Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0065551 RchiOBHm_Chr7g0210331 |
| rosa_laevigata | RLG00000013135 |
| rosa_multiflora | Rmu_sc0000573.1_g000032 Rmu_sc0002482.1_g000022 Rmu_sc0002853.1_g000007 Rmu_sc0004465.1_g000025 Rmu_sc0008877.1_g000005 Rmu_sc0012973.1_g000003 Rmu_sc0025057.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086520 Rroxscaffold_3G00227130 Rroxscaffold_5G00377700 |
| rosa_rugosa | Rorug01G0061800 |
| rosa_samantha | Rh1AG059300 Rh1AG069300 Rh1AG241800 Rh1BG052700 Rh1CG225600 Rh1CG299900 Rh2BG263100 Rh2CG584100 Rh3BG245100 Rh4BG041800 Rh5AG536800 Rh6AG270100 Rh6BG090500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 62 |
| AccIII | TCCGGA | 1 cut(s) | 28 |
| AciI | CCGC | 4 cut(s) | 60, 68, 205, 214 |
| AcoI | YGGCCR | 1 cut(s) | 285 |
| AcsI | RAATTY | 1 cut(s) | 130 |
| AdeI | CACNNNGTG | 1 cut(s) | 252 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 98, 124, 166 |
| AgsI | TTSAA | 1 cut(s) | 136 |
| Aor13HI | TCCGGA | 1 cut(s) | 28 |
| AoxI | GGCC | 1 cut(s) | 285 |
| ApoI | RAATTY | 1 cut(s) | 130 |
| AspS9I | GGNCC | 2 cut(s) | 23, 115 |
| AsuHPI | GGTGA | 4 cut(s) | 39, 88, 139, 256 |
| AvaII | GGWCC | 2 cut(s) | 23, 115 |
| BaeGI | GKGCMC | 1 cut(s) | 173 |
| BccI | CCATC | 2 cut(s) | 101, 263 |
| Bme18I | GGWCC | 2 cut(s) | 23, 115 |
| BmgT120I | GGNCC | 2 cut(s) | 23, 115 |
| BmiI | GGNNCC | 3 cut(s) | 6, 117, 148 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 169, 201 |
| BsaWI | WCCGGW | 1 cut(s) | 28 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 46, 49, 76, 79 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 98, 124, 166 |
| Bse118I | RCCGGY | 2 cut(s) | 98, 287 |
| BseAI | TCCGGA | 1 cut(s) | 28 |
| BseGI | GGATG | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 98, 124, 166 |
| BseRI | GAGGAG | 1 cut(s) | 54 |
| BseSI | GKGCMC | 1 cut(s) | 173 |
| BshFI | GGCC | 1 cut(s) | 287 |
| BsiSI | CCGG | 3 cut(s) | 29, 99, 288 |
| BslFI | GGGAC | 1 cut(s) | 286 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 98, 124, 166 |
| BsmFI | GGGAC | 1 cut(s) | 286 |
| BsnI | GGCC | 1 cut(s) | 287 |
| Bsp1286I | GDGCHC | 1 cut(s) | 173 |
| Bsp13I | TCCGGA | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 220 |
| BspACI | CCGC | 4 cut(s) | 60, 68, 205, 214 |
| BspANI | GGCC | 1 cut(s) | 287 |
| BspEI | TCCGGA | 1 cut(s) | 28 |
| BspLI | GGNNCC | 3 cut(s) | 6, 117, 148 |
| BsrBI | CCGCTC | 1 cut(s) | 62 |
| BsrFI | RCCGGY | 2 cut(s) | 98, 287 |
| BssAI | RCCGGY | 2 cut(s) | 98, 287 |
| BssMI | GATC | 1 cut(s) | 220 |
| Bst6I | CTCTTC | 1 cut(s) | 230 |
| BstF5I | GGATG | 1 cut(s) | 237 |
| BstKTI | GATC | 1 cut(s) | 223 |
| BstMBI | GATC | 1 cut(s) | 220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 213 |
| BstSLI | GKGCMC | 1 cut(s) | 173 |
| BsuRI | GGCC | 1 cut(s) | 287 |
| BtsCI | GGATG | 1 cut(s) | 237 |
| Cfr10I | RCCGGY | 2 cut(s) | 98, 287 |
| Cfr13I | GGNCC | 2 cut(s) | 23, 115 |
| CviAII | CATG | 2 cut(s) | 155, 191 |
