Rroxscaffold_4G00331910

Coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0002738
Physical Location & Seq
Forward (+)
65901693 .. 65906738
5046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00331910.1

Sequence Viewer

Length: 1383 bp
ATGATTCACGACATCACGGCTTCTTGCTCCCATCTCACCGCCGCATCCTCGCCGCTCCCTCACCGCCGCGTCCTCGAAGCTCCCCGTCGCCTCCGCATCGTGGCTGCTCCCCATCACGGACGTATCGGCACGCAAGCATCTCTCCCTCACATCGTCGCGCTCCCCGTCACGGCTCCCCATCTCCGTCCGTCATCGGATACGCAGCCCCGACGTCGATCTACCTATCCGTGTGTCCCTCGTCACATATCGATCTCCGACGCAAGCTCCCCGTCACCGGTCCTCGTCACCGCTCCCACGGATCGATCTCTCTCCGCCAATACACACTCTTCTTTCTTTGAAGCTCAAAAAACACCCGAGAAAATCCCAAATGGAACGCTCGCCGGAAATGCGGTTGAACTCGCTCCACAACTCCGGCGTTCGGGTTCCCTACGACGTGTCGTCCGTCCGAGACCTCACGCCGGCCACTTTAGTCTCGATCGCGGCCGGTCCCTCAACCTCATCGCCCAAACCTCGTCGTTTCCGACCTCGCTCCCCGATTCCTCCGTCGCCGACCGGTTCAACGTACGTATGGACATGGCTTCCGGGATCGACGGCCTCGGCTACCCCGGCGACGTGAGCTTCCACAAGGCGGTTCTTGTATCCATCGAAGAGGACTCGTGTAAGTTGGTGAGGTTCTTGGTGGAGAGGCTTTCGGAGTTGTCCGGGAGTGGAAGCGGGGGTGGTGTCGACGGTGTTGAGGATATGGGGAGAGTGAAAGAAGATAGCTTTGAAAGCAATGTGGAGAACCACGAAGCGGTGATGACGAGACTTGGACCAAAATGGGATGAATTCACATTGAATAGTGAAGAGCACGAAGTATTGAATATCGAGGGTGAAGATGCCTCTGTCGGTTGTGATGCTAATCATATGCTGCGAAGATTGGATGAAATGAGTATTGACAATGTATCCGGCGGTCCGATGACCTTCATTCATCGGAGTGACGGCTGCAGCCGAGCCGGTGCTGGCAGAAAAGACGACGTTGTCCTTGCTTCATCTTTCTTGCCCGACACCTTTAACGTAGAGCAGATTTTTCTGAGGAAAGAAGTCTTACTTTTGGAGTCTCTGTTGGAGATCAGGATTGTGAAGAAGGACGAGCCAGGAATTTCAATGCAGTTGTACTTGGTTCTGGACACACCTGCAAATGGCATAAAGCAATATTGTCAAGTAGATTTTGCAAAGCAACGTAGTAAATATCGAAATTTTGGGTACAGCAAGAAGGAAACTGGGAGAAAAGATGAAATAGACAATTGTTTTGAGCAGGAGATGAATGACAACCAAAAAGATGAAGTGATTTGCCAGGGAAGCAAAAGCATGAAGTGGTCTGCCAGTGATATGGTTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF812

Protein Analysis

460

Amino Acids

50.66

Weight (kDa)

6.26

Isoelectric Point (pI)

