Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0005524

Physical Location & Seq

Genomic Coordinates Reverse (-)

64010105 .. 64013569

Gene Structure 3465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG474100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGCAATGCTTGGCAGCCTTAGTTGGTCATTTCCAATGGAGAAAGGTGACTGCAATTTATGAACAAAACATTGACTTTTCCTCCAATTCTGGAATGATAACCCTCCTCTCTGATTCACTTAAATTAGTCAACTCAGAGATCGAACACCACCAAGCTTTCCCAACCCTCTCTTCTCTCTCTGATCCGGATGCCTTTTTTGATGAAGAGCTGAAGAAGTTGAGGAGCAAGAGCAACAGGGTTTTCATAGTTACCCAGTTCTCTTTGAATACAGCTGTTTTTCTCTTTGAAAAGGCAAAGGAAATGGGGATGATGGGCAAAGGCTATGTGTGGATTGTCACAGATGAAATTGCGAGCCTTCTTGACTCTGTTGACTCTTCTATCAAGTACAACATGCAAGGTGTGATTGGTATCAAAACCAATTTCATAGAAACAACCCACAATTTCACCAAGTTCAAAACCAGGTTTCGCAGACTGTATGGACTGCAATACCCTGAAGAAGAAGAAAACTCTAGTCCAAGCATCTTTGCTCTTCGAACATATGACGCAATGCACGCCATTGCTCTAGCCATGAAAAATGCTACCTCAAAACATTTGTCTCAAGAAATTGTGTCCACCGAATTCCAAGGTCTAAGTGGCATGATGGAGTTCAAGAATGGCATGCTATCACAACAACCAACCATTCAAATCATTAATGTGTTTGGCAGAAGCTACAGCGAGATTGCATTCTGGTCACCAAGCTTCGGTTTCTCAGAGGACATGAACAAACACCTTGATATGAAGGAGAGGACTAACCACAGTTATGTTCAAGTTTTGGGTCCAATCAACTGGCCAGGTGGCTTACAAGCAGCTCCAAAGGGGTGGACCCTTGTTGATGGACAGAGACCATTGAAGATAGGGATTCCGGCGAGGGGTGCCTTCAATCAATTTGTGAAAGTAACATATGACCAGGACAAGAATCAGACACACATCTCAGGGTTTTCAATTGATATGTTTGAAGCAGCTGTCAAAAACCTGCCTTATCAGTTGCCTTATGTGTTTGTTCCCTTCAATGGCTCATATGATGAATTGGTGGAACAGGTCTACTACAAGGGCTTGGATGCAGCTGTTGGTGATATAGAAGTCATAGCTGACCGGTATCATTATGTTGAGTTCTCACAACCATATATAAGCTCTGGACTTCAGATGGTAGTCACTGTAAAGCCAGATAAGCTAAACGAAAAATGGATGTTCATGAATGCCTTCAGCAAAAGCATGTGGTTGCTCATGATCACTACACACCTTTCTGTATGCTTTGTTGTCTGGTTTATTGAATGCGAACATGGGCAAAACTTTGAATTAGAGGGCATTGGGGCCATCCTGTGGTTCTCTGTCACCGTCTTATTCTTCGTGCAAAGAGAACGAGTTCAGAGTAATTGGGCAAGGCTGGTGCTGGCTCCATGGTTAGTAGTGATTCTAGTAGTAACAGCCACTTTCACAGCAAGCCTCACTTCCATGATGACCATCTCTCGAGTCCAGCCATCTGTACTCAATGTGGAAACACTTAAGAAAGAAAATGGGAATGTTGGATGTAATGGAAACTCTTTTATTGTAAAGTACTTGATCGATGTTCTAGAGTTCAGACCAGAAAACATCAAGAGAATTTCCTCCATAAGTGACTACCCAAAGGCCTTCCAGAATGGAGATATTCAAGCAGCTTTCTTCGTCGCCCCCCATGCTAAAGTCTTTCTCGCATGTTACTGCAAGGGCTATATGAAAGCAGGTCCTATATACAAGCCTAGCGGCTTTGCATTTGTTTTTCCAAAGGGATCTCCCCTGGCCATTGACCTGTCAAAGGCAATCCTAGATGTAAACGAGAAGAAGCAAGTGGAGCTATTAGAAAAACAAATGCTCTCCTCCTTTAACTGCTCCCCTTCACTCAACTTGAACGATGGTCCAATAGGTTATGAGCCCTTTTCCGGCCTATTTCTAATTTCAGGTTTGGTTTGTGCATTCGCTGTATTGGTTACGAGTGGGCGTATCGCCGGTAGACATCTGCAGAATATGAGCTGCATACGAGCAATACTAATGAAAACAGGAATTCTCAGATGGGTTTTTATGTACTTGATTCAGAGCTGCAGAAAATCTCAAAAGCATTGCTCCACAACCTCCATCCTGGAAACTTGCTCTATAAGGAACATGAGCAGTGGTGGTGATATAGTGATTATCACGCACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

