Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Reverse (-)

65582306 .. 65585334

Gene Structure 3029 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG488000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGGGAGCTGTAGTTGATTTCACCTCTCGTGTGGGAAAAGAACAGAGAATAGCTATGGATTTGGCTATCCAAGACCTTCTTCACTCGAACTGCCTTACAGTAAATTTAGACCTCAGAGATTCACAGGGAAGTACAGCTAAATCAACTGCTGCTGCAATCAATCTTCTGAATGGCAAACAAGTTGAAGCCATCATTGGAACACTGACAATGCAAGAAGCAGCTCTTGTCTCTGAGATTGATAATCAAACCGCAAACTTCACCATTTTATCACTTGCTTCACCTGCCATAAACCCACCATCAGCCTCACTTCAAATGCCAAATTTTCTCCAAGTTGCAAATGACATTGTTATCCATATGCAATGCTTGGCAGCCTTAGTCGGTCATTTTCAATGGAGAAAGGTGACTGCAATTTATGAACAAAAGAGTGATTTTTCCTACAATTCTGGAATGATAACCCTCCTCTCCGATTCACTTAAATTAGTCAACTCAGAGATTGAGCACCACCAAGCTTTCCCAACCCTCTCTTCTCTCTCTGATCCAGATTCCTTTTTCGATGAAGAGCTGAAGAAGTTGAGGAACAAAAGCAACAGGGTTTTCATACTTACCCAGTTCTCTTTAAATTCAGCTGTTTTTCTCTTTGGAAAGGCAAAGGAAACGGGGATGATGGGCAAAGGCTATGTATGGATTGTCACAGATGAGATTGCAAGTCTTCTCGACTCTGTTGATTCTTCTATCAAGTACAATATGCAAGGTGTTATTGGTATTAAAACCAACTTCATAGAAATAAGTACAACCAACAATTTCGCGAAATTCAAAACCAGATTTCGCAGACTATATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGCCCTAGCATCTTTGCTCTTCGAACGTATGACGCAATGCAGGCCATGGCTCTAGCCATGAAATATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCAAATTCCAAGGTCTAAGTGGCATGATGGAGTTCAAGAATGGCATGCTATCACAACAACCAACCTTTCAAATCATTAATGTGTTTGGCAGAAGCTACAGTGAGATTGCATTCTGGTCGCCAAGCTTCGGTTTCTCAGAGGACATGAACAAACACCTTGATATGAAGGAGAGGACTAACCACAATTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGCTTACAAGCAGCTCCAAAGGGGTGGACTCTTGTTGATGGAGAGAGACCGTTGAAGATAGGGATTCCGGCGAGGGGTGCCTTCAATCAATTTGTGAAAGTCACATATGACCAGGACAAGAAGCAGACACACATCTCAGGGTTTTCAATTGATATCTTTGAAGCAGCTGTCAAAAACCTGCCTTATCAGTTCTCTTATGTGTTTGTTCCCTTCAATGGCACATATGATGAATTGGTGGAACAGGTCTACTACAAGGGTTTGGATGCAGCTGTTGGTGATATAGAAGTCATAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATATATAAGCTCTGGAATTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTGAAGGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCATGATCACTACGCACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGCGAACATGGGAAAAACTTTGAATTAGAAGGAATTGGGGCCATCCTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCTCGGCTGGTGCTGGCTCCATGGTTAGTAGTGATTCTAGTAGTAACAGCCACTTTCACAGCGAGCCTCACTTCCATGATGACCATCTCTCGAGTCCAGCCATCCGTGCTCAATGTGGAAACACTTAAGAAAGAAAATGGAACTGTAGGATGTAATGGCAACTCTTTTATTATTAGGTACCTGATCAATGTTCTAGAGTTCAGACCAGAAAACATCAAGAGAATTGCCTCCATAAGTGACTATCCAAAGGCCTTCCAGAATGGAGATATTCAAGCAGCTTTCTTCGTCGCCCCCCATGCTAAAGTCTTCCTGGCATGTTACTGCAAGGGCTATATGAAGACAGGTCCTATATACAATCCTAGCGGCTTTGCATTTGCTTTTCCAAAGGGGTCTCCTCTGGCCATTGAAATGTCAAGGGCAATCCTACATGTAAATGAGAAGAAGCAAGTAGAGCTATTAGAAAAACAAATGCTCTCCTCCTTTAACTGCTCCCCTGCACTGAACTTGAAAGATGGTCCAATTGGTTATGAGCCCTTTTCCGGCCTATTTCTAATTTCGGGTTTGGTTTGTGCATTTGCCCTATTGGTTACGAGTGGGCGTATGGCCGGTAGACATCTGCAGAATATGAGCAGCACACGAGCAATACTAACGAAAACAGGAATTCTAAGATGGGCTTTTATGTACTGGATTCAGAGCTGCAGAAAATCTCAAAAGCATTGCTCCACAACCTCCATCCTGGAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

840

Amino Acids

94.19

Weight (kDa)

8.4

Isoelectric Point (pI)

37.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	11 - 333	4e-09	Periplasmic binding protein
ANF_receptor	PF01094	17 - 352	5.7e-41	Receptor family ligand binding region
SBP_bac_3	PF00497	433 - 743	3.6e-09	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	435 - 518	6.7e-07	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	536 - 780	4.6e-19	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	289
Acc36I	ACCTGC	2 cut(s)	289, 1380
Acc65I	GGTACC	1 cut(s)	1953
AccB1I	GGYRCC	2 cut(s)	1271, 1953
AccB7I	CCANNNNNTGG	1 cut(s)	1719
AccI	GTMKAC	2 cut(s)	1440, 2386
AccII	CGCG	1 cut(s)	806
AciI	CCGC	2 cut(s)	249, 2139
AclWI	GGATC	1 cut(s)	530
AcoI	YGGCCR	3 cut(s)	1187, 2175, 2379
AcsI	RAATTY	7 cut(s)	103, 319, 619, 809, 977, 1536, 2436
AcuI	CTGAAG	4 cut(s)	584, 873, 1585, 1592
AfaI	GTAC	5 cut(s)	133, 740, 790, 1955, 2459
AfiI	CCNNNNNNNGG	5 cut(s)	1100, 1268, 1409, 1719, 2315
AflII	CTTAAG	1 cut(s)	1901
AflIII	ACRYGT	1 cut(s)	2203
AgeI	ACCGGT	1 cut(s)	1491
AjnI	CCWGG	4 cut(s)	1189, 1305, 2085, 2511
AjuI	GAANNNNNNNTTGG	6 cut(s)	63, 95, 177, 209, 508, 540
Alw21I	GWGCWC	2 cut(s)	501, 1887
Alw26I	GTCTC	4 cut(s)	232, 960, 1234, 2172
AlwI	GGATC	1 cut(s)	530
Ama87I	CYCGRG	1 cut(s)	1866
AoxI	GGCC	7 cut(s)	912, 1187, 1710, 2025, 2175, 2317, 2379
ApoI	RAATTY	7 cut(s)	103, 319, 619, 809, 977, 1536, 2436
ArsI	GACNNNNNNTTYG	2 cut(s)	938, 970
AseI	ATTAAT	1 cut(s)	1050
AsiGI	ACCGGT	1 cut(s)	1491
Asp700I	GAANNNNTTC	2 cut(s)	1598, 1761
Asp718I	GGTACC	1 cut(s)	1953
AspS9I	GGNCC	4 cut(s)	1175, 1710, 2120, 2291
