Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004755

Physical Location & Seq

Genomic Coordinates Reverse (-)

61962668 .. 61967659

Gene Structure 4992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G035130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGAAGGAGAGAGAGCCGAGAAGAAGAGGCAGCTTGATCTTGACTTTGACAAACTTTTGGGCGACAATGACGATTCTGACCCGCCGGAGGTACTGAGAGTGAAGAAGCCCAAAGCCGTAGCCACCACCGCGGCGGCCGACGAGCCACCGGCGATGAGCGGCGGCGATGAGGAGCTTGAGAAGATGAACAATACCGACCTCGAAGGAGCGATTAAGCGGCAAGTAGAAAATTTGAAGCGGATGGGCTCTATATTGCCGGACAAAGGCGAAAAGCTTCGGATTTGTCTGAAGAAACTGGAGGATGAACAGGGGAGGAGGAGGCTTGAACGCTCCGAGAGGGGCACCAGTAAGGGGGAGAAGCCCACCCGAGCGACCAGCTCTGCAGGTGTTTCTAATGGCTTCAGAGATAAGGAGGCTACATCACCCCCGAGCGAGCTACAGTCTTCATTTAATAAATTCCTTTCTAAAAAGTTGGATGACAATAAAGATTGTAGCAAGGGCAATGCATTTGAAAGAGAGTTATCAACTTTGGGTCACTGCAACCGCCAGAAAAGGAACAATAATGGAGAATTCTTGCAAAAGGGGGCACAGAAAGGTCGATCTTCATCAAGACATTTCCCTTCTCAAAGCCCTAGCAATTTTTATCGTGATAAAGATAAAAGTTTTCTCTCAAATGGTGATCGTAAAGGCAGAGCTTCTTCCAATAACTCAGGTCGTCACGGTGAGGAAAACTTCTCTAGCAGCATTGCAAAAAGGGAGGAACCATATCAACTTCGGAATAGGGATAGGAATAGGAAGAGTCAGACCATTTTACTTGTGGATGAGGAGGAACCCGAGTTCATGGACACCACAGAGCAAATAGAAGAAATTCCTGAGAGCATGAAAGACTCTAGAATCTACTATCCATCAAGGGATGATCCACATTCTGTTGAAATTTGTTATACAGACACTAAGTGCCTTGATCCTCAAAGCTACTTGACATCAGCTATTATGAATTTCTACATACGGTATTTACATCAACAAGCATCCCCTACAGACAGGGGAATATGTGCGTTTCATTTCTTCAATACCTTTTTTTACAATAAGCTCAAAGATGCTGTATCAGAAAAGGGGACCAACAAGGATAACCTTTTTGTCAAGCTTAGAAGATGGTGGAAGGGTGTTGATATATTTCAGAAGGCTTACATACTTATTCCTATTAATGAAGACGTTCATTGGAGTCTAGTCATTATCTGTATCCCTGACAAGGAAGAAGAATCAGGACCACTTGTTCTTCATTTAGACTCATTAGGACTCCATTGTAGCAAATCAATTTTTCAAATTATTAAAAGCTTTTTAAAAGAAGAATGGTGCTATCTGGATCAAGAAGATGATATTTCAGATCTAACAGTTTCAGACTGTTGGAAACGACTTCCTGACCATATTGAGGAGAAAAAACTTGTGGTCCCGCAACAGAAAAATGACTATGATTGTGGTCTCTTTGTACTCTTGTTTATGGAACGCTTTATAGAAGAGGCCCCTAAAAGGCTGAAAAAGAAAGATTTGGCAAGGTTTGGAAGGCAGTGGTTCCAACCTGTAGAGGCTTCTAGGTTGAGAAGTAAAATCCGGAAGTTACTCAAGGAAGAATTTCAAAATGCATCCAAGTCAAACTGCTCTAAAGAATCTTCTCCTCTTTCTGATGCTTCTGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009628 GO:0009651 GO:0009791 GO:0009987 GO:0010228 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

564

Amino Acids

64.98

Weight (kDa)

6.83

Isoelectric Point (pI)

