Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004755

Physical Location & Seq

Genomic Coordinates Reverse (-)

67324367 .. 67330015

Gene Structure 5649 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG434100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGAAGGAGAGAGAGCCGAGAAAAAGAGGCAGCTTGATCTTGACTATGACAAACTTTTGGGCGACAATGACGATTCTGACCCGCCGGAGGTACTGAGAGTGAAGAAGCCCAAAGCCATAGCCACCACCGCGGCGGCCGACGAGCCACCGGCGATGAGCGGCGGCGATGAGGAGCTTGAGAAGATGAACAATACCGAGCTCGAAGGAGCGATTAAGCGGCAAGTAGAAAATTTGAAGCGGATGGGCTCTATACTGCCGGACAAAGGCGAAAAGCTTCGGATTTGTCTGAAGAAACTGGAGGATGAACAGGGGAGGAGGAGGCTTGAACGCTCCGAGAGGGGCACCAGTAAGGGGGAGAAGCCTACCCGAGCGACCAGCTCTGCAGGTGTTTCTAATGGCTTCAGAGATAAGGAGGCTACATCACCCCCGACCGAGCTACAGTCTTCATTTAATAAATTCTTTTCTAAAAAGTTGGATGACAATAAAGATTGTAGCAAGGGCAATGCATTTGAAAGAGAGTTATCAACTTTGGGTCACTGCAACCGCCAGAAAAGGAACAATAATGGAGAATTCTTGCAAAAGGGGGCACAGAAAGGTCGATCTTCATCAAGACATTTCTCTTCTCAAAGCCCTAGCAACTTTTATCGTGATAAAGATAAAAGTTTTCTCTCAAATGGTGATCGTAAAGGCAGAGCTTCTTCCAATAACTCAGGTCGTCACGGTGAGGAAAACTTCTCTAGCAGCATTTCAAAAAGGGAGGAACCATATCAACTTCGGAATAGGGATAGGAATAGGAAGAGTCAGACCATTTTACTTGTGGATGAGGAGGAACCCGAGTTCATGGACACCACAGAGCAAATAGAAGAAATTCCTGAGAGCATGAAAGACTCTAGAATCTACTATCCATCAAGGGATGATCCACATTCTGTTGAAATTTGTTATACAGACACTAAGTGCCTTGATCCTCAAAGCTACTTGACATCAGCTATTATGAATTTCTACATACGGTATTTACATCAACAAGCATCCCCTACAGACAGGGGAATATGTGCGTTTCATTTCTTCAATACCTTTTTTTACAATAAGCTCAAAGATGCTGTATCAGAAAAGGGGACCAACAAGGATAACCTTTTTGTCAAGCTTAGAAGGTGGTGGAAGGGTGTTGATATATTTCAGAAGGCTTACATACTTATTCCTATTAATGAAGACGTTCATTGGAGTCTAGTCATTATCTGTATCCCTGACAAGGAAGAAGAATCAGGACCACTTGTTCTTCATTTAGACTCATTAGGACTCCATTGTAGCAAATCAATTTTTCGAATTATTAAAAGCTTTTTAAAAGAAGAATGGTGCTTTCTGGATCAAGAAGCTGATATTTCAGATCTAACAGTTTCAGACTGTTGGAAACGACTTCCTGACCATATTGAGGAGAAAAAACTTGTGGTCCCGCAACAGAAAAATGACTATGATTGTGGTCTCTTTGTACTCTTGTTTATGGAACGCTTTATAGAAGAGGCCCCTAAAAGGCTGAAAAAGAAAGATTTAGCAAGGGTACACTATTTTGTTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009628 GO:0009651 GO:0009791 GO:0009987 GO:0010228 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

523

Amino Acids

60.41

Weight (kDa)

6.86

Isoelectric Point (pI)