AsuHPI	GGTGA	6 cut(s)	13, 250, 270, 412, 1481, 1723
AsuII	TTCGAA	1 cut(s)	892
AvaI	CYCGRG	1 cut(s)	1866
AvaII	GGWCC	3 cut(s)	1175, 2120, 2291
BalI	TGGCCA	2 cut(s)	1189, 2177
BanI	GGYRCC	2 cut(s)	1271, 1953
BanII	GRGCYC	2 cut(s)	1780, 2310
BauI	CACGAG	2 cut(s)	27, 2412
BbsI	GAAGAC	3 cut(s)	701, 2074, 2120
Bbv12I	GWGCWC	2 cut(s)	501, 1887
BcgI	CGANNNNNNTGC	2 cut(s)	1071, 1105
BciT130I	CCWGG	4 cut(s)	1191, 1307, 2087, 2513
BclI	TGATCA	2 cut(s)	1626, 1959
BcoDI	GTCTC	4 cut(s)	232, 960, 1234, 2172
BfaI	CTAG	6 cut(s)	870, 876, 923, 1814, 1970, 2136
BfmI	CTRYAG	5 cut(s)	9, 1069, 1920, 2393, 2473
BfrI	CTTAAG	1 cut(s)	1901
BfuAI	ACCTGC	2 cut(s)	289, 1380
Bme1390I	CCNGG	4 cut(s)	1191, 1307, 2087, 2513
Bme18I	GGWCC	3 cut(s)	1175, 2120, 2291
BmeT110I	CYCGRG	1 cut(s)	1866
BmgT120I	GGNCC	4 cut(s)	1175, 1710, 2120, 2291
BmiI	GGNNCC	5 cut(s)	1176, 1273, 1711, 1794, 1955
BmrFI	CCNGG	4 cut(s)	1191, 1307, 2087, 2513
BmrI	ACTGGG	1 cut(s)	601
BmsI	GCATC	2 cut(s)	888, 1447
BmuI	ACTGGG	1 cut(s)	601
BpiI	GAAGAC	3 cut(s)	701, 2074, 2120
Bpu14I	TTCGAA	1 cut(s)	892
BpuEI	CTTGAG	1 cut(s)	942
BsaBI	GATNNNNATC	1 cut(s)	1859
BsaI	GGTCTC	2 cut(s)	1234, 2172
BsaJI	CCNNGG	3 cut(s)	915, 982, 1796
BsaWI	WCCGGW	1 cut(s)	1491
BsaXI	ACNNNNNCTCC	1 cut(s)	27
Bsc4I	CCNNNNNNNGG	5 cut(s)	1100, 1268, 1409, 1719, 2315
Bse118I	RCCGGY	2 cut(s)	1491, 2381
Bse1I	ACTGG	3 cut(s)	607, 1190, 2465
Bse3DI	GCAATG	3 cut(s)	365, 912, 2491
Bse8I	GATNNNNATC	1 cut(s)	1859
BseBI	CCWGG	4 cut(s)	1191, 1307, 2087, 2513
BseDI	CCNNGG	3 cut(s)	915, 982, 1796
BseGI	GGATG	7 cut(s)	666, 1462, 1590, 1713, 1877, 1931, 2508
BseJI	GATNNNNATC	1 cut(s)	1859
BseLI	CCNNNNNNNGG	5 cut(s)	1100, 1268, 1409, 1719, 2315
BseMI	GCAATG	3 cut(s)	365, 912, 2491
BseMII	CTCAG	5 cut(s)	127, 222, 501, 1122, 1344
BseNI	ACTGG	3 cut(s)	607, 1190, 2465
BseRI	GAGGAG	3 cut(s)	449, 2160, 2242
BsgI	GTGCAG	1 cut(s)	2256
Bsh1236I	CGCG	1 cut(s)	806
BshFI	GGCC	7 cut(s)	914, 1189, 1712, 2027, 2177, 2319, 2381
BshNI	GGYRCC	2 cut(s)	1271, 1953
BshTI	ACCGGT	1 cut(s)	1491
BsiHKAI	GWGCWC	2 cut(s)	501, 1887
BsiHKCI	CYCGRG	1 cut(s)	1866
BsiSI	CCGG	4 cut(s)	1262, 1492, 2316, 2382
BslI	CCNNNNNNNGG	5 cut(s)	1100, 1268, 1409, 1719, 2315
BsmAI	GTCTC	4 cut(s)	232, 960, 1234, 2172
