Coiled-coil domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55830 AT1G55830 AT1G55830 |
| fragaria_vesca | FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 FvH4_3g42411 |
| malus_domestica | MD03G1032000.v1.1 MD03G1032400.v1.1 MD11G1036100.v1.1 |
| prunus_persica | Prupe.6G026900_v2.0.a1 Prupe.6G026900_v2.0.a1 |
| pyrus_communis | pycom11g02980 |
| rosa_chinensis | RchiOBHm_Chr5g0075911 |
| rosa_laevigata | RLG00000009357 RLG00000036601 |
| rosa_multiflora | Rmu_sc0002652.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00005770 Rroxscaffold_3G00229030 Rroxscaffold_4G00290220 Rroxscaffold_4G00331910 |
| rosa_rugosa | Rorug01G0374500 Rorug05G0443700 Rorug05G0443800 Rorug05G0443900 |
| rosa_samantha | Rh1BG347000 Rh2DG366700 Rh5AG500500 Rh5BG521600 Rh5CG545600 Rh5DG534400 |
| rosa_wichuraiana | Rw5G046450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 114, 426, 681 |
| AclWI | GGATC | 2 cut(s) | 227, 942 |
| AcoI | YGGCCR | 2 cut(s) | 93, 115 |
| AcsI | RAATTY | 3 cut(s) | 458, 686, 1203 |
| AcuI | CTGAAG | 4 cut(s) | 297, 504, 588, 1043 |
| AfaI | GTAC | 1 cut(s) | 1346 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| AflIII | ACRYGT | 1 cut(s) | 66 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 70 |
| AjiI | CACGTC | 2 cut(s) | 67, 247 |
| AjnI | CCWGG | 3 cut(s) | 1049, 1218, 1362 |
| Alw26I | GTCTC | 3 cut(s) | 75, 109, 800 |
| AlwI | GGATC | 2 cut(s) | 227, 942 |
| AoxI | GGCC | 3 cut(s) | 93, 115, 773 |
| ApeKI | GCWGC | 2 cut(s) | 946, 1271 |
| ApoI | RAATTY | 3 cut(s) | 458, 686, 1203 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1203 |
| AspS9I | GGNCC | 2 cut(s) | 55, 443 |
| AsuC2I | CCSGG | 3 cut(s) | 217, 240, 334 |
| AsuHPI | GGTGA | 4 cut(s) | 440, 485, 515, 601 |
| AsuII | TTCGAA | 1 cut(s) | 898 |
| AsuNHI | GCTAGC | 1 cut(s) | 1267 |
| AvaII | GGWCC | 2 cut(s) | 55, 443 |
| AxyI | CCTNAGG | 1 cut(s) | 564 |
| BauI | CACGAG | 2 cut(s) | 286, 1187 |
| BbvI | GCAGC | 2 cut(s) | 958, 1283 |
| BccI | CCATC | 3 cut(s) | 280, 586, 1101 |
| BciT130I | CCWGG | 3 cut(s) | 1051, 1220, 1364 |
| BciVI | GTATCC | 1 cut(s) | 279 |
| BcnI | CCSGG | 3 cut(s) | 217, 240, 334 |
| BcoDI | GTCTC | 3 cut(s) | 75, 109, 800 |
| BfaI | CTAG | 4 cut(s) | 938, 1179, 1268, 1349 |
| BfmI | CTRYAG | 1 cut(s) | 816 |
| BfuI | GTATCC | 1 cut(s) | 279 |
| BglII | AGATCT | 2 cut(s) | 968, 1315 |
| BisI | GCNGC | 3 cut(s) | 115, 947, 1272 |
| BlsI | GCNGC | 3 cut(s) | 116, 948, 1273 |
| Bme1390I | CCNGG | 6 cut(s) | 217, 240, 334, 1051, 1220, 1364 |
| Bme18I | GGWCC | 2 cut(s) | 55, 443 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 70 |
| BmgBI | CACGTC | 2 cut(s) | 67, 247 |
| BmgT120I | GGNCC | 2 cut(s) | 55, 443 |
| BmiI | GGNNCC | 4 cut(s) | 56, 57, 416, 1172 |
