Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0004755

Physical Location & Seq

Genomic Coordinates Reverse (-)

63847828 .. 63854431

Gene Structure 6604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00384480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGAAGGAGAGAGAGCCGAGAAGAAGAGGCAGCTTGATCTTGACTTTAACAAACTCTTGGCCGACAATGACGATTCTGACCCGCCGGAGGTACTGAGAGTGAAGAAGCCCAAAGCCATAGCCACCACCGCGGCGGCCGACGAGGCACCCGCGATGAGCGGCGGCGATCAGCAGCGAGATGAGGAGCTTGAGAAGATGAACAATACCGAGCTCGAAGGAGCGATTAAGCGGCAAGTAGAAAATTTGAAGCGGATGGCCTCTATATTGCCGGACAAAGGCGAAAAGCTTCGGATTTGTCTGAAGAAACTGGAGGATGAACAGGGGAGGAGGAGGCTTGAACGTTCCGAGAGGGGCACCAGTAAGGGGGAGAAGCCTACCCGAGCGACGAGCTCTGCAGGTGTTTCTAATGGCTTCAGAGATAAGGAGGCTACATCACCCCCGGGCGAGCTAGAGTCTTCATTTAATAAATTCTTTTCTAAAAAGTTGGATGACAATCAGAAAGATTGTAGCAAGGGAAATGCATTTGAAAGAGAGTTATCAACTTTGGGTCACTGCAACTGCCAGAAAAGGAACAATAATGGAGAATTCTTGCAAAAGGGGGCACAGAAAGGTCGATCTTCATCAAGACATTTCCCTTCTCAAAGCCCTAGCAACTTTTATCGAGATAAAGATAAAAGTTTTCTCTCAAATGGTGATCGTAAAGGCAGAGCTTCTTCCAATAACTCAGGTCGTCACGGTGAGGAAAACTTCTCTAGCAGCTTTGCAAAAAGGGAGGAACCATATCAACTTCGGAATAGGGATAGGAATAGGAAGAGTCAGACCATTTTACTTGTGGATGAGGAAGAACCCGAGTTCATGGACACCACAGAGCAAATAGAAGAAATTCCTGAGAGCATGAAAGACTCTAGAATCTACTATCCATCAAGGGATGATCCACATTCTGTTGAAATTTGTTATACAGACACTAAGTGCCTTGATCCTCAAAGCTACTTGACATCAGCTATTATGAATTTCTACATACGGTATTTACATCAACAAGCATCCCCTACAGACAGGGGAATATGTGCGTTTCATTTCTTCAACACCTTTTTTTACAATAAGCTCAAAGATGCTGTATCAGAAAAGGGGACCAACAAGGATAACCTTTTTGTCAAGCTTAGAAGGTGGTGGAAGGGTGTTGATATATTTCAGAAGGCTTACATACTTATTCCTATTAACGAAGACGTTCATTGGAGTCTAGTCATTATCTGTATCCCTGACAAGGAAGAAGAATCAGGACCACTTGTTCTTCATTTAGACTCATTAGGACTCCATTGTAGCAAATCAATTTTTCGAATTATTAAAAGCTTTTTAAAAGAAGAATGGTGCTATCTGGATCAAGAAGTTGATATTTCAGATCTAACAGTTTCAGACTGTTGGAAACGACTTCCTGACCATATTGAGGAGAAAAAACTTGTGGTCCCGCAACAGAAAAATGACTATGATTGTGGTCTCTTTGTACTCTTGTTTATGGAACGCTTTATAGAAGAGGCCCCTAAAAGGCTGAAAAAGAAAGATTTAGCAAGGTTTGGAAGGCAGTGGTTCCAACCTGTAGAGGCTTCTAGGTTGAGAAGTAAAATCCGGAAGTTACTCAAGGAAGAATTTCAAAATGCATCCAAGTCAAACTGCTCTAAAGAAACTTCTCCTCCGACTGATGCTTCTGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009628 GO:0009651 GO:0009791 GO:0009987 GO:0010228 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

569

Amino Acids

65.67

Weight (kDa)

7.12

Isoelectric Point (pI)