BsmI	GAATGC	3 cut(s)	1082, 1600, 1676
BsnI	GGCC	7 cut(s)	914, 1189, 1712, 2027, 2177, 2319, 2381
Bso31I	GGTCTC	2 cut(s)	1234, 2172
BsoBI	CYCGRG	1 cut(s)	1866
Bsp119I	TTCGAA	1 cut(s)	892
Bsp1286I	GDGCHC	4 cut(s)	501, 1780, 1887, 2310
Bsp143I	GATC	3 cut(s)	535, 1626, 1959
Bsp19I	CCATGG	2 cut(s)	915, 1796
Bsp68I	TCGCGA	1 cut(s)	806
BspACI	CCGC	2 cut(s)	249, 2139
BspANI	GGCC	7 cut(s)	914, 1189, 1712, 2027, 2177, 2319, 2381
BspCNI	CTCAG	5 cut(s)	126, 223, 500, 1121, 1343
BspFNI	CGCG	1 cut(s)	806
BspHI	TCATGA	2 cut(s)	1590, 1623
BspLI	GGNNCC	5 cut(s)	1176, 1273, 1711, 1794, 1955
BspMAI	CTGCAG	2 cut(s)	2397, 2477
BspMI	ACCTGC	2 cut(s)	289, 1380
BspPI	GGATC	1 cut(s)	530
BspQI	GCTCTTC	2 cut(s)	552, 894
BspT104I	TTCGAA	1 cut(s)	892
BspT107I	GGYRCC	2 cut(s)	1271, 1953
BspTI	CTTAAG	1 cut(s)	1901
BspTNI	GGTCTC	2 cut(s)	1234, 2172
BsrDI	GCAATG	3 cut(s)	365, 912, 2491
BsrFI	RCCGGY	2 cut(s)	1491, 2381
BsrI	ACTGG	3 cut(s)	607, 1190, 2465
BssAI	RCCGGY	2 cut(s)	1491, 2381
BssECI	CCNNGG	3 cut(s)	915, 982, 1796
BssMI	GATC	3 cut(s)	535, 1626, 1959
BssSI	CACGAG	2 cut(s)	27, 2412
BssT1I	CCWWGG	3 cut(s)	915, 982, 1796
Bst2BI	CACGAG	2 cut(s)	27, 2412
Bst2UI	CCWGG	4 cut(s)	1191, 1307, 2087, 2513
Bst4CI	ACNGT	6 cut(s)	100, 1073, 1245, 1555, 1735, 1921
Bst6I	CTCTTC	3 cut(s)	529, 552, 894
BstAFI	CTTAAG	1 cut(s)	1901
BstBI	TTCGAA	1 cut(s)	892
BstC8I	GCNNGC	4 cut(s)	912, 1019, 1791, 1840
BstDEI	CTNAG	8 cut(s)	113, 231, 373, 487, 989, 1108, 1330, 2441
BstDSI	CCRYGG	2 cut(s)	915, 1796
BstF5I	GGATG	7 cut(s)	666, 1462, 1590, 1713, 1877, 1931, 2508
BstFNI	CGCG	1 cut(s)	806
BstKTI	GATC	3 cut(s)	538, 1629, 1962
BstMAI	GTCTC	4 cut(s)	232, 960, 1234, 2172
BstMBI	GATC	3 cut(s)	535, 1626, 1959
BstMWI	GCNNNNNNNGC	7 cut(s)	281, 911, 1271, 1567, 1882, 2072, 2227
BstNI	CCWGG	4 cut(s)	1191, 1307, 2087, 2513
BstNSI	RCATGY	4 cut(s)	1021, 1615, 2094, 2207
BstSCI	CCNGG	4 cut(s)	1189, 1305, 2085, 2511
BstSFI	CTRYAG	5 cut(s)	9, 1069, 1920, 2393, 2473
BstUI	CGCG	1 cut(s)	806
BstV2I	GAAGAC	3 cut(s)	701, 2074, 2120
BstXI	CCANNNNNNTGG	2 cut(s)	1185, 1218
BsuRI	GGCC	7 cut(s)	914, 1189, 1712, 2027, 2177, 2319, 2381
BtgI	CCRYGG	2 cut(s)	915, 1796
BtsCI	GGATG	7 cut(s)	666, 1462, 1590, 1713, 1877, 1931, 2508
BtsIMutI	CAGTG	4 cut(s)	200, 1078, 1551, 2273
BtuMI	TCGCGA	1 cut(s)	806