55.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	325 - 518	1.2e-38	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10570 AT1G10570 AT1G10570 AT1G60220
fragaria_vesca	FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560
malus_domestica	MD13G1091500.v1.1
prunus_persica	Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1
pyrus_communis	pycom13g07950
rosa_chinensis	RchiOBHm_Chr3g0455541 RchiOBHm_Chr4g0443941
rosa_laevigata	RLG00000005875
rosa_multiflora	Rmu_sc0011390.1_g000004
rosa_roxburghii	Rroxscaffold_5G00384480
rosa_rugosa	Rorug03G0008300 Rorug04G0348400 Rorug04G0348500
rosa_samantha	Rh4AG409000 Rh4BG420100 Rh4CG434100 Rh4DG415100
rosa_wichuraiana	Rw3G005410 Rw4G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	374
Acc36I	ACCTGC	1 cut(s)	374
AccB1I	GGYRCC	1 cut(s)	341
AccBSI	CCGCTC	1 cut(s)	159
AccII	CGCG	1 cut(s)	131
AclWI	GGATC	3 cut(s)	911, 956, 1368
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	6 cut(s)	229, 455, 569, 867, 933, 994
AcuI	CTGAAG	2 cut(s)	308, 385
AdeI	CACNNNGTG	1 cut(s)	954
AfaI	GTAC	3 cut(s)	93, 1485, 1554
AfiI	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
AgsI	TTSAA	6 cut(s)	235, 326, 512, 750, 932, 1066
AloI	GAACNNNNNNTCC	4 cut(s)	821, 853, 1254, 1286
Alw21I	GWGCWC	1 cut(s)	201
Alw26I	GTCTC	1 cut(s)	1481
AlwI	GGATC	3 cut(s)	911, 956, 1368
Ama87I	CYCGRG	2 cut(s)	366, 833
AoxI	GGCC	2 cut(s)	135, 1515
ApeKI	GCWGC	2 cut(s)	31, 741
ApoI	RAATTY	6 cut(s)	229, 455, 569, 867, 933, 994
AseI	ATTAAT	1 cut(s)	1200
Asp700I	GAANNNNTTC	3 cut(s)	273, 867, 1209
AspS9I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
AsuHPI	GGTGA	3 cut(s)	414, 689, 734
AsuII	TTCGAA	1 cut(s)	1318
AvaI	CYCGRG	2 cut(s)	366, 833
AvaII	GGWCC	3 cut(s)	1113, 1262, 1444
BaeGI	GKGCMC	2 cut(s)	344, 589
BanI	GGYRCC	1 cut(s)	341
BanII	GRGCYC	2 cut(s)	201, 248
BbsI	GAAGAC	2 cut(s)	435, 1212
Bbv12I	GWGCWC	1 cut(s)	201
BbvI	GCAGC	2 cut(s)	43, 753
BccI	CCATC	2 cut(s)	235, 913
BciVI	GTATCC	1 cut(s)	1247
BcoDI	GTCTC	1 cut(s)	1481
BfaI	CTAG	4 cut(s)	633, 738, 891, 1223
BfmI	CTRYAG	3 cut(s)	381, 437, 1032
BfuAI	ACCTGC	1 cut(s)	374
BfuI	GTATCC	1 cut(s)	1247
BglII	AGATCT	1 cut(s)	1381
BisI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
BlsI	GCNGC	7 cut(s)	33, 133, 136, 161, 164, 219, 743
Bme18I	GGWCC	3 cut(s)	1113, 1262, 1444
BmeT110I	CYCGRG	2 cut(s)	366, 833
BmgT120I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
BmiI	GGNNCC	6 cut(s)	343, 762, 831, 1114, 1446, 1518
BmsI	GCATC	2 cut(s)	1034, 1084
BpiI	GAAGAC	2 cut(s)	435, 1212
BpmI	CTGGAG	1 cut(s)	317
Bpu14I	TTCGAA	1 cut(s)	1318
BpuEI	CTTGAG	1 cut(s)	197
BsaBI	GATNNNNATC	1 cut(s)	604
BsaI	GGTCTC	1 cut(s)	1481
BsaJI	CCNNGG	1 cut(s)	129
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