52.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCDC22_N PF21674 162 - 231 8.6e-11 CCDC22 protein N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1183
AasI GACNNNNNNGTC 1 cut(s) 1019
AatII GACGTC 1 cut(s) 214
Acc36I ACCTGC 1 cut(s) 1183
AccBSI CCGCTC 2 cut(s) 55, 290
AccI GTMKAC 1 cut(s) 726
AccII CGCG 3 cut(s) 69, 158, 480
AclWI GGATC 2 cut(s) 306, 593
AcoI YGGCCR 2 cut(s) 460, 481
AcsI RAATTY 3 cut(s) 827, 1140, 1237
AcyI GRCGYC 1 cut(s) 211
AfaI GTAC 3 cut(s) 564, 1157, 1247
AfiI CCNNNNNNNGG 9 cut(s) 100, 116, 169, 274, 418, 458, 628, 793, 1181
AflIII ACRYGT 1 cut(s) 433
AgeI ACCGGT 2 cut(s) 274, 552
AgsI TTSAA 7 cut(s) 338, 395, 559, 770, 838, 862, 1146
AhdI GACNNNNNGTC 1 cut(s) 437
AjiI CACGTC 2 cut(s) 434, 613
AjnI CCWGG 2 cut(s) 1135, 1335
AluBI AGCT 5 cut(s) 80, 264, 341, 618, 765
AluI AGCT 5 cut(s) 80, 264, 341, 618, 765
Alw21I GWGCWC 1 cut(s) 852
Alw26I GTCTC 4 cut(s) 442, 476, 799, 1104
AlwI GGATC 2 cut(s) 306, 593
Ama87I CYCGRG 1 cut(s) 353
AoxI GGCC 3 cut(s) 460, 481, 592
ApeKI GCWGC 5 cut(s) 104, 202, 910, 984, 987
ApoI RAATTY 3 cut(s) 827, 1140, 1237
ArsI GACNNNNNNTTYG 2 cut(s) 1274, 1306
AsiGI ACCGGT 2 cut(s) 274, 552
AspLEI GCGC 1 cut(s) 160
AspS9I GGNCC 4 cut(s) 277, 486, 812, 953
AsuC2I CCSGG 3 cut(s) 583, 606, 703
AsuHPI GGTGA 7 cut(s) 28, 53, 264, 277, 679, 808, 884
AvaI CYCGRG 1 cut(s) 353
AvaII GGWCC 4 cut(s) 277, 486, 812, 953
BaeI ACNNNNGTAYC 2 cut(s) 106, 139
BauI CACGAG 1 cut(s) 655
Bbv12I GWGCWC 1 cut(s) 852
BbvI GCAGC 5 cut(s) 91, 214, 897, 971, 999
BccI CCATC 4 cut(s) 39, 120, 186, 650
BceAI ACGGC 4 cut(s) 33, 186, 607, 997
BciT130I CCWGG 2 cut(s) 1137, 1337
BciVI GTATCC 3 cut(s) 190, 649, 955
BcnI CCSGG 3 cut(s) 583, 606, 703
BcoDI GTCTC 4 cut(s) 442, 476, 799, 1104
BfmI CTRYAG 1 cut(s) 985
BfuAI ACCTGC 1 cut(s) 1183
BfuI GTATCC 3 cut(s) 190, 649, 955
BisI GCNGC 9 cut(s) 42, 53, 67, 105, 203, 481, 911, 985, 988
BlsI GCNGC 9 cut(s) 43, 54, 68, 106, 204, 482, 912, 986, 989
Bme1390I CCNGG 5 cut(s) 583, 606, 703, 1137, 1337
Bme18I GGWCC 4 cut(s) 277, 486, 812, 953
BmeRI GACNNNNNGTC 1 cut(s) 437
BmeT110I CYCGRG 1 cut(s) 353
BmgBI CACGTC 2 cut(s) 434, 613
BmgT120I GGNCC 4 cut(s) 277, 486, 812, 953
BmiI GGNNCC 3 cut(s) 174, 424, 488
BmrFI CCNGG 5 cut(s) 583, 606, 703, 1137, 1337
BmrI ACTGGG 1 cut(s) 1272
BmsI GCATC 5 cut(s) 53, 105, 146, 868, 886
BmuI ACTGGG 1 cut(s) 1272
