Coiled-coil domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55830 AT1G55830 AT1G55830 |
| fragaria_vesca | FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 |
| malus_domestica | MD03G1032000.v1.1 MD03G1032400.v1.1 MD11G1036100.v1.1 |
| prunus_persica | Prupe.6G026900_v2.0.a1 Prupe.6G026900_v2.0.a1 |
| pyrus_communis | pycom11g02980 |
| rosa_chinensis | RchiOBHm_Chr5g0075911 |
| rosa_laevigata | RLG00000009357 RLG00000036601 |
| rosa_multiflora | Rmu_sc0002652.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00005770 Rroxscaffold_3G00229030 Rroxscaffold_4G00290220 Rroxscaffold_4G00331910 |
| rosa_rugosa | Rorug01G0374500 Rorug05G0443700 Rorug05G0443800 Rorug05G0443900 |
| rosa_samantha | Rh1BG347000 Rh2DG366700 Rh5AG500500 Rh5BG521600 Rh5CG545600 Rh5DG534400 |
| rosa_wichuraiana | Rw5G046450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 745 |
| Acc36I | ACCTGC | 1 cut(s) | 745 |
| AciI | CCGC | 3 cut(s) | 114, 426, 723 |
| AclWI | GGATC | 2 cut(s) | 227, 984 |
| AcoI | YGGCCR | 2 cut(s) | 93, 115 |
| AcsI | RAATTY | 3 cut(s) | 458, 728, 1245 |
| AcuI | CTGAAG | 5 cut(s) | 297, 504, 630, 827, 1085 |
| AfaI | GTAC | 1 cut(s) | 1388 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| AflIII | ACRYGT | 1 cut(s) | 66 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 70 |
| AjiI | CACGTC | 2 cut(s) | 67, 247 |
| AjnI | CCWGG | 4 cut(s) | 332, 1091, 1260, 1404 |
| Alw26I | GTCTC | 3 cut(s) | 75, 109, 842 |
| AlwI | GGATC | 2 cut(s) | 227, 984 |
| AoxI | GGCC | 3 cut(s) | 93, 115, 815 |
| ApeKI | GCWGC | 3 cut(s) | 541, 988, 1313 |
| ApoI | RAATTY | 3 cut(s) | 458, 728, 1245 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1245 |
| AspA2I | CCTAGG | 1 cut(s) | 778 |
| AspS9I | GGNCC | 2 cut(s) | 55, 443 |
| AsuC2I | CCSGG | 2 cut(s) | 217, 240 |
| AsuHPI | GGTGA | 3 cut(s) | 440, 485, 515 |
| AsuII | TTCGAA | 1 cut(s) | 940 |
| AsuNHI | GCTAGC | 1 cut(s) | 1309 |
| AvaII | GGWCC | 2 cut(s) | 55, 443 |
| AvrII | CCTAGG | 1 cut(s) | 778 |
| BauI | CACGAG | 2 cut(s) | 286, 1229 |
| BbvI | GCAGC | 3 cut(s) | 528, 1000, 1325 |
| BccI | CCATC | 3 cut(s) | 280, 628, 1143 |
| BciT130I | CCWGG | 4 cut(s) | 334, 1093, 1262, 1406 |
| BciVI | GTATCC | 2 cut(s) | 279, 586 |
| BcnI | CCSGG | 2 cut(s) | 217, 240 |
| BcoDI | GTCTC | 3 cut(s) | 75, 109, 842 |
| BfaI | CTAG | 5 cut(s) | 779, 980, 1221, 1310, 1391 |
| BfuAI | ACCTGC | 1 cut(s) | 745 |
| BfuI | GTATCC | 2 cut(s) | 279, 586 |
| BglII | AGATCT | 3 cut(s) | 584, 1010, 1357 |
| BisI | GCNGC | 4 cut(s) | 115, 542, 989, 1314 |
| BlnI | CCTAGG | 1 cut(s) | 778 |
| BlsI | GCNGC | 4 cut(s) | 116, 543, 990, 1315 |
| Bme1390I | CCNGG | 6 cut(s) | 217, 240, 334, 1093, 1262, 1406 |
| Bme18I | GGWCC | 2 cut(s) | 55, 443 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 70 |