53.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	330 - 531	1.9e-40	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10570 AT1G10570 AT1G10570 AT1G60220
fragaria_vesca	FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560
malus_domestica	MD13G1091500.v1.1
prunus_persica	Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1
pyrus_communis	pycom13g07950
rosa_chinensis	RchiOBHm_Chr3g0455541 RchiOBHm_Chr4g0443941
rosa_laevigata	RLG00000005875
rosa_multiflora	Rmu_sc0011390.1_g000004
rosa_roxburghii	Rroxscaffold_5G00384480
rosa_rugosa	Rorug03G0008300 Rorug04G0348400 Rorug04G0348500
rosa_samantha	Rh4AG409000 Rh4BG420100 Rh4CG434100 Rh4DG415100
rosa_wichuraiana	Rw3G005410 Rw4G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	386
Acc36I	ACCTGC	1 cut(s)	386
AccB1I	GGYRCC	2 cut(s)	145, 353
AccBSI	CCGCTC	1 cut(s)	159
AccII	CGCG	2 cut(s)	131, 152
AccIII	TCCGGA	1 cut(s)	1620
AclI	AACGTT	1 cut(s)	340
AclWI	GGATC	3 cut(s)	926, 971, 1383
AcoI	YGGCCR	2 cut(s)	60, 135
AcsI	RAATTY	7 cut(s)	241, 467, 584, 882, 948, 1009, 1640
AcuI	CTGAAG	2 cut(s)	320, 397
AdeI	CACNNNGTG	1 cut(s)	969
AfaI	GTAC	2 cut(s)	93, 1500
AfiI	CCNNNNNNNGG	6 cut(s)	88, 275, 363, 1261, 1441, 1539
AgsI	TTSAA	6 cut(s)	247, 338, 527, 947, 1081, 1646
AloI	GAACNNNNNNTCC	2 cut(s)	1269, 1301
Alw21I	GWGCWC	2 cut(s)	213, 392
Alw26I	GTCTC	1 cut(s)	1496
AlwI	GGATC	3 cut(s)	926, 971, 1383
Ama87I	CYCGRG	3 cut(s)	378, 439, 848
Aor13HI	TCCGGA	1 cut(s)	1620
AoxI	GGCC	4 cut(s)	60, 135, 255, 1530
ApeKI	GCWGC	3 cut(s)	31, 172, 756
ApoI	RAATTY	7 cut(s)	241, 467, 584, 882, 948, 1009, 1640
Asp700I	GAANNNNTTC	4 cut(s)	285, 882, 1224, 1641
AspS9I	GGNCC	4 cut(s)	1128, 1277, 1459, 1531
AsuC2I	CCSGG	2 cut(s)	440, 441
AsuHPI	GGTGA	3 cut(s)	426, 704, 749
AsuII	TTCGAA	1 cut(s)	1333
AvaI	CYCGRG	3 cut(s)	378, 439, 848
AvaII	GGWCC	3 cut(s)	1128, 1277, 1459
BaeGI	GKGCMC	2 cut(s)	356, 604
BanI	GGYRCC	2 cut(s)	145, 353
BanII	GRGCYC	2 cut(s)	213, 392
BbsI	GAAGAC	2 cut(s)	447, 1227
Bbv12I	GWGCWC	2 cut(s)	213, 392
BbvI	GCAGC	3 cut(s)	43, 184, 768
BccI	CCATC	2 cut(s)	247, 928
BciVI	GTATCC	1 cut(s)	1262
BcnI	CCSGG	2 cut(s)	440, 441
BcoDI	GTCTC	1 cut(s)	1496
BfaI	CTAG	6 cut(s)	449, 648, 753, 906, 1238, 1602
BfmI	CTRYAG	3 cut(s)	393, 1047, 1590
BfuAI	ACCTGC	1 cut(s)	386
BfuI	GTATCC	1 cut(s)	1262
BglI	GCCNNNNNGGC	1 cut(s)	143
BglII	AGATCT	1 cut(s)	1396
