Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Reverse (-)

66158579 .. 66161757

Gene Structure 3179 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27692

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGTCTTGGGGTCTCTTGGTTTTTCTGTTGCTGGTGAATTCAGCCCTGCCCAATGGAAGAGGGGACAGATGTCAAAAAACCCAACAACACAGAGTTGCAAGAATAGGAGCTGTATTTGATTTCACTTCTCGTGTGGGCAAAGAACAGAGAATAGCCATCGATTTGGCTATCCAAGACCTTCTTCACTCAAGCTGCCTTACAGTAAACTTAGACCTCAGAGATTCACAAGGCAATTCAGCTAAATCAACTGCTGCTGTAATCAATCTTCTTAATGTCAAACAAGTTGAAGCCATCATCGGAACACTGACAAAGCAAGAAGCTGCTCTGGTCTCCGAGCTTGACAATCGCAGCCAGAATTTCACCATCATATCGCTTCCTTCCACTGCCATAAATCCACCATCAGCCTCACTTCAACTGCCAAATTTTCTCCAAGCAGCAAATGACATTGTTATCCATATGCAATGCTTGGCAGCCTTAGTTGGTCATTTCCAATGGAGAAAGGTGACTGCAATTTATGAACAAAACATTGACTTTTCCTCCAATTCTGGAATGATAACCCTCCTCTCTGATTCACTTAAATTAGTCAACTCAGAGATTGAACACCACCAAGCTTTCCCAACCCTCTCTTCTCTGTGTGATCCGGATGCCTTTTTTGATGAAGAGCTGAAGAAGTTGAGGTGCAAGAGCAACAGGGTTTTCATAGTTACCCAGTTCTCTTTAAATACAGCTGTTTTTCTCTTTGAAAAGGCAAAGGAAATGGGGATGATGGGCAAAGGCTATGTGTGGATTGTCACAGATGAAATTGCAAGCCTTCTTGACTCTGTTGACTCTTCTATCAAGTACGACATGCAAGGTGTGATTGGTATCAAAACCAACTTCATAGAAACAACCCACACTTTCACCAAGTTCAAAACCAGGTTTCGCAGACTGTATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGTCCAAGCATCTTTGCTCTTCGAACATATGACGCAATGCACGCCATTGCTCTAGCCATGAAAAATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCGAATTCCAAGGTCTAAGTGGCATGATGGAGTTCAAGAATGGCATGCTATCACAACAACCAACCTTTCAAATCATTAATGTGTTTGGCAGAAGCTACAGCGAGATTGCATTCTGGTCACCAAGCTTCGGTTTCTCAGACGACATGAACAAACACCTCGATATGAAGGAGAGGACTAATCACAATTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGCTTACAAGCAGCTCCAAAGGGGTGGAGTACTCTTGTCGATGGAGAGAGACCGTTGAAGATAGGGATTCCGGCGAGGGGTGCCTTCAATCAATTTGTGAAAGTAACGTATGACCAGGACAAGAATCAGACACACATCTCAGGGTTTTCAATTGATATGTTCGAAGCAGCTGTGAAAAACCTGCCTTATCAGTTGCCTTATGTGTTTGTTCCCTTCAATGGCTCATATGATGAATTGGTGGAACAGGTCTACTACAAGGGCTTGGATGCAGCTGTTGGTGATATAGAAGTCATAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATATATAAGCTCTGGACTTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTGAAGGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCATGATCACTACACACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGTGAACATGGGCAAAACTTTGAATTAGAGGGTATTGGGGCCATCCTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCAAGGCTGGTGCTGGCTCCATGGTTAGTAGTGATTCTAGTAGTAACAGCCACTTTCACAGCAAGCCTCACTTCCATGATGACCATCTCTCGTGTCCAGCCATCTGTGCTCAATGTGGAAACACTTAAGAGAGAAAATGGGACTGTTGGATGTAATGGAAACTCTTTTATAGTAAAGTACTTGATCGATGTTCTAGAGTTCAGACCAGAAAACATCAAGAGAATTTCCTCCATAAGTGACTACCCAAAGGCCTTCCAGAATGGAGATATTCAAGTGGCTTTCTTCGTCGCCCCCCATGCTAAAGTCTTTCTCGCATGTTACTGCAAGGGCTATATGAAAGCAGGTCCTATATACAAGCCTAGCGGCTTTGCATTTGTTTTTCCAAAGGGATCTCCCCTGGCCATTGACCTGTCAAAGGCAATCCTAGATGTAAACGAGAAGAAGCAAGTGGAGCTATTAGAAAAACAAATGCTCTCCTCCTTTAACTGCTCCCCTTCACTCAACTTGAACGATGGTCCAATAGGTTATGAGCCCTTTTCCGGCCTATTTCTAATTTCAGGTTTGGTTTGTGCATTTGCTCTATTGGTTACGAGTGGGCGTATCGCCGGTAGACATCTGCAGAATATGAGCTGCATACGAGCAATACTAATGAAAACAGGAATTCTAAGATGGGCTTTTATGTACTTGATTCAGAGCCGCAGAAAATCTCAAAAGCATTGCTCCACAACCTCCATCCTGGAAACTTGCTCTACAAGGAACATGAGCAGTGGTGGTGATATAGTGATTATCACGCACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

891

Amino Acids

99.89

Weight (kDa)

8.04

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	34 - 363	3.7e-07	Periplasmic binding protein
ANF_receptor	PF01094	51 - 384	1.3e-40	Receptor family ligand binding region
SBP_bac_3	PF00497	465 - 779	1e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	569 - 813	2.4e-19	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1479, 2207
AccB1I	GGYRCC	1 cut(s)	1370
AccB7I	CCANNNNNTGG	1 cut(s)	1818
AccI	GTMKAC	2 cut(s)	1539, 2485
AccIII	TCCGGA	1 cut(s)	640
AciI	CCGC	2 cut(s)	2238, 2572
AclWI	GGATC	2 cut(s)	632, 2272
AcoI	YGGCCR	2 cut(s)	1283, 2274
AcsI	RAATTY	6 cut(s)	37, 355, 421, 1073, 2097, 2535
AcuI	CTGAAG	5 cut(s)	686, 969, 1622, 1684, 1691
AfaI	GTAC	4 cut(s)	842, 1321, 2054, 2558
AfiI	CCNNNNNNNGG	6 cut(s)	1196, 1367, 1508, 1818, 2290, 2414
AflII	CTTAAG	1 cut(s)	2000
AgeI	ACCGGT	1 cut(s)	1590
AjnI	CCWGG	5 cut(s)	914, 1285, 1404, 2271, 2610
AjuI	GAANNNNNNNTTGG	4 cut(s)	165, 197, 610, 642
Alw21I	GWGCWC	1 cut(s)	1986
Alw26I	GTCTC	4 cut(s)	17, 334, 1056, 1333
AlwI	GGATC	2 cut(s)	632, 2272
Aor13HI	TCCGGA	1 cut(s)	640
AoxI	GGCC	5 cut(s)	1283, 1809, 2124, 2274, 2416
ApoI	RAATTY	6 cut(s)	37, 355, 421, 1073, 2097, 2535
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
AseI	ATTAAT	1 cut(s)	1146
AsiGI	ACCGGT	1 cut(s)	1590
Asp700I	GAANNNNTTC	2 cut(s)	1697, 1860
AspS9I	GGNCC	4 cut(s)	1271, 1809, 2219, 2390
AsuHPI	GGTGA	8 cut(s)	46, 352, 514, 892, 1179, 1580, 1822, 2660
AsuII	TTCGAA	2 cut(s)	988, 1452
