Ubiquitin-like-specific protease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10570 AT1G10570 AT1G10570 AT1G60220 |
| fragaria_vesca | FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 |
| malus_domestica | MD13G1091500.v1.1 |
| prunus_persica | Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 |
| pyrus_communis | pycom13g07950 |
| rosa_chinensis | RchiOBHm_Chr3g0455541 RchiOBHm_Chr4g0443941 |
| rosa_laevigata | RLG00000005875 |
| rosa_multiflora | Rmu_sc0011390.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00384480 |
| rosa_rugosa | Rorug03G0008300 Rorug04G0348400 Rorug04G0348500 |
| rosa_samantha | Rh4AG409000 Rh4BG420100 Rh4CG434100 Rh4DG415100 |
| rosa_wichuraiana | Rw3G005410 Rw4G035130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 374 |
| Acc36I | ACCTGC | 1 cut(s) | 374 |
| AccB1I | GGYRCC | 1 cut(s) | 341 |
| AccBSI | CCGCTC | 1 cut(s) | 159 |
| AccII | CGCG | 1 cut(s) | 131 |
| AccIII | TCCGGA | 1 cut(s) | 1605 |
| AclWI | GGATC | 3 cut(s) | 911, 956, 1368 |
| AcoI | YGGCCR | 1 cut(s) | 135 |
| AcsI | RAATTY | 6 cut(s) | 229, 569, 867, 933, 994, 1625 |
| AcuI | CTGAAG | 2 cut(s) | 308, 385 |
| AdeI | CACNNNGTG | 1 cut(s) | 954 |
| AfaI | GTAC | 2 cut(s) | 93, 1485 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 88, 263, 351, 1246, 1426, 1524 |
| AgsI | TTSAA | 6 cut(s) | 235, 326, 512, 932, 1066, 1631 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 821, 853, 1254, 1286 |
| Alw26I | GTCTC | 1 cut(s) | 1481 |
| AlwI | GGATC | 3 cut(s) | 911, 956, 1368 |
| Ama87I | CYCGRG | 3 cut(s) | 366, 427, 833 |
| Aor13HI | TCCGGA | 1 cut(s) | 1605 |
| AoxI | GGCC | 2 cut(s) | 135, 1515 |
| ApeKI | GCWGC | 2 cut(s) | 31, 741 |
| ApoI | RAATTY | 6 cut(s) | 229, 569, 867, 933, 994, 1625 |
| AseI | ATTAAT | 1 cut(s) | 1200 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 273, 867, 1209, 1626 |
| AspS9I | GGNCC | 4 cut(s) | 1113, 1262, 1444, 1516 |
| AsuHPI | GGTGA | 3 cut(s) | 414, 689, 734 |
| AsuII | TTCGAA | 1 cut(s) | 1318 |
| AvaI | CYCGRG | 3 cut(s) | 366, 427, 833 |
| AvaII | GGWCC | 3 cut(s) | 1113, 1262, 1444 |
| BaeGI | GKGCMC | 2 cut(s) | 344, 589 |
| BanI | GGYRCC | 1 cut(s) | 341 |
| BanII | GRGCYC | 1 cut(s) | 248 |
| BbsI | GAAGAC | 1 cut(s) | 1212 |
| BbvI | GCAGC | 2 cut(s) | 43, 753 |
| BccI | CCATC | 2 cut(s) | 235, 913 |
| BciVI | GTATCC | 1 cut(s) | 1247 |
| BcoDI | GTCTC | 1 cut(s) | 1481 |
| BfaI | CTAG | 5 cut(s) | 633, 738, 891, 1223, 1587 |
| BfmI | CTRYAG | 3 cut(s) | 381, 1032, 1575 |
| BfuAI | ACCTGC | 1 cut(s) | 374 |
| BfuI | GTATCC | 1 cut(s) | 1247 |
| BglII | AGATCT | 1 cut(s) | 1381 |
| BisI | GCNGC | 7 cut(s) | 32, 132, 135, 160, 163, 218, 742 |
| BlsI | GCNGC | 7 cut(s) | 33, 133, 136, 161, 164, 219, 743 |
| Bme18I | GGWCC | 3 cut(s) | 1113, 1262, 1444 |