BveI	ACCTGC	2 cut(s)	289, 1380
Cac8I	GCNNGC	4 cut(s)	912, 1019, 1791, 1840
CciI	TCATGA	2 cut(s)	1590, 1623
Cfr10I	RCCGGY	2 cut(s)	1491, 2381
Cfr13I	GGNCC	4 cut(s)	1175, 1710, 2120, 2291
CseI	GACGC	1 cut(s)	911
Csp6I	GTAC	5 cut(s)	132, 739, 789, 1954, 2458
CspAI	ACCGGT	1 cut(s)	1491
CviQI	GTAC	5 cut(s)	132, 739, 789, 1954, 2458
DdeI	CTNAG	8 cut(s)	113, 231, 373, 487, 989, 1108, 1330, 2441
DpnI	GATC	3 cut(s)	537, 1628, 1961
DpnII	GATC	3 cut(s)	535, 1626, 1959
DraI	TTTAAA	1 cut(s)	618
EaeI	YGGCCR	3 cut(s)	1187, 2175, 2379
Eam1104I	CTCTTC	3 cut(s)	529, 552, 894
EarI	CTCTTC	3 cut(s)	529, 552, 894
Eco130I	CCWWGG	3 cut(s)	915, 982, 1796
Eco147I	AGGCCT	1 cut(s)	2027
Eco24I	GRGCYC	2 cut(s)	1780, 2310
Eco31I	GGTCTC	2 cut(s)	1234, 2172
Eco32I	GATATC	1 cut(s)	1348
Eco47I	GGWCC	3 cut(s)	1175, 2120, 2291
Eco57I	CTGAAG	4 cut(s)	584, 873, 1585, 1592
Eco88I	CYCGRG	1 cut(s)	1866
EcoO109I	RGGNCCY	1 cut(s)	2120
EcoRI	GAATTC	2 cut(s)	1536, 2436
EcoRII	CCWGG	4 cut(s)	1189, 1305, 2085, 2511
EcoRV	GATATC	1 cut(s)	1348
EcoT14I	CCWWGG	3 cut(s)	915, 982, 1796
EcoT38I	GRGCYC	2 cut(s)	1780, 2310
ErhI	CCWWGG	3 cut(s)	915, 982, 1796
FalI	AAGNNNNNCTT	6 cut(s)	63, 95, 207, 239, 2434, 2466
FauNDI	CATATG	3 cut(s)	354, 1300, 1417
FbaI	TGATCA	2 cut(s)	1626, 1959
FblI	GTMKAC	2 cut(s)	1440, 2386
FokI	GGATG	7 cut(s)	673, 1469, 1597, 1700, 1864, 1938, 2495
FriOI	GRGCYC	2 cut(s)	1780, 2310
FspBI	CTAG	6 cut(s)	870, 876, 923, 1814, 1970, 2136
HaeIII	GGCC	7 cut(s)	914, 1189, 1712, 2027, 2177, 2319, 2381
HapII	CCGG	4 cut(s)	1262, 1492, 2316, 2382
HgaI	GACGC	1 cut(s)	911
HincII	GTYRAC	1 cut(s)	484
HindII	GTYRAC	1 cut(s)	484
HindIII	AAGCTT	2 cut(s)	507, 1096
HpaII	CCGG	4 cut(s)	1262, 1492, 2316, 2382
HphI	GGTGA	6 cut(s)	13, 250, 270, 412, 1481, 1723
Hpy166II	GTNNAC	5 cut(s)	484, 972, 1221, 1441, 2387
Hpy8I	GTNNAC	5 cut(s)	484, 972, 1221, 1441, 2387
Hpy99I	CGWCG	1 cut(s)	2066
HpyAV	CCTTC	8 cut(s)	86, 1132, 1285, 1414, 1567, 1609, 1694, 2038
HpyCH4III	ACNGT	6 cut(s)	100, 1073, 1245, 1555, 1735, 1921
HpyCH4IV	ACGT	1 cut(s)	896
HpyF10VI	GCNNNNNNNGC	7 cut(s)	281, 911, 1271, 1567, 1882, 2072, 2227
HpyF3I	CTNAG	8 cut(s)	113, 231, 373, 487, 989, 1108, 1330, 2441
HpySE526I	ACGT	1 cut(s)	896
KpnI	GGTACC	1 cut(s)	1957
Ksp22I	TGATCA	2 cut(s)	1626, 1959