738

Amino Acids

83.19

Weight (kDa)

7.87

Isoelectric Point (pI)

38.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	2 - 232	2.8e-31	Receptor family ligand binding region
SBP_bac_3	PF00497	312 - 626	6.9e-09	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	416 - 660	1.7e-19	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005524)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34350 FvH4_2g34370
malus_domestica	MD15G1082100.v1.1
prunus_persica	Prupe.1G434800_v2.0.a1
pyrus_communis	pycom15g07690
rosa_chinensis	RchiOBHm_Chr6g0308001 RchiOBHm_Chr6g0308011
rosa_laevigata	RLG00000010676 RLG00000010677 RLG00000010678 RLG00000010679
rosa_multiflora	Rmu_sc0006237.1_g000009 Rmu_sc0006237.1_g000010
rosa_roxburghii	Rroxscaffold_7G00160680 Rroxscaffold_7G00160690
rosa_rugosa	Rorug06G0362900 Rorug06G0363000
rosa_samantha	Rh6BG482500 Rh6BG482700 Rh6CG487800 Rh6CG488000 Rh6DG474100 Rh6DG474200
rosa_wichuraiana	Rw6G041170 Rw6G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1020, 1748
AccB1I	GGYRCC	1 cut(s)	911
AccB7I	CCANNNNNTGG	1 cut(s)	1359
AccI	GTMKAC	2 cut(s)	1080, 2026
AccIII	TCCGGA	1 cut(s)	184
AciI	CCGC	1 cut(s)	1779
AclWI	GGATC	2 cut(s)	176, 1813
AcoI	YGGCCR	2 cut(s)	827, 1815
AcsI	RAATTY	3 cut(s)	617, 1638, 2076
AcuI	CTGAAG	4 cut(s)	230, 513, 1163, 1225
AfaI	GTAC	4 cut(s)	386, 1524, 1595, 2099
AfiI	CCNNNNNNNGG	6 cut(s)	740, 908, 1049, 1359, 1831, 1955
AflII	CTTAAG	1 cut(s)	1541
AgeI	ACCGGT	1 cut(s)	1131
AjnI	CCWGG	5 cut(s)	458, 829, 945, 1812, 2151
AjuI	GAANNNNNNNTTGG	2 cut(s)	154, 186
Alw26I	GTCTC	2 cut(s)	600, 874
AlwI	GGATC	2 cut(s)	176, 1813
Ama87I	CYCGRG	1 cut(s)	1506
Aor13HI	TCCGGA	1 cut(s)	184
AoxI	GGCC	5 cut(s)	827, 1350, 1665, 1815, 1957
ApeKI	GCWGC	7 cut(s)	14, 845, 998, 1100, 1691, 2046, 2112
ApoI	RAATTY	3 cut(s)	617, 1638, 2076
ArsI	GACNNNNNNTTYG	2 cut(s)	578, 610
AseI	ATTAAT	1 cut(s)	690
AsiGI	ACCGGT	1 cut(s)	1131
Asp700I	GAANNNNTTC	2 cut(s)	1238, 1401
AspS9I	GGNCC	5 cut(s)	815, 861, 1350, 1760, 1931
AsuHPI	GGTGA	6 cut(s)	58, 436, 723, 1121, 1363, 2201
AsuII	TTCGAA	1 cut(s)	532
