Rh6CG085800

Carboxylesterase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0006911
Physical Location & Seq
Reverse (-)
9392506 .. 9392883
378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG085800.1

Sequence Viewer

Length: 378 bp
ATGGGGTTACCCGGAGTCAAAGTGGCGGGAATGGTTATGGTGCATCCCTTTTTTGGTGGGTCGGCCGTGGACGACGAAATGTGGCTGTACATGTGTCCGGAGAACGGCGGGGTGCAGGACAGGAGGCTGAGGCCGCCGGCAGAGGATCTGGCGAAGCTTGGATGCGAGAGGGTGTTGATATTTTTTGCGGAGAAGGATCATCTGAGAGAGGTAGGGCAGTGGTACTGTGATGAGCTGAAGAAGAGTGAGTGGGGTGGGAGTGTTGAAGTGGTGGAGCATGAGGATGTGTTTCATGTGTTTCATTTGCGCAGAGAACCTGAGGGAGAGAAAGCTCATGACTTGATCAAGAAGTTTGGTTCCTTCATCAAGCAAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

125

Amino Acids

14.32

Weight (kDa)

5.48

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 25 - 101 1e-08 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 308
AccIII TCCGGA 1 cut(s) 97
AciI CCGC 4 cut(s) 26, 108, 134, 188
AclWI GGATC 2 cut(s) 153, 204
AcoI YGGCCR 1 cut(s) 63
AcuI CTGAAG 1 cut(s) 257
AfaI GTAC 2 cut(s) 89, 224
AfiI CCNNNNNNNGG 2 cut(s) 53, 104
AflIII ACRYGT 1 cut(s) 90
AgsI TTSAA 1 cut(s) 266
AluBI AGCT 3 cut(s) 157, 235, 332
AluI AGCT 3 cut(s) 157, 235, 332
AlwI GGATC 2 cut(s) 153, 204
Aor13HI TCCGGA 1 cut(s) 97
AoxI GGCC 2 cut(s) 63, 131
AspLEI GCGC 1 cut(s) 309
AsuC2I CCSGG 1 cut(s) 12
AxyI CCTNAGG 1 cut(s) 318
BbvCI CCTCAGC 1 cut(s) 128
BceAI ACGGC 2 cut(s) 50, 121
BclI TGATCA 1 cut(s) 342
BcnI CCSGG 1 cut(s) 12
BisI GCNGC 1 cut(s) 134
BlsI GCNGC 1 cut(s) 135
Bme1390I CCNGG 1 cut(s) 12
BmiI GGNNCC 1 cut(s) 358
BmrFI CCNGG 1 cut(s) 12
BmsI GCATC 2 cut(s) 52, 152
Bpu10I CCTNAGC 1 cut(s) 128
BpuMI CCSGG 1 cut(s) 12
BsaJI CCNNGG 1 cut(s) 66
BsaWI WCCGGW 1 cut(s) 97
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 104
Bse118I RCCGGY 1 cut(s) 136
Bse21I CCTNAGG 1 cut(s) 318
BseAI TCCGGA 1 cut(s) 97
BseDI CCNNGG 1 cut(s) 66
BseGI GGATG 3 cut(s) 43, 167, 289
BseLI CCNNNNNNNGG 2 cut(s) 53, 104
BseMII CTCAG 3 cut(s) 119, 194, 309
BseX3I CGGCCG 1 cut(s) 63
BsgI GTGCAG 1 cut(s) 134
Bsh1285I CGRYCG 1 cut(s) 66
BshFI GGCC 2 cut(s) 65, 133
BsiEI CGRYCG 1 cut(s) 66
BsiSI CCGG 3 cut(s) 12, 98, 137
BslI CCNNNNNNNGG 2 cut(s) 53, 104
BsnI GGCC 2 cut(s) 65, 133
Bsp13I TCCGGA 1 cut(s) 97