56.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	325 - 526	7.6e-41	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10570 AT1G10570 AT1G10570 AT1G60220
fragaria_vesca	FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560
malus_domestica	MD13G1091500.v1.1
prunus_persica	Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1
pyrus_communis	pycom13g07950
rosa_chinensis	RchiOBHm_Chr3g0455541 RchiOBHm_Chr4g0443941
rosa_laevigata	RLG00000005875
rosa_multiflora	Rmu_sc0011390.1_g000004
rosa_roxburghii	Rroxscaffold_5G00384480
rosa_rugosa	Rorug03G0008300 Rorug04G0348400 Rorug04G0348500
rosa_samantha	Rh4AG409000 Rh4BG420100 Rh4CG434100 Rh4DG415100
rosa_wichuraiana	Rw3G005410 Rw4G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	374
Acc36I	ACCTGC	1 cut(s)	374
AccB1I	GGYRCC	1 cut(s)	341
AccBSI	CCGCTC	1 cut(s)	159
AccII	CGCG	1 cut(s)	131
AccIII	TCCGGA	1 cut(s)	1605
AclWI	GGATC	3 cut(s)	911, 956, 1368
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	7 cut(s)	229, 455, 569, 867, 933, 994, 1625
AcuI	CTGAAG	2 cut(s)	308, 385
AdeI	CACNNNGTG	1 cut(s)	954
AfaI	GTAC	2 cut(s)	93, 1485
AfiI	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
AgsI	TTSAA	7 cut(s)	235, 326, 512, 932, 1066, 1319, 1631
AloI	GAACNNNNNNTCC	4 cut(s)	821, 853, 1254, 1286
Alw26I	GTCTC	1 cut(s)	1481
AlwI	GGATC	3 cut(s)	911, 956, 1368
Ama87I	CYCGRG	3 cut(s)	366, 427, 833
Aor13HI	TCCGGA	1 cut(s)	1605
AoxI	GGCC	2 cut(s)	135, 1515
ApeKI	GCWGC	2 cut(s)	31, 741
ApoI	RAATTY	7 cut(s)	229, 455, 569, 867, 933, 994, 1625
AseI	ATTAAT	1 cut(s)	1200
Asp700I	GAANNNNTTC	4 cut(s)	273, 867, 1209, 1626
AspS9I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
AsuHPI	GGTGA	3 cut(s)	414, 689, 734
AvaI	CYCGRG	3 cut(s)	366, 427, 833
AvaII	GGWCC	3 cut(s)	1113, 1262, 1444
BaeGI	GKGCMC	2 cut(s)	344, 589
BanI	GGYRCC	1 cut(s)	341
BanII	GRGCYC	1 cut(s)	248
BbsI	GAAGAC	2 cut(s)	435, 1212
BbvI	GCAGC	2 cut(s)	43, 753
BccI	CCATC	3 cut(s)	235, 913, 1143
BceAI	ACGGC	1 cut(s)	101
BciVI	GTATCC	1 cut(s)	1247
BcoDI	GTCTC	1 cut(s)	1481
BfaI	CTAG	5 cut(s)	633, 738, 891, 1223, 1587
BfmI	CTRYAG	4 cut(s)	381, 437, 1032, 1575
BfuAI	ACCTGC	1 cut(s)	374
BfuI	GTATCC	1 cut(s)	1247
BglII	AGATCT	1 cut(s)	1381
BisI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
BlsI	GCNGC	7 cut(s)	33, 133, 136, 161, 164, 219, 743
Bme18I	GGWCC	3 cut(s)	1113, 1262, 1444
BmeT110I	CYCGRG	3 cut(s)	366, 427, 833
BmgT120I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
BmiI	GGNNCC	7 cut(s)	343, 762, 831, 1114, 1446, 1518, 1568
BmsI	GCATC	4 cut(s)	1034, 1084, 1646, 1669
BpiI	GAAGAC	2 cut(s)	435, 1212
BpmI	CTGGAG	1 cut(s)	317
BpuEI	CTTGAG	2 cut(s)	197, 1601
BsaBI	GATNNNNATC	1 cut(s)	604
