Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004755

Physical Location & Seq

Genomic Coordinates Forward (+)

2500228 .. 2504893

Gene Structure 4666 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005875

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGAAGGAGAGAGAGCCGAGAAGAAGAGGCAGCTTGATCTTGACTATAACAAACTCTTGGGCGACAATGACGATTCTGACCCGCCGGAGGTACTGAGAGTGAAGAAGCCCAAAGCCGTAGCCACCACCGCGGCGGCCGACGAGCCACCGGCGATGAGCGGCGGCGATGAGCAGCGAGATGAGGAGCTTGAGAAGATGAACAATAATGAGCTCGGAGGAGCGATTAAGCGGCAAGTGGAAACTTTGAAGCGGATTGGTTCTATGTTGCCGGACAAAGGCGAAAAGCTTCGAATTCGTCTGAAGAAACTGGAGGATGAACAGGGGAGGAGGAGGCTTGAACGGTCCGAGAGGGGCACCAGTAAGGGGGAGAAGCCTACCCAAGCGACGAGCTCTGCAGGTGTTTCTAATGGCTTCAGAGATAAGGAGGCTACATCACCCCCTGGCGAGCTACAGTCTTCATTTAATAAATTCTTTTCTAAAAAGTTGGATGACAATAAAGATTGTAGCAAGGGCAATGCATTTGAAAGAGAGTTATCAACTTTGGGTCACTGCAACCGCCAGAAAAGGAACAATAATGGAGAATTCTTGCAAAAGGGGGCACAGAAAGGTCGATCTTCATCAAGACATTTCCCTTCTCAAAGCCCTAGCAACTTTTATCATGATAAAGATAAAAGTTTTCTCTCAAATGGTGATCGTAAAGGCAGAGCTTCTTCCAATAACTCAGGTCGTCACGGTGAGGAAAACTTCTCTAGCAGCTTTGCAAAAAGGGAGGAACCGTATCAACTTCGGAATAGGGATAGGAATAGGAAGAGTCAGACCATTTTACTAGTGGATGAGGAGGAACCCGAGTTCATGGACACCACAGAGCAAATAGAAGAAATTCCTGAGAGCATGAAAGACTCTAGAATCTACTATCCATCAAGGGATGATCCACATTCTGTTGAAATTTGTTATACAGACACTAAGTGCCTTGATCCTCAAAGCTACTTGACATCAGCTATTATGAATTTCTACATACGGTATTTACATCAACAAGCATCCCCTACAGACAGGGGAATATGTGTGTTTCATTTCTTCAATACCTTTTTTTACAATAAGCTCAAAGATGCTGTATCAGAAAAGGGGACCAACAAGGATAACCTTTTTGTCAAGCTTAGAAGGTGGTGGAAGGGTGTTGATATATTTCAGAAGGCTTACATACTTATTCCTATCAATGAAGACGTTCATTGGAGTCTAGTCATTATCTGTATCCCTGATAAGGAAGAAGAATCAGGACCACTTGTTCTTCATTTAGACTCATTAGGACTCCATTGTAGCAAATCAATTTTTCGAATTATTAAAAGCTTTTTAAAAGAAGAATGGTGCTATCTGGATCAAGAAGTTGATATTTCAGATCTAACAGTTTCAGACTGTTGGAAACAACTTCCTGACCATATTGAGGAGAAAAAACTTGTGGTCCCGCAACAGAAAAATGACTATGATTGTGGTCTCTTTGTACTCTTGTTTATGGAACGCTTTATAGAAGAGGCCCCTAAAAGGCTGAAAAAGAAAGATTTAGCAAGGTTTGGAAGGCAGTGGTTCCAACCTGTGGAGGCTTCTAGGTTGAGAAGTAAAATCCGGAAGTTACTCAAGGAAGAATTTCAAAATGCATCCAAGTCAAACTGCTCTAAAGAATCTTCTTCTCTGACTGATGCTTCTGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009628 GO:0009651 GO:0009791 GO:0009987 GO:0010228 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

569

Amino Acids

65.52

Weight (kDa)

7.15

Isoelectric Point (pI)