AvaI	CYCGRG	1 cut(s)	1506
AvaII	GGWCC	4 cut(s)	815, 861, 1760, 1931
BalI	TGGCCA	2 cut(s)	829, 1817
BanI	GGYRCC	1 cut(s)	911
BanII	GRGCYC	1 cut(s)	1950
BbvI	GCAGC	7 cut(s)	26, 857, 1010, 1112, 1703, 2033, 2099
BciT130I	CCWGG	5 cut(s)	460, 831, 947, 1814, 2153
BclI	TGATCA	1 cut(s)	1266
BcoDI	GTCTC	2 cut(s)	600, 874
BfaI	CTAG	6 cut(s)	510, 563, 1454, 1610, 1776, 1841
BfmI	CTRYAG	3 cut(s)	709, 2033, 2113
BfrI	CTTAAG	1 cut(s)	1541
BfuAI	ACCTGC	2 cut(s)	1020, 1748
BisI	GCNGC	8 cut(s)	15, 846, 999, 1101, 1692, 1780, 2047, 2113
BlsI	GCNGC	8 cut(s)	16, 847, 1000, 1102, 1693, 1781, 2048, 2114
BmcAI	AGTACT	1 cut(s)	1595
Bme1390I	CCNGG	5 cut(s)	460, 831, 947, 1814, 2153
Bme18I	GGWCC	4 cut(s)	815, 861, 1760, 1931
BmeT110I	CYCGRG	1 cut(s)	1506
BmgT120I	GGNCC	5 cut(s)	815, 861, 1350, 1760, 1931
BmiI	GGNNCC	5 cut(s)	816, 863, 913, 1351, 1434
BmrFI	CCNGG	5 cut(s)	460, 831, 947, 1814, 2153
BmrI	ACTGGG	1 cut(s)	247
BmsI	GCATC	3 cut(s)	178, 528, 1087
BmuI	ACTGGG	1 cut(s)	247
Bpu14I	TTCGAA	1 cut(s)	532
BpuEI	CTTGAG	1 cut(s)	582
Bsa29I	ATCGAT	1 cut(s)	1602
BsaBI	GATNNNNATC	2 cut(s)	407, 1499
BsaI	GGTCTC	1 cut(s)	874
BsaJI	CCNNGG	3 cut(s)	622, 1436, 1812
BsaWI	WCCGGW	2 cut(s)	184, 1131
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	6 cut(s)	740, 908, 1049, 1359, 1831, 1955
Bse118I	RCCGGY	2 cut(s)	1131, 2021
Bse1I	ACTGG	3 cut(s)	253, 830, 2212
Bse3DI	GCAATG	4 cut(s)	11, 552, 555, 2131
Bse8I	GATNNNNATC	2 cut(s)	407, 1499
BseAI	TCCGGA	1 cut(s)	184
BseBI	CCWGG	5 cut(s)	460, 831, 947, 1814, 2153
BseCI	ATCGAT	1 cut(s)	1602
BseDI	CCNNGG	3 cut(s)	622, 1436, 1812
BseGI	GGATG	7 cut(s)	193, 312, 1102, 1230, 1353, 1571, 2148
BseJI	GATNNNNATC	2 cut(s)	407, 1499
BseLI	CCNNNNNNNGG	6 cut(s)	740, 908, 1049, 1359, 1831, 1955
BseMI	GCAATG	4 cut(s)	11, 552, 555, 2131
BseMII	CTCAG	4 cut(s)	147, 762, 984, 2095
BseNI	ACTGG	3 cut(s)	253, 830, 2212
BseRI	GAGGAG	3 cut(s)	95, 235, 1882
BseXI	GCAGC	7 cut(s)	26, 857, 1010, 1112, 1703, 2033, 2099
BshFI	GGCC	5 cut(s)	829, 1352, 1667, 1817, 1959
BshNI	GGYRCC	1 cut(s)	911
BshTI	ACCGGT	1 cut(s)	1131
BshVI	ATCGAT	1 cut(s)	1602
BsiHKCI	CYCGRG	1 cut(s)	1506
BsiSI	CCGG	5 cut(s)	185, 902, 1132, 1956, 2022
BslI	CCNNNNNNNGG	6 cut(s)	740, 908, 1049, 1359, 1831, 1955
BsmAI	GTCTC	2 cut(s)	600, 874
BsmI	GAATGC	4 cut(s)	722, 1240, 1316, 1988
BsnI	GGCC	5 cut(s)	829, 1352, 1667, 1817, 1959
