Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Reverse (-)

66166030 .. 66168741

Gene Structure 2712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27693

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGTCTTGGGGTATCTTGGTTTTGCTGCTGCTGGTGAATTCAGCCCTGGCCAATGGAAGAGGGGACAGATGTCAAAAAACCCAACAACAGAGAGTTGCAAGAATGGGAGCTGTAGTTGATTTCACCTCTCGTGTGGGAAAAGAACAGAGAATAGCTATGGATTTGGCTATCCAAGACCTTCTTCACTCGAACTGCCTTACAGTAAATTTAGACCTCAGAGATTCACAGGGAAGTACAGCTAAATCAACTGCTGCTGCAATCAATCTTCTGAATGGCAAACAAGTTGAAGCCATCATTGGAACACTGACAATGCAAGAAGCAGCTCTTGTCTCTGAGATTGAAAATCAAACCGCAAACTTCACCATTTTATCACTTGCTTCACCTGCCATAAACCCACCATCAGCCTCACTTCAAATGCCAAATTTTCTCCAAGTTGCAAATGACATTGTTATCCATATGCAATGCTTGGCAGCCTTAGTCGGTCATTTTCAATGGAGAAAGGTGACTGCAATTTATGAACAAAAGAGTGATTTTTCCTACAATTCTGGAATGATAACCCTCCTCTCCGATTCACTTAAATTAGTCAACTCAGAGATTGAGCACCACCAAGCTTTCCCAACCCTCTCTTCTCTCTCTGATCCAGATTCCTTTTTCGATGAAGAGCTGAAGAAGTTGAGGAACAAAAGCAACAGGGTTTTCATACTTACCCAGTTCTCTTTAAATTCAGCTATTTTTCTCTTTGGAAAGGCAAAGGAAACGGGGATGATGGGCAAAGGCTATGTATGGATTGTCACAGATGAGATTGCAAGTCTTCTTGACTCTGTTGATTCTTCTATCAAGTACAATATGCAAGGTGTTATTGGTATTAAAACCAACTTCATAGAAATAAATACAACCAACAATTTCGCGAAATTCAAAACAAGATTTCGCAGACTATATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGCCCTAGCATCTTTGCTCTTCGAACGTATGACGCAATGCAGGCCATGGCCCTAGCCATGAAATATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCAAATTCCAAGGTCTAAGTGGCATGATGGAGTTCAAGAATGGCATGCTATCACAACAACCAACCTTTCAAATCATTAATGTGTTTGGCAGAAGCTACAGCGAGATTGCATTCTGGTCACCAAGCTTCGGTTTCTCAGACGACATGAACAAACACCTTGATATGAAGGAGAGGACTAATCACAATTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGTATACAAGCAGCTCCAAAGGGGTGGAGTACTCTTGTCGATGGAGAGAGACCGTTGAAGATAGGGATTCCGGCAAGGGGTGCCTTCAATCAATTTGTGAAAGTAACGTATGACCAGGACAAGAATCAGACACACATCTCAGGGTTTTCAATTGATATGTTTGAAGCAGCTGTGAAAAACCTGCCTTATCAGTTGCCTTATGTGTTTGTTCCCTTCAATGGCTCATATGATGAATTGGTGGAACAGGTCTACTACAAGGGCTTGGATGCAGCTGTTGGTGATATAGAAGTCATAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATACATAAGCTCTGGACTTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTGAAGGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCATGATCACTACACACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGTGAACATGGGCAAAACTTTGAATTAGAGGGTATTGGGGCCATCCTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCTCGGCTGGTGCTGGCTCCATGGTTAGTAGTGATTCTAGTAGTAACAGCCACTTTCACAGCGAGCCTCACTTCCATGATGACCATCTCTCGAGTCCAGCCATCTGTGCTCAATGTGGAAACACTTAAGAAAGAAAATGGAACTGTTGGATGTAATGGCAACTCTTTTATTATTAGGTACCTGATCAATGTTCTAGCGTTCAGACCAGAAAACATCAAGAGAATTTCCTCCATAAGTGACTACCCAAAGGCCTTCCAGAATGGAGATATTCAAGCAGCTTTCTTTGTCGCCCCCCATGCTAAAGTCTTCCTGGCATGTTACTGCAAGGGCTATATGAAGACAGGTCCTATATACAAGCCTAGCGGCTTTGCATTTGTGCGTATCTCTACCTTCTTATCATTTTCTTTAGACATTTTATCGAACACATTGTTTGCGAGTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

774

Amino Acids

86.83

Weight (kDa)

7.95

Isoelectric Point (pI)

32.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	42 - 367	2.2e-09	Periplasmic binding protein
ANF_receptor	PF01094	51 - 386	3.8e-41	Receptor family ligand binding region
SBP_bac_3	PF00497	467 - 557	5.7e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	571 - 681	3e-17	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	391
Acc36I	ACCTGC	2 cut(s)	391, 1485
Acc65I	GGTACC	1 cut(s)	2058
AccB1I	GGYRCC	2 cut(s)	1376, 2058
AccB7I	CCANNNNNTGG	1 cut(s)	1824
AccI	GTMKAC	2 cut(s)	1300, 1545
AccII	CGCG	1 cut(s)	908
AciI	CCGC	2 cut(s)	351, 2244
AclWI	GGATC	1 cut(s)	632
AcoI	YGGCCR	2 cut(s)	48, 1289
AcsI	RAATTY	7 cut(s)	37, 205, 421, 721, 911, 1079, 2103
AcuI	CTGAAG	5 cut(s)	686, 975, 1628, 1690, 1697
AfaI	GTAC	4 cut(s)	235, 842, 1327, 2060
AfiI	CCNNNNNNNGG	4 cut(s)	1202, 1373, 1514, 1824
AflII	CTTAAG	1 cut(s)	2006
AgeI	ACCGGT	1 cut(s)	1596
AjnI	CCWGG	4 cut(s)	45, 1291, 1410, 2190
AjuI	GAANNNNNNNTTGG	6 cut(s)	165, 197, 279, 311, 610, 642
Alw21I	GWGCWC	2 cut(s)	603, 1992
Alw26I	GTCTC	3 cut(s)	334, 1062, 1339
AlwI	GGATC	1 cut(s)	632
Ama87I	CYCGRG	1 cut(s)	1971
AoxI	GGCC	6 cut(s)	48, 1014, 1020, 1289, 1815, 2130
ApoI	RAATTY	7 cut(s)	37, 205, 421, 721, 911, 1079, 2103
ArsI	GACNNNNNNTTYG	2 cut(s)	1040, 1072
AseI	ATTAAT	1 cut(s)	1152
AsiGI	ACCGGT	1 cut(s)	1596
Asp700I	GAANNNNTTC	2 cut(s)	1703, 1866
Asp718I	GGTACC	1 cut(s)	2058
AspS9I	GGNCC	4 cut(s)	1021, 1277, 1815, 2225
AsuHPI	GGTGA	8 cut(s)	46, 115, 352, 372, 514, 1185, 1586, 1828
AsuII	TTCGAA	1 cut(s)	994
AvaI	CYCGRG	1 cut(s)	1971
AvaII	GGWCC	2 cut(s)	1277, 2225