55.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	329 - 530	3.4e-40	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10570 AT1G10570 AT1G10570 AT1G60220
fragaria_vesca	FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560 FvH4_4g34560
malus_domestica	MD13G1091500.v1.1
prunus_persica	Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1 Prupe.1G254600_v2.0.a1
pyrus_communis	pycom13g07950
rosa_chinensis	RchiOBHm_Chr3g0455541 RchiOBHm_Chr4g0443941
rosa_laevigata	RLG00000005875
rosa_multiflora	Rmu_sc0011390.1_g000004
rosa_roxburghii	Rroxscaffold_5G00384480
rosa_rugosa	Rorug03G0008300 Rorug04G0348400 Rorug04G0348500
rosa_samantha	Rh4AG409000 Rh4BG420100 Rh4CG434100 Rh4DG415100
rosa_wichuraiana	Rw3G005410 Rw4G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	386
Acc36I	ACCTGC	1 cut(s)	386
AccB1I	GGYRCC	1 cut(s)	353
AccB7I	CCANNNNNTGG	1 cut(s)	1588
AccBSI	CCGCTC	1 cut(s)	159
AccII	CGCG	1 cut(s)	131
AccIII	TCCGGA	1 cut(s)	1617
AclWI	GGATC	3 cut(s)	923, 968, 1380
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	7 cut(s)	291, 467, 581, 879, 945, 1006, 1637
AcuI	CTGAAG	2 cut(s)	320, 397
AdeI	CACNNNGTG	1 cut(s)	966
AfaI	GTAC	2 cut(s)	93, 1497
AfiI	CCNNNNNNNGG	7 cut(s)	88, 275, 363, 1258, 1438, 1536, 1588
AgsI	TTSAA	6 cut(s)	247, 338, 524, 944, 1078, 1643
AhlI	ACTAGT	1 cut(s)	826
AjnI	CCWGG	1 cut(s)	439
AloI	GAACNNNNNNTCC	4 cut(s)	833, 865, 1266, 1298
Alw21I	GWGCWC	2 cut(s)	213, 392
Alw26I	GTCTC	1 cut(s)	1493
AlwI	GGATC	3 cut(s)	923, 968, 1380
Ama87I	CYCGRG	1 cut(s)	845
Aor13HI	TCCGGA	1 cut(s)	1617
AoxI	GGCC	2 cut(s)	135, 1527
ApeKI	GCWGC	3 cut(s)	31, 172, 753
ApoI	RAATTY	7 cut(s)	291, 467, 581, 879, 945, 1006, 1637
Asp700I	GAANNNNTTC	4 cut(s)	285, 879, 1221, 1638
AspS9I	GGNCC	5 cut(s)	342, 1125, 1274, 1456, 1528
AsuHPI	GGTGA	3 cut(s)	426, 701, 746
AsuII	TTCGAA	2 cut(s)	289, 1330
AvaI	CYCGRG	1 cut(s)	845
AvaII	GGWCC	4 cut(s)	342, 1125, 1274, 1456
BaeGI	GKGCMC	2 cut(s)	356, 601
BanI	GGYRCC	1 cut(s)	353
BanII	GRGCYC	2 cut(s)	213, 392
BbsI	GAAGAC	2 cut(s)	447, 1224
Bbv12I	GWGCWC	2 cut(s)	213, 392
BbvI	GCAGC	3 cut(s)	43, 184, 765
BccI	CCATC	1 cut(s)	925
BceAI	ACGGC	1 cut(s)	101
BciT130I	CCWGG	1 cut(s)	441
BciVI	GTATCC	1 cut(s)	1259
BcoDI	GTCTC	1 cut(s)	1493
BcuI	ACTAGT	1 cut(s)	826
BfaI	CTAG	6 cut(s)	645, 750, 827, 903, 1235, 1599
BfmI	CTRYAG	3 cut(s)	393, 449, 1044
BfuAI	ACCTGC	1 cut(s)	386
BfuI	GTATCC	1 cut(s)	1259
BglII	AGATCT	1 cut(s)	1393