AvaII	GGWCC	3 cut(s)	1271, 2219, 2390
BalI	TGGCCA	2 cut(s)	1285, 2276
BanI	GGYRCC	1 cut(s)	1370
BanII	GRGCYC	1 cut(s)	2409
BarI	GAAGNNNNNNTAC	2 cut(s)	249, 281
BauI	CACGAG	2 cut(s)	129, 1965
Bbv12I	GWGCWC	1 cut(s)	1986
BciT130I	CCWGG	5 cut(s)	916, 1287, 1406, 2273, 2612
BclI	TGATCA	1 cut(s)	1725
BcoDI	GTCTC	4 cut(s)	17, 334, 1056, 1333
BfaI	CTAG	6 cut(s)	966, 1019, 1913, 2069, 2235, 2300
BfmI	CTRYAG	2 cut(s)	1165, 2492
BfrI	CTTAAG	1 cut(s)	2000
BfuAI	ACCTGC	2 cut(s)	1479, 2207
BmcAI	AGTACT	2 cut(s)	1321, 2054
Bme1390I	CCNGG	5 cut(s)	916, 1287, 1406, 2273, 2612
Bme18I	GGWCC	3 cut(s)	1271, 2219, 2390
BmgT120I	GGNCC	4 cut(s)	1271, 1809, 2219, 2390
BmiI	GGNNCC	4 cut(s)	1272, 1372, 1810, 1893
BmrFI	CCNGG	5 cut(s)	916, 1287, 1406, 2273, 2612
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	3 cut(s)	634, 984, 1546
BmuI	ACTGGG	1 cut(s)	703
BoxI	GACNNNNGTC	1 cut(s)	69
Bpu14I	TTCGAA	2 cut(s)	988, 1452
BpuEI	CTTGAG	2 cut(s)	172, 1038
Bsa29I	ATCGAT	2 cut(s)	159, 2061
BsaBI	GATNNNNATC	2 cut(s)	863, 1958
BsaI	GGTCTC	3 cut(s)	17, 334, 1333
BsaJI	CCNNGG	3 cut(s)	1078, 1895, 2271
BsaWI	WCCGGW	2 cut(s)	640, 1590
BsaXI	ACNNNNNCTCC	2 cut(s)	521, 551
Bsc4I	CCNNNNNNNGG	6 cut(s)	1196, 1367, 1508, 1818, 2290, 2414
Bse118I	RCCGGY	2 cut(s)	1590, 2480
Bse1I	ACTGG	3 cut(s)	709, 1286, 2671
Bse3DI	GCAATG	4 cut(s)	467, 1008, 1011, 2590
Bse8I	GATNNNNATC	2 cut(s)	863, 1958
BseAI	TCCGGA	1 cut(s)	640
BseBI	CCWGG	5 cut(s)	916, 1287, 1406, 2273, 2612
BseCI	ATCGAT	2 cut(s)	159, 2061
BseDI	CCNNGG	3 cut(s)	1078, 1895, 2271
BseGI	GGATG	7 cut(s)	649, 768, 1561, 1689, 1812, 2030, 2607
BseJI	GATNNNNATC	2 cut(s)	863, 1958
BseLI	CCNNNNNNNGG	6 cut(s)	1196, 1367, 1508, 1818, 2290, 2414
BseMI	GCAATG	4 cut(s)	467, 1008, 1011, 2590
BseMII	CTCAG	4 cut(s)	229, 603, 1218, 1443
BseNI	ACTGG	3 cut(s)	709, 1286, 2671
BseRI	GAGGAG	2 cut(s)	551, 2341
BshFI	GGCC	5 cut(s)	1285, 1811, 2126, 2276, 2418
BshNI	GGYRCC	1 cut(s)	1370
BshTI	ACCGGT	1 cut(s)	1590
BshVI	ATCGAT	2 cut(s)	159, 2061
BsiHKAI	GWGCWC	1 cut(s)	1986
BsiSI	CCGG	5 cut(s)	641, 1361, 1591, 2415, 2481
BslFI	GGGAC	2 cut(s)	77, 2029
BslI	CCNNNNNNNGG	6 cut(s)	1196, 1367, 1508, 1818, 2290, 2414
BsmAI	GTCTC	4 cut(s)	17, 334, 1056, 1333
BsmFI	GGGAC	2 cut(s)	77, 2029
BsmI	GAATGC	2 cut(s)	1178, 1699
BsnI	GGCC	5 cut(s)	1285, 1811, 2126, 2276, 2418