BisI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 757
BlsI	GCNGC	8 cut(s)	33, 133, 136, 161, 164, 174, 231, 758
Bme1390I	CCNGG	2 cut(s)	440, 441
Bme18I	GGWCC	3 cut(s)	1128, 1277, 1459
BmeT110I	CYCGRG	3 cut(s)	378, 439, 848
BmgT120I	GGNCC	4 cut(s)	1128, 1277, 1459, 1531
BmiI	GGNNCC	7 cut(s)	147, 355, 777, 1129, 1461, 1533, 1583
BmrFI	CCNGG	2 cut(s)	440, 441
BmsI	GCATC	4 cut(s)	1049, 1099, 1661, 1684
BpiI	GAAGAC	2 cut(s)	447, 1227
BpmI	CTGGAG	1 cut(s)	329
Bpu14I	TTCGAA	1 cut(s)	1333
BpuEI	CTTGAG	2 cut(s)	209, 1616
BpuMI	CCSGG	2 cut(s)	440, 441
BsaBI	GATNNNNATC	2 cut(s)	492, 619
BsaI	GGTCTC	1 cut(s)	1496
BsaJI	CCNNGG	3 cut(s)	129, 438, 439
BsaWI	WCCGGW	1 cut(s)	1620
BsaXI	ACNNNNNCTCC	2 cut(s)	1669, 1699
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 275, 363, 1261, 1441, 1539
Bse1I	ACTGG	2 cut(s)	312, 357
Bse8I	GATNNNNATC	2 cut(s)	492, 619
BseAI	TCCGGA	1 cut(s)	1620
BseDI	CCNNGG	3 cut(s)	129, 438, 439
BseGI	GGATG	7 cut(s)	258, 319, 493, 841, 934, 1040, 1652
BseJI	GATNNNNATC	2 cut(s)	492, 619
BseLI	CCNNNNNNNGG	6 cut(s)	88, 275, 363, 1261, 1441, 1539
BseMII	CTCAG	3 cut(s)	86, 738, 879
BseNI	ACTGG	2 cut(s)	312, 357
BseRI	GAGGAG	5 cut(s)	197, 340, 343, 1457, 1674
BseSI	GKGCMC	2 cut(s)	356, 604
BseX3I	CGGCCG	1 cut(s)	135
BseXI	GCAGC	3 cut(s)	43, 184, 768
Bsh1236I	CGCG	2 cut(s)	131, 152
Bsh1285I	CGRYCG	1 cut(s)	138
BshFI	GGCC	4 cut(s)	62, 137, 257, 1532
BshNI	GGYRCC	2 cut(s)	145, 353
BsiEI	CGRYCG	1 cut(s)	138
BsiHKAI	GWGCWC	2 cut(s)	213, 392
BsiHKCI	CYCGRG	3 cut(s)	378, 439, 848
BsiSI	CCGG	4 cut(s)	86, 269, 440, 1621
BslFI	GGGAC	2 cut(s)	1141, 1445
BslI	CCNNNNNNNGG	6 cut(s)	88, 275, 363, 1261, 1441, 1539
BsmAI	GTCTC	1 cut(s)	1496
BsmFI	GGGAC	2 cut(s)	1141, 1445
BsnI	GGCC	4 cut(s)	62, 137, 257, 1532
Bso31I	GGTCTC	1 cut(s)	1496
BsoBI	CYCGRG	3 cut(s)	378, 439, 848
Bsp119I	TTCGAA	1 cut(s)	1333
Bsp1286I	GDGCHC	4 cut(s)	213, 356, 392, 604
Bsp13I	TCCGGA	1 cut(s)	1620
Bsp143I	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
BspANI	GGCC	4 cut(s)	62, 137, 257, 1532
BspCNI	CTCAG	3 cut(s)	87, 737, 880
BspEI	TCCGGA	1 cut(s)	1620
BspFNI	CGCG	2 cut(s)	131, 152
BspLI	GGNNCC	7 cut(s)	147, 355, 777, 1129, 1461, 1533, 1583
BspMAI	CTGCAG	1 cut(s)	397
BspMI	ACCTGC	1 cut(s)	386
BspPI	GGATC	3 cut(s)	926, 971, 1383
BspT104I	TTCGAA	1 cut(s)	1333
BspT107I	GGYRCC	2 cut(s)	145, 353
BspTNI	GGTCTC	1 cut(s)	1496
BsrBI	CCGCTC	1 cut(s)	159
