Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0065551 RchiOBHm_Chr7g0210331 |
| rosa_laevigata | RLG00000013135 |
| rosa_multiflora | Rmu_sc0000573.1_g000032 Rmu_sc0002482.1_g000022 Rmu_sc0002853.1_g000007 Rmu_sc0004465.1_g000025 Rmu_sc0008877.1_g000005 Rmu_sc0012973.1_g000003 Rmu_sc0025057.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086520 Rroxscaffold_3G00227130 Rroxscaffold_5G00377700 |
| rosa_rugosa | Rorug01G0061800 |
| rosa_samantha | Rh1AG059300 Rh1AG069300 Rh1AG241800 Rh1BG052700 Rh1CG225600 Rh1CG299900 Rh2BG263100 Rh2CG584100 Rh3BG245100 Rh4BG041800 Rh5AG536800 Rh6AG270100 Rh6BG090500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 24 |
| AcsI | RAATTY | 1 cut(s) | 10 |
| AcyI | GRCGYC | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 46 |
| AgsI | TTSAA | 1 cut(s) | 16 |
| AjiI | CACGTC | 1 cut(s) | 149 |
| AjnI | CCWGG | 1 cut(s) | 133 |
| AluBI | AGCT | 1 cut(s) | 189 |
| AluI | AGCT | 1 cut(s) | 189 |
| AoxI | GGCC | 2 cut(s) | 49, 210 |
| ApoI | RAATTY | 1 cut(s) | 10 |
| AspS9I | GGNCC | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| BccI | CCATC | 1 cut(s) | 153 |
| BciT130I | CCWGG | 1 cut(s) | 135 |
| BfaI | CTAG | 1 cut(s) | 200 |
| BfmI | CTRYAG | 1 cut(s) | 245 |
| Bme1390I | CCNGG | 1 cut(s) | 135 |
| BmgBI | CACGTC | 1 cut(s) | 149 |
| BmgT120I | GGNCC | 1 cut(s) | 49 |
| BmiI | GGNNCC | 1 cut(s) | 28 |
| BmrFI | CCNGG | 1 cut(s) | 135 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 50, 82 |
| BpmI | CTGGAG | 1 cut(s) | 117 |
| BpuEI | CTTGAG | 1 cut(s) | 205 |
| BsaHI | GRCGYC | 1 cut(s) | 21 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 46 |
| Bse118I | RCCGGY | 1 cut(s) | 86 |
| Bse3DI | GCAATG | 1 cut(s) | 219 |
| BseBI | CCWGG | 1 cut(s) | 135 |
| BseGI | GGATG | 2 cut(s) | 120, 173 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BseMI | GCAATG | 1 cut(s) | 219 |
| BshFI | GGCC | 2 cut(s) | 51, 212 |
| BsiSI | CCGG | 1 cut(s) | 87 |
| BslFI | GGGAC | 1 cut(s) | 176 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BsmFI | GGGAC | 1 cut(s) | 176 |
| BsnI | GGCC | 2 cut(s) | 51, 212 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| BspANI | GGCC | 2 cut(s) | 51, 212 |
| BspLI | GGNNCC | 1 cut(s) | 28 |
| BsrDI | GCAATG | 1 cut(s) | 219 |
| BsrFI | RCCGGY | 1 cut(s) | 86 |
| BssAI | RCCGGY | 1 cut(s) | 86 |
| BssMI | GATC | 1 cut(s) | 103 |
| BssNI | GRCGYC | 1 cut(s) | 21 |
| Bst2UI | CCWGG | 1 cut(s) | 135 |
| Bst6I | CTCTTC | 2 cut(s) | 113, 201 |
| BstACI | GRCGYC | 1 cut(s) | 21 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 96 |
| BstF5I | GGATG | 2 cut(s) | 120, 173 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 96, 209 |
| BstNI | CCWGG | 1 cut(s) | 135 |
| BstSCI | CCNGG | 1 cut(s) | 133 |
| BstSFI | CTRYAG | 1 cut(s) | 245 |
| BsuRI | GGCC | 2 cut(s) | 51, 212 |
| BtrI | CACGTC | 1 cut(s) | 149 |
| BtsCI | GGATG | 2 cut(s) | 120, 173 |
| Cfr10I | RCCGGY | 1 cut(s) | 86 |