BsaI	GGTCTC	1 cut(s)	1481
BsaJI	CCNNGG	1 cut(s)	129
BsaWI	WCCGGW	1 cut(s)	1605
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
Bse118I	RCCGGY	1 cut(s)	148
Bse1I	ACTGG	2 cut(s)	300, 345
Bse3DI	GCAATG	2 cut(s)	508, 744
Bse8I	GATNNNNATC	1 cut(s)	604
BseAI	TCCGGA	1 cut(s)	1605
BseDI	CCNNGG	1 cut(s)	129
BseGI	GGATG	7 cut(s)	246, 307, 481, 826, 919, 1025, 1637
BseJI	GATNNNNATC	1 cut(s)	604
BseLI	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
BseMI	GCAATG	2 cut(s)	508, 744
BseMII	CTCAG	3 cut(s)	86, 723, 864
BseNI	ACTGG	2 cut(s)	300, 345
BseRI	GAGGAG	6 cut(s)	185, 328, 331, 839, 1442, 1659
BseSI	GKGCMC	2 cut(s)	344, 589
BseX3I	CGGCCG	1 cut(s)	135
BseXI	GCAGC	2 cut(s)	43, 753
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	1 cut(s)	138
BshFI	GGCC	2 cut(s)	137, 1517
BshNI	GGYRCC	1 cut(s)	341
BsiEI	CGRYCG	1 cut(s)	138
BsiHKCI	CYCGRG	3 cut(s)	366, 427, 833
BsiSI	CCGG	4 cut(s)	86, 149, 257, 1606
BslFI	GGGAC	2 cut(s)	1126, 1430
BslI	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
BsmAI	GTCTC	1 cut(s)	1481
BsmFI	GGGAC	2 cut(s)	1126, 1430
BsnI	GGCC	2 cut(s)	137, 1517
Bso31I	GGTCTC	1 cut(s)	1481
BsoBI	CYCGRG	3 cut(s)	366, 427, 833
Bsp1286I	GDGCHC	3 cut(s)	248, 344, 589
Bsp13I	TCCGGA	1 cut(s)	1605
Bsp143I	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
BspANI	GGCC	2 cut(s)	137, 1517
BspCNI	CTCAG	3 cut(s)	87, 722, 865
BspEI	TCCGGA	1 cut(s)	1605
BspFNI	CGCG	1 cut(s)	131
BspLI	GGNNCC	7 cut(s)	343, 762, 831, 1114, 1446, 1518, 1568
BspMAI	CTGCAG	1 cut(s)	385
BspMI	ACCTGC	1 cut(s)	374
BspPI	GGATC	3 cut(s)	911, 956, 1368
BspT107I	GGYRCC	1 cut(s)	341
BspTNI	GGTCTC	1 cut(s)	1481
BsrBI	CCGCTC	1 cut(s)	159
BsrDI	GCAATG	2 cut(s)	508, 744
BsrFI	RCCGGY	1 cut(s)	148
BsrI	ACTGG	2 cut(s)	300, 345
BssAI	RCCGGY	1 cut(s)	148
BssECI	CCNNGG	1 cut(s)	129
BssMI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
Bst4CI	ACNGT	5 cut(s)	441, 722, 1008, 1390, 1400
Bst6I	CTCTTC	3 cut(s)	20, 791, 1506
BstC8I	GCNNGC	1 cut(s)	434
BstDEI	CTNAG	5 cut(s)	95, 709, 873, 951, 1142
BstDSI	CCRYGG	1 cut(s)	129
BstF5I	GGATG	7 cut(s)	246, 307, 481, 826, 919, 1025, 1637
BstFNI	CGCG	1 cut(s)	131
BstKTI	GATC	7 cut(s)	40, 602, 682, 919, 964, 1363, 1384
BstMAI	GTCTC	1 cut(s)	1481
BstMBI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
BstMCI	CGRYCG	1 cut(s)	138
BstMWI	GCNNNNNNNGC	1 cut(s)	128
BstSFI	CTRYAG	4 cut(s)	381, 437, 1032, 1575
BstSLI	GKGCMC	2 cut(s)	344, 589
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	2 cut(s)	43, 753
BstV2I	GAAGAC	2 cut(s)	435, 1212
BstX2I	RGATCY	1 cut(s)	1381
BstYI	RGATCY	1 cut(s)	1381
BstZI	CGGCCG	1 cut(s)	135
BsuI	GTATCC	1 cut(s)	1247
BsuRI	GGCC	2 cut(s)	137, 1517
BtgI	CCRYGG	1 cut(s)	129
