Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0065551 RchiOBHm_Chr7g0210331 |
| rosa_laevigata | RLG00000013135 |
| rosa_multiflora | Rmu_sc0000573.1_g000032 Rmu_sc0002482.1_g000022 Rmu_sc0002853.1_g000007 Rmu_sc0004465.1_g000025 Rmu_sc0008877.1_g000005 Rmu_sc0012973.1_g000003 Rmu_sc0025057.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086520 Rroxscaffold_3G00227130 Rroxscaffold_5G00377700 |
| rosa_rugosa | Rorug01G0061800 |
| rosa_samantha | Rh1AG059300 Rh1AG069300 Rh1AG241800 Rh1BG052700 Rh1CG225600 Rh1CG299900 Rh2BG263100 Rh2CG584100 Rh3BG245100 Rh4BG041800 Rh5AG536800 Rh6AG270100 Rh6BG090500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 24 |
| AclWI | GGATC | 1 cut(s) | 388 |
| AcsI | RAATTY | 1 cut(s) | 10 |
| AcyI | GRCGYC | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 46 |
| AgsI | TTSAA | 2 cut(s) | 16, 240 |
| AjnI | CCWGG | 2 cut(s) | 133, 366 |
| AluBI | AGCT | 2 cut(s) | 281, 363 |
| AluI | AGCT | 2 cut(s) | 281, 363 |
| AlwI | GGATC | 1 cut(s) | 388 |
| AoxI | GGCC | 1 cut(s) | 49 |
| ApeKI | GCWGC | 1 cut(s) | 360 |
| ApoI | RAATTY | 1 cut(s) | 10 |
| AspS9I | GGNCC | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 3 cut(s) | 19, 139, 149 |
| AsuII | TTCGAA | 1 cut(s) | 199 |
| BbvI | GCAGC | 1 cut(s) | 372 |
| BccI | CCATC | 3 cut(s) | 262, 352, 365 |
| BciT130I | CCWGG | 2 cut(s) | 135, 368 |
| BclI | TGATCA | 1 cut(s) | 228 |
| BfaI | CTAG | 1 cut(s) | 406 |
| BisI | GCNGC | 1 cut(s) | 361 |
| BlsI | GCNGC | 1 cut(s) | 362 |
| Bme1390I | CCNGG | 2 cut(s) | 135, 368 |
| BmgT120I | GGNCC | 1 cut(s) | 49 |
| BmiI | GGNNCC | 1 cut(s) | 28 |
| BmrFI | CCNGG | 2 cut(s) | 135, 368 |
| BmsI | GCATC | 1 cut(s) | 300 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 50, 82 |
| BpmI | CTGGAG | 1 cut(s) | 117 |
| Bpu14I | TTCGAA | 1 cut(s) | 199 |
| BpuEI | CTTGAG | 1 cut(s) | 374 |
| BsaHI | GRCGYC | 1 cut(s) | 21 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 46 |
| Bse118I | RCCGGY | 1 cut(s) | 86 |
| Bse1I | ACTGG | 1 cut(s) | 297 |
| BseBI | CCWGG | 2 cut(s) | 135, 368 |
| BseGI | GGATG | 2 cut(s) | 120, 376 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BseNI | ACTGG | 1 cut(s) | 297 |
| BseXI | GCAGC | 1 cut(s) | 372 |
| BsgI | GTGCAG | 1 cut(s) | 231 |
| BshFI | GGCC | 1 cut(s) | 51 |
| BsiSI | CCGG | 1 cut(s) | 87 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BsnI | GGCC | 1 cut(s) | 51 |
| Bsp119I | TTCGAA | 1 cut(s) | 199 |
| Bsp143I | GATC | 3 cut(s) | 103, 228, 393 |