| Cfr13I | GGNCC | 1 cut(s) | 49 |
| CviAII | CATG | 1 cut(s) | 35 |
| CviJI | RGCY | 5 cut(s) | 51, 189, 212, 264, 276 |
| CviKI_1 | RGCY | 5 cut(s) | 51, 189, 212, 264, 276 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| Eam1104I | CTCTTC | 2 cut(s) | 113, 201 |
| EarI | CTCTTC | 2 cut(s) | 113, 201 |
| Eco147I | AGGCCT | 1 cut(s) | 212 |
| EcoRII | CCWGG | 1 cut(s) | 133 |
| FaeI | CATG | 1 cut(s) | 38 |
| FaiI | YATR | 3 cut(s) | 36, 232, 234 |
| FaqI | GGGAC | 1 cut(s) | 176 |
| FatI | CATG | 1 cut(s) | 34 |
| FokI | GGATG | 2 cut(s) | 107, 160 |
| FspBI | CTAG | 1 cut(s) | 200 |
| GsuI | CTGGAG | 1 cut(s) | 117 |
| HaeIII | GGCC | 2 cut(s) | 51, 212 |
| HapII | CCGG | 1 cut(s) | 87 |
| Hin1I | GRCGYC | 1 cut(s) | 21 |
| Hin1II | CATG | 1 cut(s) | 38 |
| HinfI | GANTC | 2 cut(s) | 65, 164 |
| HpaII | CCGG | 1 cut(s) | 87 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 1 cut(s) | 26 |
| Hpy99I | CGWCG | 2 cut(s) | 23, 26 |
| HpyCH4IV | ACGT | 3 cut(s) | 21, 74, 148 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 96, 209 |
| HpySE526I | ACGT | 3 cut(s) | 21, 74, 148 |
| Hsp92I | GRCGYC | 1 cut(s) | 21 |
| Hsp92II | CATG | 1 cut(s) | 38 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| LpnPI | CCDG | 7 cut(s) | 100, 109, 120, 147, 192, 233, 245 |
| MaeI | CTAG | 1 cut(s) | 200 |
| MaeII | ACGT | 3 cut(s) | 21, 74, 148 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MboII | GAAGA | 3 cut(s) | 100, 103, 218 |
| MluCI | AATT | 1 cut(s) | 10 |
| MlyI | GAGTC | 2 cut(s) | 59, 158 |
| MmeI | TCCRAC | 1 cut(s) | 4 |
| MnlI | CCTC | 7 cut(s) | 50, 110, 154, 162, 202, 223, 247 |
| MspI | CCGG | 1 cut(s) | 87 |
| MspR9I | CCNGG | 1 cut(s) | 135 |
| MvaI | CCWGG | 1 cut(s) | 135 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 96, 209 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 1 cut(s) | 38 |
| NlaIV | GGNNCC | 1 cut(s) | 28 |
| PceI | AGGCCT | 1 cut(s) | 212 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 154 |
| PleI | GAGTC | 2 cut(s) | 59, 158 |
| PpsI | GAGTC | 2 cut(s) | 59, 158 |
| Psp6I | CCWGG | 1 cut(s) | 133 |
| PspGI | CCWGG | 1 cut(s) | 133 |
| PspN4I | GGNNCC | 1 cut(s) | 28 |
| PspPI | GGNCC | 1 cut(s) | 49 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| Sau96I | GGNCC | 1 cut(s) | 49 |
| SchI | GAGTC | 2 cut(s) | 59, 158 |
| ScrFI | CCNGG | 1 cut(s) | 135 |
| SetI | ASST | 8 cut(s) | 24, 42, 77, 146, 151, 191, 252, 258 |
| SfcI | CTRYAG | 1 cut(s) | 245 |
| SmlI | CTYRAG | 1 cut(s) | 184 |
| SmoI | CTYRAG | 1 cut(s) | 184 |
| Sse9I | AATT | 1 cut(s) | 10 |
| SseBI | AGGCCT | 1 cut(s) | 212 |
| SspMI | CTAG | 1 cut(s) | 200 |
| StuI | AGGCCT | 1 cut(s) | 212 |
| StyD4I | CCNGG | 1 cut(s) | 133 |
| TaiI | ACGT | 3 cut(s) | 24, 77, 151 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TasI | AATT | 1 cut(s) | 10 |
| XapI | RAATTY | 1 cut(s) | 10 |
| XspI | CTAG | 1 cut(s) | 200 |
| ZraI | GACGTC | 1 cut(s) | 22 |