BsrI	ACTGG	2 cut(s)	312, 357
BssECI	CCNNGG	3 cut(s)	129, 438, 439
BssMI	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
Bst4CI	ACNGT	4 cut(s)	737, 1023, 1405, 1415
Bst6I	CTCTTC	3 cut(s)	20, 806, 1521
BstBI	TTCGAA	1 cut(s)	1333
BstC8I	GCNNGC	1 cut(s)	446
BstDEI	CTNAG	5 cut(s)	95, 724, 888, 966, 1157
BstDSI	CCRYGG	1 cut(s)	129
BstF5I	GGATG	7 cut(s)	258, 319, 493, 841, 934, 1040, 1652
BstFNI	CGCG	2 cut(s)	131, 152
BstKTI	GATC	8 cut(s)	40, 169, 617, 697, 934, 979, 1378, 1399
BstMAI	GTCTC	1 cut(s)	1496
BstMBI	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
BstMCI	CGRYCG	1 cut(s)	138
BstMWI	GCNNNNNNNGC	2 cut(s)	128, 143
BstSCI	CCNGG	2 cut(s)	438, 439
BstSFI	CTRYAG	3 cut(s)	393, 1047, 1590
BstSLI	GKGCMC	2 cut(s)	356, 604
BstUI	CGCG	2 cut(s)	131, 152
BstV1I	GCAGC	3 cut(s)	43, 184, 768
BstV2I	GAAGAC	2 cut(s)	447, 1227
BstX2I	RGATCY	1 cut(s)	1396
BstYI	RGATCY	1 cut(s)	1396
BstZI	CGGCCG	1 cut(s)	135
BsuI	GTATCC	1 cut(s)	1262
BsuRI	GGCC	4 cut(s)	62, 137, 257, 1532
BtgI	CCRYGG	1 cut(s)	129
BtgZI	GCGATG	1 cut(s)	167
BtsCI	GGATG	7 cut(s)	258, 319, 493, 841, 934, 1040, 1652
BtsI	GCAGTG	2 cut(s)	550, 1583
BtsIMutI	CAGTG	2 cut(s)	550, 1583
BveI	ACCTGC	1 cut(s)	386
Cac8I	GCNNGC	1 cut(s)	446
Cfr13I	GGNCC	4 cut(s)	1128, 1277, 1459, 1531
Cfr42I	CCGCGG	1 cut(s)	132
Cfr9I	CCCGGG	1 cut(s)	439
Csp6I	GTAC	2 cut(s)	92, 1499
CviAII	CATG	2 cut(s)	856, 895
CviQI	GTAC	2 cut(s)	92, 1499
DdeI	CTNAG	5 cut(s)	95, 724, 888, 966, 1157
DpnI	GATC	8 cut(s)	39, 168, 616, 696, 933, 978, 1377, 1398
DpnII	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
DraI	TTTAAA	1 cut(s)	1353
DraIII	CACNNNGTG	1 cut(s)	969
EaeI	YGGCCR	2 cut(s)	60, 135
EagI	CGGCCG	1 cut(s)	135
Eam1104I	CTCTTC	3 cut(s)	20, 806, 1521
EarI	CTCTTC	3 cut(s)	20, 806, 1521
Ecl136II	GAGCTC	2 cut(s)	211, 390
EclXI	CGGCCG	1 cut(s)	135
Eco24I	GRGCYC	2 cut(s)	213, 392
Eco31I	GGTCTC	1 cut(s)	1496
Eco47I	GGWCC	3 cut(s)	1128, 1277, 1459
Eco52I	CGGCCG	1 cut(s)	135
Eco53kI	GAGCTC	2 cut(s)	211, 390
Eco57I	CTGAAG	2 cut(s)	320, 397
Eco88I	CYCGRG	3 cut(s)	378, 439, 848
EcoICRI	GAGCTC	2 cut(s)	211, 390
EcoO109I	RGGNCCY	1 cut(s)	1531
EcoRI	GAATTC	1 cut(s)	584
EcoT22I	ATGCAT	2 cut(s)	523, 1654
EcoT38I	GRGCYC	2 cut(s)	213, 392
FaeI	CATG	2 cut(s)	859, 898
FaqI	GGGAC	2 cut(s)	1141, 1445
FatI	CATG	2 cut(s)	855, 894
FauI	CCCGC	3 cut(s)	90, 157, 1470
Fnu4HI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 757