| BmgBI | CACGTC | 2 cut(s) | 67, 247 |
| BmgT120I | GGNCC | 2 cut(s) | 55, 443 |
| BmiI | GGNNCC | 4 cut(s) | 56, 57, 416, 1214 |
| BmrFI | CCNGG | 6 cut(s) | 217, 240, 334, 1093, 1262, 1406 |
| BmsI | GCATC | 7 cut(s) | 499, 517, 751, 862, 1010, 1177, 1233 |
| BmtI | GCTAGC | 1 cut(s) | 1313 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 823, 855 |
| BpmI | CTGGAG | 1 cut(s) | 1388 |
| Bpu14I | TTCGAA | 1 cut(s) | 940 |
| BpuEI | CTTGAG | 2 cut(s) | 641, 1382 |
| BpuMI | CCSGG | 2 cut(s) | 217, 240 |
| BsaBI | GATNNNNATC | 2 cut(s) | 531, 714 |
| BsaI | GGTCTC | 2 cut(s) | 75, 109 |
| BsaJI | CCNNGG | 5 cut(s) | 229, 238, 778, 1092, 1317 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 839, 869, 1088, 1118, 1370, 1400 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| Bse118I | RCCGGY | 1 cut(s) | 91 |
| Bse1I | ACTGG | 3 cut(s) | 118, 187, 1002 |
| Bse3DI | GCAATG | 1 cut(s) | 412 |
| Bse8I | GATNNNNATC | 2 cut(s) | 531, 714 |
| BseBI | CCWGG | 4 cut(s) | 334, 1093, 1262, 1406 |
| BseDI | CCNNGG | 5 cut(s) | 229, 238, 778, 1092, 1317 |
| BseGI | GGATG | 5 cut(s) | 460, 559, 718, 766, 1224 |
| BseJI | GATNNNNATC | 2 cut(s) | 531, 714 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| BseMI | GCAATG | 1 cut(s) | 412 |
| BseMII | CTCAG | 1 cut(s) | 890 |
| BseNI | ACTGG | 3 cut(s) | 118, 187, 1002 |
| BseRI | GAGGAG | 6 cut(s) | 623, 638, 641, 847, 965, 1205 |
| BseXI | GCAGC | 3 cut(s) | 528, 1000, 1325 |
| BsgI | GTGCAG | 1 cut(s) | 879 |
| BshFI | GGCC | 3 cut(s) | 95, 117, 817 |
| BsiSI | CCGG | 5 cut(s) | 14, 45, 92, 216, 240 |
| BslFI | GGGAC | 2 cut(s) | 41, 106 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| BsmAI | GTCTC | 3 cut(s) | 75, 109, 842 |
| BsmFI | GGGAC | 2 cut(s) | 41, 106 |
| BsnI | GGCC | 3 cut(s) | 95, 117, 817 |
| Bso31I | GGTCTC | 2 cut(s) | 75, 109 |
| Bsp119I | TTCGAA | 1 cut(s) | 940 |
| Bsp143I | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| Bsp19I | CCATGG | 1 cut(s) | 1317 |
| BspACI | CCGC | 3 cut(s) | 114, 426, 723 |
| BspANI | GGCC | 3 cut(s) | 95, 117, 817 |
| BspCNI | CTCAG | 1 cut(s) | 889 |
| BspLI | GGNNCC | 4 cut(s) | 56, 57, 416, 1214 |
| BspMI | ACCTGC | 1 cut(s) | 745 |
| BspOI | GCTAGC | 1 cut(s) | 1313 |
| BspPI | GGATC | 2 cut(s) | 227, 984 |
| BspQI | GCTCTTC | 1 cut(s) | 471 |
| BspT104I | TTCGAA | 1 cut(s) | 940 |
| BspTNI | GGTCTC | 2 cut(s) | 75, 109 |
| BsrDI | GCAATG | 1 cut(s) | 412 |
| BsrFI | RCCGGY | 1 cut(s) | 91 |
| BsrI | ACTGG | 3 cut(s) | 118, 187, 1002 |
| BssAI | RCCGGY | 1 cut(s) | 91 |
| BssECI | CCNNGG | 5 cut(s) | 229, 238, 778, 1092, 1317 |
| BssMI | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| BssSI | CACGAG | 2 cut(s) | 286, 1229 |