BisI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 754
BlsI	GCNGC	8 cut(s)	33, 133, 136, 161, 164, 174, 231, 755
Bme1390I	CCNGG	1 cut(s)	441
Bme18I	GGWCC	4 cut(s)	342, 1125, 1274, 1456
BmeT110I	CYCGRG	1 cut(s)	845
BmgT120I	GGNCC	5 cut(s)	342, 1125, 1274, 1456, 1528
BmiI	GGNNCC	7 cut(s)	355, 774, 843, 1126, 1458, 1530, 1580
BmrFI	CCNGG	1 cut(s)	441
BmsI	GCATC	4 cut(s)	1046, 1096, 1658, 1681
BpiI	GAAGAC	2 cut(s)	447, 1224
BpmI	CTGGAG	1 cut(s)	329
Bpu14I	TTCGAA	2 cut(s)	289, 1330
BpuEI	CTTGAG	2 cut(s)	209, 1613
BsaBI	GATNNNNATC	1 cut(s)	616
BsaI	GGTCTC	1 cut(s)	1493
BsaJI	CCNNGG	2 cut(s)	129, 439
BsaWI	WCCGGW	1 cut(s)	1617
BsaXI	ACNNNNNCTCC	2 cut(s)	761, 791
Bsc4I	CCNNNNNNNGG	7 cut(s)	88, 275, 363, 1258, 1438, 1536, 1588
Bse118I	RCCGGY	1 cut(s)	148
Bse1I	ACTGG	2 cut(s)	312, 357
Bse3DI	GCAATG	1 cut(s)	520
Bse8I	GATNNNNATC	1 cut(s)	616
BseAI	TCCGGA	1 cut(s)	1617
BseBI	CCWGG	1 cut(s)	441
BseDI	CCNNGG	2 cut(s)	129, 439
BseGI	GGATG	6 cut(s)	319, 493, 838, 931, 1037, 1649
BseJI	GATNNNNATC	1 cut(s)	616
BseLI	CCNNNNNNNGG	7 cut(s)	88, 275, 363, 1258, 1438, 1536, 1588
BseMI	GCAATG	1 cut(s)	520
BseMII	CTCAG	3 cut(s)	86, 735, 876
BseNI	ACTGG	2 cut(s)	312, 357
BseRI	GAGGAG	6 cut(s)	197, 231, 340, 343, 851, 1454
BseSI	GKGCMC	2 cut(s)	356, 601
BseX3I	CGGCCG	1 cut(s)	135
BseXI	GCAGC	3 cut(s)	43, 184, 765
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	1 cut(s)	138
BshFI	GGCC	2 cut(s)	137, 1529
BshNI	GGYRCC	1 cut(s)	353
BsiEI	CGRYCG	1 cut(s)	138
BsiHKAI	GWGCWC	2 cut(s)	213, 392
BsiHKCI	CYCGRG	1 cut(s)	845
BsiSI	CCGG	4 cut(s)	86, 149, 269, 1618
BslFI	GGGAC	2 cut(s)	1138, 1442
BslI	CCNNNNNNNGG	7 cut(s)	88, 275, 363, 1258, 1438, 1536, 1588
BsmAI	GTCTC	1 cut(s)	1493
BsmFI	GGGAC	2 cut(s)	1138, 1442
BsnI	GGCC	2 cut(s)	137, 1529
Bso31I	GGTCTC	1 cut(s)	1493
BsoBI	CYCGRG	1 cut(s)	845
Bsp119I	TTCGAA	2 cut(s)	289, 1330
Bsp1286I	GDGCHC	4 cut(s)	213, 356, 392, 601
Bsp13I	TCCGGA	1 cut(s)	1617
Bsp143I	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
BspANI	GGCC	2 cut(s)	137, 1529
BspCNI	CTCAG	3 cut(s)	87, 734, 877
BspEI	TCCGGA	1 cut(s)	1617
BspFNI	CGCG	1 cut(s)	131
BspHI	TCATGA	1 cut(s)	658
BspLI	GGNNCC	7 cut(s)	355, 774, 843, 1126, 1458, 1530, 1580
BspMAI	CTGCAG	1 cut(s)	397
BspMI	ACCTGC	1 cut(s)	386
BspPI	GGATC	3 cut(s)	923, 968, 1380
BspT104I	TTCGAA	2 cut(s)	289, 1330
BspT107I	GGYRCC	1 cut(s)	353
BspTNI	GGTCTC	1 cut(s)	1493
BsrBI	CCGCTC	1 cut(s)	159
BsrDI	GCAATG	1 cut(s)	520
BsrFI	RCCGGY	1 cut(s)	148
BsrI	ACTGG	2 cut(s)	312, 357