| BmrFI | CCNGG | 6 cut(s) | 217, 240, 334, 1051, 1220, 1364 |
| BmsI | GCATC | 6 cut(s) | 499, 709, 820, 968, 1135, 1191 |
| BmtI | GCTAGC | 1 cut(s) | 1271 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 781, 813 |
| BpmI | CTGGAG | 2 cut(s) | 824, 1346 |
| Bpu14I | TTCGAA | 1 cut(s) | 898 |
| BpuEI | CTTGAG | 3 cut(s) | 599, 716, 1340 |
| BpuMI | CCSGG | 3 cut(s) | 217, 240, 334 |
| BsaBI | GATNNNNATC | 1 cut(s) | 672 |
| BsaI | GGTCTC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 5 cut(s) | 229, 238, 736, 1050, 1275 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 797, 827, 1046, 1076 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| Bse118I | RCCGGY | 1 cut(s) | 91 |
| Bse1I | ACTGG | 3 cut(s) | 118, 187, 960 |
| Bse21I | CCTNAGG | 1 cut(s) | 564 |
| Bse3DI | GCAATG | 1 cut(s) | 412 |
| Bse8I | GATNNNNATC | 1 cut(s) | 672 |
| BseBI | CCWGG | 3 cut(s) | 1051, 1220, 1364 |
| BseDI | CCNNGG | 5 cut(s) | 229, 238, 736, 1050, 1275 |
| BseGI | GGATG | 5 cut(s) | 376, 460, 676, 724, 1182 |
| BseJI | GATNNNNATC | 1 cut(s) | 672 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| BseMI | GCAATG | 1 cut(s) | 412 |
| BseMII | CTCAG | 1 cut(s) | 578 |
| BseNI | ACTGG | 3 cut(s) | 118, 187, 960 |
| BseRI | GAGGAG | 5 cut(s) | 596, 599, 805, 923, 1163 |
| BseXI | GCAGC | 2 cut(s) | 958, 1283 |
| BshFI | GGCC | 3 cut(s) | 95, 117, 775 |
| BsiSI | CCGG | 6 cut(s) | 14, 45, 92, 216, 240, 333 |
| BslFI | GGGAC | 2 cut(s) | 41, 106 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 51, 91 |
| BsmAI | GTCTC | 3 cut(s) | 75, 109, 800 |
| BsmFI | GGGAC | 2 cut(s) | 41, 106 |
| BsnI | GGCC | 3 cut(s) | 95, 117, 775 |
| Bso31I | GGTCTC | 1 cut(s) | 75 |
| Bsp119I | TTCGAA | 1 cut(s) | 898 |
| Bsp143I | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| Bsp19I | CCATGG | 1 cut(s) | 1275 |
| BspACI | CCGC | 3 cut(s) | 114, 426, 681 |
| BspANI | GGCC | 3 cut(s) | 95, 117, 775 |
| BspCNI | CTCAG | 1 cut(s) | 577 |
| BspLI | GGNNCC | 4 cut(s) | 56, 57, 416, 1172 |
| BspMAI | CTGCAG | 1 cut(s) | 820 |
| BspOI | GCTAGC | 1 cut(s) | 1271 |
| BspPI | GGATC | 2 cut(s) | 227, 942 |
| BspQI | GCTCTTC | 1 cut(s) | 471 |
| BspT104I | TTCGAA | 1 cut(s) | 898 |
| BspTNI | GGTCTC | 1 cut(s) | 75 |
| BsrDI | GCAATG | 1 cut(s) | 412 |
| BsrFI | RCCGGY | 1 cut(s) | 91 |
| BsrI | ACTGG | 3 cut(s) | 118, 187, 960 |
| BssAI | RCCGGY | 1 cut(s) | 91 |
| BssECI | CCNNGG | 5 cut(s) | 229, 238, 736, 1050, 1275 |
| BssMI | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| BssSI | CACGAG | 2 cut(s) | 286, 1187 |
| BssT1I | CCWWGG | 2 cut(s) | 736, 1275 |
| Bst2BI | CACGAG | 2 cut(s) | 286, 1187 |
| Bst2UI | CCWGG | 3 cut(s) | 1051, 1220, 1364 |
| Bst6I | CTCTTC | 6 cut(s) | 273, 471, 621, 777, 782, 804 |
| BstBI | TTCGAA | 1 cut(s) | 898 |