Bso31I	GGTCTC	1 cut(s)	874
BsoBI	CYCGRG	1 cut(s)	1506
Bsp119I	TTCGAA	1 cut(s)	532
Bsp1286I	GDGCHC	1 cut(s)	1950
Bsp13I	TCCGGA	1 cut(s)	184
Bsp143I	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
Bsp19I	CCATGG	1 cut(s)	1436
BspACI	CCGC	1 cut(s)	1779
BspANI	GGCC	5 cut(s)	829, 1352, 1667, 1817, 1959
BspCNI	CTCAG	4 cut(s)	146, 761, 983, 2094
BspDI	ATCGAT	1 cut(s)	1602
BspEI	TCCGGA	1 cut(s)	184
BspHI	TCATGA	2 cut(s)	1230, 1263
BspLI	GGNNCC	5 cut(s)	816, 863, 913, 1351, 1434
BspMAI	CTGCAG	2 cut(s)	2037, 2117
BspMI	ACCTGC	2 cut(s)	1020, 1748
BspPI	GGATC	2 cut(s)	176, 1813
BspQI	GCTCTTC	2 cut(s)	198, 534
BspT104I	TTCGAA	1 cut(s)	532
BspT107I	GGYRCC	1 cut(s)	911
BspTI	CTTAAG	1 cut(s)	1541
BspTNI	GGTCTC	1 cut(s)	874
BsrDI	GCAATG	4 cut(s)	11, 552, 555, 2131
BsrFI	RCCGGY	2 cut(s)	1131, 2021
BsrI	ACTGG	3 cut(s)	253, 830, 2212
BssAI	RCCGGY	2 cut(s)	1131, 2021
BssECI	CCNNGG	3 cut(s)	622, 1436, 1812
BssMI	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
BssT1I	CCWWGG	2 cut(s)	622, 1436
Bst2UI	CCWGG	5 cut(s)	460, 831, 947, 1814, 2153
Bst4CI	ACNGT	4 cut(s)	474, 797, 1195, 1375
Bst6I	CTCTTC	4 cut(s)	175, 198, 379, 534
BstAFI	CTTAAG	1 cut(s)	1541
BstBI	TTCGAA	1 cut(s)	532
BstC8I	GCNNGC	5 cut(s)	352, 552, 659, 1431, 1480
BstDEI	CTNAG	6 cut(s)	19, 133, 629, 748, 970, 2081
BstDSI	CCRYGG	1 cut(s)	1436
BstEII	GGTNACC	1 cut(s)	729
BstENI	CCTNNNNNAGG	1 cut(s)	1829
BstF5I	GGATG	7 cut(s)	193, 312, 1102, 1230, 1353, 1571, 2148
BstKTI	GATC	5 cut(s)	141, 184, 1269, 1602, 1808
BstMAI	GTCTC	2 cut(s)	600, 874
BstMBI	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
BstMWI	GCNNNNNNNGC	5 cut(s)	551, 911, 1207, 1712, 1867
BstNI	CCWGG	5 cut(s)	460, 831, 947, 1814, 2153
BstNSI	RCATGY	4 cut(s)	394, 661, 1255, 1734
BstPI	GGTNACC	1 cut(s)	729
BstSCI	CCNGG	5 cut(s)	458, 829, 945, 1812, 2151
BstSFI	CTRYAG	3 cut(s)	709, 2033, 2113
BstV1I	GCAGC	7 cut(s)	26, 857, 1010, 1112, 1703, 2033, 2099
BstX2I	RGATCY	1 cut(s)	1805
BstXI	CCANNNNNNTGG	2 cut(s)	825, 858
BstYI	RGATCY	1 cut(s)	1805
Bsu15I	ATCGAT	1 cut(s)	1602
BsuRI	GGCC	5 cut(s)	829, 1352, 1667, 1817, 1959
BsuTUI	ATCGAT	1 cut(s)	1602
BtgI	CCRYGG	1 cut(s)	1436
BtsCI	GGATG	7 cut(s)	193, 312, 1102, 1230, 1353, 1571, 2148
BtsI	GCAGTG	1 cut(s)	2188
BtsIMutI	CAGTG	2 cut(s)	1191, 2188
BveI	ACCTGC	2 cut(s)	1020, 1748