BtgZI	GCGATG	2 cut(s)	167, 180
BtsCI	GGATG	7 cut(s)	246, 307, 481, 826, 919, 1025, 1637
BtsI	GCAGTG	2 cut(s)	535, 1568
BtsIMutI	CAGTG	2 cut(s)	535, 1568
BveI	ACCTGC	1 cut(s)	374
Cac8I	GCNNGC	1 cut(s)	434
Cfr10I	RCCGGY	1 cut(s)	148
Cfr13I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
Cfr42I	CCGCGG	1 cut(s)	132
Csp6I	GTAC	2 cut(s)	92, 1484
CviAII	CATG	2 cut(s)	841, 880
CviQI	GTAC	2 cut(s)	92, 1484
DdeI	CTNAG	5 cut(s)	95, 709, 873, 951, 1142
DpnI	GATC	7 cut(s)	39, 601, 681, 918, 963, 1362, 1383
DpnII	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
DraI	TTTAAA	1 cut(s)	1338
DraIII	CACNNNGTG	1 cut(s)	954
EaeI	YGGCCR	1 cut(s)	135
EagI	CGGCCG	1 cut(s)	135
Eam1104I	CTCTTC	3 cut(s)	20, 791, 1506
EarI	CTCTTC	3 cut(s)	20, 791, 1506
EclXI	CGGCCG	1 cut(s)	135
Eco24I	GRGCYC	1 cut(s)	248
Eco31I	GGTCTC	1 cut(s)	1481
Eco47I	GGWCC	3 cut(s)	1113, 1262, 1444
Eco52I	CGGCCG	1 cut(s)	135
Eco57I	CTGAAG	2 cut(s)	308, 385
Eco88I	CYCGRG	3 cut(s)	366, 427, 833
EcoO109I	RGGNCCY	1 cut(s)	1516
EcoRI	GAATTC	1 cut(s)	569
EcoT22I	ATGCAT	2 cut(s)	508, 1639
EcoT38I	GRGCYC	1 cut(s)	248
FaeI	CATG	2 cut(s)	844, 883
FaqI	GGGAC	2 cut(s)	1126, 1430
FatI	CATG	2 cut(s)	840, 879
FauI	CCCGC	2 cut(s)	90, 1455
Fnu4HI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
FokI	GGATG	7 cut(s)	253, 314, 488, 833, 926, 1012, 1624
FriOI	GRGCYC	1 cut(s)	248
Fsp4HI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
FspBI	CTAG	5 cut(s)	633, 738, 891, 1223, 1587
GluI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
GsuI	CTGGAG	1 cut(s)	317
HaeIII	GGCC	2 cut(s)	137, 1517
HapII	CCGG	4 cut(s)	86, 149, 257, 1606
Hin1II	CATG	2 cut(s)	844, 883
HindIII	AAGCTT	3 cut(s)	272, 1139, 1330
HinfI	GANTC	9 cut(s)	74, 799, 887, 894, 1219, 1256, 1283, 1293, 1661
HpaII	CCGG	4 cut(s)	86, 149, 257, 1606
HphI	GGTGA	3 cut(s)	414, 689, 734
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	5 cut(s)	197, 630, 1150, 1171, 1551
HpyCH4III	ACNGT	5 cut(s)	441, 722, 1008, 1390, 1400
HpyCH4IV	ACGT	1 cut(s)	1209
HpyCH4V	TGCA	6 cut(s)	383, 506, 540, 577, 749, 1637
HpyF10VI	GCNNNNNNNGC	1 cut(s)	128
HpyF3I	CTNAG	5 cut(s)	95, 709, 873, 951, 1142
HpySE526I	ACGT	1 cut(s)	1209
Hsp92II	CATG	2 cut(s)	844, 883
Kpn2I	TCCGGA	1 cut(s)	1605
KspI	CCGCGG	1 cut(s)	132
Kzo9I	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
LmnI	GCTCC	3 cut(s)	172, 206, 335
Lsp1109I	GCAGC	2 cut(s)	43, 753
LweI	GCATC	4 cut(s)	1034, 1084, 1646, 1669
MaeI	CTAG	5 cut(s)	633, 738, 891, 1223, 1587
MaeII	ACGT	1 cut(s)	1209
MaeIII	GTNAC	3 cut(s)	533, 716, 1611
MalI	GATC	7 cut(s)	39, 601, 681, 918, 963, 1362, 1383
MbiI	CCGCTC	1 cut(s)	159
MboI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
MflI	RGATCY	1 cut(s)	1381