| BstC8I | GCNNGC | 4 cut(s) | 11, 93, 1161, 1269 |
| BstDEI | CTNAG | 2 cut(s) | 564, 834 |
| BstDSI | CCRYGG | 1 cut(s) | 1275 |
| BstF5I | GGATG | 5 cut(s) | 376, 460, 676, 724, 1182 |
| BstKTI | GATC | 7 cut(s) | 111, 222, 676, 937, 971, 996, 1318 |
| BstMAI | GTCTC | 3 cut(s) | 75, 109, 800 |
| BstMBI | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 31, 240, 249, 402, 850, 859, 1277 |
| BstNI | CCWGG | 3 cut(s) | 1051, 1220, 1364 |
| BstSCI | CCNGG | 6 cut(s) | 215, 238, 332, 1049, 1218, 1362 |
| BstSFI | CTRYAG | 1 cut(s) | 816 |
| BstV1I | GCAGC | 2 cut(s) | 958, 1283 |
| BstX2I | RGATCY | 3 cut(s) | 934, 968, 1315 |
| BstYI | RGATCY | 3 cut(s) | 934, 968, 1315 |
| Bsu36I | CCTNAGG | 1 cut(s) | 564 |
| BsuI | GTATCC | 1 cut(s) | 279 |
| BsuRI | GGCC | 3 cut(s) | 95, 117, 775 |
| BtgI | CCRYGG | 1 cut(s) | 1275 |
| BtgZI | GCGATG | 1 cut(s) | 118 |
| BtrI | CACGTC | 2 cut(s) | 67, 247 |
| BtsCI | GGATG | 5 cut(s) | 376, 460, 676, 724, 1182 |
| Cac8I | GCNNGC | 4 cut(s) | 11, 93, 1161, 1269 |
| Cfr10I | RCCGGY | 1 cut(s) | 91 |
| Cfr13I | GGNCC | 2 cut(s) | 55, 443 |
| Csp6I | GTAC | 1 cut(s) | 1345 |
| CviAII | CATG | 4 cut(s) | 208, 883, 1256, 1276 |
| CviQI | GTAC | 1 cut(s) | 1345 |
| DdeI | CTNAG | 2 cut(s) | 564, 834 |
| DpnI | GATC | 7 cut(s) | 110, 221, 675, 936, 970, 995, 1317 |
| DpnII | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| DraI | TTTAAA | 1 cut(s) | 1041 |
| DriI | GACNNNNNGTC | 1 cut(s) | 70 |
| EaeI | YGGCCR | 2 cut(s) | 93, 115 |
| Eam1104I | CTCTTC | 6 cut(s) | 273, 471, 621, 777, 782, 804 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 70 |
| EarI | CTCTTC | 6 cut(s) | 273, 471, 621, 777, 782, 804 |
| Eco130I | CCWWGG | 2 cut(s) | 736, 1275 |
| Eco147I | AGGCCT | 1 cut(s) | 775 |
| Eco31I | GGTCTC | 1 cut(s) | 75 |
| Eco47I | GGWCC | 2 cut(s) | 55, 443 |
| Eco57I | CTGAAG | 4 cut(s) | 297, 504, 588, 1043 |
| Eco81I | CCTNAGG | 1 cut(s) | 564 |
| EcoO109I | RGGNCCY | 1 cut(s) | 55 |
| EcoRI | GAATTC | 1 cut(s) | 458 |
| EcoRII | CCWGG | 3 cut(s) | 1049, 1218, 1362 |
| EcoT14I | CCWWGG | 2 cut(s) | 736, 1275 |
| ErhI | CCWWGG | 2 cut(s) | 736, 1275 |
| FaeI | CATG | 4 cut(s) | 211, 886, 1259, 1279 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 955, 987, 1302, 1334 |
| FaqI | GGGAC | 2 cut(s) | 41, 106 |
| FatI | CATG | 4 cut(s) | 207, 882, 1255, 1275 |
| FauI | CCCGC | 1 cut(s) | 688 |
| FauNDI | CATATG | 1 cut(s) | 1102 |
| Fnu4HI | GCNGC | 3 cut(s) | 115, 947, 1272 |
| FokI | GGATG | 5 cut(s) | 383, 467, 663, 731, 1169 |
| Fsp4HI | GCNGC | 3 cut(s) | 115, 947, 1272 |
| FspBI | CTAG | 4 cut(s) | 938, 1179, 1268, 1349 |
| GluI | GCNGC | 3 cut(s) | 115, 947, 1272 |
| GsuI | CTGGAG | 2 cut(s) | 824, 1346 |
| HaeIII | GGCC | 3 cut(s) | 95, 117, 775 |