| BmeT110I | CYCGRG | 3 cut(s) | 366, 427, 833 |
| BmgT120I | GGNCC | 4 cut(s) | 1113, 1262, 1444, 1516 |
| BmiI | GGNNCC | 7 cut(s) | 343, 762, 831, 1114, 1446, 1518, 1568 |
| BmsI | GCATC | 4 cut(s) | 1034, 1084, 1646, 1669 |
| BpiI | GAAGAC | 1 cut(s) | 1212 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 425, 457 |
| BpmI | CTGGAG | 1 cut(s) | 317 |
| Bpu14I | TTCGAA | 1 cut(s) | 1318 |
| BpuEI | CTTGAG | 2 cut(s) | 197, 1601 |
| BsaI | GGTCTC | 1 cut(s) | 1481 |
| BsaJI | CCNNGG | 1 cut(s) | 129 |
| BsaWI | WCCGGW | 1 cut(s) | 1605 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 88, 263, 351, 1246, 1426, 1524 |
| Bse118I | RCCGGY | 1 cut(s) | 148 |
| Bse1I | ACTGG | 2 cut(s) | 300, 345 |
| Bse3DI | GCAATG | 2 cut(s) | 508, 744 |
| BseAI | TCCGGA | 1 cut(s) | 1605 |
| BseDI | CCNNGG | 1 cut(s) | 129 |
| BseGI | GGATG | 7 cut(s) | 246, 307, 481, 826, 919, 1025, 1637 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 88, 263, 351, 1246, 1426, 1524 |
| BseMI | GCAATG | 2 cut(s) | 508, 744 |
| BseMII | CTCAG | 3 cut(s) | 86, 723, 864 |
| BseNI | ACTGG | 2 cut(s) | 300, 345 |
| BseRI | GAGGAG | 6 cut(s) | 185, 328, 331, 839, 1442, 1659 |
| BseSI | GKGCMC | 2 cut(s) | 344, 589 |
| BseX3I | CGGCCG | 1 cut(s) | 135 |
| BseXI | GCAGC | 2 cut(s) | 43, 753 |
| Bsh1236I | CGCG | 1 cut(s) | 131 |
| Bsh1285I | CGRYCG | 1 cut(s) | 138 |
| BshFI | GGCC | 2 cut(s) | 137, 1517 |
| BshNI | GGYRCC | 1 cut(s) | 341 |
| BsiEI | CGRYCG | 1 cut(s) | 138 |
| BsiHKCI | CYCGRG | 3 cut(s) | 366, 427, 833 |
| BsiSI | CCGG | 4 cut(s) | 86, 149, 257, 1606 |
| BslFI | GGGAC | 2 cut(s) | 1126, 1430 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 88, 263, 351, 1246, 1426, 1524 |
| BsmAI | GTCTC | 1 cut(s) | 1481 |
| BsmFI | GGGAC | 2 cut(s) | 1126, 1430 |
| BsnI | GGCC | 2 cut(s) | 137, 1517 |
| Bso31I | GGTCTC | 1 cut(s) | 1481 |
| BsoBI | CYCGRG | 3 cut(s) | 366, 427, 833 |
| Bsp119I | TTCGAA | 1 cut(s) | 1318 |
| Bsp1286I | GDGCHC | 3 cut(s) | 248, 344, 589 |
| Bsp13I | TCCGGA | 1 cut(s) | 1605 |
| Bsp143I | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| BspANI | GGCC | 2 cut(s) | 137, 1517 |
| BspCNI | CTCAG | 3 cut(s) | 87, 722, 865 |
| BspEI | TCCGGA | 1 cut(s) | 1605 |
| BspFNI | CGCG | 1 cut(s) | 131 |
| BspLI | GGNNCC | 7 cut(s) | 343, 762, 831, 1114, 1446, 1518, 1568 |
| BspMAI | CTGCAG | 1 cut(s) | 385 |
| BspMI | ACCTGC | 1 cut(s) | 374 |
| BspPI | GGATC | 3 cut(s) | 911, 956, 1368 |
| BspT104I | TTCGAA | 1 cut(s) | 1318 |
| BspT107I | GGYRCC | 1 cut(s) | 341 |
| BspTNI | GGTCTC | 1 cut(s) | 1481 |
| BsrBI | CCGCTC | 1 cut(s) | 159 |
| BsrDI | GCAATG | 2 cut(s) | 508, 744 |
| BsrFI | RCCGGY | 1 cut(s) | 148 |
| BsrI | ACTGG | 2 cut(s) | 300, 345 |
| BssAI | RCCGGY | 1 cut(s) | 148 |
