RchiOBHm_Chr6g0258331

Carboxylesterase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0006911
Physical Location & Seq
Reverse (-)
13699997 .. 13700619
623 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23165

Sequence Viewer

Length: 204 bp
ATGGTTATGGTGCATCCGTTTTTTGGTGGGTCGGCCGTGGACGACGAAATGTGGCTGTACATGTGTCCGGAGAACGGCGGGGTGCAGGACAGGAGGCTGAGGCCGCCGGCAGAGGATCTGGCCGAGCTTGGATGCGAGAGGGTGTTGATATTTTTTTGCGGAGAAGGATCATCTGAGAGAGGTAGGGCAGTGGTACTGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

67

Amino Acids

7.5

Weight (kDa)

4.75

Isoelectric Point (pI)

56.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 67
AciI CCGC 3 cut(s) 78, 104, 159
AclWI GGATC 2 cut(s) 123, 175
AcoI YGGCCR 2 cut(s) 33, 120
AfaI GTAC 2 cut(s) 59, 195
AfiI CCNNNNNNNGG 2 cut(s) 23, 74
AflIII ACRYGT 1 cut(s) 60
AluBI AGCT 1 cut(s) 127
AluI AGCT 1 cut(s) 127
AlwI GGATC 2 cut(s) 123, 175
Aor13HI TCCGGA 1 cut(s) 67
AoxI GGCC 3 cut(s) 33, 101, 120
BbvCI CCTCAGC 1 cut(s) 98
BceAI ACGGC 2 cut(s) 20, 91
BisI GCNGC 1 cut(s) 104
BlsI GCNGC 1 cut(s) 105
BmsI GCATC 2 cut(s) 22, 122
Bpu10I CCTNAGC 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 36
BsaWI WCCGGW 1 cut(s) 67
Bsc4I CCNNNNNNNGG 2 cut(s) 23, 74
Bse118I RCCGGY 1 cut(s) 106
BseAI TCCGGA 1 cut(s) 67
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 2 cut(s) 13, 137
BseLI CCNNNNNNNGG 2 cut(s) 23, 74
BseMII CTCAG 2 cut(s) 89, 165
BseX3I CGGCCG 1 cut(s) 33
BsgI GTGCAG 1 cut(s) 104
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 3 cut(s) 35, 103, 122
BsiEI CGRYCG 1 cut(s) 36
BsiSI CCGG 2 cut(s) 68, 107
BslI CCNNNNNNNGG 2 cut(s) 23, 74
BsnI GGCC 3 cut(s) 35, 103, 122
Bsp13I TCCGGA 1 cut(s) 67
Bsp1407I TGTACA 1 cut(s) 57
Bsp143I GATC 2 cut(s) 115, 167
BspACI CCGC 3 cut(s) 78, 104, 159
BspANI GGCC 3 cut(s) 35, 103, 122
BspCNI CTCAG 2 cut(s) 90, 166
BspEI TCCGGA 1 cut(s) 67
BspPI GGATC 2 cut(s) 123, 175
BsrFI RCCGGY 1 cut(s) 106
BsrGI TGTACA 1 cut(s) 57
BssAI RCCGGY 1 cut(s) 106
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 2 cut(s) 115, 167
BstAUI TGTACA 1 cut(s) 57
BstC8I GCNNGC 1 cut(s) 108
BstDEI CTNAG 2 cut(s) 98, 174
BstDSI CCRYGG 1 cut(s) 36
BstF5I GGATG 2 cut(s) 13, 137
BstKTI GATC 2 cut(s) 118, 170
BstMBI GATC 2 cut(s) 115, 167
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 1 cut(s) 103
BstNSI RCATGY 1 cut(s) 64