Bse118I	RCCGGY	1 cut(s)	148
Bse1I	ACTGG	2 cut(s)	300, 345
Bse3DI	GCAATG	1 cut(s)	508
Bse8I	GATNNNNATC	1 cut(s)	604
BseDI	CCNNGG	1 cut(s)	129
BseGI	GGATG	6 cut(s)	246, 307, 481, 826, 919, 1025
BseJI	GATNNNNATC	1 cut(s)	604
BseLI	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
BseMI	GCAATG	1 cut(s)	508
BseMII	CTCAG	3 cut(s)	86, 723, 864
BseNI	ACTGG	2 cut(s)	300, 345
BseRI	GAGGAG	5 cut(s)	185, 328, 331, 839, 1442
BseSI	GKGCMC	2 cut(s)	344, 589
BseX3I	CGGCCG	1 cut(s)	135
BseXI	GCAGC	2 cut(s)	43, 753
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	2 cut(s)	138, 432
BshFI	GGCC	2 cut(s)	137, 1517
BshNI	GGYRCC	1 cut(s)	341
BsiEI	CGRYCG	2 cut(s)	138, 432
BsiHKAI	GWGCWC	1 cut(s)	201
BsiHKCI	CYCGRG	2 cut(s)	366, 833
BsiSI	CCGG	3 cut(s)	86, 149, 257
BslFI	GGGAC	2 cut(s)	1126, 1430
BslI	CCNNNNNNNGG	6 cut(s)	88, 263, 351, 1246, 1426, 1524
BsmAI	GTCTC	1 cut(s)	1481
BsmFI	GGGAC	2 cut(s)	1126, 1430
BsnI	GGCC	2 cut(s)	137, 1517
Bso31I	GGTCTC	1 cut(s)	1481
BsoBI	CYCGRG	2 cut(s)	366, 833
Bsp119I	TTCGAA	1 cut(s)	1318
Bsp1286I	GDGCHC	4 cut(s)	201, 248, 344, 589
Bsp143I	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
BspANI	GGCC	2 cut(s)	137, 1517
BspCNI	CTCAG	3 cut(s)	87, 722, 865
BspFNI	CGCG	1 cut(s)	131
BspLI	GGNNCC	6 cut(s)	343, 762, 831, 1114, 1446, 1518
BspMAI	CTGCAG	1 cut(s)	385
BspMI	ACCTGC	1 cut(s)	374
BspPI	GGATC	3 cut(s)	911, 956, 1368
BspT104I	TTCGAA	1 cut(s)	1318
BspT107I	GGYRCC	1 cut(s)	341
BspTNI	GGTCTC	1 cut(s)	1481
BsrBI	CCGCTC	1 cut(s)	159
BsrDI	GCAATG	1 cut(s)	508
BsrFI	RCCGGY	1 cut(s)	148
BsrI	ACTGG	2 cut(s)	300, 345
BssAI	RCCGGY	1 cut(s)	148
BssECI	CCNNGG	1 cut(s)	129
BssMI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
Bst4CI	ACNGT	5 cut(s)	441, 722, 1008, 1390, 1400
Bst6I	CTCTTC	3 cut(s)	625, 791, 1506
BstBI	TTCGAA	1 cut(s)	1318
BstDEI	CTNAG	5 cut(s)	95, 709, 873, 951, 1142
BstDSI	CCRYGG	1 cut(s)	129
BstF5I	GGATG	6 cut(s)	246, 307, 481, 826, 919, 1025
BstFNI	CGCG	1 cut(s)	131
BstKTI	GATC	7 cut(s)	40, 602, 682, 919, 964, 1363, 1384
BstMAI	GTCTC	1 cut(s)	1481
BstMBI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
BstMCI	CGRYCG	2 cut(s)	138, 432
BstMWI	GCNNNNNNNGC	1 cut(s)	128
BstSFI	CTRYAG	3 cut(s)	381, 437, 1032
BstSLI	GKGCMC	2 cut(s)	344, 589
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	2 cut(s)	43, 753
BstV2I	GAAGAC	2 cut(s)	435, 1212
BstX2I	RGATCY	1 cut(s)	1381
BstYI	RGATCY	1 cut(s)	1381
BstZI	CGGCCG	1 cut(s)	135
BsuI	GTATCC	1 cut(s)	1247
BsuRI	GGCC	2 cut(s)	137, 1517
BtgI	CCRYGG	1 cut(s)	129
BtgZI	GCGATG	2 cut(s)	167, 180
BtsCI	GGATG	6 cut(s)	246, 307, 481, 826, 919, 1025
BtsI	GCAGTG	1 cut(s)	535
BtsIMutI	CAGTG	1 cut(s)	535
BveI	ACCTGC	1 cut(s)	374
Cfr10I	RCCGGY	1 cut(s)	148