BalI	TGGCCA	2 cut(s)	50, 1291
BanI	GGYRCC	2 cut(s)	1376, 2058
BanII	GRGCYC	1 cut(s)	1885
BauI	CACGAG	1 cut(s)	129
BbsI	GAAGAC	3 cut(s)	803, 2179, 2225
Bbv12I	GWGCWC	2 cut(s)	603, 1992
BccI	CCATC	9 cut(s)	299, 406, 760, 1096, 1331, 1642, 1826, 1973, 1990
BciT130I	CCWGG	4 cut(s)	47, 1293, 1412, 2192
BclI	TGATCA	2 cut(s)	1731, 2064
BcoDI	GTCTC	3 cut(s)	334, 1062, 1339
BfaI	CTAG	6 cut(s)	972, 978, 1025, 1919, 2075, 2241
BfmI	CTRYAG	2 cut(s)	111, 1171
BfrI	CTTAAG	1 cut(s)	2006
BfuAI	ACCTGC	2 cut(s)	391, 1485
BmcAI	AGTACT	1 cut(s)	1327
Bme1390I	CCNGG	4 cut(s)	47, 1293, 1412, 2192
Bme18I	GGWCC	2 cut(s)	1277, 2225
BmeT110I	CYCGRG	1 cut(s)	1971
BmgT120I	GGNCC	4 cut(s)	1021, 1277, 1815, 2225
BmiI	GGNNCC	5 cut(s)	1278, 1378, 1816, 1899, 2060
BmrFI	CCNGG	4 cut(s)	47, 1293, 1412, 2192
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	2 cut(s)	990, 1552
BmuI	ACTGGG	1 cut(s)	703
BoxI	GACNNNNGTC	1 cut(s)	69
BpiI	GAAGAC	3 cut(s)	803, 2179, 2225
Bpu14I	TTCGAA	1 cut(s)	994
BpuEI	CTTGAG	1 cut(s)	1044
BsaBI	GATNNNNATC	1 cut(s)	1964
BsaI	GGTCTC	1 cut(s)	1339
BsaJI	CCNNGG	4 cut(s)	45, 1017, 1084, 1901
BsaWI	WCCGGW	1 cut(s)	1596
BsaXI	ACNNNNNCTCC	2 cut(s)	99, 129
Bsc4I	CCNNNNNNNGG	4 cut(s)	1202, 1373, 1514, 1824
Bse118I	RCCGGY	1 cut(s)	1596
Bse1I	ACTGG	2 cut(s)	709, 1292
Bse3DI	GCAATG	2 cut(s)	467, 1014
Bse8I	GATNNNNATC	1 cut(s)	1964
BseBI	CCWGG	4 cut(s)	47, 1293, 1412, 2192
BseDI	CCNNGG	4 cut(s)	45, 1017, 1084, 1901
BseGI	GGATG	5 cut(s)	768, 1567, 1695, 1818, 2036
BseJI	GATNNNNATC	1 cut(s)	1964
BseLI	CCNNNNNNNGG	4 cut(s)	1202, 1373, 1514, 1824
BseMI	GCAATG	2 cut(s)	467, 1014
BseMII	CTCAG	5 cut(s)	229, 324, 603, 1224, 1449
BseNI	ACTGG	2 cut(s)	709, 1292
BseRI	GAGGAG	1 cut(s)	551
Bsh1236I	CGCG	1 cut(s)	908
BshFI	GGCC	6 cut(s)	50, 1016, 1022, 1291, 1817, 2132
BshNI	GGYRCC	2 cut(s)	1376, 2058
BshTI	ACCGGT	1 cut(s)	1596
BsiHKAI	GWGCWC	2 cut(s)	603, 1992
BsiHKCI	CYCGRG	1 cut(s)	1971
BsiSI	CCGG	2 cut(s)	1367, 1597
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	4 cut(s)	1202, 1373, 1514, 1824
BsmAI	GTCTC	3 cut(s)	334, 1062, 1339
BsmFI	GGGAC	1 cut(s)	77
BsmI	GAATGC	2 cut(s)	1184, 1705
BsnI	GGCC	6 cut(s)	50, 1016, 1022, 1291, 1817, 2132