| BssECI | CCNNGG | 1 cut(s) | 129 |
| BssMI | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| Bst4CI | ACNGT | 4 cut(s) | 722, 1008, 1390, 1400 |
| Bst6I | CTCTTC | 4 cut(s) | 20, 448, 791, 1506 |
| BstBI | TTCGAA | 1 cut(s) | 1318 |
| BstC8I | GCNNGC | 1 cut(s) | 434 |
| BstDEI | CTNAG | 5 cut(s) | 95, 709, 873, 951, 1142 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstF5I | GGATG | 7 cut(s) | 246, 307, 481, 826, 919, 1025, 1637 |
| BstFNI | CGCG | 1 cut(s) | 131 |
| BstKTI | GATC | 6 cut(s) | 40, 682, 919, 964, 1363, 1384 |
| BstMAI | GTCTC | 1 cut(s) | 1481 |
| BstMBI | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| BstMCI | CGRYCG | 1 cut(s) | 138 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 128 |
| BstSFI | CTRYAG | 3 cut(s) | 381, 1032, 1575 |
| BstSLI | GKGCMC | 2 cut(s) | 344, 589 |
| BstUI | CGCG | 1 cut(s) | 131 |
| BstV1I | GCAGC | 2 cut(s) | 43, 753 |
| BstV2I | GAAGAC | 1 cut(s) | 1212 |
| BstX2I | RGATCY | 1 cut(s) | 1381 |
| BstYI | RGATCY | 1 cut(s) | 1381 |
| BstZI | CGGCCG | 1 cut(s) | 135 |
| BsuI | GTATCC | 1 cut(s) | 1247 |
| BsuRI | GGCC | 2 cut(s) | 137, 1517 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtgZI | GCGATG | 2 cut(s) | 167, 180 |
| BtsCI | GGATG | 7 cut(s) | 246, 307, 481, 826, 919, 1025, 1637 |
| BtsI | GCAGTG | 2 cut(s) | 535, 1568 |
| BtsIMutI | CAGTG | 2 cut(s) | 535, 1568 |
| BveI | ACCTGC | 1 cut(s) | 374 |
| Cac8I | GCNNGC | 1 cut(s) | 434 |
| Cfr10I | RCCGGY | 1 cut(s) | 148 |
| Cfr13I | GGNCC | 4 cut(s) | 1113, 1262, 1444, 1516 |
| Cfr42I | CCGCGG | 1 cut(s) | 132 |
| Csp6I | GTAC | 2 cut(s) | 92, 1484 |
| CviAII | CATG | 2 cut(s) | 841, 880 |
| CviQI | GTAC | 2 cut(s) | 92, 1484 |
| DdeI | CTNAG | 5 cut(s) | 95, 709, 873, 951, 1142 |
| DpnI | GATC | 6 cut(s) | 39, 681, 918, 963, 1362, 1383 |
| DpnII | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| DraI | TTTAAA | 1 cut(s) | 1338 |
| DraIII | CACNNNGTG | 1 cut(s) | 954 |
| EaeI | YGGCCR | 1 cut(s) | 135 |
| EagI | CGGCCG | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 4 cut(s) | 20, 448, 791, 1506 |
| EarI | CTCTTC | 4 cut(s) | 20, 448, 791, 1506 |
| EclXI | CGGCCG | 1 cut(s) | 135 |
| Eco24I | GRGCYC | 1 cut(s) | 248 |
| Eco31I | GGTCTC | 1 cut(s) | 1481 |
| Eco47I | GGWCC | 3 cut(s) | 1113, 1262, 1444 |
| Eco52I | CGGCCG | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 2 cut(s) | 308, 385 |
| Eco88I | CYCGRG | 3 cut(s) | 366, 427, 833 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1516 |
| EcoRI | GAATTC | 1 cut(s) | 569 |
| EcoT22I | ATGCAT | 2 cut(s) | 508, 1639 |
| EcoT38I | GRGCYC | 1 cut(s) | 248 |
| FaeI | CATG | 2 cut(s) | 844, 883 |
| FaqI | GGGAC | 2 cut(s) | 1126, 1430 |
| FatI | CATG | 2 cut(s) | 840, 879 |
| FauI | CCCGC | 2 cut(s) | 90, 1455 |