| BssT1I | CCWWGG | 2 cut(s) | 778, 1317 |
| Bst2BI | CACGAG | 2 cut(s) | 286, 1229 |
| Bst2UI | CCWGG | 4 cut(s) | 334, 1093, 1262, 1406 |
| Bst6I | CTCTTC | 6 cut(s) | 273, 471, 663, 819, 824, 846 |
| BstBI | TTCGAA | 1 cut(s) | 940 |
| BstC8I | GCNNGC | 3 cut(s) | 93, 1203, 1311 |
| BstDEI | CTNAG | 1 cut(s) | 876 |
| BstDSI | CCRYGG | 1 cut(s) | 1317 |
| BstF5I | GGATG | 5 cut(s) | 460, 559, 718, 766, 1224 |
| BstKTI | GATC | 9 cut(s) | 111, 222, 587, 595, 718, 979, 1013, 1038, 1360 |
| BstMAI | GTCTC | 3 cut(s) | 75, 109, 842 |
| BstMBI | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 31, 240, 249, 402, 892, 901, 1319 |
| BstNI | CCWGG | 4 cut(s) | 334, 1093, 1262, 1406 |
| BstSCI | CCNGG | 6 cut(s) | 215, 238, 332, 1091, 1260, 1404 |
| BstV1I | GCAGC | 3 cut(s) | 528, 1000, 1325 |
| BstX2I | RGATCY | 4 cut(s) | 584, 976, 1010, 1357 |
| BstYI | RGATCY | 4 cut(s) | 584, 976, 1010, 1357 |
| BsuI | GTATCC | 2 cut(s) | 279, 586 |
| BsuRI | GGCC | 3 cut(s) | 95, 117, 817 |
| BtgI | CCRYGG | 1 cut(s) | 1317 |
| BtgZI | GCGATG | 1 cut(s) | 118 |
| BtrI | CACGTC | 2 cut(s) | 67, 247 |
| BtsCI | GGATG | 5 cut(s) | 460, 559, 718, 766, 1224 |
| BveI | ACCTGC | 1 cut(s) | 745 |
| Cac8I | GCNNGC | 3 cut(s) | 93, 1203, 1311 |
| Cfr10I | RCCGGY | 1 cut(s) | 91 |
| Cfr13I | GGNCC | 2 cut(s) | 55, 443 |
| Csp6I | GTAC | 1 cut(s) | 1387 |
| CviAII | CATG | 4 cut(s) | 208, 925, 1298, 1318 |
| CviQI | GTAC | 1 cut(s) | 1387 |
| DdeI | CTNAG | 1 cut(s) | 876 |
| DpnI | GATC | 9 cut(s) | 110, 221, 586, 594, 717, 978, 1012, 1037, 1359 |
| DpnII | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| DraI | TTTAAA | 1 cut(s) | 1083 |
| DriI | GACNNNNNGTC | 1 cut(s) | 70 |
| EaeI | YGGCCR | 2 cut(s) | 93, 115 |
| Eam1104I | CTCTTC | 6 cut(s) | 273, 471, 663, 819, 824, 846 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 70 |
| EarI | CTCTTC | 6 cut(s) | 273, 471, 663, 819, 824, 846 |
| Eco130I | CCWWGG | 2 cut(s) | 778, 1317 |
| Eco147I | AGGCCT | 1 cut(s) | 817 |
| Eco31I | GGTCTC | 2 cut(s) | 75, 109 |
| Eco47I | GGWCC | 2 cut(s) | 55, 443 |
| Eco57I | CTGAAG | 5 cut(s) | 297, 504, 630, 827, 1085 |
| EcoO109I | RGGNCCY | 1 cut(s) | 55 |
| EcoRI | GAATTC | 1 cut(s) | 458 |
| EcoRII | CCWGG | 4 cut(s) | 332, 1091, 1260, 1404 |
| EcoT14I | CCWWGG | 2 cut(s) | 778, 1317 |
| ErhI | CCWWGG | 2 cut(s) | 778, 1317 |
| FaeI | CATG | 4 cut(s) | 211, 928, 1301, 1321 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 997, 1029, 1344, 1376 |
| FaqI | GGGAC | 2 cut(s) | 41, 106 |
| FatI | CATG | 4 cut(s) | 207, 924, 1297, 1317 |
| FauI | CCCGC | 1 cut(s) | 730 |
| FauNDI | CATATG | 2 cut(s) | 537, 1144 |
| Fnu4HI | GCNGC | 4 cut(s) | 115, 542, 989, 1314 |
| FokI | GGATG | 5 cut(s) | 467, 566, 705, 773, 1211 |
