No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0065551 RchiOBHm_Chr7g0210331 |
| rosa_laevigata | RLG00000013135 |
| rosa_multiflora | Rmu_sc0000573.1_g000032 Rmu_sc0002482.1_g000022 Rmu_sc0002853.1_g000007 Rmu_sc0004465.1_g000025 Rmu_sc0008877.1_g000005 Rmu_sc0012973.1_g000003 Rmu_sc0025057.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086520 Rroxscaffold_3G00227130 Rroxscaffold_5G00377700 |
| rosa_rugosa | Rorug01G0061800 |
| rosa_samantha | Rh1AG059300 Rh1AG069300 Rh1AG241800 Rh1BG052700 Rh1CG225600 Rh1CG299900 Rh2BG263100 Rh2CG584100 Rh3BG245100 Rh4BG041800 Rh5AG536800 Rh6AG270100 Rh6BG090500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 39 |
| AhlI | ACTAGT | 1 cut(s) | 127 |
| AluBI | AGCT | 1 cut(s) | 80 |
| AluI | AGCT | 1 cut(s) | 80 |
| BccI | CCATC | 2 cut(s) | 61, 103 |
| BclI | TGATCA | 1 cut(s) | 27 |
| BcuI | ACTAGT | 1 cut(s) | 127 |
| BfaI | CTAG | 2 cut(s) | 128, 139 |
| Bse1I | ACTGG | 1 cut(s) | 96 |
| BseNI | ACTGG | 1 cut(s) | 96 |
| BsgI | GTGCAG | 1 cut(s) | 30 |
| Bsp143I | GATC | 1 cut(s) | 27 |
| BsrI | ACTGG | 1 cut(s) | 96 |
| BssMI | GATC | 1 cut(s) | 27 |
| BstKTI | GATC | 1 cut(s) | 30 |
| BstMBI | GATC | 1 cut(s) | 27 |
| BtsIMutI | CAGTG | 1 cut(s) | 103 |
| CviJI | RGCY | 1 cut(s) | 80 |
| CviKI_1 | RGCY | 1 cut(s) | 80 |
| DpnI | GATC | 1 cut(s) | 29 |
| DpnII | GATC | 1 cut(s) | 27 |
| FaiI | YATR | 2 cut(s) | 65, 107 |
| FbaI | TGATCA | 1 cut(s) | 27 |
| FspBI | CTAG | 2 cut(s) | 128, 139 |
| FspEI | CC | 6 cut(s) | 32, 53, 59, 95, 101, 109 |
| HpyCH4V | TGCA | 3 cut(s) | 47, 59, 117 |
| Ksp22I | TGATCA | 1 cut(s) | 27 |
| Kzo9I | GATC | 1 cut(s) | 27 |
| LpnPI | CCDG | 2 cut(s) | 101, 109 |
| MaeI | CTAG | 2 cut(s) | 128, 139 |
| MalI | GATC | 1 cut(s) | 29 |
| MboI | GATC | 1 cut(s) | 27 |
| MluCI | AATT | 1 cut(s) | 118 |
| MmeI | TCCRAC | 1 cut(s) | 54 |
| MnlI | CCTC | 1 cut(s) | 4 |
| NdeII | GATC | 1 cut(s) | 27 |
| Sau3AI | GATC | 1 cut(s) | 27 |
| SetI | ASST | 3 cut(s) | 21, 82, 90 |
| SgeI | CNNG | 3 cut(s) | 32, 100, 108 |
| SpeI | ACTAGT | 1 cut(s) | 127 |
| Sse9I | AATT | 1 cut(s) | 118 |
| SspMI | CTAG | 2 cut(s) | 128, 139 |
| TaqI | TCGA | 1 cut(s) | 6 |
| TasI | AATT | 1 cut(s) | 118 |
| TscAI | CASTG | 1 cut(s) | 103 |
| TspRI | CASTG | 1 cut(s) | 103 |
| XspI | CTAG | 2 cut(s) | 128, 139 |