BpuMI CCSGG 3 cut(s) 583, 606, 703
Bsa29I ATCGAT 2 cut(s) 248, 301
BsaAI YACGTR 1 cut(s) 566
BsaBI GATNNNNATC 1 cut(s) 900
BsaHI GRCGYC 1 cut(s) 211
BsaI GGTCTC 1 cut(s) 442
BsaJI CCNNGG 4 cut(s) 294, 595, 604, 1336
BsaWI WCCGGW 2 cut(s) 274, 552
BsaXI ACNNNNNCTCC 4 cut(s) 248, 278, 1088, 1118
Bsc4I CCNNNNNNNGG 9 cut(s) 100, 116, 169, 274, 418, 458, 628, 793, 1181
Bse118I RCCGGY 5 cut(s) 274, 458, 483, 552, 995
Bse1I ACTGG 2 cut(s) 1267, 1365
Bse3DI GCAATG 1 cut(s) 781
Bse8I GATNNNNATC 1 cut(s) 900
BseBI CCWGG 2 cut(s) 1137, 1337
BseCI ATCGAT 2 cut(s) 248, 301
BseDI CCNNGG 4 cut(s) 294, 595, 604, 1336
BseGI GGATG 3 cut(s) 44, 829, 928
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 9 cut(s) 100, 116, 169, 274, 418, 458, 628, 793, 1181
BseMI GCAATG 1 cut(s) 781
BseMII CTCAG 1 cut(s) 1064
BseNI ACTGG 2 cut(s) 1267, 1365
BseX3I CGGCCG 1 cut(s) 481
BseXI GCAGC 5 cut(s) 91, 214, 897, 971, 999
Bsh1236I CGCG 3 cut(s) 69, 158, 480
Bsh1285I CGRYCG 3 cut(s) 478, 484, 553
BshFI GGCC 3 cut(s) 462, 483, 594
BshTI ACCGGT 2 cut(s) 274, 552
BshVI ATCGAT 2 cut(s) 248, 301
BsiEI CGRYCG 3 cut(s) 478, 484, 553
BsiHKAI GWGCWC 1 cut(s) 852
BsiHKCI CYCGRG 1 cut(s) 353
BsiWI CGTACG 1 cut(s) 562
BslFI GGGAC 2 cut(s) 218, 472
BslI CCNNNNNNNGG 9 cut(s) 100, 116, 169, 274, 418, 458, 628, 793, 1181
BsmAI GTCTC 4 cut(s) 442, 476, 799, 1104
BsmFI GGGAC 2 cut(s) 218, 472
BsnI GGCC 3 cut(s) 462, 483, 594
Bso31I GGTCTC 1 cut(s) 442
BsoBI CYCGRG 1 cut(s) 353
Bsp1286I GDGCHC 1 cut(s) 852
Bsp143I GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
BspANI GGCC 3 cut(s) 462, 483, 594
BspCNI CTCAG 1 cut(s) 1065
BspDI ATCGAT 2 cut(s) 248, 301
BspFNI CGCG 3 cut(s) 69, 158, 480
BspLI GGNNCC 3 cut(s) 174, 424, 488
BspMAI CTGCAG 1 cut(s) 989
BspMI ACCTGC 1 cut(s) 1183
BspPI GGATC 2 cut(s) 306, 593
BspQI GCTCTTC 1 cut(s) 840
BspTNI GGTCTC 1 cut(s) 442
BsrBI CCGCTC 2 cut(s) 55, 290
BsrDI GCAATG 1 cut(s) 781
BsrFI RCCGGY 5 cut(s) 274, 458, 483, 552, 995
BsrI ACTGG 2 cut(s) 1267, 1365
BssAI RCCGGY 5 cut(s) 274, 458, 483, 552, 995
BssECI CCNNGG 4 cut(s) 294, 595, 604, 1336
BssMI GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
BssNI GRCGYC 1 cut(s) 211
BssSI CACGAG 1 cut(s) 655
Bst2BI CACGAG 1 cut(s) 655
Bst2UI CCWGG 2 cut(s) 1137, 1337
Bst4CI ACNGT 1 cut(s) 731
Bst6I CTCTTC 3 cut(s) 331, 642, 840
BstACI GRCGYC 1 cut(s) 211
BstBAI YACGTR 1 cut(s) 566