Cfr13I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
Cfr42I	CCGCGG	1 cut(s)	132
Csp6I	GTAC	3 cut(s)	92, 1484, 1553
CviAII	CATG	2 cut(s)	841, 880
CviQI	GTAC	3 cut(s)	92, 1484, 1553
DdeI	CTNAG	5 cut(s)	95, 709, 873, 951, 1142
DpnI	GATC	7 cut(s)	39, 601, 681, 918, 963, 1362, 1383
DpnII	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
DraI	TTTAAA	1 cut(s)	1338
DraIII	CACNNNGTG	1 cut(s)	954
EaeI	YGGCCR	1 cut(s)	135
EagI	CGGCCG	1 cut(s)	135
Eam1104I	CTCTTC	3 cut(s)	625, 791, 1506
EarI	CTCTTC	3 cut(s)	625, 791, 1506
Ecl136II	GAGCTC	1 cut(s)	199
EclXI	CGGCCG	1 cut(s)	135
Eco24I	GRGCYC	2 cut(s)	201, 248
Eco31I	GGTCTC	1 cut(s)	1481
Eco47I	GGWCC	3 cut(s)	1113, 1262, 1444
Eco52I	CGGCCG	1 cut(s)	135
Eco53kI	GAGCTC	1 cut(s)	199
Eco57I	CTGAAG	2 cut(s)	308, 385
Eco88I	CYCGRG	2 cut(s)	366, 833
EcoICRI	GAGCTC	1 cut(s)	199
EcoO109I	RGGNCCY	1 cut(s)	1516
EcoRI	GAATTC	1 cut(s)	569
EcoT22I	ATGCAT	1 cut(s)	508
EcoT38I	GRGCYC	2 cut(s)	201, 248
FaeI	CATG	2 cut(s)	844, 883
FaqI	GGGAC	2 cut(s)	1126, 1430
FatI	CATG	2 cut(s)	840, 879
FauI	CCCGC	2 cut(s)	90, 1455
Fnu4HI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
FokI	GGATG	6 cut(s)	253, 314, 488, 833, 926, 1012
FriOI	GRGCYC	2 cut(s)	201, 248
Fsp4HI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
FspBI	CTAG	4 cut(s)	633, 738, 891, 1223
GluI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
GsuI	CTGGAG	1 cut(s)	317
HaeIII	GGCC	2 cut(s)	137, 1517
HapII	CCGG	3 cut(s)	86, 149, 257
Hin1II	CATG	2 cut(s)	844, 883
HindIII	AAGCTT	3 cut(s)	272, 1139, 1330
HinfI	GANTC	8 cut(s)	74, 799, 887, 894, 1219, 1256, 1283, 1293
HpaII	CCGG	3 cut(s)	86, 149, 257
HphI	GGTGA	3 cut(s)	414, 689, 734
Hpy166II	GTNNAC	1 cut(s)	1555
Hpy188III	TCNNGA	9 cut(s)	41, 609, 647, 872, 891, 1260, 1358, 1364, 1415
Hpy8I	GTNNAC	1 cut(s)	1555
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	4 cut(s)	197, 1140, 1150, 1171
HpyCH4III	ACNGT	5 cut(s)	441, 722, 1008, 1390, 1400
HpyCH4IV	ACGT	1 cut(s)	1209
HpyCH4V	TGCA	4 cut(s)	383, 506, 540, 577
HpyF10VI	GCNNNNNNNGC	1 cut(s)	128
HpyF3I	CTNAG	5 cut(s)	95, 709, 873, 951, 1142
HpySE526I	ACGT	1 cut(s)	1209
Hsp92II	CATG	2 cut(s)	844, 883
KspI	CCGCGG	1 cut(s)	132
Kzo9I	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
LmnI	GCTCC	3 cut(s)	172, 206, 335
Lsp1109I	GCAGC	2 cut(s)	43, 753
LweI	GCATC	2 cut(s)	1034, 1084
MaeI	CTAG	4 cut(s)	633, 738, 891, 1223
MaeII	ACGT	1 cut(s)	1209
MaeIII	GTNAC	2 cut(s)	533, 716
MalI	GATC	7 cut(s)	39, 601, 681, 918, 963, 1362, 1383
MbiI	CCGCTC	1 cut(s)	159
MboI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
MflI	RGATCY	1 cut(s)	1381
MhlI	GDGCHC	4 cut(s)	201, 248, 344, 589
MluCI	AATT	8 cut(s)	229, 455, 569, 867, 933, 994, 1311, 1320
MlyI	GAGTC	5 cut(s)	808, 881, 1228, 1277, 1287