MhlI	GDGCHC	3 cut(s)	248, 344, 589
MlyI	GAGTC	5 cut(s)	808, 881, 1228, 1277, 1287
MmeI	TCCRAC	3 cut(s)	453, 1382, 1594
Mph1103I	ATGCAT	2 cut(s)	508, 1639
MroI	TCCGGA	1 cut(s)	1605
MroXI	GAANNNNTTC	4 cut(s)	273, 867, 1209, 1626
MseI	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	4 cut(s)	86, 149, 257, 1606
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	1 cut(s)	128
NdeII	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
NlaIII	CATG	2 cut(s)	844, 883
NlaIV	GGNNCC	7 cut(s)	343, 762, 831, 1114, 1446, 1518, 1568
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	2 cut(s)	533, 716
NsiI	ATGCAT	2 cut(s)	508, 1639
PaqCI	CACCTGC	1 cut(s)	374
PdmI	GAANNNNTTC	4 cut(s)	273, 867, 1209, 1626
PfeI	GAWTC	4 cut(s)	74, 894, 1256, 1661
PkrI	GCNGC	7 cut(s)	33, 133, 136, 161, 164, 219, 743
PleI	GAGTC	5 cut(s)	807, 881, 1227, 1277, 1287
PpsI	GAGTC	5 cut(s)	807, 881, 1227, 1277, 1287
PshBI	ATTAAT	1 cut(s)	1200
PspN4I	GGNNCC	7 cut(s)	343, 762, 831, 1114, 1446, 1518, 1568
PspPI	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
PstI	CTGCAG	1 cut(s)	385
PsuI	RGATCY	1 cut(s)	1381
RsaI	GTAC	2 cut(s)	93, 1485
RsaNI	GTAC	2 cut(s)	92, 1484
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
SatI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
Sau3AI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
Sau96I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
SchI	GAGTC	5 cut(s)	808, 881, 1228, 1277, 1287
SduI	GDGCHC	3 cut(s)	248, 344, 589
SfaNI	GCATC	4 cut(s)	1034, 1084, 1646, 1669
SfcI	CTRYAG	4 cut(s)	381, 437, 1032, 1575
Sfr303I	CCGCGG	1 cut(s)	132
SgrAI	CRCCGGYG	1 cut(s)	148
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	3 cut(s)	1113, 1262, 1444
SmlI	CTYRAG	2 cut(s)	176, 1616
SmoI	CTYRAG	2 cut(s)	176, 1616
SspMI	CTAG	5 cut(s)	633, 738, 891, 1223, 1587
TaaI	ACNGT	5 cut(s)	441, 722, 1008, 1390, 1400
TaiI	ACGT	1 cut(s)	1212
TaqI	TCGA	2 cut(s)	201, 598
TatI	WGTACW	1 cut(s)	1483
TauI	GCSGC	5 cut(s)	134, 137, 162, 165, 220
TfiI	GAWTC	4 cut(s)	74, 894, 1256, 1661
Tru1I	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
Tru9I	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
TscAI	CASTG	2 cut(s)	542, 1568
TseFI	GTSAC	2 cut(s)	533, 716
TseI	GCWGC	2 cut(s)	31, 741
Tsp45I	GTSAC	2 cut(s)	533, 716
TspRI	CASTG	2 cut(s)	542, 1568
VpaK11BI	GGWCC	3 cut(s)	1113, 1262, 1444
VspI	ATTAAT	1 cut(s)	1200
XapI	RAATTY	7 cut(s)	229, 455, 569, 867, 933, 994, 1625
XbaI	TCTAGA	1 cut(s)	890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	814
XmnI	GAANNNNTTC	4 cut(s)	273, 867, 1209, 1626
XspI	CTAG	5 cut(s)	633, 738, 891, 1223, 1587
Zsp2I	ATGCAT	2 cut(s)	508, 1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.