| CviJI | RGCY | 3 cut(s) | 5, 287, 305 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 287, 305 |
| DpnI | GATC | 1 cut(s) | 222 |
| DpnII | GATC | 1 cut(s) | 220 |
| DraIII | CACNNNGTG | 1 cut(s) | 252 |
| EaeI | YGGCCR | 1 cut(s) | 285 |
| Eam1104I | CTCTTC | 1 cut(s) | 230 |
| EarI | CTCTTC | 1 cut(s) | 230 |
| EciI | GGCGGA | 1 cut(s) | 57 |
| Eco47I | GGWCC | 2 cut(s) | 23, 115 |
| FaeI | CATG | 2 cut(s) | 158, 194 |
| FaiI | YATR | 2 cut(s) | 156, 192 |
| FaqI | GGGAC | 1 cut(s) | 286 |
| FatI | CATG | 2 cut(s) | 154, 190 |
| FauI | CCCGC | 1 cut(s) | 221 |
| FokI | GGATG | 1 cut(s) | 224 |
| HaeIII | GGCC | 1 cut(s) | 287 |
| HapII | CCGG | 3 cut(s) | 29, 99, 288 |
| Hin1II | CATG | 2 cut(s) | 158, 194 |
| HinfI | GANTC | 2 cut(s) | 184, 274 |
| HpaII | CCGG | 3 cut(s) | 29, 99, 288 |
| HphI | GGTGA | 4 cut(s) | 39, 88, 139, 256 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 4 cut(s) | 11, 29, 241, 336 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| Hpy99I | CGWCG | 2 cut(s) | 146, 178 |
| HpyAV | CCTTC | 1 cut(s) | 118 |
| HpyCH4IV | ACGT | 1 cut(s) | 141 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 213 |
| HpySE526I | ACGT | 1 cut(s) | 141 |
| Hsp92II | CATG | 2 cut(s) | 158, 194 |
| Kpn2I | TCCGGA | 1 cut(s) | 28 |
| Kzo9I | GATC | 1 cut(s) | 220 |
| LmnI | GCTCC | 2 cut(s) | 10, 67 |
| LpnPI | CCDG | 3 cut(s) | 42, 112, 301 |
| MaeII | ACGT | 1 cut(s) | 141 |
| MaeIII | GTNAC | 1 cut(s) | 322 |
| MalI | GATC | 1 cut(s) | 222 |
| MbiI | CCGCTC | 1 cut(s) | 62 |
| MboI | GATC | 1 cut(s) | 220 |
| MboII | GAAGA | 4 cut(s) | 217, 220, 300, 324 |
| MhlI | GDGCHC | 1 cut(s) | 173 |
| MluCI | AATT | 1 cut(s) | 130 |
| MlyI | GAGTC | 2 cut(s) | 178, 268 |
| MmeI | TCCRAC | 1 cut(s) | 124 |
| MnlI | CCTC | 7 cut(s) | 18, 36, 55, 75, 170, 227, 272 |
| MroI | TCCGGA | 1 cut(s) | 28 |
| MspI | CCGG | 3 cut(s) | 29, 99, 288 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 213 |
| NdeII | GATC | 1 cut(s) | 220 |
| NlaIII | CATG | 2 cut(s) | 158, 194 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 117, 148 |
| NmuCI | GTSAC | 1 cut(s) | 322 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 179 |
| PleI | GAGTC | 2 cut(s) | 178, 268 |
| PpsI | GAGTC | 2 cut(s) | 178, 268 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 117, 148 |
| PspPI | GGNCC | 2 cut(s) | 23, 115 |
| Sau3AI | GATC | 1 cut(s) | 220 |
| Sau96I | GGNCC | 2 cut(s) | 23, 115 |
| SchI | GAGTC | 2 cut(s) | 178, 268 |
| SduI | GDGCHC | 1 cut(s) | 173 |
| SetI | ASST | 3 cut(s) | 144, 162, 264 |
| SgrAI | CRCCGGYG | 1 cut(s) | 98 |
| SinI | GGWCC | 2 cut(s) | 23, 115 |
| Sse9I | AATT | 1 cut(s) | 130 |
| SsiI | CCGC | 4 cut(s) | 60, 68, 205, 214 |
| TaiI | ACGT | 1 cut(s) | 144 |
| TaqI | TCGA | 1 cut(s) | 219 |
| TaqII | GACCGA | 1 cut(s) | 11 |
| TasI | AATT | 1 cut(s) | 130 |
| TseFI | GTSAC | 1 cut(s) | 322 |
| Tsp45I | GTSAC | 1 cut(s) | 322 |
| TspGWI | ACGGA | 1 cut(s) | 240 |
| VpaK11BI | GGWCC | 2 cut(s) | 23, 115 |
| XapI | RAATTY | 1 cut(s) | 130 |