Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0065551 RchiOBHm_Chr7g0210331 |
| rosa_laevigata | RLG00000013135 |
| rosa_multiflora | Rmu_sc0000573.1_g000032 Rmu_sc0002482.1_g000022 Rmu_sc0002853.1_g000007 Rmu_sc0004465.1_g000025 Rmu_sc0008877.1_g000005 Rmu_sc0012973.1_g000003 Rmu_sc0025057.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086520 Rroxscaffold_3G00227130 Rroxscaffold_5G00377700 |
| rosa_rugosa | Rorug01G0061800 |
| rosa_samantha | Rh1AG059300 Rh1AG069300 Rh1AG241800 Rh1BG052700 Rh1CG225600 Rh1CG299900 Rh2BG263100 Rh2CG584100 Rh3BG245100 Rh4BG041800 Rh5AG536800 Rh6AG270100 Rh6BG090500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 123 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 55 |
| AgsI | TTSAA | 1 cut(s) | 25 |
| AluBI | AGCT | 1 cut(s) | 145 |
| AluI | AGCT | 1 cut(s) | 145 |
| AoxI | GGCC | 2 cut(s) | 123, 153 |
| ApeKI | GCWGC | 1 cut(s) | 142 |
| BanII | GRGCYC | 1 cut(s) | 62 |
| BbvI | GCAGC | 1 cut(s) | 154 |
| BccI | CCATC | 1 cut(s) | 49 |
| BfaI | CTAG | 1 cut(s) | 157 |
| BisI | GCNGC | 1 cut(s) | 143 |
| BlsI | GCNGC | 1 cut(s) | 144 |
| BmiI | GGNNCC | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 1 cut(s) | 39 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 55 |
| BseDI | CCNNGG | 1 cut(s) | 39 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 55 |
| BseX3I | CGGCCG | 1 cut(s) | 123 |
| BseXI | GCAGC | 1 cut(s) | 154 |
| Bsh1285I | CGRYCG | 1 cut(s) | 126 |
| BshFI | GGCC | 2 cut(s) | 125, 155 |
| BsiEI | CGRYCG | 1 cut(s) | 126 |
| BsiSI | CCGG | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 55 |
| BsmI | GAATGC | 1 cut(s) | 76 |
| BsnI | GGCC | 2 cut(s) | 125, 155 |
| Bsp1286I | GDGCHC | 1 cut(s) | 62 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspANI | GGCC | 2 cut(s) | 125, 155 |
| BspLI | GGNNCC | 1 cut(s) | 37 |
| BssECI | CCNNGG | 1 cut(s) | 39 |
| BssMI | GATC | 1 cut(s) | 91 |
| BssT1I | CCWWGG | 1 cut(s) | 39 |
| Bst6I | CTCTTC | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstMCI | CGRYCG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 1 cut(s) | 154 |
| BstZI | CGGCCG | 1 cut(s) | 123 |
| BsuRI | GGCC | 2 cut(s) | 125, 155 |
| CviJI | RGCY | 4 cut(s) | 60, 125, 145, 155 |
| CviKI_1 | RGCY | 4 cut(s) | 60, 125, 145, 155 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| EaeI | YGGCCR | 1 cut(s) | 123 |
| EagI | CGGCCG | 1 cut(s) | 123 |
| Eam1104I | CTCTTC | 1 cut(s) | 101 |
| EarI | CTCTTC | 1 cut(s) | 101 |
| EclXI | CGGCCG | 1 cut(s) | 123 |
| Eco130I | CCWWGG | 1 cut(s) | 39 |
| Eco147I | AGGCCT | 1 cut(s) | 155 |
| Eco24I | GRGCYC | 1 cut(s) | 62 |
| Eco52I | CGGCCG | 1 cut(s) | 123 |
| EcoT14I | CCWWGG | 1 cut(s) | 39 |
| EcoT38I | GRGCYC | 1 cut(s) | 62 |
| ErhI | CCWWGG | 1 cut(s) | 39 |
| FaiI | YATR | 1 cut(s) | 105 |
| Fnu4HI | GCNGC | 1 cut(s) | 143 |
| FriOI | GRGCYC | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 1 cut(s) | 143 |
| FspBI | CTAG | 1 cut(s) | 157 |
| GluI | GCNGC | 1 cut(s) | 143 |
| HaeIII | GGCC | 2 cut(s) | 125, 155 |
| HapII | CCGG | 1 cut(s) | 122 |
| HpaII | CCGG | 1 cut(s) | 122 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy99I | CGWCG | 1 cut(s) | 67 |
| HpyCH4IV | ACGT | 1 cut(s) | 30 |
| HpySE526I | ACGT | 1 cut(s) | 30 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LmnI | GCTCC | 1 cut(s) | 150 |
| LpnPI | CCDG | 1 cut(s) | 135 |
| Lsp1109I | GCAGC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 157 |
| MaeII | ACGT | 1 cut(s) | 30 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 1 cut(s) | 88 |
| MhlI | GDGCHC | 1 cut(s) | 62 |
| MluCI | AATT | 1 cut(s) | 19 |
| MmeI | TCCRAC | 1 cut(s) | 93 |
| MspI | CCGG | 1 cut(s) | 122 |
| Mva1269I | GAATGC | 1 cut(s) | 76 |
| NdeII | GATC | 1 cut(s) | 91 |
| NlaIV | GGNNCC | 1 cut(s) | 37 |
| PceI | AGGCCT | 1 cut(s) | 155 |
| PctI | GAATGC | 1 cut(s) | 76 |
| PkrI | GCNGC | 1 cut(s) | 144 |
| PspN4I | GGNNCC | 1 cut(s) | 37 |
| SatI | GCNGC | 1 cut(s) | 143 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| SduI | GDGCHC | 1 cut(s) | 62 |
| SetI | ASST | 4 cut(s) | 33, 51, 135, 147 |
| SgeI | CNNG | 8 cut(s) | 22, 43, 52, 73, 101, 121, 134, 151 |
| Sse9I | AATT | 1 cut(s) | 19 |
| SseBI | AGGCCT | 1 cut(s) | 155 |
| SspMI | CTAG | 1 cut(s) | 157 |
| StuI | AGGCCT | 1 cut(s) | 155 |
| StyI | CCWWGG | 1 cut(s) | 39 |
| TaiI | ACGT | 1 cut(s) | 33 |
| TaqI | TCGA | 2 cut(s) | 62, 90 |
| TasI | AATT | 1 cut(s) | 19 |
| TseI | GCWGC | 1 cut(s) | 142 |
| TspGWI | ACGGA | 1 cut(s) | 80 |
| XspI | CTAG | 1 cut(s) | 157 |