Bso31I	GGTCTC	1 cut(s)	1339
BsoBI	CYCGRG	1 cut(s)	1971
Bsp119I	TTCGAA	1 cut(s)	994
Bsp1286I	GDGCHC	3 cut(s)	603, 1885, 1992
Bsp143I	GATC	3 cut(s)	637, 1731, 2064
Bsp19I	CCATGG	2 cut(s)	1017, 1901
Bsp68I	TCGCGA	1 cut(s)	908
BspACI	CCGC	2 cut(s)	351, 2244
BspANI	GGCC	6 cut(s)	50, 1016, 1022, 1291, 1817, 2132
BspCNI	CTCAG	5 cut(s)	228, 325, 602, 1223, 1448
BspFNI	CGCG	1 cut(s)	908
BspHI	TCATGA	2 cut(s)	1695, 1728
BspLI	GGNNCC	5 cut(s)	1278, 1378, 1816, 1899, 2060
BspMI	ACCTGC	2 cut(s)	391, 1485
BspPI	GGATC	1 cut(s)	632
BspQI	GCTCTTC	2 cut(s)	654, 996
BspT104I	TTCGAA	1 cut(s)	994
BspT107I	GGYRCC	2 cut(s)	1376, 2058
BspTI	CTTAAG	1 cut(s)	2006
BspTNI	GGTCTC	1 cut(s)	1339
BsrDI	GCAATG	2 cut(s)	467, 1014
BsrFI	RCCGGY	1 cut(s)	1596
BsrI	ACTGG	2 cut(s)	709, 1292
BssAI	RCCGGY	1 cut(s)	1596
BssECI	CCNNGG	4 cut(s)	45, 1017, 1084, 1901
BssMI	GATC	3 cut(s)	637, 1731, 2064
BssNAI	GTATAC	1 cut(s)	1301
BssSI	CACGAG	1 cut(s)	129
BssT1I	CCWWGG	3 cut(s)	1017, 1084, 1901
Bst1107I	GTATAC	1 cut(s)	1301
Bst2BI	CACGAG	1 cut(s)	129
Bst2UI	CCWGG	4 cut(s)	47, 1293, 1412, 2192
Bst4CI	ACNGT	5 cut(s)	202, 1350, 1660, 1840, 2026
Bst6I	CTCTTC	4 cut(s)	52, 631, 654, 996
BstAFI	CTTAAG	1 cut(s)	2006
BstAPI	GCANNNNNTGC	1 cut(s)	1376
BstBI	TTCGAA	1 cut(s)	994
BstC8I	GCNNGC	4 cut(s)	1014, 1121, 1896, 1945
BstDEI	CTNAG	7 cut(s)	215, 333, 475, 589, 1091, 1210, 1435
BstDSI	CCRYGG	2 cut(s)	1017, 1901
BstEII	GGTNACC	1 cut(s)	1191
BstF5I	GGATG	5 cut(s)	768, 1567, 1695, 1818, 2036
BstFNI	CGCG	1 cut(s)	908
BstKTI	GATC	3 cut(s)	640, 1734, 2067
BstMAI	GTCTC	3 cut(s)	334, 1062, 1339
BstMBI	GATC	3 cut(s)	637, 1731, 2064
BstMWI	GCNNNNNNNGC	6 cut(s)	383, 1013, 1376, 1672, 1987, 2177
BstNI	CCWGG	4 cut(s)	47, 1293, 1412, 2192
BstNSI	RCATGY	3 cut(s)	1123, 1720, 2199
BstPAI	GACNNNNGTC	1 cut(s)	69
BstPI	GGTNACC	1 cut(s)	1191
BstSCI	CCNGG	4 cut(s)	45, 1291, 1410, 2190
BstSFI	CTRYAG	2 cut(s)	111, 1171
BstUI	CGCG	1 cut(s)	908
BstV2I	GAAGAC	3 cut(s)	803, 2179, 2225
BstXI	CCANNNNNNTGG	2 cut(s)	1287, 1320
BstZ17I	GTATAC	1 cut(s)	1301
BsuRI	GGCC	6 cut(s)	50, 1016, 1022, 1291, 1817, 2132
BtgI	CCRYGG	2 cut(s)	1017, 1901
BtsCI	GGATG	5 cut(s)	768, 1567, 1695, 1818, 2036