Kzo9I	GATC	3 cut(s)	535, 1626, 1959
LguI	GCTCTTC	2 cut(s)	552, 894
LmnI	GCTCC	5 cut(s)	5, 1213, 1798, 2270, 2501
LweI	GCATC	2 cut(s)	888, 1447
MaeI	CTAG	6 cut(s)	870, 876, 923, 1814, 1970, 2136
MaeII	ACGT	1 cut(s)	896
MaeIII	GTNAC	9 cut(s)	400, 688, 1294, 1549, 1729, 1819, 2012, 2093, 2362
MalI	GATC	3 cut(s)	537, 1628, 1961
MboI	GATC	3 cut(s)	535, 1626, 1959
MfeI	CAATTG	2 cut(s)	1341, 2295
MhlI	GDGCHC	4 cut(s)	501, 1780, 1887, 2310
MlsI	TGGCCA	2 cut(s)	1189, 2177
MluNI	TGGCCA	2 cut(s)	1189, 2177
MlyI	GAGTC	3 cut(s)	710, 1216, 1878
Mox20I	TGGCCA	2 cut(s)	1189, 2177
MroXI	GAANNNNTTC	2 cut(s)	1598, 1761
MscI	TGGCCA	2 cut(s)	1189, 2177
MseI	TTAA	6 cut(s)	474, 617, 765, 1050, 1902, 2259
MslI	CAYNNNNRTG	5 cut(s)	1052, 1158, 1850, 2183, 2208
Msp20I	TGGCCA	2 cut(s)	1189, 2177
MspA1I	CMGCKG	3 cut(s)	626, 1361, 1463
MspCI	CTTAAG	1 cut(s)	1901
MspI	CCGG	4 cut(s)	1262, 1492, 2316, 2382
MspR9I	CCNGG	4 cut(s)	1191, 1307, 2087, 2513
MunI	CAATTG	2 cut(s)	1341, 2295
Mva1269I	GAATGC	3 cut(s)	1082, 1600, 1676
MvaI	CCWGG	4 cut(s)	1191, 1307, 2087, 2513
MvnI	CGCG	1 cut(s)	806
MwoI	GCNNNNNNNGC	7 cut(s)	281, 911, 1271, 1567, 1882, 2072, 2227
NcoI	CCATGG	2 cut(s)	915, 1796
NdeI	CATATG	3 cut(s)	354, 1300, 1417
NdeII	GATC	3 cut(s)	535, 1626, 1959
NlaIV	GGNNCC	5 cut(s)	1176, 1273, 1711, 1794, 1955
NmeAIII	GCCGAG	1 cut(s)	1759
NmuCI	GTSAC	6 cut(s)	400, 688, 1294, 1549, 1729, 2012
NruI	TCGCGA	1 cut(s)	806
NspI	RCATGY	4 cut(s)	1021, 1615, 2094, 2207
NspV	TTCGAA	1 cut(s)	892
PaeI	GCATGC	1 cut(s)	1021
PaeR7I	CTCGAG	1 cut(s)	1866
PagI	TCATGA	2 cut(s)	1590, 1623
PaqCI	CACCTGC	1 cut(s)	289
PceI	AGGCCT	1 cut(s)	2027
PciI	ACATGT	1 cut(s)	2203
PciSI	GCTCTTC	2 cut(s)	552, 894
PctI	GAATGC	3 cut(s)	1082, 1600, 1676
PdmI	GAANNNNTTC	2 cut(s)	1598, 1761
PfeI	GAWTC	7 cut(s)	119, 467, 542, 725, 1258, 1810, 2464
PflMI	CCANNNNNTGG	1 cut(s)	1719
PfoI	TCCNGGA	1 cut(s)	2511
PinAI	ACCGGT	1 cut(s)	1491
PleI	GAGTC	3 cut(s)	710, 1216, 1877
PpsI	GAGTC	3 cut(s)	710, 1216, 1877
PpuMI	RGGWCCY	1 cut(s)	2120
PscI	ACATGT	1 cut(s)	2203
PshBI	ATTAAT	1 cut(s)	1050
Psp5II	RGGWCCY	1 cut(s)	2120
Psp6I	CCWGG	4 cut(s)	1189, 1305, 2085, 2511
PspGI	CCWGG	4 cut(s)	1189, 1305, 2085, 2511
PspN4I	GGNNCC	5 cut(s)	1176, 1273, 1711, 1794, 1955