BstC8I GCNNGC 6 cut(s) 131, 135, 262, 378, 460, 1003
BstDEI CTNAG 1 cut(s) 1073
BstDSI CCRYGG 1 cut(s) 294
BstF5I GGATG 3 cut(s) 44, 829, 928
BstFNI CGCG 3 cut(s) 69, 158, 480
BstHHI GCGC 1 cut(s) 160
BstKTI GATC 7 cut(s) 218, 252, 301, 305, 478, 588, 1113
BstMAI GTCTC 4 cut(s) 442, 476, 799, 1104
BstMBI GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
BstMCI CGRYCG 3 cut(s) 478, 484, 553
BstMWI GCNNNNNNNGC 5 cut(s) 386, 606, 615, 771, 1341
BstNI CCWGG 2 cut(s) 1137, 1337
BstSCI CCNGG 5 cut(s) 581, 604, 701, 1135, 1335
BstSFI CTRYAG 1 cut(s) 985
BstSNI TACGTA 1 cut(s) 566
BstUI CGCG 3 cut(s) 69, 158, 480
BstV1I GCAGC 5 cut(s) 91, 214, 897, 971, 999
BstXI CCANNNNNNTGG 1 cut(s) 1372
BstZI CGGCCG 1 cut(s) 481
Bsu15I ATCGAT 2 cut(s) 248, 301
BsuI GTATCC 3 cut(s) 190, 649, 955
BsuRI GGCC 3 cut(s) 462, 483, 594
BsuTUI ATCGAT 2 cut(s) 248, 301
BtgI CCRYGG 1 cut(s) 294
BtgZI GCGATG 1 cut(s) 484
BtrI CACGTC 2 cut(s) 434, 613
BtsCI GGATG 3 cut(s) 44, 829, 928
BtsIMutI CAGTG 1 cut(s) 1372
BveI ACCTGC 1 cut(s) 1183
Cac8I GCNNGC 6 cut(s) 131, 135, 262, 378, 460, 1003
CfoI GCGC 1 cut(s) 160
Cfr10I RCCGGY 5 cut(s) 274, 458, 483, 552, 995
Cfr13I GGNCC 4 cut(s) 277, 486, 812, 953
ClaI ATCGAT 2 cut(s) 248, 301
CpoI CGGWCCG 1 cut(s) 953
CseI GACGC 2 cut(s) 58, 266
Csp6I GTAC 3 cut(s) 563, 1156, 1246
CspAI ACCGGT 2 cut(s) 274, 552
CspI CGGWCCG 1 cut(s) 953
CviAII CATG 2 cut(s) 574, 1351
CviQI GTAC 3 cut(s) 563, 1156, 1246
DdeI CTNAG 1 cut(s) 1073
DpnI GATC 7 cut(s) 217, 251, 300, 304, 477, 587, 1112
DpnII GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
DrdI GACNNNNNNGTC 1 cut(s) 1019
DriI GACNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 1019
EaeI YGGCCR 2 cut(s) 460, 481
EagI CGGCCG 1 cut(s) 481
Eam1104I CTCTTC 3 cut(s) 331, 642, 840
Eam1105I GACNNNNNGTC 1 cut(s) 437
EarI CTCTTC 3 cut(s) 331, 642, 840
EciI GGCGGA 1 cut(s) 301
EclXI CGGCCG 1 cut(s) 481
Eco105I TACGTA 1 cut(s) 566
Eco31I GGTCTC 1 cut(s) 442
Eco47I GGWCC 4 cut(s) 277, 486, 812, 953
Eco52I CGGCCG 1 cut(s) 481
Eco88I CYCGRG 1 cut(s) 353
EcoRI GAATTC 1 cut(s) 827
EcoRII CCWGG 2 cut(s) 1135, 1335
FaeI CATG 2 cut(s) 577, 1354
FaiI YATR 9 cut(s) 245, 569, 575, 743, 906, 908, 1187, 1352, 1373
FalI AAGNNNNNCTT 2 cut(s) 1074, 1106
FaqI GGGAC 2 cut(s) 218, 472
FatI CATG 2 cut(s) 573, 1350
FauI CCCGC 1 cut(s) 707
FauNDI CATATG 1 cut(s) 906
FblI GTMKAC 1 cut(s) 726