FokI	GGATG	7 cut(s)	265, 326, 500, 848, 941, 1027, 1639
FriOI	GRGCYC	2 cut(s)	213, 392
Fsp4HI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 757
FspBI	CTAG	6 cut(s)	449, 648, 753, 906, 1238, 1602
GluI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 757
GsuI	CTGGAG	1 cut(s)	329
HaeIII	GGCC	4 cut(s)	62, 137, 257, 1532
HapII	CCGG	4 cut(s)	86, 269, 440, 1621
Hin1II	CATG	2 cut(s)	859, 898
HindIII	AAGCTT	3 cut(s)	284, 1154, 1345
HinfI	GANTC	9 cut(s)	74, 452, 814, 902, 909, 1234, 1271, 1298, 1308
HpaII	CCGG	4 cut(s)	86, 269, 440, 1621
HphI	GGTGA	3 cut(s)	426, 704, 749
Hpy99I	CGWCG	2 cut(s)	143, 388
HpyAV	CCTTC	6 cut(s)	209, 645, 1155, 1165, 1186, 1566
HpyCH4III	ACNGT	4 cut(s)	737, 1023, 1405, 1415
HpyCH4IV	ACGT	2 cut(s)	340, 1224
HpyCH4V	TGCA	6 cut(s)	395, 521, 555, 592, 764, 1652
HpyF10VI	GCNNNNNNNGC	2 cut(s)	128, 143
HpyF3I	CTNAG	5 cut(s)	95, 724, 888, 966, 1157
HpySE526I	ACGT	2 cut(s)	340, 1224
Hsp92II	CATG	2 cut(s)	859, 898
Kpn2I	TCCGGA	1 cut(s)	1620
KspI	CCGCGG	1 cut(s)	132
Kzo9I	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
LmnI	GCTCC	2 cut(s)	184, 218
Lsp1109I	GCAGC	3 cut(s)	43, 184, 768
LweI	GCATC	4 cut(s)	1049, 1099, 1661, 1684
MaeI	CTAG	6 cut(s)	449, 648, 753, 906, 1238, 1602
MaeII	ACGT	2 cut(s)	340, 1224
MaeIII	GTNAC	3 cut(s)	548, 731, 1626
MalI	GATC	8 cut(s)	39, 168, 616, 696, 933, 978, 1377, 1398
MbiI	CCGCTC	1 cut(s)	159
MboI	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
MflI	RGATCY	1 cut(s)	1396
MhlI	GDGCHC	4 cut(s)	213, 356, 392, 604
MluCI	AATT	9 cut(s)	241, 467, 584, 882, 948, 1009, 1326, 1335, 1640
MlyI	GAGTC	6 cut(s)	461, 823, 896, 1243, 1292, 1302
MmeI	TCCRAC	3 cut(s)	465, 1397, 1609
Mph1103I	ATGCAT	2 cut(s)	523, 1654
MroI	TCCGGA	1 cut(s)	1620
MroXI	GAANNNNTTC	4 cut(s)	285, 882, 1224, 1641
MseI	TTAA	6 cut(s)	48, 225, 462, 1215, 1341, 1352
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	4 cut(s)	86, 269, 440, 1621
MspR9I	CCNGG	2 cut(s)	440, 441
MvnI	CGCG	2 cut(s)	131, 152
MwoI	GCNNNNNNNGC	2 cut(s)	128, 143
NciI	CCSGG	2 cut(s)	440, 441
NdeII	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
NlaIII	CATG	2 cut(s)	859, 898
NlaIV	GGNNCC	7 cut(s)	147, 355, 777, 1129, 1461, 1533, 1583
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	2 cut(s)	548, 731
NsiI	ATGCAT	2 cut(s)	523, 1654
NspV	TTCGAA	1 cut(s)	1333
PaqCI	CACCTGC	1 cut(s)	386