| HapII | CCGG | 6 cut(s) | 14, 45, 92, 216, 240, 333 |
| Hin1II | CATG | 4 cut(s) | 211, 886, 1259, 1279 |
| HinfI | GANTC | 5 cut(s) | 170, 284, 326, 808, 878 |
| HpaII | CCGG | 6 cut(s) | 14, 45, 92, 216, 240, 333 |
| HphI | GGTGA | 4 cut(s) | 440, 485, 515, 601 |
| Hpy188I | TCNGA | 8 cut(s) | 80, 156, 277, 325, 607, 770, 1011, 1098 |
| Hpy188III | TCNNGA | 8 cut(s) | 106, 566, 803, 938, 1082, 1208, 1241, 1319 |
| Hpy99I | CGWCG | 5 cut(s) | 68, 151, 182, 248, 1242 |
| HpyAV | CCTTC | 1 cut(s) | 765 |
| HpyCH4IV | ACGT | 4 cut(s) | 66, 195, 246, 1237 |
| HpyCH4V | TGCA | 4 cut(s) | 534, 818, 1148, 1298 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 31, 240, 249, 402, 850, 859, 1277 |
| HpyF3I | CTNAG | 2 cut(s) | 564, 834 |
| HpySE526I | ACGT | 4 cut(s) | 66, 195, 246, 1237 |
| Hsp92II | CATG | 4 cut(s) | 211, 886, 1259, 1279 |
| KflI | GGGWCCC | 1 cut(s) | 55 |
| KroI | GCCGGC | 1 cut(s) | 91 |
| KroNI | GCCGGC | 1 cut(s) | 93 |
| Kzo9I | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| LguI | GCTCTTC | 1 cut(s) | 471 |
| LmnI | GCTCC | 6 cut(s) | 39, 168, 849, 1054, 1176, 1287 |
| Lsp1109I | GCAGC | 2 cut(s) | 958, 1283 |
| LweI | GCATC | 6 cut(s) | 499, 709, 820, 968, 1135, 1191 |
| MaeI | CTAG | 4 cut(s) | 938, 1179, 1268, 1349 |
| MaeII | ACGT | 4 cut(s) | 66, 195, 246, 1237 |
| MaeIII | GTNAC | 1 cut(s) | 750 |
| MalI | GATC | 7 cut(s) | 110, 221, 675, 936, 970, 995, 1317 |
| MboI | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| MboII | GAAGA | 9 cut(s) | 290, 401, 488, 518, 635, 638, 791, 794, 799 |
| MflI | RGATCY | 3 cut(s) | 934, 968, 1315 |
| MluCI | AATT | 9 cut(s) | 458, 555, 608, 635, 686, 743, 894, 1072, 1203 |
| MlyI | GAGTC | 3 cut(s) | 278, 335, 802 |
| MmeI | TCCRAC | 3 cut(s) | 179, 612, 989 |
| MroNI | GCCGGC | 1 cut(s) | 91 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1203 |
| MseI | TTAA | 5 cut(s) | 558, 641, 705, 1040, 1292 |
| MspA1I | CMGCKG | 1 cut(s) | 683 |
| MspI | CCGG | 6 cut(s) | 14, 45, 92, 216, 240, 333 |
| MspR9I | CCNGG | 6 cut(s) | 217, 240, 334, 1051, 1220, 1364 |
| MvaI | CCWGG | 3 cut(s) | 1051, 1220, 1364 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 31, 240, 249, 402, 850, 859, 1277 |
| NaeI | GCCGGC | 1 cut(s) | 93 |
| NciI | CCSGG | 3 cut(s) | 217, 240, 334 |
| NcoI | CCATGG | 1 cut(s) | 1275 |
| NdeI | CATATG | 1 cut(s) | 1102 |
| NdeII | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| NgoMIV | GCCGGC | 1 cut(s) | 91 |
| NheI | GCTAGC | 1 cut(s) | 1267 |
| NlaIII | CATG | 4 cut(s) | 211, 886, 1259, 1279 |
| NlaIV | GGNNCC | 4 cut(s) | 56, 57, 416, 1172 |
| NmeAIII | GCCGAG | 1 cut(s) | 210 |
| NmuCI | GTSAC | 1 cut(s) | 750 |
| NspV | TTCGAA | 1 cut(s) | 898 |
| PceI | AGGCCT | 1 cut(s) | 775 |