| Fnu4HI | GCNGC | 7 cut(s) | 32, 132, 135, 160, 163, 218, 742 |
| FokI | GGATG | 7 cut(s) | 253, 314, 488, 833, 926, 1012, 1624 |
| FriOI | GRGCYC | 1 cut(s) | 248 |
| Fsp4HI | GCNGC | 7 cut(s) | 32, 132, 135, 160, 163, 218, 742 |
| FspBI | CTAG | 5 cut(s) | 633, 738, 891, 1223, 1587 |
| GluI | GCNGC | 7 cut(s) | 32, 132, 135, 160, 163, 218, 742 |
| GsuI | CTGGAG | 1 cut(s) | 317 |
| HaeIII | GGCC | 2 cut(s) | 137, 1517 |
| HapII | CCGG | 4 cut(s) | 86, 149, 257, 1606 |
| Hin1II | CATG | 2 cut(s) | 844, 883 |
| HindIII | AAGCTT | 3 cut(s) | 272, 1139, 1330 |
| HinfI | GANTC | 9 cut(s) | 74, 799, 887, 894, 1219, 1256, 1283, 1293, 1661 |
| HpaII | CCGG | 4 cut(s) | 86, 149, 257, 1606 |
| HphI | GGTGA | 3 cut(s) | 414, 689, 734 |
| Hpy99I | CGWCG | 1 cut(s) | 143 |
| HpyAV | CCTTC | 6 cut(s) | 197, 630, 1140, 1150, 1171, 1551 |
| HpyCH4III | ACNGT | 4 cut(s) | 722, 1008, 1390, 1400 |
| HpyCH4IV | ACGT | 1 cut(s) | 1209 |
| HpyCH4V | TGCA | 6 cut(s) | 383, 506, 540, 577, 749, 1637 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 128 |
| HpyF3I | CTNAG | 5 cut(s) | 95, 709, 873, 951, 1142 |
| HpySE526I | ACGT | 1 cut(s) | 1209 |
| Hsp92II | CATG | 2 cut(s) | 844, 883 |
| Kpn2I | TCCGGA | 1 cut(s) | 1605 |
| KspI | CCGCGG | 1 cut(s) | 132 |
| Kzo9I | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| LmnI | GCTCC | 3 cut(s) | 172, 206, 335 |
| Lsp1109I | GCAGC | 2 cut(s) | 43, 753 |
| LweI | GCATC | 4 cut(s) | 1034, 1084, 1646, 1669 |
| MaeI | CTAG | 5 cut(s) | 633, 738, 891, 1223, 1587 |
| MaeII | ACGT | 1 cut(s) | 1209 |
| MaeIII | GTNAC | 3 cut(s) | 533, 716, 1611 |
| MalI | GATC | 6 cut(s) | 39, 681, 918, 963, 1362, 1383 |
| MbiI | CCGCTC | 1 cut(s) | 159 |
| MboI | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| MflI | RGATCY | 1 cut(s) | 1381 |
| MhlI | GDGCHC | 3 cut(s) | 248, 344, 589 |
| MluCI | AATT | 9 cut(s) | 229, 455, 569, 867, 933, 994, 1311, 1320, 1625 |
| MlyI | GAGTC | 5 cut(s) | 808, 881, 1228, 1277, 1287 |
| MmeI | TCCRAC | 3 cut(s) | 453, 1382, 1594 |
| Mph1103I | ATGCAT | 2 cut(s) | 508, 1639 |
| MroI | TCCGGA | 1 cut(s) | 1605 |
| MroXI | GAANNNNTTC | 4 cut(s) | 273, 867, 1209, 1626 |
| MseI | TTAA | 6 cut(s) | 213, 450, 1200, 1326, 1337, 1592 |
| MspA1I | CMGCKG | 1 cut(s) | 131 |
| MspI | CCGG | 4 cut(s) | 86, 149, 257, 1606 |
| MvnI | CGCG | 1 cut(s) | 131 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 128 |
| NdeII | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| NlaIII | CATG | 2 cut(s) | 844, 883 |
| NlaIV | GGNNCC | 7 cut(s) | 343, 762, 831, 1114, 1446, 1518, 1568 |
| NmeAIII | GCCGAG | 1 cut(s) | 43 |
| NmuCI | GTSAC | 2 cut(s) | 533, 716 |
| NsiI | ATGCAT | 2 cut(s) | 508, 1639 |
| NspV | TTCGAA | 1 cut(s) | 1318 |
| PaeR7I | CTCGAG | 1 cut(s) | 366 |