PdmI	GAANNNNTTC	4 cut(s)	285, 882, 1224, 1641
PfeI	GAWTC	3 cut(s)	74, 909, 1271
PkrI	GCNGC	8 cut(s)	33, 133, 136, 161, 164, 174, 231, 758
PleI	GAGTC	6 cut(s)	460, 822, 896, 1242, 1292, 1302
PpsI	GAGTC	6 cut(s)	460, 822, 896, 1242, 1292, 1302
Psp124BI	GAGCTC	2 cut(s)	213, 392
Psp1406I	AACGTT	1 cut(s)	340
PspN4I	GGNNCC	7 cut(s)	147, 355, 777, 1129, 1461, 1533, 1583
PspPI	GGNCC	4 cut(s)	1128, 1277, 1459, 1531
PstI	CTGCAG	1 cut(s)	397
PsuI	RGATCY	1 cut(s)	1396
RsaI	GTAC	2 cut(s)	93, 1500
RsaNI	GTAC	2 cut(s)	92, 1499
SacI	GAGCTC	2 cut(s)	213, 392
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	6 cut(s)	48, 225, 462, 1215, 1341, 1352
SatI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 757
Sau3AI	GATC	8 cut(s)	37, 166, 614, 694, 931, 976, 1375, 1396
Sau96I	GGNCC	4 cut(s)	1128, 1277, 1459, 1531
SchI	GAGTC	6 cut(s)	461, 823, 896, 1243, 1292, 1302
ScrFI	CCNGG	2 cut(s)	440, 441
SduI	GDGCHC	4 cut(s)	213, 356, 392, 604
SfaNI	GCATC	4 cut(s)	1049, 1099, 1661, 1684
SfcI	CTRYAG	3 cut(s)	393, 1047, 1590
Sfr303I	CCGCGG	1 cut(s)	132
SfuI	TTCGAA	1 cut(s)	1333
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	3 cut(s)	1128, 1277, 1459
SmaI	CCCGGG	1 cut(s)	441
SmlI	CTYRAG	2 cut(s)	188, 1631
SmoI	CTYRAG	2 cut(s)	188, 1631
Sse9I	AATT	9 cut(s)	241, 467, 584, 882, 948, 1009, 1326, 1335, 1640
SspMI	CTAG	6 cut(s)	449, 648, 753, 906, 1238, 1602
SstI	GAGCTC	2 cut(s)	213, 392
StyD4I	CCNGG	2 cut(s)	438, 439
TaaI	ACNGT	4 cut(s)	737, 1023, 1405, 1415
TaiI	ACGT	2 cut(s)	343, 1227
TaqI	TCGA	4 cut(s)	213, 613, 661, 1333
TasI	AATT	9 cut(s)	241, 467, 584, 882, 948, 1009, 1326, 1335, 1640
TatI	WGTACW	1 cut(s)	1498
TauI	GCSGC	5 cut(s)	134, 137, 162, 165, 232
TfiI	GAWTC	3 cut(s)	74, 909, 1271
Tru1I	TTAA	6 cut(s)	48, 225, 462, 1215, 1341, 1352
Tru9I	TTAA	6 cut(s)	48, 225, 462, 1215, 1341, 1352
TscAI	CASTG	2 cut(s)	557, 1583
TseFI	GTSAC	2 cut(s)	548, 731
TseI	GCWGC	3 cut(s)	31, 172, 756
Tsp45I	GTSAC	2 cut(s)	548, 731
TspMI	CCCGGG	1 cut(s)	439
TspRI	CASTG	2 cut(s)	557, 1583
VpaK11BI	GGWCC	3 cut(s)	1128, 1277, 1459
XapI	RAATTY	7 cut(s)	241, 467, 584, 882, 948, 1009, 1640
XbaI	TCTAGA	1 cut(s)	905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	829
XmaI	CCCGGG	1 cut(s)	439
XmnI	GAANNNNTTC	4 cut(s)	285, 882, 1224, 1641
XspI	CTAG	6 cut(s)	449, 648, 753, 906, 1238, 1602
Zsp2I	ATGCAT	2 cut(s)	523, 1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.