BtsIMutI	CAGTG	2 cut(s)	302, 1656
BtuMI	TCGCGA	1 cut(s)	908
BveI	ACCTGC	2 cut(s)	391, 1485
Cac8I	GCNNGC	4 cut(s)	1014, 1121, 1896, 1945
CciI	TCATGA	2 cut(s)	1695, 1728
Cfr10I	RCCGGY	1 cut(s)	1596
Cfr13I	GGNCC	4 cut(s)	1021, 1277, 1815, 2225
CseI	GACGC	1 cut(s)	1013
Csp6I	GTAC	4 cut(s)	234, 841, 1326, 2059
CspAI	ACCGGT	1 cut(s)	1596
CviQI	GTAC	4 cut(s)	234, 841, 1326, 2059
DdeI	CTNAG	7 cut(s)	215, 333, 475, 589, 1091, 1210, 1435
DpnI	GATC	3 cut(s)	639, 1733, 2066
DpnII	GATC	3 cut(s)	637, 1731, 2064
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	2 cut(s)	48, 1289
Eam1104I	CTCTTC	4 cut(s)	52, 631, 654, 996
EarI	CTCTTC	4 cut(s)	52, 631, 654, 996
Eco130I	CCWWGG	3 cut(s)	1017, 1084, 1901
Eco147I	AGGCCT	1 cut(s)	2132
Eco24I	GRGCYC	1 cut(s)	1885
Eco31I	GGTCTC	1 cut(s)	1339
Eco47I	GGWCC	2 cut(s)	1277, 2225
Eco57I	CTGAAG	5 cut(s)	686, 975, 1628, 1690, 1697
Eco88I	CYCGRG	1 cut(s)	1971
Eco91I	GGTNACC	1 cut(s)	1191
EcoO109I	RGGNCCY	1 cut(s)	2225
EcoO65I	GGTNACC	1 cut(s)	1191
EcoRI	GAATTC	1 cut(s)	37
EcoRII	CCWGG	4 cut(s)	45, 1291, 1410, 2190
EcoT14I	CCWWGG	3 cut(s)	1017, 1084, 1901
EcoT38I	GRGCYC	1 cut(s)	1885
ErhI	CCWWGG	3 cut(s)	1017, 1084, 1901
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 309, 341
FaqI	GGGAC	1 cut(s)	77
FauNDI	CATATG	2 cut(s)	456, 1522
FbaI	TGATCA	2 cut(s)	1731, 2064
FblI	GTMKAC	2 cut(s)	1300, 1545
FokI	GGATG	5 cut(s)	775, 1574, 1702, 1805, 2043
FriOI	GRGCYC	1 cut(s)	1885
FspBI	CTAG	6 cut(s)	972, 978, 1025, 1919, 2075, 2241
HaeIII	GGCC	6 cut(s)	50, 1016, 1022, 1291, 1817, 2132
HapII	CCGG	2 cut(s)	1367, 1597
HgaI	GACGC	1 cut(s)	1013
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HindIII	AAGCTT	2 cut(s)	609, 1198
HpaII	CCGG	2 cut(s)	1367, 1597
HphI	GGTGA	8 cut(s)	46, 115, 352, 372, 514, 1185, 1586, 1828
Hpy166II	GTNNAC	5 cut(s)	586, 1074, 1301, 1546, 1781
Hpy8I	GTNNAC	5 cut(s)	586, 1074, 1301, 1546, 1781
HpyAV	CCTTC	8 cut(s)	188, 1234, 1390, 1519, 1672, 1714, 2143, 2281
HpyCH4III	ACNGT	5 cut(s)	202, 1350, 1660, 1840, 2026
HpyCH4IV	ACGT	2 cut(s)	998, 1403
HpyF10VI	GCNNNNNNNGC	6 cut(s)	383, 1013, 1376, 1672, 1987, 2177
HpyF3I	CTNAG	7 cut(s)	215, 333, 475, 589, 1091, 1210, 1435