MmeI	TCCRAC	2 cut(s)	453, 1382
Mph1103I	ATGCAT	1 cut(s)	508
MroXI	GAANNNNTTC	3 cut(s)	273, 867, 1209
MseI	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	3 cut(s)	86, 149, 257
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	1 cut(s)	128
NdeII	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
NlaIII	CATG	2 cut(s)	844, 883
NlaIV	GGNNCC	6 cut(s)	343, 762, 831, 1114, 1446, 1518
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	2 cut(s)	533, 716
NsiI	ATGCAT	1 cut(s)	508
NspV	TTCGAA	1 cut(s)	1318
PaqCI	CACCTGC	1 cut(s)	374
PdmI	GAANNNNTTC	3 cut(s)	273, 867, 1209
PfeI	GAWTC	3 cut(s)	74, 894, 1256
PkrI	GCNGC	7 cut(s)	33, 133, 136, 161, 164, 219, 743
PleI	GAGTC	5 cut(s)	807, 881, 1227, 1277, 1287
PpsI	GAGTC	5 cut(s)	807, 881, 1227, 1277, 1287
PshBI	ATTAAT	1 cut(s)	1200
Psp124BI	GAGCTC	1 cut(s)	201
PspN4I	GGNNCC	6 cut(s)	343, 762, 831, 1114, 1446, 1518
PspPI	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
PstI	CTGCAG	1 cut(s)	385
PsuI	RGATCY	1 cut(s)	1381
RsaI	GTAC	3 cut(s)	93, 1485, 1554
RsaNI	GTAC	3 cut(s)	92, 1484, 1553
SacI	GAGCTC	1 cut(s)	201
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
SatI	GCNGC	7 cut(s)	32, 132, 135, 160, 163, 218, 742
Sau3AI	GATC	7 cut(s)	37, 599, 679, 916, 961, 1360, 1381
Sau96I	GGNCC	4 cut(s)	1113, 1262, 1444, 1516
SchI	GAGTC	5 cut(s)	808, 881, 1228, 1277, 1287
SduI	GDGCHC	4 cut(s)	201, 248, 344, 589
SfaNI	GCATC	2 cut(s)	1034, 1084
SfcI	CTRYAG	3 cut(s)	381, 437, 1032
Sfr303I	CCGCGG	1 cut(s)	132
SfuI	TTCGAA	1 cut(s)	1318
SgrAI	CRCCGGYG	1 cut(s)	148
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	3 cut(s)	1113, 1262, 1444
SmlI	CTYRAG	1 cut(s)	176
SmoI	CTYRAG	1 cut(s)	176
Sse9I	AATT	8 cut(s)	229, 455, 569, 867, 933, 994, 1311, 1320
SspMI	CTAG	4 cut(s)	633, 738, 891, 1223
SstI	GAGCTC	1 cut(s)	201
TaaI	ACNGT	5 cut(s)	441, 722, 1008, 1390, 1400
TaiI	ACGT	1 cut(s)	1212
TaqI	TCGA	3 cut(s)	201, 598, 1318
TaqII	GACCGA	1 cut(s)	446
TasI	AATT	8 cut(s)	229, 455, 569, 867, 933, 994, 1311, 1320
TatI	WGTACW	1 cut(s)	1483
TauI	GCSGC	5 cut(s)	134, 137, 162, 165, 220
TfiI	GAWTC	3 cut(s)	74, 894, 1256
Tru1I	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
Tru9I	TTAA	5 cut(s)	213, 450, 1200, 1326, 1337
TscAI	CASTG	1 cut(s)	542
TseFI	GTSAC	2 cut(s)	533, 716
TseI	GCWGC	2 cut(s)	31, 741
Tsp45I	GTSAC	2 cut(s)	533, 716
TspRI	CASTG	1 cut(s)	542
VpaK11BI	GGWCC	3 cut(s)	1113, 1262, 1444
VspI	ATTAAT	1 cut(s)	1200
XapI	RAATTY	6 cut(s)	229, 455, 569, 867, 933, 994
XbaI	TCTAGA	1 cut(s)	890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	814
XmnI	GAANNNNTTC	3 cut(s)	273, 867, 1209
XspI	CTAG	4 cut(s)	633, 738, 891, 1223
Zsp2I	ATGCAT	1 cut(s)	508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.