Cac8I	GCNNGC	5 cut(s)	352, 552, 659, 1431, 1480
CciI	TCATGA	2 cut(s)	1230, 1263
Cfr10I	RCCGGY	2 cut(s)	1131, 2021
Cfr13I	GGNCC	5 cut(s)	815, 861, 1350, 1760, 1931
ClaI	ATCGAT	1 cut(s)	1602
CseI	GACGC	1 cut(s)	551
CsiI	ACCWGGT	1 cut(s)	458
Csp6I	GTAC	4 cut(s)	385, 1523, 1594, 2098
CspAI	ACCGGT	1 cut(s)	1131
CviQI	GTAC	4 cut(s)	385, 1523, 1594, 2098
DdeI	CTNAG	6 cut(s)	19, 133, 629, 748, 970, 2081
DpnI	GATC	5 cut(s)	140, 183, 1268, 1601, 1807
DpnII	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
EaeI	YGGCCR	2 cut(s)	827, 1815
Eam1104I	CTCTTC	4 cut(s)	175, 198, 379, 534
EarI	CTCTTC	4 cut(s)	175, 198, 379, 534
Eco130I	CCWWGG	2 cut(s)	622, 1436
Eco147I	AGGCCT	1 cut(s)	1667
Eco24I	GRGCYC	1 cut(s)	1950
Eco31I	GGTCTC	1 cut(s)	874
Eco47I	GGWCC	4 cut(s)	815, 861, 1760, 1931
Eco57I	CTGAAG	4 cut(s)	230, 513, 1163, 1225
Eco88I	CYCGRG	1 cut(s)	1506
Eco91I	GGTNACC	1 cut(s)	729
EcoNI	CCTNNNNNAGG	1 cut(s)	1829
EcoO109I	RGGNCCY	1 cut(s)	1760
EcoO65I	GGTNACC	1 cut(s)	729
EcoRI	GAATTC	2 cut(s)	617, 2076
EcoRII	CCWGG	5 cut(s)	458, 829, 945, 1812, 2151
EcoT14I	CCWWGG	2 cut(s)	622, 1436
EcoT38I	GRGCYC	1 cut(s)	1950
ErhI	CCWWGG	2 cut(s)	622, 1436
FalI	AAGNNNNNCTT	2 cut(s)	1471, 1503
FauNDI	CATATG	3 cut(s)	538, 940, 1057
FbaI	TGATCA	1 cut(s)	1266
FblI	GTMKAC	2 cut(s)	1080, 2026
Fnu4HI	GCNGC	8 cut(s)	15, 846, 999, 1101, 1692, 1780, 2047, 2113
FokI	GGATG	7 cut(s)	200, 319, 1109, 1237, 1340, 1578, 2135
FriOI	GRGCYC	1 cut(s)	1950
Fsp4HI	GCNGC	8 cut(s)	15, 846, 999, 1101, 1692, 1780, 2047, 2113
FspBI	CTAG	6 cut(s)	510, 563, 1454, 1610, 1776, 1841
GluI	GCNGC	8 cut(s)	15, 846, 999, 1101, 1692, 1780, 2047, 2113
HaeIII	GGCC	5 cut(s)	829, 1352, 1667, 1817, 1959
HapII	CCGG	5 cut(s)	185, 902, 1132, 1956, 2022
HgaI	GACGC	1 cut(s)	551
HincII	GTYRAC	2 cut(s)	130, 370
HindII	GTYRAC	2 cut(s)	130, 370
HindIII	AAGCTT	2 cut(s)	153, 736
HinfI	GANTC	8 cut(s)	113, 362, 371, 898, 955, 1450, 1509, 2104
HpaII	CCGG	5 cut(s)	185, 902, 1132, 1956, 2022
HphI	GGTGA	6 cut(s)	58, 436, 723, 1121, 1363, 2201
Hpy166II	GTNNAC	7 cut(s)	130, 370, 612, 861, 1081, 1849, 2027
Hpy8I	GTNNAC	7 cut(s)	130, 370, 612, 861, 1081, 1849, 2027
Hpy99I	CGWCG	1 cut(s)	1706
HpyAV	CCTTC	7 cut(s)	365, 772, 925, 1054, 1249, 1678, 1920
HpyCH4III	ACNGT	4 cut(s)	474, 797, 1195, 1375
HpyF10VI	GCNNNNNNNGC	5 cut(s)	551, 911, 1207, 1712, 1867