BstX2I RGATCY 1 cut(s) 115
BstYI RGATCY 1 cut(s) 115
BstZI CGGCCG 1 cut(s) 33
BsuRI GGCC 3 cut(s) 35, 103, 122
BtgI CCRYGG 1 cut(s) 36
BtsCI GGATG 2 cut(s) 13, 137
BtsI GCAGTG 1 cut(s) 195
BtsIMutI CAGTG 1 cut(s) 195
Cac8I GCNNGC 1 cut(s) 108
Cfr10I RCCGGY 1 cut(s) 106
Csp6I GTAC 2 cut(s) 58, 194
CviAII CATG 1 cut(s) 61
CviJI RGCY 6 cut(s) 35, 55, 97, 103, 122, 127
CviKI_1 RGCY 6 cut(s) 35, 55, 97, 103, 122, 127
CviQI GTAC 2 cut(s) 58, 194
DdeI CTNAG 2 cut(s) 98, 174
DpnI GATC 2 cut(s) 117, 169
DpnII GATC 2 cut(s) 115, 167
EaeI YGGCCR 2 cut(s) 33, 120
EagI CGGCCG 1 cut(s) 33
EclXI CGGCCG 1 cut(s) 33
Eco52I CGGCCG 1 cut(s) 33
FaeI CATG 1 cut(s) 64
FaiI YATR 2 cut(s) 8, 62
FatI CATG 1 cut(s) 60
FauI CCCGC 1 cut(s) 71
Fnu4HI GCNGC 1 cut(s) 104
FokI GGATG 1 cut(s) 144
Fsp4HI GCNGC 1 cut(s) 104
GluI GCNGC 1 cut(s) 104
HaeIII GGCC 3 cut(s) 35, 103, 122
HapII CCGG 2 cut(s) 68, 107
Hin1II CATG 1 cut(s) 64
HpaII CCGG 2 cut(s) 68, 107
Hpy166II GTNNAC 1 cut(s) 40
Hpy188I TCNGA 1 cut(s) 175
Hpy188III TCNNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 40
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 1 cut(s) 158
HpyCH4V TGCA 2 cut(s) 13, 85
HpyF10VI GCNNNNNNNGC 1 cut(s) 103
HpyF3I CTNAG 2 cut(s) 98, 174
Hsp92II CATG 1 cut(s) 64
Kpn2I TCCGGA 1 cut(s) 67
KroI GCCGGC 1 cut(s) 106
KroNI GCCGGC 1 cut(s) 108
Kzo9I GATC 2 cut(s) 115, 167
LpnPI CCDG 5 cut(s) 71, 76, 81, 104, 120
LweI GCATC 2 cut(s) 22, 122
MalI GATC 2 cut(s) 117, 169
MboI GATC 2 cut(s) 115, 167
MflI RGATCY 1 cut(s) 115
MnlI CCTC 5 cut(s) 87, 93, 106, 132, 173
MroI TCCGGA 1 cut(s) 67
MroNI GCCGGC 1 cut(s) 106
MspI CCGG 2 cut(s) 68, 107
MwoI GCNNNNNNNGC 1 cut(s) 103
NaeI GCCGGC 1 cut(s) 108
NdeII GATC 2 cut(s) 115, 167
NgoMIV GCCGGC 1 cut(s) 106
NlaIII CATG 1 cut(s) 64
NmeAIII GCCGAG 1 cut(s) 148
NspI RCATGY 1 cut(s) 64
PciI ACATGT 1 cut(s) 60
PdiI GCCGGC 1 cut(s) 108
PkrI GCNGC 1 cut(s) 105
PscI ACATGT 1 cut(s) 60
PsuI RGATCY 1 cut(s) 115
RsaI GTAC 2 cut(s) 59, 195
RsaNI GTAC 2 cut(s) 58, 194
SatI GCNGC 1 cut(s) 104
Sau3AI GATC 2 cut(s) 115, 167
SetI ASST 2 cut(s) 129, 184
SfaNI GCATC 2 cut(s) 22, 122
SsiI CCGC 3 cut(s) 78, 104, 159
TatI WGTACW 1 cut(s) 57
TauI GCSGC 1 cut(s) 106
TscAI CASTG 1 cut(s) 195
TspGWI ACGGA 1 cut(s) 6
TspRI CASTG 1 cut(s) 195
XceI RCATGY 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.