Bso31I	GGTCTC	3 cut(s)	17, 334, 1333
Bsp119I	TTCGAA	2 cut(s)	988, 1452
Bsp1286I	GDGCHC	2 cut(s)	1986, 2409
Bsp13I	TCCGGA	1 cut(s)	640
Bsp143I	GATC	4 cut(s)	637, 1725, 2058, 2264
Bsp19I	CCATGG	1 cut(s)	1895
BspACI	CCGC	2 cut(s)	2238, 2572
BspANI	GGCC	5 cut(s)	1285, 1811, 2126, 2276, 2418
BspCNI	CTCAG	4 cut(s)	228, 602, 1217, 1442
BspDI	ATCGAT	2 cut(s)	159, 2061
BspEI	TCCGGA	1 cut(s)	640
BspHI	TCATGA	2 cut(s)	1689, 1722
BspLI	GGNNCC	4 cut(s)	1272, 1372, 1810, 1893
BspMAI	CTGCAG	1 cut(s)	2496
BspMI	ACCTGC	2 cut(s)	1479, 2207
BspPI	GGATC	2 cut(s)	632, 2272
BspQI	GCTCTTC	2 cut(s)	654, 990
BspT104I	TTCGAA	2 cut(s)	988, 1452
BspT107I	GGYRCC	1 cut(s)	1370
BspTI	CTTAAG	1 cut(s)	2000
BspTNI	GGTCTC	3 cut(s)	17, 334, 1333
BsrDI	GCAATG	4 cut(s)	467, 1008, 1011, 2590
BsrFI	RCCGGY	2 cut(s)	1590, 2480
BsrI	ACTGG	3 cut(s)	709, 1286, 2671
BssAI	RCCGGY	2 cut(s)	1590, 2480
BssECI	CCNNGG	3 cut(s)	1078, 1895, 2271
BssMI	GATC	4 cut(s)	637, 1725, 2058, 2264
BssSI	CACGAG	2 cut(s)	129, 1965
BssT1I	CCWWGG	2 cut(s)	1078, 1895
Bst2BI	CACGAG	2 cut(s)	129, 1965
Bst2UI	CCWGG	5 cut(s)	916, 1287, 1406, 2273, 2612
Bst4CI	ACNGT	6 cut(s)	202, 930, 1344, 1654, 1834, 2020
Bst6I	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
BstAFI	CTTAAG	1 cut(s)	2000
BstBI	TTCGAA	2 cut(s)	988, 1452
BstC8I	GCNNGC	5 cut(s)	808, 1008, 1115, 1890, 1939
BstDEI	CTNAG	8 cut(s)	208, 215, 475, 589, 1085, 1204, 1429, 2540
BstDSI	CCRYGG	1 cut(s)	1895
BstEII	GGTNACC	1 cut(s)	1185
BstENI	CCTNNNNNAGG	1 cut(s)	2288
BstF5I	GGATG	7 cut(s)	649, 768, 1561, 1689, 1812, 2030, 2607
BstKTI	GATC	4 cut(s)	640, 1728, 2061, 2267
BstMAI	GTCTC	4 cut(s)	17, 334, 1056, 1333
BstMBI	GATC	4 cut(s)	637, 1725, 2058, 2264
BstMWI	GCNNNNNNNGC	6 cut(s)	1007, 1370, 1666, 1981, 2171, 2326
BstNI	CCWGG	5 cut(s)	916, 1287, 1406, 2273, 2612
BstNSI	RCATGY	4 cut(s)	850, 1117, 1714, 2193
BstPAI	GACNNNNGTC	1 cut(s)	69
BstPI	GGTNACC	1 cut(s)	1185
BstSCI	CCNGG	5 cut(s)	914, 1285, 1404, 2271, 2610
BstSFI	CTRYAG	2 cut(s)	1165, 2492
BstX2I	RGATCY	1 cut(s)	2264
BstXI	CCANNNNNNTGG	3 cut(s)	163, 1281, 1314
BstYI	RGATCY	1 cut(s)	2264
Bsu15I	ATCGAT	2 cut(s)	159, 2061
BsuRI	GGCC	5 cut(s)	1285, 1811, 2126, 2276, 2418
BsuTUI	ATCGAT	2 cut(s)	159, 2061
BtgI	CCRYGG	1 cut(s)	1895
BtsCI	GGATG	7 cut(s)	649, 768, 1561, 1689, 1812, 2030, 2607