HpyF3I	CTNAG	6 cut(s)	19, 133, 629, 748, 970, 2081
Kpn2I	TCCGGA	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	1266
Kzo9I	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
LguI	GCTCTTC	2 cut(s)	198, 534
LmnI	GCTCC	6 cut(s)	222, 853, 1438, 1867, 1910, 2141
Lsp1109I	GCAGC	7 cut(s)	26, 857, 1010, 1112, 1703, 2033, 2099
LweI	GCATC	3 cut(s)	178, 528, 1087
MabI	ACCWGGT	1 cut(s)	458
MaeI	CTAG	6 cut(s)	510, 563, 1454, 1610, 1776, 1841
MalI	GATC	5 cut(s)	140, 183, 1268, 1601, 1807
MboI	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
MfeI	CAATTG	1 cut(s)	981
MflI	RGATCY	1 cut(s)	1805
MhlI	GDGCHC	1 cut(s)	1950
MlsI	TGGCCA	2 cut(s)	829, 1817
MluNI	TGGCCA	2 cut(s)	829, 1817
MlyI	GAGTC	3 cut(s)	356, 365, 1518
MmeI	TCCRAC	1 cut(s)	1543
Mox20I	TGGCCA	2 cut(s)	829, 1817
MroI	TCCGGA	1 cut(s)	184
MroXI	GAANNNNTTC	2 cut(s)	1238, 1401
MscI	TGGCCA	2 cut(s)	829, 1817
MseI	TTAA	4 cut(s)	120, 690, 1542, 1899
MslI	CAYNNNNRTG	3 cut(s)	692, 798, 1490
Msp20I	TGGCCA	2 cut(s)	829, 1817
MspA1I	CMGCKG	3 cut(s)	272, 1001, 1103
MspCI	CTTAAG	1 cut(s)	1541
MspI	CCGG	5 cut(s)	185, 902, 1132, 1956, 2022
MspR9I	CCNGG	5 cut(s)	460, 831, 947, 1814, 2153
MunI	CAATTG	1 cut(s)	981
Mva1269I	GAATGC	4 cut(s)	722, 1240, 1316, 1988
MvaI	CCWGG	5 cut(s)	460, 831, 947, 1814, 2153
MwoI	GCNNNNNNNGC	5 cut(s)	551, 911, 1207, 1712, 1867
NcoI	CCATGG	1 cut(s)	1436
NdeI	CATATG	3 cut(s)	538, 940, 1057
NdeII	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
NlaIV	GGNNCC	5 cut(s)	816, 863, 913, 1351, 1434
NmuCI	GTSAC	6 cut(s)	46, 334, 729, 1189, 1369, 1652
NspI	RCATGY	4 cut(s)	394, 661, 1255, 1734
NspV	TTCGAA	1 cut(s)	532
PaeI	GCATGC	1 cut(s)	661
PaeR7I	CTCGAG	1 cut(s)	1506
PagI	TCATGA	2 cut(s)	1230, 1263
PceI	AGGCCT	1 cut(s)	1667
PciSI	GCTCTTC	2 cut(s)	198, 534
PctI	GAATGC	4 cut(s)	722, 1240, 1316, 1988
PdmI	GAANNNNTTC	2 cut(s)	1238, 1401
PfeI	GAWTC	5 cut(s)	113, 898, 955, 1450, 2104
PflMI	CCANNNNNTGG	1 cut(s)	1359
PfoI	TCCNGGA	1 cut(s)	2151
PinAI	ACCGGT	1 cut(s)	1131
PkrI	GCNGC	8 cut(s)	16, 847, 1000, 1102, 1693, 1781, 2048, 2114
PleI	GAGTC	3 cut(s)	356, 365, 1517
PpsI	GAGTC	3 cut(s)	356, 365, 1517
PpuMI	RGGWCCY	1 cut(s)	1760
PshBI	ATTAAT	1 cut(s)	690
Psp5II	RGGWCCY	1 cut(s)	1760
Psp6I	CCWGG	5 cut(s)	458, 829, 945, 1812, 2151
PspEI	GGTNACC	1 cut(s)	729
PspGI	CCWGG	5 cut(s)	458, 829, 945, 1812, 2151