| BspANI | GGCC | 1 cut(s) | 51 |
| BspLI | GGNNCC | 1 cut(s) | 28 |
| BspPI | GGATC | 1 cut(s) | 388 |
| BspT104I | TTCGAA | 1 cut(s) | 199 |
| BsrFI | RCCGGY | 1 cut(s) | 86 |
| BsrI | ACTGG | 1 cut(s) | 297 |
| BssAI | RCCGGY | 1 cut(s) | 86 |
| BssMI | GATC | 3 cut(s) | 103, 228, 393 |
| BssNI | GRCGYC | 1 cut(s) | 21 |
| Bst2UI | CCWGG | 2 cut(s) | 135, 368 |
| Bst6I | CTCTTC | 2 cut(s) | 113, 179 |
| BstACI | GRCGYC | 1 cut(s) | 21 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 96 |
| BstBI | TTCGAA | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 1 cut(s) | 382 |
| BstF5I | GGATG | 2 cut(s) | 120, 376 |
| BstKTI | GATC | 3 cut(s) | 106, 231, 396 |
| BstMBI | GATC | 3 cut(s) | 103, 228, 393 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 96 |
| BstNI | CCWGG | 2 cut(s) | 135, 368 |
| BstSCI | CCNGG | 2 cut(s) | 133, 366 |
| BstV1I | GCAGC | 1 cut(s) | 372 |
| BstX2I | RGATCY | 1 cut(s) | 393 |
| BstYI | RGATCY | 1 cut(s) | 393 |
| BsuRI | GGCC | 1 cut(s) | 51 |
| BtsCI | GGATG | 2 cut(s) | 120, 376 |
| BtsIMutI | CAGTG | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 1 cut(s) | 382 |
| Cfr10I | RCCGGY | 1 cut(s) | 86 |
| Cfr13I | GGNCC | 1 cut(s) | 49 |
| CviAII | CATG | 1 cut(s) | 73 |
| CviJI | RGCY | 4 cut(s) | 51, 194, 281, 363 |
| CviKI_1 | RGCY | 4 cut(s) | 51, 194, 281, 363 |
| DpnI | GATC | 3 cut(s) | 105, 230, 395 |
| DpnII | GATC | 3 cut(s) | 103, 228, 393 |
| Eam1104I | CTCTTC | 2 cut(s) | 113, 179 |
| EarI | CTCTTC | 2 cut(s) | 113, 179 |
| EcoRII | CCWGG | 2 cut(s) | 133, 366 |
| FaeI | CATG | 1 cut(s) | 76 |
| FaiI | YATR | 2 cut(s) | 74, 308 |
| FatI | CATG | 1 cut(s) | 72 |
| FbaI | TGATCA | 1 cut(s) | 228 |
| Fnu4HI | GCNGC | 1 cut(s) | 361 |
| FokI | GGATG | 2 cut(s) | 107, 383 |
| Fsp4HI | GCNGC | 1 cut(s) | 361 |
| FspBI | CTAG | 1 cut(s) | 406 |
| GluI | GCNGC | 1 cut(s) | 361 |
| GsuI | CTGGAG | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 51 |
| HapII | CCGG | 1 cut(s) | 87 |
| Hin1I | GRCGYC | 1 cut(s) | 21 |
| Hin1II | CATG | 1 cut(s) | 76 |
| HinfI | GANTC | 2 cut(s) | 65, 157 |
| HpaII | CCGG | 1 cut(s) | 87 |
| HphI | GGTGA | 3 cut(s) | 19, 139, 149 |
| Hpy188I | TCNGA | 2 cut(s) | 26, 267 |
| Hpy188III | TCNNGA | 2 cut(s) | 124, 391 |
| Hpy99I | CGWCG | 2 cut(s) | 23, 26 |
| HpyCH4IV | ACGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 3 cut(s) | 248, 260, 380 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 96 |
| HpySE526I | ACGT | 1 cut(s) | 21 |