BtsI	GCAGTG	2 cut(s)	381, 2647
BtsIMutI	CAGTG	4 cut(s)	302, 381, 1650, 2647
BveI	ACCTGC	2 cut(s)	1479, 2207
Cac8I	GCNNGC	5 cut(s)	808, 1008, 1115, 1890, 1939
CciI	TCATGA	2 cut(s)	1689, 1722
Cfr10I	RCCGGY	2 cut(s)	1590, 2480
Cfr13I	GGNCC	4 cut(s)	1271, 1809, 2219, 2390
ClaI	ATCGAT	2 cut(s)	159, 2061
CseI	GACGC	1 cut(s)	1007
CsiI	ACCWGGT	1 cut(s)	914
Csp6I	GTAC	4 cut(s)	841, 1320, 2053, 2557
CspAI	ACCGGT	1 cut(s)	1590
CviQI	GTAC	4 cut(s)	841, 1320, 2053, 2557
DdeI	CTNAG	8 cut(s)	208, 215, 475, 589, 1085, 1204, 1429, 2540
DpnI	GATC	4 cut(s)	639, 1727, 2060, 2266
DpnII	GATC	4 cut(s)	637, 1725, 2058, 2264
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	2 cut(s)	1283, 2274
Eam1104I	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
EarI	CTCTTC	5 cut(s)	52, 631, 654, 835, 990
Eco130I	CCWWGG	2 cut(s)	1078, 1895
Eco147I	AGGCCT	1 cut(s)	2126
Eco24I	GRGCYC	1 cut(s)	2409
Eco31I	GGTCTC	3 cut(s)	17, 334, 1333
Eco47I	GGWCC	3 cut(s)	1271, 2219, 2390
Eco57I	CTGAAG	5 cut(s)	686, 969, 1622, 1684, 1691
Eco91I	GGTNACC	1 cut(s)	1185
EcoNI	CCTNNNNNAGG	1 cut(s)	2288
EcoO109I	RGGNCCY	1 cut(s)	2219
EcoO65I	GGTNACC	1 cut(s)	1185
EcoRI	GAATTC	3 cut(s)	37, 1073, 2535
EcoRII	CCWGG	5 cut(s)	914, 1285, 1404, 2271, 2610
EcoT14I	CCWWGG	2 cut(s)	1078, 1895
EcoT38I	GRGCYC	1 cut(s)	2409
ErhI	CCWWGG	2 cut(s)	1078, 1895
FalI	AAGNNNNNCTT	6 cut(s)	165, 197, 1930, 1962, 2533, 2565
FaqI	GGGAC	2 cut(s)	77, 2029
FauNDI	CATATG	3 cut(s)	456, 994, 1516
FbaI	TGATCA	1 cut(s)	1725
FblI	GTMKAC	2 cut(s)	1539, 2485
FokI	GGATG	7 cut(s)	656, 775, 1568, 1696, 1799, 2037, 2594
FriOI	GRGCYC	1 cut(s)	2409
FspBI	CTAG	6 cut(s)	966, 1019, 1913, 2069, 2235, 2300
HaeIII	GGCC	5 cut(s)	1285, 1811, 2126, 2276, 2418
HapII	CCGG	5 cut(s)	641, 1361, 1591, 2415, 2481
HgaI	GACGC	1 cut(s)	1007
HincII	GTYRAC	2 cut(s)	586, 826
HindII	GTYRAC	2 cut(s)	586, 826
HindIII	AAGCTT	2 cut(s)	609, 1192
HinfI	GANTC	8 cut(s)	221, 569, 818, 827, 1357, 1414, 1909, 2563
HpaII	CCGG	5 cut(s)	641, 1361, 1591, 2415, 2481
HphI	GGTGA	8 cut(s)	46, 352, 514, 892, 1179, 1580, 1822, 2660
Hpy166II	GTNNAC	8 cut(s)	205, 586, 826, 1068, 1540, 1775, 2308, 2486
Hpy8I	GTNNAC	8 cut(s)	205, 586, 826, 1068, 1540, 1775, 2308, 2486
Hpy99I	CGWCG	1 cut(s)	2165
HpyCH4III	ACNGT	6 cut(s)	202, 930, 1344, 1654, 1834, 2020
HpyCH4IV	ACGT	1 cut(s)	1397