Fnu4HI GCNGC 9 cut(s) 42, 53, 67, 105, 203, 481, 911, 985, 988
FokI GGATG 3 cut(s) 31, 836, 935
Fsp4HI GCNGC 9 cut(s) 42, 53, 67, 105, 203, 481, 911, 985, 988
GlaI GCGC 1 cut(s) 159
GluI GCNGC 9 cut(s) 42, 53, 67, 105, 203, 481, 911, 985, 988
HaeIII GGCC 3 cut(s) 462, 483, 594
HgaI GACGC 2 cut(s) 58, 266
HhaI GCGC 1 cut(s) 160
Hin1I GRCGYC 1 cut(s) 211
Hin1II CATG 2 cut(s) 577, 1354
Hin6I GCGC 1 cut(s) 158
HinP1I GCGC 1 cut(s) 158
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HinfI GANTC 4 cut(s) 4, 536, 653, 1097
HphI GGTGA 7 cut(s) 28, 53, 264, 277, 679, 808, 884
Hpy166II GTNNAC 1 cut(s) 727
Hpy188I TCNGA 8 cut(s) 196, 256, 447, 522, 694, 957, 975, 1074
Hpy188III TCNNGA 4 cut(s) 8, 473, 1114, 1166
Hpy8I GTNNAC 1 cut(s) 727
HpyAV CCTTC 3 cut(s) 973, 1120, 1249
HpyCH4III ACNGT 1 cut(s) 731
HpyCH4IV ACGT 9 cut(s) 121, 211, 433, 561, 565, 612, 1017, 1056, 1222
HpyCH4V TGCA 4 cut(s) 987, 1150, 1178, 1214
HpyF10VI GCNNNNNNNGC 5 cut(s) 386, 606, 615, 771, 1341
HpyF3I CTNAG 1 cut(s) 1073
HpySE526I ACGT 9 cut(s) 121, 211, 433, 561, 565, 612, 1017, 1056, 1222
Hsp92I GRCGYC 1 cut(s) 211
Hsp92II CATG 2 cut(s) 577, 1354
HspAI GCGC 1 cut(s) 158
KroI GCCGGC 1 cut(s) 458
KroNI GCCGGC 1 cut(s) 460
Kzo9I GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
LguI GCTCTTC 1 cut(s) 840
Lsp1109I GCAGC 5 cut(s) 91, 214, 897, 971, 999
LweI GCATC 5 cut(s) 53, 105, 146, 868, 886
MaeII ACGT 9 cut(s) 121, 211, 433, 561, 565, 612, 1017, 1056, 1222
MaeIII GTNAC 5 cut(s) 166, 239, 270, 283, 977
MalI GATC 7 cut(s) 217, 251, 300, 304, 477, 587, 1112
MbiI CCGCTC 2 cut(s) 55, 290
MboI GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
MboII GAAGA 7 cut(s) 318, 659, 770, 857, 887, 927, 1135
MfeI CAATTG 1 cut(s) 1285
MhlI GDGCHC 1 cut(s) 852
MluCI AATT 4 cut(s) 827, 1140, 1237, 1285
MlyI GAGTC 2 cut(s) 647, 1106
MmeI TCCRAC 3 cut(s) 279, 545, 1086
MroNI GCCGGC 1 cut(s) 458
MseI TTAA 1 cut(s) 1053
MslI CAYNNNNRTG 1 cut(s) 975
MspR9I CCNGG 5 cut(s) 583, 606, 703, 1137, 1337
MunI CAATTG 1 cut(s) 1285
MvaI CCWGG 2 cut(s) 1137, 1337
MvnI CGCG 3 cut(s) 69, 158, 480
MwoI GCNNNNNNNGC 5 cut(s) 386, 606, 615, 771, 1341
NaeI GCCGGC 1 cut(s) 460
NciI CCSGG 3 cut(s) 583, 606, 703
NdeI CATATG 1 cut(s) 906
NdeII GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
NgoMIV GCCGGC 1 cut(s) 458
NlaIII CATG 2 cut(s) 577, 1354
NlaIV GGNNCC 3 cut(s) 174, 424, 488