HpySE526I	ACGT	2 cut(s)	998, 1403
KpnI	GGTACC	1 cut(s)	2062
Ksp22I	TGATCA	2 cut(s)	1731, 2064
Kzo9I	GATC	3 cut(s)	637, 1731, 2064
LguI	GCTCTTC	2 cut(s)	654, 996
LmnI	GCTCC	3 cut(s)	107, 1315, 1903
LweI	GCATC	2 cut(s)	990, 1552
MaeI	CTAG	6 cut(s)	972, 978, 1025, 1919, 2075, 2241
MaeII	ACGT	2 cut(s)	998, 1403
MaeIII	GTNAC	9 cut(s)	502, 790, 1191, 1399, 1654, 1834, 1924, 2117, 2198
MalI	GATC	3 cut(s)	639, 1733, 2066
MboI	GATC	3 cut(s)	637, 1731, 2064
MfeI	CAATTG	1 cut(s)	1446
MhlI	GDGCHC	3 cut(s)	603, 1885, 1992
MlsI	TGGCCA	2 cut(s)	50, 1291
MluNI	TGGCCA	2 cut(s)	50, 1291
MlyI	GAGTC	2 cut(s)	812, 1983
MmeI	TCCRAC	1 cut(s)	2008
Mox20I	TGGCCA	2 cut(s)	50, 1291
MroXI	GAANNNNTTC	2 cut(s)	1703, 1866
MscI	TGGCCA	2 cut(s)	50, 1291
MseI	TTAA	5 cut(s)	576, 719, 867, 1152, 2007
MslI	CAYNNNNRTG	3 cut(s)	1154, 1260, 1955
Msp20I	TGGCCA	2 cut(s)	50, 1291
MspA1I	CMGCKG	2 cut(s)	1466, 1568
MspCI	CTTAAG	1 cut(s)	2006
MspI	CCGG	2 cut(s)	1367, 1597
MspR9I	CCNGG	4 cut(s)	47, 1293, 1412, 2192
MunI	CAATTG	1 cut(s)	1446
Mva1269I	GAATGC	2 cut(s)	1184, 1705
MvaI	CCWGG	4 cut(s)	47, 1293, 1412, 2192
MvnI	CGCG	1 cut(s)	908
MwoI	GCNNNNNNNGC	6 cut(s)	383, 1013, 1376, 1672, 1987, 2177
NcoI	CCATGG	2 cut(s)	1017, 1901
NdeI	CATATG	2 cut(s)	456, 1522
NdeII	GATC	3 cut(s)	637, 1731, 2064
NlaIV	GGNNCC	5 cut(s)	1278, 1378, 1816, 1899, 2060
NmeAIII	GCCGAG	1 cut(s)	1864
NmuCI	GTSAC	6 cut(s)	502, 790, 1191, 1654, 1834, 2117
NruI	TCGCGA	1 cut(s)	908
NspI	RCATGY	3 cut(s)	1123, 1720, 2199
NspV	TTCGAA	1 cut(s)	994
PaeI	GCATGC	1 cut(s)	1123
PaeR7I	CTCGAG	1 cut(s)	1971
PagI	TCATGA	2 cut(s)	1695, 1728
PaqCI	CACCTGC	1 cut(s)	391
PceI	AGGCCT	1 cut(s)	2132
PciSI	GCTCTTC	2 cut(s)	654, 996
PctI	GAATGC	2 cut(s)	1184, 1705
PdmI	GAANNNNTTC	2 cut(s)	1703, 1866
PfeI	GAWTC	7 cut(s)	221, 569, 644, 827, 1363, 1420, 1915
PflMI	CCANNNNNTGG	1 cut(s)	1824
PinAI	ACCGGT	1 cut(s)	1596
PleI	GAGTC	2 cut(s)	812, 1982
PpsI	GAGTC	2 cut(s)	812, 1982
PpuMI	RGGWCCY	1 cut(s)	2225
PshAI	GACNNNNGTC	1 cut(s)	69
PshBI	ATTAAT	1 cut(s)	1152
Psp5II	RGGWCCY	1 cut(s)	2225
Psp6I	CCWGG	4 cut(s)	45, 1291, 1410, 2190
PspEI	GGTNACC	1 cut(s)	1191
PspGI	CCWGG	4 cut(s)	45, 1291, 1410, 2190