BssAI	RCCGGY	1 cut(s)	148
BssECI	CCNNGG	2 cut(s)	129, 439
BssMI	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
Bst2UI	CCWGG	1 cut(s)	441
Bst4CI	ACNGT	7 cut(s)	342, 453, 734, 777, 1020, 1402, 1412
Bst6I	CTCTTC	3 cut(s)	20, 803, 1518
BstBI	TTCGAA	2 cut(s)	289, 1330
BstC8I	GCNNGC	1 cut(s)	446
BstDEI	CTNAG	5 cut(s)	95, 721, 885, 963, 1154
BstDSI	CCRYGG	1 cut(s)	129
BstF5I	GGATG	6 cut(s)	319, 493, 838, 931, 1037, 1649
BstFNI	CGCG	1 cut(s)	131
BstKTI	GATC	7 cut(s)	40, 614, 694, 931, 976, 1375, 1396
BstMAI	GTCTC	1 cut(s)	1493
BstMBI	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
BstMCI	CGRYCG	1 cut(s)	138
BstMWI	GCNNNNNNNGC	1 cut(s)	128
BstNI	CCWGG	1 cut(s)	441
BstSCI	CCNGG	1 cut(s)	439
BstSFI	CTRYAG	3 cut(s)	393, 449, 1044
BstSLI	GKGCMC	2 cut(s)	356, 601
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	3 cut(s)	43, 184, 765
BstV2I	GAAGAC	2 cut(s)	447, 1224
BstX2I	RGATCY	1 cut(s)	1393
BstYI	RGATCY	1 cut(s)	1393
BstZI	CGGCCG	1 cut(s)	135
BsuI	GTATCC	1 cut(s)	1259
BsuRI	GGCC	2 cut(s)	137, 1529
BtgI	CCRYGG	1 cut(s)	129
BtgZI	GCGATG	2 cut(s)	167, 180
BtsCI	GGATG	6 cut(s)	319, 493, 838, 931, 1037, 1649
BtsI	GCAGTG	2 cut(s)	547, 1580
BtsIMutI	CAGTG	2 cut(s)	547, 1580
BveI	ACCTGC	1 cut(s)	386
Cac8I	GCNNGC	1 cut(s)	446
CciI	TCATGA	1 cut(s)	658
Cfr10I	RCCGGY	1 cut(s)	148
Cfr13I	GGNCC	5 cut(s)	342, 1125, 1274, 1456, 1528
Cfr42I	CCGCGG	1 cut(s)	132
CpoI	CGGWCCG	1 cut(s)	342
Csp6I	GTAC	2 cut(s)	92, 1496
CspI	CGGWCCG	1 cut(s)	342
CviAII	CATG	3 cut(s)	659, 853, 892
CviQI	GTAC	2 cut(s)	92, 1496
DdeI	CTNAG	5 cut(s)	95, 721, 885, 963, 1154
DpnI	GATC	7 cut(s)	39, 613, 693, 930, 975, 1374, 1395
DpnII	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
DraI	TTTAAA	1 cut(s)	1350
DraIII	CACNNNGTG	1 cut(s)	966
EaeI	YGGCCR	1 cut(s)	135
EagI	CGGCCG	1 cut(s)	135
Eam1104I	CTCTTC	3 cut(s)	20, 803, 1518
EarI	CTCTTC	3 cut(s)	20, 803, 1518
Ecl136II	GAGCTC	2 cut(s)	211, 390
EclXI	CGGCCG	1 cut(s)	135
Eco24I	GRGCYC	2 cut(s)	213, 392
Eco31I	GGTCTC	1 cut(s)	1493
Eco47I	GGWCC	4 cut(s)	342, 1125, 1274, 1456
Eco52I	CGGCCG	1 cut(s)	135
Eco53kI	GAGCTC	2 cut(s)	211, 390
Eco57I	CTGAAG	2 cut(s)	320, 397
Eco88I	CYCGRG	1 cut(s)	845
EcoICRI	GAGCTC	2 cut(s)	211, 390
EcoO109I	RGGNCCY	1 cut(s)	1528
EcoRI	GAATTC	2 cut(s)	291, 581
EcoRII	CCWGG	1 cut(s)	439
EcoT22I	ATGCAT	2 cut(s)	520, 1651
EcoT38I	GRGCYC	2 cut(s)	213, 392
FaeI	CATG	3 cut(s)	662, 856, 895
FaqI	GGGAC	2 cut(s)	1138, 1442
FatI	CATG	3 cut(s)	658, 852, 891