| Hsp92I | GRCGYC | 1 cut(s) | 21 |
| Hsp92II | CATG | 1 cut(s) | 76 |
| Ksp22I | TGATCA | 1 cut(s) | 228 |
| Kzo9I | GATC | 3 cut(s) | 103, 228, 393 |
| LpnPI | CCDG | 9 cut(s) | 65, 100, 109, 120, 147, 302, 310, 353, 380 |
| Lsp1109I | GCAGC | 1 cut(s) | 372 |
| LweI | GCATC | 1 cut(s) | 300 |
| MaeI | CTAG | 1 cut(s) | 406 |
| MaeII | ACGT | 1 cut(s) | 21 |
| MaeIII | GTNAC | 1 cut(s) | 137 |
| MalI | GATC | 3 cut(s) | 105, 230, 395 |
| MboI | GATC | 3 cut(s) | 103, 228, 393 |
| MboII | GAAGA | 5 cut(s) | 100, 103, 196, 331, 339 |
| MflI | RGATCY | 1 cut(s) | 393 |
| MluCI | AATT | 1 cut(s) | 10 |
| MlyI | GAGTC | 2 cut(s) | 59, 151 |
| MmeI | TCCRAC | 2 cut(s) | 4, 255 |
| MnlI | CCTC | 7 cut(s) | 50, 110, 155, 184, 205, 361, 407 |
| MseI | TTAA | 1 cut(s) | 323 |
| MspI | CCGG | 1 cut(s) | 87 |
| MspR9I | CCNGG | 2 cut(s) | 135, 368 |
| MvaI | CCWGG | 2 cut(s) | 135, 368 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 96 |
| NdeII | GATC | 3 cut(s) | 103, 228, 393 |
| NlaIII | CATG | 1 cut(s) | 76 |
| NlaIV | GGNNCC | 1 cut(s) | 28 |
| NmuCI | GTSAC | 1 cut(s) | 137 |
| NspV | TTCGAA | 1 cut(s) | 199 |
| PfoI | TCCNGGA | 1 cut(s) | 366 |
| PkrI | GCNGC | 1 cut(s) | 362 |
| PleI | GAGTC | 2 cut(s) | 59, 151 |
| PpsI | GAGTC | 2 cut(s) | 59, 151 |
| Psp6I | CCWGG | 2 cut(s) | 133, 366 |
| PspGI | CCWGG | 2 cut(s) | 133, 366 |
| PspN4I | GGNNCC | 1 cut(s) | 28 |
| PspPI | GGNCC | 1 cut(s) | 49 |
| PsuI | RGATCY | 1 cut(s) | 393 |
| SaqAI | TTAA | 1 cut(s) | 323 |
| SatI | GCNGC | 1 cut(s) | 361 |
| Sau3AI | GATC | 3 cut(s) | 103, 228, 393 |
| Sau96I | GGNCC | 1 cut(s) | 49 |
| SchI | GAGTC | 2 cut(s) | 59, 151 |
| ScrFI | CCNGG | 2 cut(s) | 135, 368 |
| SetI | ASST | 8 cut(s) | 24, 42, 139, 147, 222, 283, 291, 365 |
| SfaNI | GCATC | 1 cut(s) | 300 |
| SfuI | TTCGAA | 1 cut(s) | 199 |
| SmlI | CTYRAG | 1 cut(s) | 389 |
| SmoI | CTYRAG | 1 cut(s) | 389 |
| Sse9I | AATT | 1 cut(s) | 10 |
| SspMI | CTAG | 1 cut(s) | 406 |
| StyD4I | CCNGG | 2 cut(s) | 133, 366 |
| TaiI | ACGT | 1 cut(s) | 24 |
| TaqI | TCGA | 4 cut(s) | 102, 182, 199, 207 |
| TasI | AATT | 1 cut(s) | 10 |
| Tru1I | TTAA | 1 cut(s) | 323 |
| Tru9I | TTAA | 1 cut(s) | 323 |
| TscAI | CASTG | 1 cut(s) | 304 |
| TseFI | GTSAC | 1 cut(s) | 137 |
| TseI | GCWGC | 1 cut(s) | 360 |
| Tsp45I | GTSAC | 1 cut(s) | 137 |
| TspGWI | ACGGA | 1 cut(s) | 71 |
| TspRI | CASTG | 1 cut(s) | 304 |
| XapI | RAATTY | 1 cut(s) | 10 |
| XspI | CTAG | 1 cut(s) | 406 |
| ZraI | GACGTC | 1 cut(s) | 22 |