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1007, 1370, 1666, 1981, 2171, 2326
HpyF3I	CTNAG	8 cut(s)	208, 215, 475, 589, 1085, 1204, 1429, 2540
HpySE526I	ACGT	1 cut(s)	1397
Kpn2I	TCCGGA	1 cut(s)	640
Ksp22I	TGATCA	1 cut(s)	1725
Kzo9I	GATC	4 cut(s)	637, 1725, 2058, 2264
LguI	GCTCTTC	2 cut(s)	654, 990
LmnI	GCTCC	6 cut(s)	107, 1309, 1897, 2326, 2369, 2600
LweI	GCATC	3 cut(s)	634, 984, 1546
MabI	ACCWGGT	1 cut(s)	914
MaeI	CTAG	6 cut(s)	966, 1019, 1913, 2069, 2235, 2300
MaeII	ACGT	1 cut(s)	1397
MalI	GATC	4 cut(s)	639, 1727, 2060, 2266
MboI	GATC	4 cut(s)	637, 1725, 2058, 2264
MfeI	CAATTG	1 cut(s)	1440
MflI	RGATCY	1 cut(s)	2264
MhlI	GDGCHC	2 cut(s)	1986, 2409
MlsI	TGGCCA	2 cut(s)	1285, 2276
MluNI	TGGCCA	2 cut(s)	1285, 2276
MlyI	GAGTC	2 cut(s)	812, 821
MmeI	TCCRAC	1 cut(s)	2002
Mox20I	TGGCCA	2 cut(s)	1285, 2276
MroI	TCCGGA	1 cut(s)	640
MroXI	GAANNNNTTC	2 cut(s)	1697, 1860
MscI	TGGCCA	2 cut(s)	1285, 2276
MseI	TTAA	6 cut(s)	270, 576, 719, 1146, 2001, 2358
MslI	CAYNNNNRTG	3 cut(s)	1148, 1254, 1949
Msp20I	TGGCCA	2 cut(s)	1285, 2276
MspA1I	CMGCKG	3 cut(s)	728, 1460, 1562
MspCI	CTTAAG	1 cut(s)	2000
MspI	CCGG	5 cut(s)	641, 1361, 1591, 2415, 2481
MspR9I	CCNGG	5 cut(s)	916, 1287, 1406, 2273, 2612
MunI	CAATTG	1 cut(s)	1440
Mva1269I	GAATGC	2 cut(s)	1178, 1699
MvaI	CCWGG	5 cut(s)	916, 1287, 1406, 2273, 2612
MwoI	GCNNNNNNNGC	6 cut(s)	1007, 1370, 1666, 1981, 2171, 2326
NcoI	CCATGG	1 cut(s)	1895
NdeI	CATATG	3 cut(s)	456, 994, 1516
NdeII	GATC	4 cut(s)	637, 1725, 2058, 2264
NlaIV	GGNNCC	4 cut(s)	1272, 1372, 1810, 1893
NmuCI	GTSAC	6 cut(s)	502, 790, 1185, 1648, 1828, 2111
NspI	RCATGY	4 cut(s)	850, 1117, 1714, 2193
NspV	TTCGAA	2 cut(s)	988, 1452
PaeI	GCATGC	1 cut(s)	1117
PagI	TCATGA	2 cut(s)	1689, 1722
PceI	AGGCCT	1 cut(s)	2126
PciSI	GCTCTTC	2 cut(s)	654, 990
PctI	GAATGC	2 cut(s)	1178, 1699
PdmI	GAANNNNTTC	2 cut(s)	1697, 1860
PfeI	GAWTC	6 cut(s)	221, 569, 1357, 1414, 1909, 2563
PflMI	CCANNNNNTGG	1 cut(s)	1818
PfoI	TCCNGGA	1 cut(s)	2610
PinAI	ACCGGT	1 cut(s)	1590
PleI	GAGTC	2 cut(s)	812, 821
PpsI	GAGTC	2 cut(s)	812, 821
PpuMI	RGGWCCY	1 cut(s)	2219
PshAI	GACNNNNGTC	1 cut(s)	69
PshBI	ATTAAT	1 cut(s)	1146
Psp5II	RGGWCCY	1 cut(s)	2219
Psp6I	CCWGG	5 cut(s)	914, 1285, 1404, 2271, 2610
PspEI	GGTNACC	1 cut(s)	1185
PspGI	CCWGG	5 cut(s)	914, 1285, 1404, 2271, 2610