FauI	CCCGC	2 cut(s)	90, 1467
Fnu4HI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 754
FokI	GGATG	6 cut(s)	326, 500, 845, 938, 1024, 1636
FriOI	GRGCYC	2 cut(s)	213, 392
Fsp4HI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 754
FspBI	CTAG	6 cut(s)	645, 750, 827, 903, 1235, 1599
GluI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 754
GsuI	CTGGAG	1 cut(s)	329
HaeIII	GGCC	2 cut(s)	137, 1529
HapII	CCGG	4 cut(s)	86, 149, 269, 1618
Hin1II	CATG	3 cut(s)	662, 856, 895
HindIII	AAGCTT	3 cut(s)	284, 1151, 1342
HinfI	GANTC	9 cut(s)	74, 811, 899, 906, 1231, 1268, 1295, 1305, 1673
HpaII	CCGG	4 cut(s)	86, 149, 269, 1618
HphI	GGTGA	3 cut(s)	426, 701, 746
Hpy99I	CGWCG	2 cut(s)	143, 388
HpyAV	CCTTC	5 cut(s)	642, 1152, 1162, 1183, 1563
HpyCH4III	ACNGT	7 cut(s)	342, 453, 734, 777, 1020, 1402, 1412
HpyCH4IV	ACGT	1 cut(s)	1221
HpyCH4V	TGCA	6 cut(s)	395, 518, 552, 589, 761, 1649
HpyF10VI	GCNNNNNNNGC	1 cut(s)	128
HpyF3I	CTNAG	5 cut(s)	95, 721, 885, 963, 1154
HpySE526I	ACGT	1 cut(s)	1221
Hsp92II	CATG	3 cut(s)	662, 856, 895
Kpn2I	TCCGGA	1 cut(s)	1617
KspI	CCGCGG	1 cut(s)	132
Kzo9I	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
LmnI	GCTCC	2 cut(s)	184, 218
Lsp1109I	GCAGC	3 cut(s)	43, 184, 765
LweI	GCATC	4 cut(s)	1046, 1096, 1658, 1681
MaeI	CTAG	6 cut(s)	645, 750, 827, 903, 1235, 1599
MaeII	ACGT	1 cut(s)	1221
MaeIII	GTNAC	3 cut(s)	545, 728, 1623
MalI	GATC	7 cut(s)	39, 613, 693, 930, 975, 1374, 1395
MbiI	CCGCTC	1 cut(s)	159
MboI	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
MflI	RGATCY	1 cut(s)	1393
MhlI	GDGCHC	4 cut(s)	213, 356, 392, 601
MluCI	AATT	9 cut(s)	291, 467, 581, 879, 945, 1006, 1323, 1332, 1637
MlyI	GAGTC	5 cut(s)	820, 893, 1240, 1289, 1299
MmeI	TCCRAC	3 cut(s)	465, 1394, 1606
Mph1103I	ATGCAT	2 cut(s)	520, 1651
MroI	TCCGGA	1 cut(s)	1617
MroXI	GAANNNNTTC	4 cut(s)	285, 879, 1221, 1638
MseI	TTAA	4 cut(s)	225, 462, 1338, 1349
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	4 cut(s)	86, 149, 269, 1618
MspR9I	CCNGG	1 cut(s)	441
MvaI	CCWGG	1 cut(s)	441
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	1 cut(s)	128
NdeII	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
NlaIII	CATG	3 cut(s)	662, 856, 895
NlaIV	GGNNCC	7 cut(s)	355, 774, 843, 1126, 1458, 1530, 1580
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	2 cut(s)	545, 728
NsiI	ATGCAT	2 cut(s)	520, 1651
NspV	TTCGAA	2 cut(s)	289, 1330
PagI	TCATGA	1 cut(s)	658
PaqCI	CACCTGC	1 cut(s)	386