PspN4I	GGNNCC	5 cut(s)	816, 863, 913, 1351, 1434
PspPI	GGNCC	5 cut(s)	815, 861, 1350, 1760, 1931
PspPPI	RGGWCCY	1 cut(s)	1760
PstI	CTGCAG	2 cut(s)	2037, 2117
PsuI	RGATCY	1 cut(s)	1805
PvuII	CAGCTG	3 cut(s)	272, 1001, 1103
RsaI	GTAC	4 cut(s)	386, 1524, 1595, 2099
RsaNI	GTAC	4 cut(s)	385, 1523, 1594, 2098
RseI	CAYNNNNRTG	3 cut(s)	692, 798, 1490
SapI	GCTCTTC	2 cut(s)	198, 534
SaqAI	TTAA	4 cut(s)	120, 690, 1542, 1899
SatI	GCNGC	8 cut(s)	15, 846, 999, 1101, 1692, 1780, 2047, 2113
Sau3AI	GATC	5 cut(s)	138, 181, 1266, 1599, 1805
Sau96I	GGNCC	5 cut(s)	815, 861, 1350, 1760, 1931
ScaI	AGTACT	1 cut(s)	1595
SchI	GAGTC	3 cut(s)	356, 365, 1518
ScrFI	CCNGG	5 cut(s)	460, 831, 947, 1814, 2153
SduI	GDGCHC	1 cut(s)	1950
SexAI	ACCWGGT	1 cut(s)	458
SfaNI	GCATC	3 cut(s)	178, 528, 1087
SfcI	CTRYAG	3 cut(s)	709, 2033, 2113
Sfr274I	CTCGAG	1 cut(s)	1506
SfuI	TTCGAA	1 cut(s)	532
SinI	GGWCC	4 cut(s)	815, 861, 1760, 1931
SlaI	CTCGAG	1 cut(s)	1506
SmiMI	CAYNNNNRTG	3 cut(s)	692, 798, 1490
SmlI	CTYRAG	3 cut(s)	597, 1506, 1541
SmoI	CTYRAG	3 cut(s)	597, 1506, 1541
SphI	GCATGC	1 cut(s)	661
SseBI	AGGCCT	1 cut(s)	1667
SsiI	CCGC	1 cut(s)	1779
SspMI	CTAG	6 cut(s)	510, 563, 1454, 1610, 1776, 1841
StuI	AGGCCT	1 cut(s)	1667
StyD4I	CCNGG	5 cut(s)	458, 829, 945, 1812, 2151
StyI	CCWWGG	2 cut(s)	622, 1436
TaaI	ACNGT	4 cut(s)	474, 797, 1195, 1375
TaqI	TCGA	4 cut(s)	141, 532, 1507, 1602
TatI	WGTACW	4 cut(s)	384, 1522, 1593, 2097
TauI	GCSGC	1 cut(s)	1782
TfiI	GAWTC	5 cut(s)	113, 898, 955, 1450, 2104
Tru1I	TTAA	4 cut(s)	120, 690, 1542, 1899
Tru9I	TTAA	4 cut(s)	120, 690, 1542, 1899
TscAI	CASTG	2 cut(s)	1198, 2188
TseFI	GTSAC	6 cut(s)	46, 334, 729, 1189, 1369, 1652
TseI	GCWGC	7 cut(s)	14, 845, 998, 1100, 1691, 2046, 2112
Tsp45I	GTSAC	6 cut(s)	46, 334, 729, 1189, 1369, 1652
TspRI	CASTG	2 cut(s)	1198, 2188
Van91I	CCANNNNNTGG	1 cut(s)	1359
Vha464I	CTTAAG	1 cut(s)	1541
VpaK11BI	GGWCC	4 cut(s)	815, 861, 1760, 1931
VspI	ATTAAT	1 cut(s)	690
XagI	CCTNNNNNAGG	1 cut(s)	1829
XapI	RAATTY	3 cut(s)	617, 1638, 2076
XbaI	TCTAGA	1 cut(s)	1609
XceI	RCATGY	4 cut(s)	394, 661, 1255, 1734
XcmI	CCANNNNNNNNNTGG	1 cut(s)	629
XhoI	CTCGAG	1 cut(s)	1506
XmiI	GTMKAC	2 cut(s)	1080, 2026
XmnI	GAANNNNTTC	2 cut(s)	1238, 1401
XspI	CTAG	6 cut(s)	510, 563, 1454, 1610, 1776, 1841
ZrmI	AGTACT	1 cut(s)	1595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.