| Fsp4HI | GCNGC | 4 cut(s) | 115, 542, 989, 1314 |
| FspBI | CTAG | 5 cut(s) | 779, 980, 1221, 1310, 1391 |
| GluI | GCNGC | 4 cut(s) | 115, 542, 989, 1314 |
| GsuI | CTGGAG | 1 cut(s) | 1388 |
| HaeIII | GGCC | 3 cut(s) | 95, 117, 817 |
| HapII | CCGG | 5 cut(s) | 14, 45, 92, 216, 240 |
| Hin1II | CATG | 4 cut(s) | 211, 928, 1301, 1321 |
| HinfI | GANTC | 5 cut(s) | 170, 284, 326, 850, 920 |
| HpaII | CCGG | 5 cut(s) | 14, 45, 92, 216, 240 |
| HphI | GGTGA | 3 cut(s) | 440, 485, 515 |
| Hpy188III | TCNNGA | 7 cut(s) | 106, 845, 980, 1124, 1250, 1283, 1361 |
| Hpy99I | CGWCG | 5 cut(s) | 68, 151, 182, 248, 1284 |
| HpyAV | CCTTC | 1 cut(s) | 807 |
| HpyCH4IV | ACGT | 4 cut(s) | 66, 195, 246, 1279 |
| HpyCH4V | TGCA | 3 cut(s) | 860, 1190, 1340 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 31, 240, 249, 402, 892, 901, 1319 |
| HpyF3I | CTNAG | 1 cut(s) | 876 |
| HpySE526I | ACGT | 4 cut(s) | 66, 195, 246, 1279 |
| Hsp92II | CATG | 4 cut(s) | 211, 928, 1301, 1321 |
| KflI | GGGWCCC | 1 cut(s) | 55 |
| KroI | GCCGGC | 1 cut(s) | 91 |
| KroNI | GCCGGC | 1 cut(s) | 93 |
| Kzo9I | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| LguI | GCTCTTC | 1 cut(s) | 471 |
| LmnI | GCTCC | 6 cut(s) | 39, 168, 891, 1096, 1218, 1329 |
| Lsp1109I | GCAGC | 3 cut(s) | 528, 1000, 1325 |
| LweI | GCATC | 7 cut(s) | 499, 517, 751, 862, 1010, 1177, 1233 |
| MaeI | CTAG | 5 cut(s) | 779, 980, 1221, 1310, 1391 |
| MaeII | ACGT | 4 cut(s) | 66, 195, 246, 1279 |
| MaeIII | GTNAC | 1 cut(s) | 792 |
| MalI | GATC | 9 cut(s) | 110, 221, 586, 594, 717, 978, 1012, 1037, 1359 |
| MboI | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| MflI | RGATCY | 4 cut(s) | 584, 976, 1010, 1357 |
| MluCI | AATT | 7 cut(s) | 458, 650, 728, 785, 936, 1114, 1245 |
| MlyI | GAGTC | 3 cut(s) | 278, 335, 844 |
| MmeI | TCCRAC | 1 cut(s) | 179 |
| MroNI | GCCGGC | 1 cut(s) | 91 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1245 |
| MseI | TTAA | 4 cut(s) | 683, 747, 1082, 1334 |
| MspA1I | CMGCKG | 1 cut(s) | 725 |
| MspI | CCGG | 5 cut(s) | 14, 45, 92, 216, 240 |
| MspR9I | CCNGG | 6 cut(s) | 217, 240, 334, 1093, 1262, 1406 |
| MvaI | CCWGG | 4 cut(s) | 334, 1093, 1262, 1406 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 31, 240, 249, 402, 892, 901, 1319 |
| NaeI | GCCGGC | 1 cut(s) | 93 |
| NciI | CCSGG | 2 cut(s) | 217, 240 |
| NcoI | CCATGG | 1 cut(s) | 1317 |
| NdeI | CATATG | 2 cut(s) | 537, 1144 |
| NdeII | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| NgoMIV | GCCGGC | 1 cut(s) | 91 |
| NheI | GCTAGC | 1 cut(s) | 1309 |
| NlaIII | CATG | 4 cut(s) | 211, 928, 1301, 1321 |
| NlaIV | GGNNCC | 4 cut(s) | 56, 57, 416, 1214 |
| NmeAIII | GCCGAG | 1 cut(s) | 210 |
| NmuCI | GTSAC | 1 cut(s) | 792 |