PdmI	GAANNNNTTC	4 cut(s)	285, 879, 1221, 1638
PfeI	GAWTC	4 cut(s)	74, 906, 1268, 1673
PflMI	CCANNNNNTGG	1 cut(s)	1588
PkrI	GCNGC	8 cut(s)	33, 133, 136, 161, 164, 174, 231, 755
PleI	GAGTC	5 cut(s)	819, 893, 1239, 1289, 1299
PpsI	GAGTC	5 cut(s)	819, 893, 1239, 1289, 1299
Psp124BI	GAGCTC	2 cut(s)	213, 392
Psp6I	CCWGG	1 cut(s)	439
PspGI	CCWGG	1 cut(s)	439
PspN4I	GGNNCC	7 cut(s)	355, 774, 843, 1126, 1458, 1530, 1580
PspPI	GGNCC	5 cut(s)	342, 1125, 1274, 1456, 1528
PstI	CTGCAG	1 cut(s)	397
PsuI	RGATCY	1 cut(s)	1393
RsaI	GTAC	2 cut(s)	93, 1497
RsaNI	GTAC	2 cut(s)	92, 1496
Rsr2I	CGGWCCG	1 cut(s)	342
RsrII	CGGWCCG	1 cut(s)	342
SacI	GAGCTC	2 cut(s)	213, 392
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	4 cut(s)	225, 462, 1338, 1349
SatI	GCNGC	8 cut(s)	32, 132, 135, 160, 163, 173, 230, 754
Sau3AI	GATC	7 cut(s)	37, 611, 691, 928, 973, 1372, 1393
Sau96I	GGNCC	5 cut(s)	342, 1125, 1274, 1456, 1528
SchI	GAGTC	5 cut(s)	820, 893, 1240, 1289, 1299
ScrFI	CCNGG	1 cut(s)	441
SduI	GDGCHC	4 cut(s)	213, 356, 392, 601
SfaNI	GCATC	4 cut(s)	1046, 1096, 1658, 1681
SfcI	CTRYAG	3 cut(s)	393, 449, 1044
Sfr303I	CCGCGG	1 cut(s)	132
SfuI	TTCGAA	2 cut(s)	289, 1330
SgrAI	CRCCGGYG	1 cut(s)	148
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	4 cut(s)	342, 1125, 1274, 1456
SmlI	CTYRAG	2 cut(s)	188, 1628
SmoI	CTYRAG	2 cut(s)	188, 1628
SpeI	ACTAGT	1 cut(s)	826
Sse9I	AATT	9 cut(s)	291, 467, 581, 879, 945, 1006, 1323, 1332, 1637
SspMI	CTAG	6 cut(s)	645, 750, 827, 903, 1235, 1599
SstI	GAGCTC	2 cut(s)	213, 392
StyD4I	CCNGG	1 cut(s)	439
TaaI	ACNGT	7 cut(s)	342, 453, 734, 777, 1020, 1402, 1412
TaiI	ACGT	1 cut(s)	1224
TaqI	TCGA	3 cut(s)	289, 610, 1330
TasI	AATT	9 cut(s)	291, 467, 581, 879, 945, 1006, 1323, 1332, 1637
TatI	WGTACW	1 cut(s)	1495
TauI	GCSGC	5 cut(s)	134, 137, 162, 165, 232
TfiI	GAWTC	4 cut(s)	74, 906, 1268, 1673
Tru1I	TTAA	4 cut(s)	225, 462, 1338, 1349
Tru9I	TTAA	4 cut(s)	225, 462, 1338, 1349
TscAI	CASTG	2 cut(s)	554, 1580
TseFI	GTSAC	2 cut(s)	545, 728
TseI	GCWGC	3 cut(s)	31, 172, 753
Tsp45I	GTSAC	2 cut(s)	545, 728
TspRI	CASTG	2 cut(s)	554, 1580
Van91I	CCANNNNNTGG	1 cut(s)	1588
VpaK11BI	GGWCC	4 cut(s)	342, 1125, 1274, 1456
XapI	RAATTY	7 cut(s)	291, 467, 581, 879, 945, 1006, 1637
XbaI	TCTAGA	1 cut(s)	902
XcmI	CCANNNNNNNNNTGG	1 cut(s)	826
XmnI	GAANNNNTTC	4 cut(s)	285, 879, 1221, 1638
XspI	CTAG	6 cut(s)	645, 750, 827, 903, 1235, 1599
Zsp2I	ATGCAT	2 cut(s)	520, 1651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.