PspN4I	GGNNCC	4 cut(s)	1272, 1372, 1810, 1893
PspPI	GGNCC	4 cut(s)	1271, 1809, 2219, 2390
PspPPI	RGGWCCY	1 cut(s)	2219
PstI	CTGCAG	1 cut(s)	2496
PsuI	RGATCY	1 cut(s)	2264
PvuII	CAGCTG	3 cut(s)	728, 1460, 1562
RsaI	GTAC	4 cut(s)	842, 1321, 2054, 2558
RsaNI	GTAC	4 cut(s)	841, 1320, 2053, 2557
RseI	CAYNNNNRTG	3 cut(s)	1148, 1254, 1949
SapI	GCTCTTC	2 cut(s)	654, 990
SaqAI	TTAA	6 cut(s)	270, 576, 719, 1146, 2001, 2358
Sau3AI	GATC	4 cut(s)	637, 1725, 2058, 2264
Sau96I	GGNCC	4 cut(s)	1271, 1809, 2219, 2390
ScaI	AGTACT	2 cut(s)	1321, 2054
SchI	GAGTC	2 cut(s)	812, 821
ScrFI	CCNGG	5 cut(s)	916, 1287, 1406, 2273, 2612
SduI	GDGCHC	2 cut(s)	1986, 2409
SexAI	ACCWGGT	1 cut(s)	914
SfaNI	GCATC	3 cut(s)	634, 984, 1546
SfcI	CTRYAG	2 cut(s)	1165, 2492
SfuI	TTCGAA	2 cut(s)	988, 1452
SinI	GGWCC	3 cut(s)	1271, 2219, 2390
SmiMI	CAYNNNNRTG	3 cut(s)	1148, 1254, 1949
SmlI	CTYRAG	3 cut(s)	187, 1053, 2000
SmoI	CTYRAG	3 cut(s)	187, 1053, 2000
SphI	GCATGC	1 cut(s)	1117
SseBI	AGGCCT	1 cut(s)	2126
SsiI	CCGC	2 cut(s)	2238, 2572
SspMI	CTAG	6 cut(s)	966, 1019, 1913, 2069, 2235, 2300
StuI	AGGCCT	1 cut(s)	2126
StyD4I	CCNGG	5 cut(s)	914, 1285, 1404, 2271, 2610
StyI	CCWWGG	2 cut(s)	1078, 1895
TaaI	ACNGT	6 cut(s)	202, 930, 1344, 1654, 1834, 2020
TaiI	ACGT	1 cut(s)	1400
TaqI	TCGA	6 cut(s)	159, 988, 1227, 1329, 1452, 2061
TatI	WGTACW	3 cut(s)	1319, 2052, 2556
TauI	GCSGC	2 cut(s)	2241, 2574
TfiI	GAWTC	6 cut(s)	221, 569, 1357, 1414, 1909, 2563
Tru1I	TTAA	6 cut(s)	270, 576, 719, 1146, 2001, 2358
Tru9I	TTAA	6 cut(s)	270, 576, 719, 1146, 2001, 2358
TscAI	CASTG	4 cut(s)	309, 388, 1657, 2647
TseFI	GTSAC	6 cut(s)	502, 790, 1185, 1648, 1828, 2111
Tsp45I	GTSAC	6 cut(s)	502, 790, 1185, 1648, 1828, 2111
TspRI	CASTG	4 cut(s)	309, 388, 1657, 2647
Van91I	CCANNNNNTGG	1 cut(s)	1818
Vha464I	CTTAAG	1 cut(s)	2000
VpaK11BI	GGWCC	3 cut(s)	1271, 2219, 2390
VspI	ATTAAT	1 cut(s)	1146
XagI	CCTNNNNNAGG	1 cut(s)	2288
XapI	RAATTY	6 cut(s)	37, 355, 421, 1073, 2097, 2535
XbaI	TCTAGA	1 cut(s)	2068
XceI	RCATGY	4 cut(s)	850, 1117, 1714, 2193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1085
XmiI	GTMKAC	2 cut(s)	1539, 2485
XmnI	GAANNNNTTC	2 cut(s)	1697, 1860
XspI	CTAG	6 cut(s)	966, 1019, 1913, 2069, 2235, 2300
ZrmI	AGTACT	2 cut(s)	1321, 2054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.