| PaqCI | CACCTGC | 1 cut(s) | 374 |
| PdmI | GAANNNNTTC | 4 cut(s) | 273, 867, 1209, 1626 |
| PfeI | GAWTC | 4 cut(s) | 74, 894, 1256, 1661 |
| PkrI | GCNGC | 7 cut(s) | 33, 133, 136, 161, 164, 219, 743 |
| PleI | GAGTC | 5 cut(s) | 807, 881, 1227, 1277, 1287 |
| PpsI | GAGTC | 5 cut(s) | 807, 881, 1227, 1277, 1287 |
| PshBI | ATTAAT | 1 cut(s) | 1200 |
| PspN4I | GGNNCC | 7 cut(s) | 343, 762, 831, 1114, 1446, 1518, 1568 |
| PspPI | GGNCC | 4 cut(s) | 1113, 1262, 1444, 1516 |
| PspXI | VCTCGAGB | 1 cut(s) | 366 |
| PstI | CTGCAG | 1 cut(s) | 385 |
| PsuI | RGATCY | 1 cut(s) | 1381 |
| RsaI | GTAC | 2 cut(s) | 93, 1485 |
| RsaNI | GTAC | 2 cut(s) | 92, 1484 |
| SacII | CCGCGG | 1 cut(s) | 132 |
| SaqAI | TTAA | 6 cut(s) | 213, 450, 1200, 1326, 1337, 1592 |
| SatI | GCNGC | 7 cut(s) | 32, 132, 135, 160, 163, 218, 742 |
| Sau3AI | GATC | 6 cut(s) | 37, 679, 916, 961, 1360, 1381 |
| Sau96I | GGNCC | 4 cut(s) | 1113, 1262, 1444, 1516 |
| SchI | GAGTC | 5 cut(s) | 808, 881, 1228, 1277, 1287 |
| SduI | GDGCHC | 3 cut(s) | 248, 344, 589 |
| SfaNI | GCATC | 4 cut(s) | 1034, 1084, 1646, 1669 |
| SfcI | CTRYAG | 3 cut(s) | 381, 1032, 1575 |
| Sfr274I | CTCGAG | 1 cut(s) | 366 |
| Sfr303I | CCGCGG | 1 cut(s) | 132 |
| SfuI | TTCGAA | 1 cut(s) | 1318 |
| SgrAI | CRCCGGYG | 1 cut(s) | 148 |
| SgrBI | CCGCGG | 1 cut(s) | 132 |
| SinI | GGWCC | 3 cut(s) | 1113, 1262, 1444 |
| SlaI | CTCGAG | 1 cut(s) | 366 |
| SmlI | CTYRAG | 3 cut(s) | 176, 366, 1616 |
| SmoI | CTYRAG | 3 cut(s) | 176, 366, 1616 |
| Sse9I | AATT | 9 cut(s) | 229, 455, 569, 867, 933, 994, 1311, 1320, 1625 |
| SspMI | CTAG | 5 cut(s) | 633, 738, 891, 1223, 1587 |
| TaaI | ACNGT | 4 cut(s) | 722, 1008, 1390, 1400 |
| TaiI | ACGT | 1 cut(s) | 1212 |
| TaqI | TCGA | 3 cut(s) | 201, 367, 1318 |
| TasI | AATT | 9 cut(s) | 229, 455, 569, 867, 933, 994, 1311, 1320, 1625 |
| TatI | WGTACW | 1 cut(s) | 1483 |
| TauI | GCSGC | 5 cut(s) | 134, 137, 162, 165, 220 |
| TfiI | GAWTC | 4 cut(s) | 74, 894, 1256, 1661 |
| Tru1I | TTAA | 6 cut(s) | 213, 450, 1200, 1326, 1337, 1592 |
| Tru9I | TTAA | 6 cut(s) | 213, 450, 1200, 1326, 1337, 1592 |
| TscAI | CASTG | 2 cut(s) | 542, 1568 |
| TseFI | GTSAC | 2 cut(s) | 533, 716 |
| TseI | GCWGC | 2 cut(s) | 31, 741 |
| Tsp45I | GTSAC | 2 cut(s) | 533, 716 |
| TspRI | CASTG | 2 cut(s) | 542, 1568 |
| VpaK11BI | GGWCC | 3 cut(s) | 1113, 1262, 1444 |
| VspI | ATTAAT | 1 cut(s) | 1200 |
| XapI | RAATTY | 6 cut(s) | 229, 569, 867, 933, 994, 1625 |
| XbaI | TCTAGA | 1 cut(s) | 890 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 814 |
| XhoI | CTCGAG | 1 cut(s) | 366 |
| XmnI | GAANNNNTTC | 4 cut(s) | 273, 867, 1209, 1626 |
| XspI | CTAG | 5 cut(s) | 633, 738, 891, 1223, 1587 |
| Zsp2I | ATGCAT | 2 cut(s) | 508, 1639 |