PspN4I	GGNNCC	5 cut(s)	1278, 1378, 1816, 1899, 2060
PspPI	GGNCC	4 cut(s)	1021, 1277, 1815, 2225
PspPPI	RGGWCCY	1 cut(s)	2225
PvuII	CAGCTG	2 cut(s)	1466, 1568
RruI	TCGCGA	1 cut(s)	908
RsaI	GTAC	4 cut(s)	235, 842, 1327, 2060
RsaNI	GTAC	4 cut(s)	234, 841, 1326, 2059
RseI	CAYNNNNRTG	3 cut(s)	1154, 1260, 1955
SapI	GCTCTTC	2 cut(s)	654, 996
SaqAI	TTAA	5 cut(s)	576, 719, 867, 1152, 2007
Sau3AI	GATC	3 cut(s)	637, 1731, 2064
Sau96I	GGNCC	4 cut(s)	1021, 1277, 1815, 2225
ScaI	AGTACT	1 cut(s)	1327
SchI	GAGTC	2 cut(s)	812, 1983
ScrFI	CCNGG	4 cut(s)	47, 1293, 1412, 2192
SduI	GDGCHC	3 cut(s)	603, 1885, 1992
SfaNI	GCATC	2 cut(s)	990, 1552
SfcI	CTRYAG	2 cut(s)	111, 1171
Sfr274I	CTCGAG	1 cut(s)	1971
SfuI	TTCGAA	1 cut(s)	994
SinI	GGWCC	2 cut(s)	1277, 2225
SlaI	CTCGAG	1 cut(s)	1971
SmiMI	CAYNNNNRTG	3 cut(s)	1154, 1260, 1955
SmlI	CTYRAG	3 cut(s)	1059, 1971, 2006
SmoI	CTYRAG	3 cut(s)	1059, 1971, 2006
SphI	GCATGC	1 cut(s)	1123
SseBI	AGGCCT	1 cut(s)	2132
SsiI	CCGC	2 cut(s)	351, 2244
SspMI	CTAG	6 cut(s)	972, 978, 1025, 1919, 2075, 2241
StuI	AGGCCT	1 cut(s)	2132
StyD4I	CCNGG	4 cut(s)	45, 1291, 1410, 2190
StyI	CCWWGG	3 cut(s)	1017, 1084, 1901
TaaI	ACNGT	5 cut(s)	202, 1350, 1660, 1840, 2026
TaiI	ACGT	2 cut(s)	1001, 1406
TaqI	TCGA	6 cut(s)	188, 654, 994, 1335, 1972, 2300
TaqII	GACCGA	1 cut(s)	470
TatI	WGTACW	3 cut(s)	233, 840, 1325
TauI	GCSGC	1 cut(s)	2247
TfiI	GAWTC	7 cut(s)	221, 569, 644, 827, 1363, 1420, 1915
Tru1I	TTAA	5 cut(s)	576, 719, 867, 1152, 2007
Tru9I	TTAA	5 cut(s)	576, 719, 867, 1152, 2007
TscAI	CASTG	2 cut(s)	309, 1663
TseFI	GTSAC	6 cut(s)	502, 790, 1191, 1654, 1834, 2117
Tsp45I	GTSAC	6 cut(s)	502, 790, 1191, 1654, 1834, 2117
TspRI	CASTG	2 cut(s)	309, 1663
Van91I	CCANNNNNTGG	1 cut(s)	1824
Vha464I	CTTAAG	1 cut(s)	2006
VpaK11BI	GGWCC	2 cut(s)	1277, 2225
VspI	ATTAAT	1 cut(s)	1152
XapI	RAATTY	7 cut(s)	37, 205, 421, 721, 911, 1079, 2103
XceI	RCATGY	3 cut(s)	1123, 1720, 2199
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1091
XhoI	CTCGAG	1 cut(s)	1971
XmiI	GTMKAC	2 cut(s)	1300, 1545
XmnI	GAANNNNTTC	2 cut(s)	1703, 1866
XspI	CTAG	6 cut(s)	972, 978, 1025, 1919, 2075, 2241
ZrmI	AGTACT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.