG	5 cut(s)	95, 718, 882, 960, 1151
HpySE526I	ACGT	1 cut(s)	1218
Hsp92II	CATG	2 cut(s)	853, 892
Kpn2I	TCCGGA	1 cut(s)	1614
KspI	CCGCGG	1 cut(s)	132
Kzo9I	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
LmnI	GCTCC	3 cut(s)	181, 215, 344
Lsp1109I	GCAGC	3 cut(s)	43, 124, 762
LweI	GCATC	4 cut(s)	1043, 1093, 1655, 1678
MaeI	CTAG	5 cut(s)	642, 747, 900, 1232, 1596
MaeII	ACGT	1 cut(s)	1218
MaeIII	GTNAC	3 cut(s)	542, 725, 1620
MalI	GATC	7 cut(s)	39, 610, 690, 927, 972, 1371, 1392
MbiI	CCGCTC	1 cut(s)	168
MboI	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
MflI	RGATCY	1 cut(s)	1390
MhlI	GDGCHC	4 cut(s)	210, 257, 353, 598
MluCI	AATT	9 cut(s)	238, 464, 578, 876, 942, 1003, 1320, 1329, 1634
MlyI	GAGTC	5 cut(s)	817, 890, 1237, 1286, 1296
MmeI	TCCRAC	3 cut(s)	462, 1391, 1603
Mph1103I	ATGCAT	2 cut(s)	517, 1648
MroI	TCCGGA	1 cut(s)	1614
MroXI	GAANNNNTTC	4 cut(s)	282, 876, 1218, 1635
MseI	TTAA	5 cut(s)	222, 459, 1209, 1335, 1346
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	4 cut(s)	86, 158, 266, 1615
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	4 cut(s)	128, 137, 140, 143
NdeII	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
NlaIII	CATG	2 cut(s)	853, 892
NlaIV	GGNNCC	7 cut(s)	352, 771, 840, 1123, 1455, 1527, 1577
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	2 cut(s)	542, 725
NsiI	ATGCAT	2 cut(s)	517, 1648
NspV	TTCGAA	1 cut(s)	1327
PaqCI	CACCTGC	1 cut(s)	383
PdmI	GAANNNNTTC	4 cut(s)	282, 876, 1218, 1635
PfeI	GAWTC	4 cut(s)	74, 903, 1265, 1670
PleI	GAGTC	5 cut(s)	816, 890, 1236, 1286, 1296
PpsI	GAGTC	5 cut(s)	816, 890, 1236, 1286, 1296
PshBI	ATTAAT	1 cut(s)	1209
Psp124BI	GAGCTC	1 cut(s)	210
PspN4I	GGNNCC	7 cut(s)	352, 771, 840, 1123, 1455, 1527, 1577
PspPI	GGNCC	4 cut(s)	1122, 1271, 1453, 1525
PstI	CTGCAG	1 cut(s)	394
PsuI	RGATCY	1 cut(s)	1390
RsaI	GTAC	2 cut(s)	93, 1494
RsaNI	GTAC	2 cut(s)	92, 1493
SacI	GAGCTC	1 cut(s)	210
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	5 cut(s)	222, 459, 1209, 1335, 1346
Sau3AI	GATC	7 cut(s)	37, 608, 688, 925, 970, 1369, 1390
Sau96I	GGNCC	4 cut(s)	1122, 1271, 1453, 1525
SchI	GAGTC	5 cut(s)	817, 890, 1237, 1286, 1296
SduI	GDGCHC	4 cut(s)	210, 257, 353, 598
SfaNI	GCATC	4 cut(s)	1043, 1093, 1655, 1678
SfcI	CTRYAG	4 cut(s)	390, 446, 1041, 1584
Sfr303I	CCGCGG	1 cut(s)	132
SfuI	TTCGAA	1 cut(s)	1327
SgrAI	CRCCGGYG	1 cut(s)	157
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	3 cut(s)	1122, 1271, 1453
SmlI	CTYRAG	2 cut(s)	185, 1625
SmoI	CTYRAG	2 cut(s)	185, 1625
Sse9I	AATT	9 cut(s)	238, 464, 578, 876, 942, 1003, 1320, 1329, 1634
SspMI	CTAG	5 cut(s)	642, 747, 900, 1232, 1596
SstI	GAGCTC	1 cut(s)	210
TaaI	ACNGT	5 cut(s)	450, 731, 1017, 1399, 1409
TaiI	ACGT	1 cut(s)	1221
TaqI	TCGA	3 cut(s)	210, 607, 1327
TaqII	GACCGA	1 cut(s)	455
TasI	AATT	9 cut(s)	238, 464, 578, 876, 942, 1003, 1320, 1329, 1634
TatI	WGTACW	1 cut(s)	1492
TauI	GCSGC	7 cut(s)	134, 137, 143, 146, 171, 174, 229
TfiI	GAWTC	4 cut(s)	74, 903, 1265, 1670
Tru1I	TTAA	5 cut(s)	222, 459, 1209, 1335, 1346
Tru9I	TTAA	5 cut(s)	222, 459, 1209, 1335, 1346
TscAI	CASTG	2 cut(s)	551, 1577
TseFI	GTSAC	2 cut(s)	542, 725
TseI	GCWGC	3 cut(s)	31, 137, 750
Tsp45I	GTSAC	2 cut(s)	542, 725
TspRI	CASTG	2 cut(s)	551, 1577
VpaK11BI	GGWCC	3 cut(s)	1122, 1271, 1453
VspI	ATTAAT	1 cut(s)	1209
XapI	RAATTY	7 cut(s)	238, 464, 578, 876, 942, 1003, 1634
XbaI	TCTAGA	1 cut(s)	899
XcmI	CCANNNNNNNNNTGG	1 cut(s)	823
XmnI	GAANNNNTTC	4 cut(s)	282, 876, 1218, 1635
XspI	CTAG	5 cut(s)	642, 747, 900, 1232, 1596
Zsp2I	ATGCAT	2 cut(s)	517, 1648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.