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 3 cut(s) 145, 196, 342
BspACI CCGC 4 cut(s) 26, 108, 134, 188
BspANI GGCC 2 cut(s) 65, 133
BspCNI CTCAG 3 cut(s) 120, 195, 310
BspEI TCCGGA 1 cut(s) 97
BspHI TCATGA 1 cut(s) 334
BspLI GGNNCC 1 cut(s) 358
BspPI GGATC 2 cut(s) 153, 204
BsrFI RCCGGY 1 cut(s) 136
BsrGI TGTACA 1 cut(s) 87
BssAI RCCGGY 1 cut(s) 136
BssECI CCNNGG 1 cut(s) 66
BssMI GATC 3 cut(s) 145, 196, 342
Bst4CI ACNGT 1 cut(s) 227
Bst6I CTCTTC 1 cut(s) 236
BstAUI TGTACA 1 cut(s) 87
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 3 cut(s) 128, 203, 318
BstDSI CCRYGG 1 cut(s) 66
BstEII GGTNACC 1 cut(s) 6
BstF5I GGATG 3 cut(s) 43, 167, 289
BstHHI GCGC 1 cut(s) 309
BstKTI GATC 3 cut(s) 148, 199, 345
BstMBI GATC 3 cut(s) 145, 196, 342
BstMCI CGRYCG 1 cut(s) 66
BstMWI GCNNNNNNNGC 1 cut(s) 133
BstNSI RCATGY 1 cut(s) 94
BstPI GGTNACC 1 cut(s) 6
BstSCI CCNGG 1 cut(s) 10
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BstZI CGGCCG 1 cut(s) 63
Bsu36I CCTNAGG 1 cut(s) 318
BsuRI GGCC 2 cut(s) 65, 133
BtgI CCRYGG 1 cut(s) 66
BtsCI GGATG 3 cut(s) 43, 167, 289
BtsI GCAGTG 1 cut(s) 224
BtsIMutI CAGTG 1 cut(s) 224
Cac8I GCNNGC 1 cut(s) 138
CciI TCATGA 1 cut(s) 334
CfoI GCGC 1 cut(s) 309
Cfr10I RCCGGY 1 cut(s) 136
Csp6I GTAC 2 cut(s) 88, 223
CviAII CATG 4 cut(s) 91, 278, 293, 335
CviJI RGCY 7 cut(s) 65, 85, 127, 133, 157, 235, 332
CviKI_1 RGCY 7 cut(s) 65, 85, 127, 133, 157, 235, 332
CviQI GTAC 2 cut(s) 88, 223
DdeI CTNAG 3 cut(s) 128, 203, 318
DpnI GATC 3 cut(s) 147, 198, 344
DpnII GATC 3 cut(s) 145, 196, 342
EaeI YGGCCR 1 cut(s) 63
EagI CGGCCG 1 cut(s) 63
Eam1104I CTCTTC 1 cut(s) 236
EarI CTCTTC 1 cut(s) 236
EclXI CGGCCG 1 cut(s) 63
Eco52I CGGCCG 1 cut(s) 63
Eco57I CTGAAG 1 cut(s) 257
Eco81I CCTNAGG 1 cut(s) 318
Eco91I GGTNACC 1 cut(s) 6
EcoO65I GGTNACC 1 cut(s) 6
FaeI CATG 4 cut(s) 94, 281, 296, 338
FaiI YATR 5 cut(s) 38, 92, 279, 294, 336
FatI CATG 4 cut(s) 90, 277, 292, 334
FauI CCCGC 2 cut(s) 19, 101
FbaI TGATCA 1 cut(s) 342
Fnu4HI GCNGC 1 cut(s) 134
FokI GGATG 3 cut(s) 30, 174, 296
Fsp4HI GCNGC 1 cut(s) 134
FspI TGCGCA 1 cut(s) 308
GlaI GCGC 1 cut(s) 308
GluI GCNGC 1 cut(s) 134
HaeIII GGCC 2 cut(s) 65, 133
HapII CCGG 3 cut(s) 12, 98, 137
HhaI GCGC 1 cut(s) 309
Hin1II CATG 4 cut(s) 94, 281, 296, 338