| NspV | TTCGAA | 1 cut(s) | 940 |
| PaqCI | CACCTGC | 1 cut(s) | 745 |
| PceI | AGGCCT | 1 cut(s) | 817 |
| PciSI | GCTCTTC | 1 cut(s) | 471 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 72, 152 |
| PdiI | GCCGGC | 1 cut(s) | 93 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1245 |
| PfeI | GAWTC | 2 cut(s) | 170, 920 |
| PfoI | TCCNGGA | 3 cut(s) | 215, 332, 1404 |
| PkrI | GCNGC | 4 cut(s) | 116, 543, 990, 1315 |
| PleI | GAGTC | 3 cut(s) | 278, 334, 844 |
| PpsI | GAGTC | 3 cut(s) | 278, 334, 844 |
| PpuMI | RGGWCCY | 1 cut(s) | 55 |
| Psp5II | RGGWCCY | 1 cut(s) | 55 |
| Psp6I | CCWGG | 4 cut(s) | 332, 1091, 1260, 1404 |
| PspGI | CCWGG | 4 cut(s) | 332, 1091, 1260, 1404 |
| PspN4I | GGNNCC | 4 cut(s) | 56, 57, 416, 1214 |
| PspPI | GGNCC | 2 cut(s) | 55, 443 |
| PspPPI | RGGWCCY | 1 cut(s) | 55 |
| PsuI | RGATCY | 4 cut(s) | 584, 976, 1010, 1357 |
| RsaI | GTAC | 1 cut(s) | 1388 |
| RsaNI | GTAC | 1 cut(s) | 1387 |
| SapI | GCTCTTC | 1 cut(s) | 471 |
| SaqAI | TTAA | 4 cut(s) | 683, 747, 1082, 1334 |
| SatI | GCNGC | 4 cut(s) | 115, 542, 989, 1314 |
| Sau3AI | GATC | 9 cut(s) | 108, 219, 584, 592, 715, 976, 1010, 1035, 1357 |
| Sau96I | GGNCC | 2 cut(s) | 55, 443 |
| SchI | GAGTC | 3 cut(s) | 278, 335, 844 |
| ScrFI | CCNGG | 6 cut(s) | 217, 240, 334, 1093, 1262, 1406 |
| SfaNI | GCATC | 7 cut(s) | 499, 517, 751, 862, 1010, 1177, 1233 |
| SfuI | TTCGAA | 1 cut(s) | 940 |
| SinI | GGWCC | 2 cut(s) | 55, 443 |
| SmlI | CTYRAG | 2 cut(s) | 620, 1361 |
| SmoI | CTYRAG | 2 cut(s) | 620, 1361 |
| Sse9I | AATT | 7 cut(s) | 458, 650, 728, 785, 936, 1114, 1245 |
| SseBI | AGGCCT | 1 cut(s) | 817 |
| SsiI | CCGC | 3 cut(s) | 114, 426, 723 |
| SspMI | CTAG | 5 cut(s) | 779, 980, 1221, 1310, 1391 |
| StuI | AGGCCT | 1 cut(s) | 817 |
| StyD4I | CCNGG | 6 cut(s) | 215, 238, 332, 1091, 1260, 1404 |
| StyI | CCWWGG | 2 cut(s) | 778, 1317 |
| TaiI | ACGT | 4 cut(s) | 69, 198, 249, 1282 |
| TaqI | TCGA | 7 cut(s) | 107, 357, 498, 714, 738, 940, 1282 |
| TaqII | GACCGA | 1 cut(s) | 460 |
| TasI | AATT | 7 cut(s) | 458, 650, 728, 785, 936, 1114, 1245 |
| TauI | GCSGC | 1 cut(s) | 117 |
| TfiI | GAWTC | 2 cut(s) | 170, 920 |
| Tru1I | TTAA | 4 cut(s) | 683, 747, 1082, 1334 |
| Tru9I | TTAA | 4 cut(s) | 683, 747, 1082, 1334 |
| TseFI | GTSAC | 1 cut(s) | 792 |
| TseI | GCWGC | 3 cut(s) | 541, 988, 1313 |
| Tsp45I | GTSAC | 1 cut(s) | 792 |
| TspDTI | ATGAA | 4 cut(s) | 471, 570, 587, 1314 |
| TspGWI | ACGGA | 3 cut(s) | 64, 166, 1342 |
| VpaK11BI | GGWCC | 2 cut(s) | 55, 443 |
| XapI | RAATTY | 3 cut(s) | 458, 728, 1245 |
| XbaI | TCTAGA | 1 cut(s) | 979 |
| XmaJI | CCTAGG | 1 cut(s) | 778 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1245 |
| XspI | CTAG | 5 cut(s) | 779, 980, 1221, 1310, 1391 |