| PciSI | GCTCTTC | 1 cut(s) | 471 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 72, 152 |
| PdiI | GCCGGC | 1 cut(s) | 93 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1203 |
| PfeI | GAWTC | 2 cut(s) | 170, 878 |
| PflFI | GACNNNGTC | 1 cut(s) | 811 |
| PfoI | TCCNGGA | 3 cut(s) | 215, 332, 1362 |
| PkrI | GCNGC | 3 cut(s) | 116, 948, 1273 |
| PleI | GAGTC | 3 cut(s) | 278, 334, 802 |
| PpsI | GAGTC | 3 cut(s) | 278, 334, 802 |
| PpuMI | RGGWCCY | 1 cut(s) | 55 |
| Psp5II | RGGWCCY | 1 cut(s) | 55 |
| Psp6I | CCWGG | 3 cut(s) | 1049, 1218, 1362 |
| PspGI | CCWGG | 3 cut(s) | 1049, 1218, 1362 |
| PspN4I | GGNNCC | 4 cut(s) | 56, 57, 416, 1172 |
| PspPI | GGNCC | 2 cut(s) | 55, 443 |
| PspPPI | RGGWCCY | 1 cut(s) | 55 |
| PstI | CTGCAG | 1 cut(s) | 820 |
| PsuI | RGATCY | 3 cut(s) | 934, 968, 1315 |
| PsyI | GACNNNGTC | 1 cut(s) | 811 |
| RsaI | GTAC | 1 cut(s) | 1346 |
| RsaNI | GTAC | 1 cut(s) | 1345 |
| SapI | GCTCTTC | 1 cut(s) | 471 |
| SaqAI | TTAA | 5 cut(s) | 558, 641, 705, 1040, 1292 |
| SatI | GCNGC | 3 cut(s) | 115, 947, 1272 |
| Sau3AI | GATC | 7 cut(s) | 108, 219, 673, 934, 968, 993, 1315 |
| Sau96I | GGNCC | 2 cut(s) | 55, 443 |
| SchI | GAGTC | 3 cut(s) | 278, 335, 802 |
| ScrFI | CCNGG | 6 cut(s) | 217, 240, 334, 1051, 1220, 1364 |
| SfaNI | GCATC | 6 cut(s) | 499, 709, 820, 968, 1135, 1191 |
| SfcI | CTRYAG | 1 cut(s) | 816 |
| SfuI | TTCGAA | 1 cut(s) | 898 |
| SinI | GGWCC | 2 cut(s) | 55, 443 |
| SmlI | CTYRAG | 3 cut(s) | 578, 695, 1319 |
| SmoI | CTYRAG | 3 cut(s) | 578, 695, 1319 |
| Sse9I | AATT | 9 cut(s) | 458, 555, 608, 635, 686, 743, 894, 1072, 1203 |
| SseBI | AGGCCT | 1 cut(s) | 775 |
| SsiI | CCGC | 3 cut(s) | 114, 426, 681 |
| SspMI | CTAG | 4 cut(s) | 938, 1179, 1268, 1349 |
| StuI | AGGCCT | 1 cut(s) | 775 |
| StyD4I | CCNGG | 6 cut(s) | 215, 238, 332, 1049, 1218, 1362 |
| StyI | CCWWGG | 2 cut(s) | 736, 1275 |
| TaiI | ACGT | 4 cut(s) | 69, 198, 249, 1240 |
| TaqI | TCGA | 5 cut(s) | 107, 357, 672, 898, 1240 |
| TaqII | GACCGA | 1 cut(s) | 460 |
| TasI | AATT | 9 cut(s) | 458, 555, 608, 635, 686, 743, 894, 1072, 1203 |
| TauI | GCSGC | 1 cut(s) | 117 |
| TfiI | GAWTC | 2 cut(s) | 170, 878 |
| Tru1I | TTAA | 5 cut(s) | 558, 641, 705, 1040, 1292 |
| Tru9I | TTAA | 5 cut(s) | 558, 641, 705, 1040, 1292 |
| TseFI | GTSAC | 1 cut(s) | 750 |
| TseI | GCWGC | 2 cut(s) | 946, 1271 |
| Tsp45I | GTSAC | 1 cut(s) | 750 |
| TspDTI | ATGAA | 2 cut(s) | 471, 1272 |
| TspGWI | ACGGA | 3 cut(s) | 64, 166, 1300 |
| Tth111I | GACNNNGTC | 1 cut(s) | 811 |
| VpaK11BI | GGWCC | 2 cut(s) | 55, 443 |
| XapI | RAATTY | 3 cut(s) | 458, 686, 1203 |
| XbaI | TCTAGA | 1 cut(s) | 937 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1203 |
| XspI | CTAG | 4 cut(s) | 938, 1179, 1268, 1349 |