NmeAIII GCCGAG 2 cut(s) 576, 1016
NmuCI GTSAC 5 cut(s) 166, 239, 270, 283, 977
PaqCI CACCTGC 1 cut(s) 1183
PciSI GCTCTTC 1 cut(s) 840
PcsI WCGNNNNNNNCGW 3 cut(s) 162, 439, 518
PdiI GCCGGC 1 cut(s) 460
PfeI GAWTC 2 cut(s) 4, 536
Pfl23II CGTACG 1 cut(s) 562
PflFI GACNNNGTC 1 cut(s) 1019
PfoI TCCNGGA 2 cut(s) 581, 701
PinAI ACCGGT 2 cut(s) 274, 552
PkrI GCNGC 9 cut(s) 43, 54, 68, 106, 204, 482, 912, 986, 989
Ple19I CGATCG 1 cut(s) 478
PleI GAGTC 2 cut(s) 647, 1105
PpsI GAGTC 2 cut(s) 647, 1105
Ppu21I YACGTR 1 cut(s) 566
Psp6I CCWGG 2 cut(s) 1135, 1335
PspGI CCWGG 2 cut(s) 1135, 1335
PspLI CGTACG 1 cut(s) 562
PspN4I GGNNCC 3 cut(s) 174, 424, 488
PspPI GGNCC 4 cut(s) 277, 486, 812, 953
PstI CTGCAG 1 cut(s) 989
PsyI GACNNNGTC 1 cut(s) 1019
PvuI CGATCG 1 cut(s) 478
RsaI GTAC 3 cut(s) 564, 1157, 1247
RsaNI GTAC 3 cut(s) 563, 1156, 1246
RseI CAYNNNNRTG 1 cut(s) 975
Rsr2I CGGWCCG 1 cut(s) 953
RsrII CGGWCCG 1 cut(s) 953
SalI GTCGAC 1 cut(s) 725
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 1 cut(s) 1053
SatI GCNGC 9 cut(s) 42, 53, 67, 105, 203, 481, 911, 985, 988
Sau3AI GATC 7 cut(s) 215, 249, 298, 302, 475, 585, 1110
Sau96I GGNCC 4 cut(s) 277, 486, 812, 953
SchI GAGTC 2 cut(s) 647, 1106
ScrFI CCNGG 5 cut(s) 583, 606, 703, 1137, 1337
SduI GDGCHC 1 cut(s) 852
SfaNI GCATC 5 cut(s) 53, 105, 146, 868, 886
SfcI CTRYAG 1 cut(s) 985
SinI GGWCC 4 cut(s) 277, 486, 812, 953
SmiMI CAYNNNNRTG 1 cut(s) 975
SnaBI TACGTA 1 cut(s) 566
Sse9I AATT 4 cut(s) 827, 1140, 1237, 1285
SspI AATATT 1 cut(s) 1196
StyD4I CCNGG 5 cut(s) 581, 604, 701, 1135, 1335
TaaI ACNGT 1 cut(s) 731
TaiI ACGT 9 cut(s) 124, 214, 436, 564, 568, 615, 1020, 1059, 1225
TasI AATT 4 cut(s) 827, 1140, 1237, 1285
TatI WGTACW 1 cut(s) 1155
TauI GCSGC 4 cut(s) 44, 55, 69, 483
TfiI GAWTC 2 cut(s) 4, 536
Tru1I TTAA 1 cut(s) 1053
Tru9I TTAA 1 cut(s) 1053
TscAI CASTG 1 cut(s) 1372
TseFI GTSAC 5 cut(s) 166, 239, 270, 283, 977
TseI GCWGC 5 cut(s) 104, 202, 910, 984, 987
Tsp45I GTSAC 5 cut(s) 166, 239, 270, 283, 977
TspDTI ATGAA 9 cut(s) 840, 939, 955, 959, 1020, 1290, 1319, 1338, 1367
TspGWI ACGGA 7 cut(s) 132, 173, 177, 216, 311, 431, 532
TspRI CASTG 1 cut(s) 1372
Tth111I GACNNNGTC 1 cut(s) 1019
VpaK11BI GGWCC 4 cut(s) 277, 486, 812, 953
XapI RAATTY 3 cut(s) 827, 1140, 1237
XmiI GTMKAC 1 cut(s) 726
ZraI GACGTC 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.