PspPI	GGNCC	4 cut(s)	1175, 1710, 2120, 2291
PspPPI	RGGWCCY	1 cut(s)	2120
PstI	CTGCAG	2 cut(s)	2397, 2477
PvuII	CAGCTG	3 cut(s)	626, 1361, 1463
RruI	TCGCGA	1 cut(s)	806
RsaI	GTAC	5 cut(s)	133, 740, 790, 1955, 2459
RsaNI	GTAC	5 cut(s)	132, 739, 789, 1954, 2458
RseI	CAYNNNNRTG	5 cut(s)	1052, 1158, 1850, 2183, 2208
SapI	GCTCTTC	2 cut(s)	552, 894
SaqAI	TTAA	6 cut(s)	474, 617, 765, 1050, 1902, 2259
Sau3AI	GATC	3 cut(s)	535, 1626, 1959
Sau96I	GGNCC	4 cut(s)	1175, 1710, 2120, 2291
SchI	GAGTC	3 cut(s)	710, 1216, 1878
ScrFI	CCNGG	4 cut(s)	1191, 1307, 2087, 2513
SduI	GDGCHC	4 cut(s)	501, 1780, 1887, 2310
SfaNI	GCATC	2 cut(s)	888, 1447
SfcI	CTRYAG	5 cut(s)	9, 1069, 1920, 2393, 2473
Sfr274I	CTCGAG	1 cut(s)	1866
SfuI	TTCGAA	1 cut(s)	892
SinI	GGWCC	3 cut(s)	1175, 2120, 2291
SlaI	CTCGAG	1 cut(s)	1866
SmiMI	CAYNNNNRTG	5 cut(s)	1052, 1158, 1850, 2183, 2208
SmlI	CTYRAG	3 cut(s)	957, 1866, 1901
SmoI	CTYRAG	3 cut(s)	957, 1866, 1901
SphI	GCATGC	1 cut(s)	1021
SseBI	AGGCCT	1 cut(s)	2027
SsiI	CCGC	2 cut(s)	249, 2139
SspMI	CTAG	6 cut(s)	870, 876, 923, 1814, 1970, 2136
StuI	AGGCCT	1 cut(s)	2027
StyD4I	CCNGG	4 cut(s)	1189, 1305, 2085, 2511
StyI	CCWWGG	3 cut(s)	915, 982, 1796
TaaI	ACNGT	6 cut(s)	100, 1073, 1245, 1555, 1735, 1921
TaiI	ACGT	1 cut(s)	899
TaqI	TCGA	5 cut(s)	86, 552, 714, 892, 1867
TaqII	GACCGA	1 cut(s)	368
TatI	WGTACW	4 cut(s)	131, 738, 788, 2457
TauI	GCSGC	1 cut(s)	2142
TfiI	GAWTC	7 cut(s)	119, 467, 542, 725, 1258, 1810, 2464
Tru1I	TTAA	6 cut(s)	474, 617, 765, 1050, 1902, 2259
Tru9I	TTAA	6 cut(s)	474, 617, 765, 1050, 1902, 2259
TscAI	CASTG	4 cut(s)	207, 1078, 1558, 2280
TseFI	GTSAC	6 cut(s)	400, 688, 1294, 1549, 1729, 2012
Tsp45I	GTSAC	6 cut(s)	400, 688, 1294, 1549, 1729, 2012
TspGWI	ACGGA	1 cut(s)	1870
TspRI	CASTG	4 cut(s)	207, 1078, 1558, 2280
Van91I	CCANNNNNTGG	1 cut(s)	1719
Vha464I	CTTAAG	1 cut(s)	1901
VpaK11BI	GGWCC	3 cut(s)	1175, 2120, 2291
VspI	ATTAAT	1 cut(s)	1050
XapI	RAATTY	7 cut(s)	103, 319, 619, 809, 977, 1536, 2436
XbaI	TCTAGA	1 cut(s)	1969
XceI	RCATGY	4 cut(s)	1021, 1615, 2094, 2207
XcmI	CCANNNNNNNNNTGG	1 cut(s)	989
XhoI	CTCGAG	1 cut(s)	1866
XmiI	GTMKAC	2 cut(s)	1440, 2386
XmnI	GAANNNNTTC	2 cut(s)	1598, 1761
XspI	CTAG	6 cut(s)	870, 876, 923, 1814, 1970, 2136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.