Hin6I GCGC 1 cut(s) 307
HinP1I GCGC 1 cut(s) 307
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 1 cut(s) 15
HpaII CCGG 3 cut(s) 12, 98, 137
Hpy166II GTNNAC 1 cut(s) 70
Hpy188I TCNGA 1 cut(s) 204
Hpy188III TCNNGA 3 cut(s) 98, 335, 346
Hpy8I GTNNAC 1 cut(s) 70
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 2 cut(s) 187, 370
HpyCH4III ACNGT 1 cut(s) 227
HpyCH4V TGCA 2 cut(s) 43, 115
HpyF10VI GCNNNNNNNGC 1 cut(s) 133
HpyF3I CTNAG 3 cut(s) 128, 203, 318
Hsp92II CATG 4 cut(s) 94, 281, 296, 338
HspAI GCGC 1 cut(s) 307
Kpn2I TCCGGA 1 cut(s) 97
KroI GCCGGC 1 cut(s) 136
KroNI GCCGGC 1 cut(s) 138
Ksp22I TGATCA 1 cut(s) 342
Kzo9I GATC 3 cut(s) 145, 196, 342
LmnI GCTCC 1 cut(s) 274
LpnPI CCDG 7 cut(s) 25, 101, 106, 111, 134, 150, 330
LweI GCATC 2 cut(s) 52, 152
MaeIII GTNAC 1 cut(s) 6
MalI GATC 3 cut(s) 147, 198, 344
MboI GATC 3 cut(s) 145, 196, 342
MboII GAAGA 2 cut(s) 250, 253
MflI RGATCY 1 cut(s) 145
MlyI GAGTC 1 cut(s) 24
MnlI CCTC 7 cut(s) 117, 123, 136, 162, 202, 274, 313
MroI TCCGGA 1 cut(s) 97
MroNI GCCGGC 1 cut(s) 136
MslI CAYNNNNRTG 1 cut(s) 282
MspI CCGG 3 cut(s) 12, 98, 137
MspR9I CCNGG 1 cut(s) 12
MwoI GCNNNNNNNGC 1 cut(s) 133
NaeI GCCGGC 1 cut(s) 138
NciI CCSGG 1 cut(s) 12
NdeII GATC 3 cut(s) 145, 196, 342
NgoMIV GCCGGC 1 cut(s) 136
NlaIII CATG 4 cut(s) 94, 281, 296, 338
NlaIV GGNNCC 1 cut(s) 358
NsbI TGCGCA 1 cut(s) 308
NspI RCATGY 1 cut(s) 94
PagI TCATGA 1 cut(s) 334
PciI ACATGT 1 cut(s) 90
PdiI GCCGGC 1 cut(s) 138
PkrI GCNGC 1 cut(s) 135
PleI GAGTC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 23
PscI ACATGT 1 cut(s) 90
PspEI GGTNACC 1 cut(s) 6
PspN4I GGNNCC 1 cut(s) 358
PsuI RGATCY 1 cut(s) 145
RsaI GTAC 2 cut(s) 89, 224
RsaNI GTAC 2 cut(s) 88, 223
RseI CAYNNNNRTG 1 cut(s) 282
SatI GCNGC 1 cut(s) 134
Sau3AI GATC 3 cut(s) 145, 196, 342
SchI GAGTC 1 cut(s) 24
ScrFI CCNGG 1 cut(s) 12
SetI ASST 5 cut(s) 159, 213, 237, 319, 334
SfaNI GCATC 2 cut(s) 52, 152
SmiMI CAYNNNNRTG 1 cut(s) 282
SsiI CCGC 4 cut(s) 26, 108, 134, 188
StyD4I CCNGG 1 cut(s) 10
TaaI ACNGT 1 cut(s) 227
TatI WGTACW 1 cut(s) 87
TauI GCSGC 1 cut(s) 136
TscAI CASTG 1 cut(s) 224
TspDTI ATGAA 3 cut(s) 281, 290, 352
TspRI CASTG 1 cut(s) 224
XceI RCATGY 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.